AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa ssp. caerulea / MsaG044526

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG044526 MtrunA17_Chr4g0053431 94.265 279 7 3 1 278 1 271 0.0 521
MsaG044526 MtrunA17_Chr5g0401731 52.711 332 85 9 1 277 11 325 2.47e-105 309
MsaG044526 MtrunA17_Chr6g0454921 79.091 110 23 0 1 110 11 120 3.38e-62 195
MsaG044526 MtrunA17_Chr3g0133601 78.095 105 23 0 1 105 33 137 1.36e-56 181
MsaG044526 MtrunA17_Chr5g0437321 74.257 101 26 0 2 102 16 116 1.12e-49 165
MsaG044526 MtrunA17_Chr4g0008551 70.874 103 30 0 3 105 36 138 1.93e-49 166
MsaG044526 MtrunA17_Chr4g0042501 58.416 101 42 0 5 105 105 205 6.95e-38 138
MsaG044526 MtrunA17_Chr3g0139671 53.211 109 51 0 4 112 84 192 1.14e-37 141
MsaG044526 MtrunA17_Chr5g0417621 57.426 101 43 0 5 105 134 234 1.68e-37 137
MsaG044526 MtrunA17_Chr6g0460671 52.679 112 53 0 4 115 98 209 1.97e-37 135
MsaG044526 MtrunA17_Chr1g0157731 53.211 109 51 0 4 112 90 198 2.14e-37 140
MsaG044526 MtrunA17_Chr7g0238631 55.882 102 45 0 4 105 112 213 3.89e-36 135
MsaG044526 MtrunA17_Chr7g0254261 55.446 101 45 0 5 105 89 189 3.98e-35 129
MsaG044526 MtrunA17_Chr3g0117511 52.252 111 53 0 1 111 179 289 1.95e-34 129
MsaG044526 MtrunA17_Chr4g0058991 52.885 104 49 0 4 107 208 311 3.41e-34 129
MsaG044526 MtrunA17_Chr6g0480581 53.000 100 47 0 5 104 4 103 9.01e-34 123
MsaG044526 MtrunA17_Chr3g0125801 55.446 101 45 0 5 105 16 116 1.21e-33 124
MsaG044526 MtrunA17_Chr5g0417821 56.863 102 43 1 5 105 9 110 1.54e-33 123
MsaG044526 MtrunA17_Chr5g0429661 50.962 104 51 0 4 107 121 224 6.34e-33 123
MsaG044526 MtrunA17_Chr4g0013361 56.863 102 42 2 5 104 12 113 4.00e-32 120
MsaG044526 MtrunA17_Chr3g0103281 50.000 106 52 1 5 109 14 119 3.51e-31 118
MsaG044526 MtrunA17_Chr7g0228531 51.429 105 50 1 1 105 216 319 4.01e-31 120
MsaG044526 MtrunA17_Chr8g0334881 54.902 102 44 2 5 104 12 113 1.95e-30 116
MsaG044526 MtrunA17_Chr7g0228481 50.943 106 49 2 1 106 216 318 2.81e-30 117
MsaG044526 MtrunA17_Chr5g0397841 50.000 98 49 0 2 99 107 204 9.08e-30 117
MsaG044526 MtrunA17_Chr4g0022901 42.143 140 78 2 5 143 15 152 9.82e-30 113
MsaG044526 MtrunA17_Chr3g0099131 51.961 102 48 1 5 105 43 144 1.07e-29 117
MsaG044526 MtrunA17_Chr5g0395281 52.830 106 41 2 5 105 14 115 1.26e-29 113
MsaG044526 MtrunA17_Chr5g0410961 50.000 102 50 1 5 105 14 115 1.37e-29 114
MsaG044526 MtrunA17_Chr4g0022911 49.515 103 51 1 5 106 15 117 5.51e-29 111
MsaG044526 MtrunA17_Chr2g0328771 46.512 129 56 2 5 120 22 150 7.98e-29 112
MsaG044526 MtrunA17_Chr1g0152011 47.541 122 59 3 5 124 14 132 8.45e-29 112
MsaG044526 MtrunA17_Chr2g0330041 45.312 128 63 2 5 131 14 135 9.31e-29 113
MsaG044526 MtrunA17_Chr6g0453471 42.336 137 77 2 5 140 14 149 9.34e-29 112
MsaG044526 MtrunA17_Chr7g0270891 53.922 102 46 1 5 105 14 115 1.04e-28 112
MsaG044526 MtrunA17_Chr3g0088461 54.902 102 45 1 5 105 24 125 1.16e-28 112
MsaG044526 MtrunA17_Chr1g0180391 50.962 104 50 1 5 107 21 124 1.19e-28 109
MsaG044526 MtrunA17_Chr1g0193801 52.941 102 47 1 5 105 14 115 1.77e-28 112
MsaG044526 MtrunA17_Chr1g0193371 52.941 102 47 1 5 105 14 115 2.53e-28 111
MsaG044526 MtrunA17_Chr7g0275911 50.980 102 49 1 5 105 14 115 2.79e-28 108
MsaG044526 MtrunA17_Chr3g0115821 49.057 106 45 2 5 105 14 115 2.87e-28 110
MsaG044526 MtrunA17_Chr4g0022931 49.020 102 51 1 5 105 15 116 2.95e-28 109
MsaG044526 MtrunA17_Chr7g0264641 47.664 107 54 2 5 109 14 120 3.02e-28 109
MsaG044526 MtrunA17_Chr1g0203411 47.222 108 56 1 5 111 14 121 4.07e-28 109
MsaG044526 MtrunA17_Chr8g0385321 49.593 123 52 3 5 123 14 130 4.58e-28 109
MsaG044526 MtrunA17_Chr4g0028311 49.533 107 52 2 5 109 14 120 4.73e-28 109
MsaG044526 MtrunA17_Chr3g0135311 50.485 103 49 2 5 105 14 116 5.22e-28 110
MsaG044526 MtrunA17_Chr2g0323351 49.505 101 50 1 5 104 14 114 5.84e-28 108
MsaG044526 MtrunA17_Chr4g0058631 52.941 102 47 1 5 105 14 115 7.15e-28 110
MsaG044526 MtrunA17_Chr8g0342541 49.550 111 53 2 5 112 14 124 7.29e-28 109
MsaG044526 MtrunA17_Chr1g0211161 50.980 102 49 1 5 105 15 116 8.18e-28 107
MsaG044526 MtrunA17_Chr4g0032401 50.943 106 51 1 5 109 19 124 8.60e-28 109
MsaG044526 MtrunA17_Chr7g0274581 48.182 110 48 2 1 105 10 115 9.09e-28 106
MsaG044526 MtrunA17_Chr1g0167691 48.113 106 46 2 5 105 14 115 1.14e-27 107
MsaG044526 MtrunA17_Chr4g0039971 50.000 106 44 2 5 105 15 116 1.37e-27 109
MsaG044526 MtrunA17_Chr1g0168661 46.667 105 55 1 5 108 23 127 1.37e-27 107
MsaG044526 MtrunA17_Chr3g0117091 51.961 102 48 1 5 105 14 115 1.44e-27 108
MsaG044526 MtrunA17_Chr1g0167661 49.057 106 45 2 5 105 14 115 1.61e-27 107
MsaG044526 MtrunA17_Chr4g0022891 48.148 108 46 3 5 107 14 116 1.83e-27 106
MsaG044526 MtrunA17_Chr1g0151941 48.544 103 51 2 5 105 14 116 1.99e-27 106
MsaG044526 MtrunA17_Chr5g0400821 50.485 103 49 2 5 105 14 116 2.04e-27 107
MsaG044526 MtrunA17_Chr1g0186061 49.020 102 51 1 5 105 22 123 2.12e-27 106
MsaG044526 MtrunA17_Chr7g0254411 46.087 115 53 2 5 114 14 124 2.31e-27 108
MsaG044526 MtrunA17_Chr2g0309911 49.020 102 51 1 5 105 13 114 2.92e-27 107
MsaG044526 MtrunA17_Chr1g0187761 38.728 173 95 4 5 170 14 182 3.02e-27 106
MsaG044526 MtrunA17_Chr6g0460661 40.541 111 66 0 5 115 16 126 3.10e-27 103
MsaG044526 MtrunA17_Chr4g0068061 44.118 136 66 2 5 130 14 149 4.13e-27 107
MsaG044526 MtrunA17_Chr4g0048511 47.059 102 53 1 5 105 15 116 4.47e-27 107
MsaG044526 MtrunA17_Chr4g0044421 44.340 106 58 1 1 105 10 115 5.34e-27 103
MsaG044526 MtrunA17_Chr4g0030881 42.202 109 55 2 5 105 9 117 5.47e-27 105
MsaG044526 MtrunA17_Chr8g0346561 50.980 102 49 1 5 105 14 115 5.63e-27 106
MsaG044526 MtrunA17_Chr8g0342521 51.429 105 50 1 5 108 14 118 6.64e-27 107
MsaG044526 MtrunA17_Chr2g0327351 53.061 98 44 2 5 100 14 111 6.76e-27 106
MsaG044526 MtrunA17_Chr7g0217221 43.609 133 65 3 5 131 14 142 7.83e-27 105
MsaG044526 MtrunA17_Chr7g0217741 46.226 106 56 1 5 109 14 119 1.05e-26 105
MsaG044526 MtrunA17_Chr6g0452271 45.098 102 55 1 5 105 14 115 1.14e-26 106
MsaG044526 MtrunA17_Chr2g0323411 49.020 102 51 1 5 105 14 115 1.48e-26 105
MsaG044526 MtrunA17_Chr7g0261281 48.113 106 46 2 5 105 14 115 1.54e-26 104
MsaG044526 MtrunA17_Chr8g0387421 50.000 102 50 1 5 105 14 115 1.69e-26 105
MsaG044526 MtrunA17_Chr2g0281071 48.039 102 52 1 5 105 15 116 1.89e-26 105
MsaG044526 MtrunA17_Chr5g0435101 47.059 102 53 1 5 105 13 114 2.48e-26 102
MsaG044526 MtrunA17_Chr4g0060721 45.217 115 54 2 5 114 15 125 2.81e-26 105
MsaG044526 MtrunA17_Chr4g0055981 44.340 106 58 1 5 109 57 162 3.37e-26 102
MsaG044526 MtrunA17_Chr8g0349261 50.485 103 49 2 5 105 15 117 4.29e-26 103
MsaG044526 MtrunA17_Chr1g0203441 47.115 104 54 1 5 107 15 118 4.66e-26 103
MsaG044526 MtrunA17_Chr1g0154031 49.020 102 51 1 5 105 78 179 5.74e-26 105
MsaG044526 MtrunA17_Chr3g0131121 49.524 105 52 1 5 108 14 118 6.02e-26 103
MsaG044526 MtrunA17_Chr2g0327821 42.308 104 57 2 5 106 8 110 6.14e-26 102
MsaG044526 MtrunA17_Chr4g0042671 40.000 140 76 3 5 143 14 146 7.57e-26 105
MsaG044526 MtrunA17_Chr8g0354661 47.059 102 53 1 5 105 39 140 8.38e-26 106
MsaG044526 MtrunA17_Chr6g0470971 48.039 102 52 1 5 105 16 117 8.59e-26 103
MsaG044526 MtrunA17_Chr3g0092401 42.735 117 58 2 5 116 15 127 9.70e-26 103
MsaG044526 MtrunA17_Chr2g0322521 51.961 102 48 1 5 105 31 132 1.11e-25 104
MsaG044526 MtrunA17_Chr5g0397231 51.546 97 46 1 5 100 14 110 1.15e-25 103
MsaG044526 MtrunA17_Chr5g0434571 33.182 220 124 6 5 207 50 263 1.26e-25 103
MsaG044526 MtrunA17_Chr3g0110351 45.455 110 51 2 5 109 14 119 1.78e-25 102
MsaG044526 MtrunA17_Chr5g0441131 46.364 110 55 3 1 106 7 116 1.85e-25 99.8
MsaG044526 MtrunA17_Chr4g0037141 49.020 102 51 1 5 105 14 115 2.25e-25 102
MsaG044526 MtrunA17_Chr4g0054391 50.515 97 46 2 5 99 14 110 2.35e-25 102
MsaG044526 MtrunA17_Chr3g0121241 47.059 102 53 1 5 105 44 145 2.96e-25 102
MsaG044526 MtrunA17_Chr4g0022881 46.226 106 54 2 5 107 14 119 3.31e-25 100
MsaG044526 MtrunA17_Chr8g0342481 48.214 112 53 3 5 114 14 122 4.96e-25 102
MsaG044526 MtrunA17_Chr7g0228991 44.762 105 57 1 5 108 31 135 5.26e-25 100
MsaG044526 MtrunA17_Chr1g0209661 40.566 106 62 1 5 109 29 134 5.62e-25 101
MsaG044526 MtrunA17_Chr7g0271241 53.125 96 44 1 5 99 14 109 5.66e-25 102
MsaG044526 MtrunA17_Chr7g0220341 45.794 107 55 2 5 108 27 133 6.74e-25 100
MsaG044526 MtrunA17_Chr7g0228891 44.340 106 58 1 5 109 14 119 7.67e-25 100
MsaG044526 MtrunA17_Chr2g0311221 49.485 97 48 1 5 100 16 112 7.94e-25 101
MsaG044526 MtrunA17_Chr4g0072751 50.000 98 47 2 5 100 14 111 1.00e-24 101
MsaG044526 MtrunA17_Chr3g0080861 44.118 102 56 1 5 105 39 140 1.24e-24 102
MsaG044526 MtrunA17_Chr7g0228231 47.525 101 52 1 5 104 16 116 1.28e-24 98.2
MsaG044526 MtrunA17_Chr8g0343831 47.059 102 53 1 5 105 10 111 1.39e-24 99.0
MsaG044526 MtrunA17_Chr5g0434831 44.118 102 56 1 5 105 9 110 1.57e-24 97.4
MsaG044526 MtrunA17_Chr5g0440781 47.273 110 55 3 2 109 11 119 1.68e-24 97.4
MsaG044526 MtrunA17_Chr6g0453211 46.535 101 45 2 5 100 14 110 2.77e-24 99.8
MsaG044526 MtrunA17_Chr4g0070641 39.062 128 77 1 5 131 14 141 3.11e-24 95.9
MsaG044526 MtrunA17_Chr5g0434911 43.810 105 58 1 5 108 23 127 4.03e-24 98.2
MsaG044526 MtrunA17_Chr1g0194951 47.170 106 55 1 5 109 14 119 4.07e-24 100
MsaG044526 MtrunA17_Chr5g0440761 47.273 110 55 3 2 109 11 119 4.30e-24 98.2
MsaG044526 MtrunA17_Chr4g0057031 45.283 106 49 2 5 105 14 115 5.05e-24 98.2
MsaG044526 MtrunA17_Chr7g0228401 50.575 87 43 0 15 101 289 375 5.21e-24 100
MsaG044526 MtrunA17_Chr5g0434931 41.905 105 60 1 5 108 37 141 5.51e-24 98.2
MsaG044526 MtrunA17_Chr5g0441141 47.273 110 55 3 2 109 11 119 5.73e-24 97.8
MsaG044526 MtrunA17_Chr1g0177901 47.525 101 52 1 16 116 5 104 6.40e-24 96.3
MsaG044526 MtrunA17_Chr4g0070611 39.062 128 77 1 5 131 14 141 6.95e-24 98.2
MsaG044526 MtrunA17_Chr6g0450101 39.167 120 72 1 5 123 16 135 1.10e-23 95.5
MsaG044526 MtrunA17_Chr7g0233061 44.762 105 53 2 4 105 179 281 1.34e-23 98.6
MsaG044526 MtrunA17_Chr5g0434841 43.137 102 57 1 5 105 22 123 4.78e-23 96.3
MsaG044526 MtrunA17_Chr3g0099141 50.602 83 40 1 5 86 42 124 6.53e-23 91.7
MsaG044526 MtrunA17_Chr8g0360111 44.444 99 54 1 5 102 27 125 9.38e-23 94.4
MsaG044526 MtrunA17_Chr6g0487491 45.946 111 50 3 5 105 14 124 1.26e-22 94.0
MsaG044526 MtrunA17_Chr7g0240821 41.284 109 63 1 8 115 6 114 2.01e-22 92.8
MsaG044526 MtrunA17_Chr7g0269831 50.435 115 56 1 5 118 14 128 2.78e-22 94.7
MsaG044526 MtrunA17_Chr7g0247131 53.086 81 36 1 31 109 5 85 6.05e-22 92.4
MsaG044526 MtrunA17_Chr1g0194301 39.167 120 68 2 5 123 35 150 8.63e-22 92.0
MsaG044526 MtrunA17_Chr1g0194291 42.453 106 60 1 5 109 23 128 1.18e-21 91.7
MsaG044526 MtrunA17_Chr1g0192411 44.792 96 52 1 5 99 14 109 1.73e-20 90.1
MsaG044526 MtrunA17_Chr2g0293911 40.000 110 65 1 1 109 22 131 7.33e-20 87.8
MsaG044526 MtrunA17_Chr4g0068921 40.909 110 64 1 1 109 22 131 7.69e-20 85.1
MsaG044526 MtrunA17_Chr5g0416341 36.735 98 62 0 8 105 29 126 3.04e-19 87.0
MsaG044526 MtrunA17_Chr8g0362231 33.333 108 72 0 8 115 25 132 7.99e-19 85.5
MsaG044526 MtrunA17_Chr3g0093811 47.222 72 38 0 38 109 18 89 3.09e-18 82.0
MsaG044526 MtrunA17_Chr5g0395221 50.667 75 36 1 5 78 14 88 3.44e-18 77.4
MsaG044526 MtrunA17_Chr2g0323321 41.304 92 53 1 5 95 13 104 1.33e-17 76.6
MsaG044526 MtrunA17_Chr5g0425591 44.706 85 45 2 1 83 7 91 6.22e-17 74.3
MsaG044526 MtrunA17_Chr4g0042611 45.333 75 40 1 5 78 14 88 6.80e-17 73.9
MsaG044526 MtrunA17_Chr7g0229131 45.588 68 37 0 37 104 7 74 2.12e-16 75.1
MsaG044526 MtrunA17_Chr7g0229101 47.761 67 35 0 37 103 7 73 6.51e-16 74.7
MsaG044526 MtrunA17_Chr5g0434901 44.776 67 37 0 37 103 8 74 8.43e-16 72.0
MsaG044526 MtrunA17_Chr7g0238651 34.783 115 72 1 8 119 10 124 9.41e-16 76.3
MsaG044526 MtrunA17_Chr8g0342511 45.946 74 39 1 5 77 14 87 7.60e-15 68.9
MsaG044526 MtrunA17_Chr6g0453751 42.697 89 41 3 5 83 22 110 8.80e-15 69.7
MsaG044526 MtrunA17_Chr8g0342461 48.052 77 38 2 5 79 14 90 1.43e-14 69.3
MsaG044526 MtrunA17_Chr8g0342531 44.737 76 41 1 5 79 14 89 2.53e-14 69.3
MsaG044526 MtrunA17_Chr2g0294811 40.476 84 49 1 5 87 14 97 4.91e-14 67.4
MsaG044526 MtrunA17_Chr8g0342471 46.753 77 39 2 5 79 14 90 5.45e-14 67.8
MsaG044526 MtrunA17_Chr3g0104501 52.830 53 25 0 4 56 132 184 5.91e-13 66.2
MsaG044526 MtrunA17_Chr7g0233161 47.458 59 31 0 2 60 296 354 1.46e-12 67.0
MsaG044526 MtrunA17_Chr7g0233151 55.319 47 21 0 59 105 5 51 5.05e-12 63.2
MsaG044526 MtrunA17_Chr5g0421201 52.083 48 23 0 60 107 15 62 1.99e-11 61.6
MsaG044526 MtrunA17_Chr4g0046181 46.552 58 31 0 4 61 220 277 2.33e-11 63.2
MsaG044526 MtrunA17_Chr3g0104491 47.170 53 28 0 55 107 17 69 6.86e-11 61.6
MsaG044526 MtrunA17_Chr6g0483051 35.106 94 60 1 5 98 120 212 7.57e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG044526 AT5G67300.1 54.480 279 92 7 2 251 3 275 8.66e-84 254
MsaG044526 AT4G37260.1 53.546 282 81 9 1 249 9 273 1.18e-83 254
MsaG044526 AT2G23290.1 50.909 275 99 6 1 251 9 271 1.09e-76 236
MsaG044526 AT3G50060.1 48.000 275 109 6 2 251 3 268 8.55e-74 228
MsaG044526 AT3G55730.1 71.963 107 30 0 3 109 54 160 1.64e-50 171
MsaG044526 AT3G09230.1 48.087 183 83 3 2 179 52 227 3.63e-47 162
MsaG044526 AT2G39880.1 67.961 103 33 0 3 105 48 150 9.19e-47 160
MsaG044526 AT3G09370.1 56.731 104 45 0 2 105 127 230 9.09e-38 139
MsaG044526 AT3G09370.2 56.731 104 45 0 2 105 132 235 9.85e-38 139
MsaG044526 AT3G09370.3 56.731 104 45 0 2 105 140 243 1.25e-37 139
MsaG044526 AT1G69560.1 56.436 101 44 0 5 105 107 207 1.61e-37 135
MsaG044526 AT1G69560.2 56.436 101 44 0 5 105 123 223 2.24e-37 135
MsaG044526 AT1G26780.1 56.436 101 44 0 5 105 98 198 2.73e-37 133
MsaG044526 AT3G29020.1 51.754 114 55 0 5 118 65 178 3.05e-37 132
MsaG044526 AT1G26780.2 56.436 101 44 0 5 105 98 198 8.82e-37 134
MsaG044526 AT3G29020.2 51.754 114 55 0 5 118 67 180 9.58e-37 132
MsaG044526 AT5G02320.3 50.459 109 54 0 4 112 66 174 1.32e-36 136
MsaG044526 AT5G17800.1 55.446 101 45 0 5 105 93 193 1.99e-36 132
MsaG044526 AT5G11510.3 49.541 109 55 0 4 112 80 188 2.20e-36 137
MsaG044526 AT5G11510.1 49.541 109 55 0 4 112 80 188 2.20e-36 137
MsaG044526 AT5G11510.4 49.541 109 55 0 4 112 80 188 2.20e-36 137
MsaG044526 AT5G02320.1 50.459 109 54 0 4 112 126 234 2.23e-36 136
MsaG044526 AT5G02320.2 50.459 109 54 0 4 112 126 234 2.23e-36 136
MsaG044526 AT5G11510.2 49.541 109 55 0 4 112 80 188 2.94e-36 137
MsaG044526 AT5G11510.5 49.541 109 55 0 4 112 80 188 3.14e-36 137
MsaG044526 AT4G32730.5 52.294 109 52 0 4 112 86 194 4.27e-36 137
MsaG044526 AT4G32730.4 52.294 109 52 0 4 112 86 194 4.27e-36 137
MsaG044526 AT4G32730.3 52.294 109 52 0 4 112 86 194 4.27e-36 137
MsaG044526 AT4G32730.2 52.294 109 52 0 4 112 86 194 4.27e-36 137
MsaG044526 AT4G32730.1 52.294 109 52 0 4 112 86 194 4.39e-36 137
MsaG044526 AT1G17950.1 43.750 128 67 1 5 132 5 127 6.93e-35 126
MsaG044526 AT4G33450.1 51.485 101 49 0 5 105 19 119 1.41e-34 125
MsaG044526 AT3G27785.1 52.885 104 49 0 4 107 188 291 7.67e-34 127
MsaG044526 AT4G18770.1 51.818 110 48 1 4 108 216 325 8.36e-34 127
MsaG044526 AT1G73410.2 53.465 101 47 0 5 105 6 106 9.75e-34 122
MsaG044526 AT1G73410.1 53.465 101 47 0 5 105 6 106 1.31e-33 123
MsaG044526 AT5G11050.1 50.000 104 52 0 4 107 104 207 2.05e-33 126
MsaG044526 AT5G58850.1 45.528 123 60 1 4 119 104 226 3.40e-33 125
MsaG044526 AT5G60890.1 52.941 102 47 1 5 105 14 115 9.21e-31 117
MsaG044526 AT4G01680.3 54.902 102 45 1 5 105 14 115 1.98e-30 114
MsaG044526 AT5G39700.1 44.248 113 63 0 6 118 57 169 2.04e-30 113
MsaG044526 AT4G26930.1 53.465 101 46 1 5 104 21 121 2.25e-30 117
MsaG044526 AT5G10280.1 50.467 107 44 2 5 106 14 116 2.57e-30 116
MsaG044526 AT5G56110.1 49.057 106 53 1 5 109 14 119 3.04e-30 115
MsaG044526 AT1G16490.1 40.217 184 91 4 5 175 16 193 3.55e-30 114
MsaG044526 AT3G60460.1 53.922 102 45 2 5 104 13 114 9.88e-30 114
MsaG044526 AT4G01680.1 54.902 102 45 1 5 105 14 115 1.11e-29 114
MsaG044526 AT5G57620.1 52.427 103 47 2 5 105 14 116 6.55e-29 112
MsaG044526 AT5G26660.1 39.881 168 90 2 5 161 14 181 6.58e-29 113
MsaG044526 AT1G57560.1 34.188 234 125 6 5 220 14 236 6.79e-29 112
MsaG044526 AT1G57560.2 33.784 222 103 5 5 220 14 197 1.03e-28 110
MsaG044526 AT5G40360.1 44.828 116 63 1 5 120 158 272 1.03e-28 112
MsaG044526 AT1G09540.1 53.922 102 46 1 5 105 14 115 1.22e-28 112
MsaG044526 AT5G65230.1 50.980 102 49 1 5 105 14 115 1.34e-28 111
MsaG044526 AT3G61250.1 44.118 136 65 4 5 135 14 143 1.96e-28 110
MsaG044526 AT2G31180.1 45.455 121 55 3 5 118 14 130 2.66e-28 109
MsaG044526 AT3G13890.2 50.476 105 51 1 5 108 14 118 2.68e-28 111
MsaG044526 AT2G32460.1 50.000 102 50 1 5 105 20 121 2.73e-28 113
MsaG044526 AT1G18710.1 49.038 104 52 1 5 107 14 117 2.92e-28 109
MsaG044526 AT4G28110.1 50.000 102 50 1 5 105 14 115 3.00e-28 109
MsaG044526 AT3G11440.2 49.020 102 51 1 5 105 43 144 3.40e-28 112
MsaG044526 AT2G32460.2 50.000 102 50 1 5 105 8 109 3.45e-28 112
MsaG044526 AT5G06100.1 49.020 102 51 1 5 105 34 135 3.56e-28 112
MsaG044526 AT5G54230.1 50.980 102 49 1 5 105 14 115 3.61e-28 110
MsaG044526 AT1G34670.1 49.057 106 45 2 5 105 14 115 3.65e-28 111
MsaG044526 AT5G12870.1 50.000 106 52 1 5 109 20 125 3.77e-28 109
MsaG044526 AT1G74430.1 49.038 104 52 1 5 107 14 117 3.91e-28 109
MsaG044526 AT3G48920.1 50.495 101 49 1 5 104 20 120 4.38e-28 108
MsaG044526 AT3G11440.3 49.020 102 51 1 5 105 43 144 5.39e-28 112
MsaG044526 AT3G11440.4 49.020 102 51 1 5 105 43 144 5.39e-28 112
MsaG044526 AT3G11440.1 49.020 102 51 1 5 105 43 144 5.39e-28 112
MsaG044526 AT5G06100.5 49.020 102 51 1 5 105 34 135 5.58e-28 112
MsaG044526 AT5G06100.2 49.020 102 51 1 5 105 34 135 5.58e-28 112
MsaG044526 AT5G06100.3 49.020 102 51 1 5 105 34 135 5.58e-28 112
MsaG044526 AT5G06100.4 49.020 102 51 1 5 105 34 135 5.58e-28 112
MsaG044526 AT3G24310.1 46.087 115 61 1 5 118 20 134 7.09e-28 108
MsaG044526 AT4G17785.2 51.961 102 48 1 5 105 15 116 7.91e-28 110
MsaG044526 AT1G79180.1 46.847 111 58 1 5 114 16 126 8.00e-28 108
MsaG044526 AT1G22640.1 34.951 206 113 6 5 200 14 208 9.88e-28 107
MsaG044526 AT4G17785.1 51.961 102 48 1 5 105 15 116 1.02e-27 110
MsaG044526 AT1G56160.1 50.980 102 49 1 5 105 16 117 1.04e-27 108
MsaG044526 AT5G65790.1 45.902 122 61 3 5 124 14 132 1.31e-27 110
MsaG044526 AT3G30210.1 48.571 105 53 1 5 108 29 133 1.51e-27 107
MsaG044526 AT4G01680.2 49.123 114 45 2 5 105 14 127 1.64e-27 109
MsaG044526 AT3G12720.1 50.476 105 51 1 5 108 24 128 1.66e-27 108
MsaG044526 AT1G08810.1 49.057 106 45 2 5 105 14 115 1.70e-27 107
MsaG044526 AT2G36890.1 51.456 103 48 2 5 105 14 116 1.78e-27 108
MsaG044526 AT3G47600.1 44.094 127 53 4 5 117 14 136 2.45e-27 108
MsaG044526 AT2G36890.2 51.456 103 48 2 5 105 55 157 2.54e-27 108
MsaG044526 AT1G18570.1 49.020 102 51 1 5 105 15 116 2.68e-27 108
MsaG044526 AT1G63910.1 51.961 102 48 1 5 105 14 115 2.84e-27 108
MsaG044526 AT3G13890.1 47.368 114 50 2 5 108 14 127 3.23e-27 108
MsaG044526 AT4G13480.1 48.077 104 53 1 5 107 8 111 3.49e-27 106
MsaG044526 AT3G08500.1 51.961 102 48 1 5 105 32 133 3.52e-27 108
MsaG044526 AT5G52600.1 48.571 105 53 1 5 108 14 118 3.67e-27 105
MsaG044526 AT3G02940.2 47.170 106 47 2 5 105 14 115 3.83e-27 107
MsaG044526 AT4G05100.1 49.020 102 51 1 5 105 15 116 4.57e-27 107
MsaG044526 AT4G25560.1 50.000 102 50 1 5 105 12 113 4.85e-27 106
MsaG044526 AT5G23000.1 51.456 103 48 2 5 105 14 116 5.06e-27 107
MsaG044526 AT3G02940.1 48.039 102 52 1 5 105 14 115 7.12e-27 107
MsaG044526 AT3G02940.3 48.039 102 52 1 5 105 14 115 7.12e-27 107
MsaG044526 AT5G59780.3 43.137 102 57 1 5 105 10 111 7.27e-27 105
MsaG044526 AT5G55020.1 50.495 101 49 1 5 104 28 128 7.75e-27 109
MsaG044526 AT5G15310.1 48.039 102 52 1 5 105 14 115 7.81e-27 107
MsaG044526 AT5G15310.2 48.039 102 52 1 5 105 14 115 7.82e-27 106
MsaG044526 AT5G15310.4 48.039 102 52 1 5 105 14 115 1.07e-26 105
MsaG044526 AT3G53200.1 50.980 102 49 1 5 105 11 112 1.18e-26 104
MsaG044526 AT3G46130.1 44.118 102 56 1 5 105 11 112 1.24e-26 105
MsaG044526 AT4G21440.1 49.020 102 51 1 5 105 14 115 1.31e-26 107
MsaG044526 AT3G01140.2 48.039 102 52 1 5 105 14 115 1.52e-26 106
MsaG044526 AT4G37780.1 49.541 109 53 2 5 111 14 122 1.55e-26 105
MsaG044526 AT5G14750.1 46.078 102 54 1 5 105 18 119 1.59e-26 103
MsaG044526 AT3G28470.1 50.515 97 47 1 5 100 14 110 1.70e-26 105
MsaG044526 AT3G01140.1 48.039 102 52 1 5 105 57 158 1.89e-26 107
MsaG044526 AT5G07690.1 50.495 101 49 1 5 104 14 114 1.93e-26 106
MsaG044526 AT2G16720.1 49.020 102 51 1 5 105 14 115 1.96e-26 104
MsaG044526 AT5G16770.4 47.170 106 47 2 5 105 14 115 2.08e-26 105
MsaG044526 AT5G16770.3 47.170 106 47 2 5 105 14 115 2.08e-26 105
MsaG044526 AT3G49690.1 50.485 103 49 2 5 105 14 116 2.18e-26 105
MsaG044526 AT1G35515.1 37.736 159 87 6 5 162 14 161 2.36e-26 103
MsaG044526 AT5G61420.2 50.000 102 50 1 5 105 14 115 2.41e-26 106
MsaG044526 AT5G40330.1 46.078 102 54 1 5 105 14 115 2.48e-26 103
MsaG044526 AT5G62470.1 43.750 112 63 0 5 116 14 125 2.88e-26 105
MsaG044526 AT5G16770.1 47.170 106 47 2 5 105 14 115 3.47e-26 105
MsaG044526 AT5G16770.2 47.170 106 47 2 5 105 14 115 3.47e-26 105
MsaG044526 AT4G09460.1 50.000 102 50 1 5 105 14 115 3.60e-26 103
MsaG044526 AT1G74080.1 50.485 103 49 2 5 106 14 115 3.86e-26 105
MsaG044526 AT4G38620.1 50.000 102 50 1 5 105 14 115 4.23e-26 104
MsaG044526 AT5G62470.2 43.590 117 57 2 5 116 14 126 4.34e-26 105
MsaG044526 AT1G74650.1 47.170 106 47 2 5 105 14 115 5.71e-26 104
MsaG044526 AT4G34990.1 50.000 102 50 1 5 105 14 115 5.72e-26 103
MsaG044526 AT4G00540.2 49.038 104 50 1 5 105 103 206 6.14e-26 105
MsaG044526 AT5G07700.1 49.020 102 51 1 5 105 14 115 6.59e-26 104
MsaG044526 AT5G07700.2 49.020 102 51 1 5 105 14 115 6.59e-26 104
MsaG044526 AT3G23250.1 46.226 106 48 2 5 105 14 115 9.31e-26 103
MsaG044526 AT3G28910.1 47.170 106 47 2 5 105 14 115 1.04e-25 103
MsaG044526 AT3G27920.1 47.059 102 53 1 5 105 16 117 1.08e-25 101
MsaG044526 AT4G00540.1 49.038 104 50 1 5 105 101 204 1.18e-25 105
MsaG044526 AT3G13540.1 46.226 106 56 1 1 105 21 126 1.24e-25 102
MsaG044526 AT1G66230.1 34.031 191 99 6 5 181 14 191 1.89e-25 102
MsaG044526 AT2G26960.1 49.505 101 50 1 5 104 22 122 1.90e-25 104
MsaG044526 AT5G14340.1 44.340 106 58 1 5 109 26 131 2.69e-25 102
MsaG044526 AT1G25340.1 40.000 115 67 2 5 117 20 134 6.70e-25 100
MsaG044526 AT1G06180.1 47.170 106 47 2 5 105 14 115 7.64e-25 100
MsaG044526 AT1G25340.2 40.351 114 63 2 5 117 20 129 8.25e-25 100
MsaG044526 AT3G12820.1 49.020 102 51 1 5 105 16 117 1.01e-24 99.4
MsaG044526 AT1G25340.3 40.351 114 63 2 5 117 20 129 1.03e-24 100
MsaG044526 AT4G22680.1 47.170 106 47 2 5 105 14 115 1.06e-24 100
MsaG044526 AT2G25230.1 45.545 101 53 2 5 104 26 125 1.19e-24 99.4
MsaG044526 AT3G27810.1 33.838 198 107 6 5 199 22 198 1.60e-24 98.6
MsaG044526 AT5G16600.1 47.170 106 47 2 5 105 14 115 4.07e-24 99.8
MsaG044526 AT3G62610.1 47.059 102 53 1 5 105 14 115 4.20e-24 100
MsaG044526 AT5G40350.1 42.017 119 63 2 5 117 19 137 4.42e-24 97.1
MsaG044526 AT2G47190.1 43.119 109 61 1 2 109 19 127 5.06e-24 98.6
MsaG044526 AT4G12350.1 46.226 106 48 2 5 105 14 115 6.18e-24 98.6
MsaG044526 AT5G49330.1 42.969 128 68 3 5 127 14 141 8.76e-24 99.0
MsaG044526 AT3G01530.1 45.545 101 54 1 5 104 27 127 1.57e-23 95.5
MsaG044526 AT1G68320.1 40.566 106 62 1 5 109 21 126 1.78e-23 97.1
MsaG044526 AT5G35550.1 45.098 102 55 1 5 105 16 117 2.03e-23 96.7
MsaG044526 AT5G52260.1 48.039 102 52 1 5 105 14 115 4.13e-23 95.9
MsaG044526 AT1G79180.2 35.135 148 54 2 5 114 16 159 4.50e-23 97.1
MsaG044526 AT2G47460.1 43.925 107 59 1 5 110 14 120 4.69e-23 97.4
MsaG044526 AT1G48000.1 42.453 106 60 1 5 109 34 139 8.22e-23 94.4
MsaG044526 AT2G02820.3 40.816 98 58 0 8 105 33 130 1.01e-21 93.2
MsaG044526 AT2G26950.1 42.857 105 51 2 5 104 18 118 1.03e-21 94.0
MsaG044526 AT5G62320.1 44.144 111 50 3 5 105 15 123 1.27e-21 91.3
MsaG044526 AT2G02820.1 40.404 99 59 0 8 106 33 131 1.27e-21 94.4
MsaG044526 AT2G02820.2 40.404 99 59 0 8 106 33 131 1.54e-21 94.4
MsaG044526 AT1G66370.1 41.176 102 59 1 5 105 10 111 4.28e-21 90.1
MsaG044526 AT5G14750.3 52.941 68 32 0 38 105 18 85 8.40e-21 87.4
MsaG044526 AT5G26660.2 38.806 134 72 1 38 161 17 150 1.15e-20 90.1
MsaG044526 AT5G49620.1 40.323 124 69 2 1 123 24 143 1.88e-20 89.4
MsaG044526 AT3G06490.1 41.129 124 68 2 1 123 17 136 2.50e-20 89.4
MsaG044526 AT5G40430.1 39.806 103 61 1 2 104 51 152 5.24e-20 87.0
MsaG044526 AT1G14350.2 34.783 115 75 0 8 122 28 142 7.34e-20 89.0
MsaG044526 AT1G14350.1 34.783 115 75 0 8 122 28 142 7.34e-20 89.0
MsaG044526 AT3G53200.2 55.882 68 30 0 38 105 12 79 1.46e-19 84.7
MsaG044526 AT5G59780.2 48.529 68 35 0 38 105 23 90 2.45e-19 84.3
MsaG044526 AT3G27810.2 32.927 164 87 5 38 199 7 149 5.17e-19 82.8
MsaG044526 AT3G46130.3 48.529 68 35 0 38 105 13 80 5.53e-19 84.0
MsaG044526 AT3G46130.4 48.529 68 35 0 38 105 23 90 5.87e-19 84.0
MsaG044526 AT1G66380.1 43.137 102 57 1 5 105 10 111 6.30e-19 81.3
MsaG044526 AT5G35550.2 54.412 68 31 0 38 105 53 120 9.03e-19 84.0
MsaG044526 AT1G56650.1 40.496 121 67 3 5 121 10 129 1.76e-18 82.8
MsaG044526 AT3G12820.2 52.941 68 32 0 38 105 2 69 2.56e-18 81.3
MsaG044526 AT5G40350.2 43.529 85 43 1 38 117 8 92 2.70e-18 80.5
MsaG044526 AT1G66390.1 43.137 102 57 1 5 105 10 111 6.66e-18 81.3
MsaG044526 AT3G47600.2 46.067 89 39 2 38 117 42 130 8.64e-18 82.0
MsaG044526 AT5G49620.2 36.232 138 69 3 1 123 24 157 7.78e-17 79.3
MsaG044526 AT3G18100.1 36.000 125 73 1 5 129 546 663 8.82e-17 80.5
MsaG044526 AT3G18100.3 41.489 94 55 0 5 98 498 591 8.83e-17 80.5
MsaG044526 AT3G18100.2 36.000 125 73 1 5 129 333 450 1.08e-16 80.1
MsaG044526 AT3G18100.4 41.489 94 55 0 5 98 385 478 1.25e-16 80.1
MsaG044526 AT1G71030.2 50.769 65 32 0 41 105 5 69 2.00e-16 75.9
MsaG044526 AT1G71030.1 50.769 65 32 0 41 105 19 83 2.10e-16 75.9
MsaG044526 AT1G22640.3 32.298 161 89 5 49 200 2 151 1.30e-14 71.2
MsaG044526 AT1G18960.1 35.185 108 66 3 3 109 8 112 4.19e-14 71.6
MsaG044526 AT2G37630.1 38.298 94 55 1 8 98 7 100 8.93e-14 70.9
MsaG044526 AT5G14750.4 46.552 58 31 0 49 106 2 59 3.96e-13 65.9
MsaG044526 AT5G14750.2 46.552 58 31 0 49 106 2 59 3.96e-13 65.9
MsaG044526 AT1G66380.3 44.156 77 43 0 29 105 2 78 1.34e-12 63.2

Find 88 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAATTTGAGTGGTGAATTTA+TGG 0.181948 8:+61577414 MsaT044526.1:CDS
GGTTCTGATTTAAGCGATTC+TGG 0.236937 8:+61577139 MsaT044526.1:CDS
CTAAGCCAATTGGGATTAAC+AGG 0.244446 8:+61577536 MsaT044526.1:CDS
GTTAAGGATTCGTCTTCTTC+GGG 0.287725 8:-61576761 None:intergenic
TGTTAAGGATTCGTCTTCTT+CGG 0.294025 8:-61576762 None:intergenic
CACAATAGCCCGTTTGTTAT+CGG 0.297526 8:+61576973 MsaT044526.1:CDS
CTCTGCTTCCGTCGGTGCTC+CGG 0.310058 8:+61577105 MsaT044526.1:CDS
GAAAGCGACAGCGAAGTTAA+AGG 0.313723 8:-61577271 None:intergenic
ATAATGATGTTATCTTCTTC+AGG 0.320050 8:-61576917 None:intergenic
ATCGTTACGGTCCTCGTAAC+TGG 0.325319 8:+61576795 MsaT044526.1:CDS
GGTGCTCCGGGGAGTCCTTC+TGG 0.325422 8:+61577118 MsaT044526.1:CDS
CTCATCAGCCGTGCTATTCC+TGG 0.326073 8:+61576821 MsaT044526.1:CDS
GCAGAAGTGGTAAATCTTGC+AGG 0.345819 8:+61576843 MsaT044526.1:CDS
GAATGAAGTGAGGAGTTATA+TGG 0.356066 8:+61577459 MsaT044526.1:CDS
GTTTCTGAAGAAGCTGGAAT+TGG 0.358307 8:+61577385 MsaT044526.1:CDS
TCTGCTTCCGTCGGTGCTCC+GGG 0.359058 8:+61577106 MsaT044526.1:CDS
AATGTTTCTGCTAAGCCAAT+TGG 0.360539 8:+61577526 MsaT044526.1:CDS
ATTGGGATTAACAGGGTTGA+TGG 0.384025 8:+61577544 MsaT044526.1:CDS
ATGCTCAGTTCGGTAACAAA+TGG 0.391933 8:+61576948 MsaT044526.1:CDS
GGTTACGGTGCCGGAGGCAG+TGG 0.397430 8:+61577234 MsaT044526.1:CDS
ACAATAGCCCGTTTGTTATC+GGG 0.419316 8:+61576974 MsaT044526.1:CDS
ACAGGCAAACGAATCGGAAC+AGG 0.431816 8:-61577181 None:intergenic
GGCTCCGATGTAGTTTCAAC+AGG 0.447468 8:-61577199 None:intergenic
ATGTTTCTGCTAAGCCAATT+GGG 0.449436 8:+61577527 MsaT044526.1:CDS
TCGTCTTCTTCGGGGCTCCA+TGG 0.449510 8:-61576752 None:intergenic
AGTTATATGGAAGAGAGAAA+TGG 0.450100 8:+61577472 MsaT044526.1:CDS
TCAACCCTGTTAATCCCAAT+TGG 0.450454 8:-61577541 None:intergenic
TCGCTGTCGCTTTCTCTACC+AGG 0.454968 8:+61577280 MsaT044526.1:CDS
GGCGATGGAGGTTACGGTGC+CGG 0.456055 8:+61577225 MsaT044526.1:CDS
GTTGTTGGAGGAGGACTAAC+CGG 0.475495 8:-61577325 None:intergenic
GCCGGAGGCGATGGAGGTTA+CGG 0.475996 8:+61577219 MsaT044526.1:CDS
TGCTCAGTTCGGTAACAAAT+GGG 0.476260 8:+61576949 MsaT044526.1:CDS
TACATCGGAGCCGGAGGCGA+TGG 0.477002 8:+61577210 MsaT044526.1:CDS
CGGTTCGGCCCGATAACAAA+CGG 0.483577 8:-61576982 None:intergenic
ACGACAGTTACAGCGGTTGT+TGG 0.487200 8:-61577340 None:intergenic
ATCAGAGCCCATGCTCAGTT+CGG 0.492188 8:+61576938 MsaT044526.1:CDS
ACAAAACTCGTTGATCGTTA+CGG 0.493663 8:+61576782 MsaT044526.1:CDS
GGTGCCGGAGGCAGTGGAGG+AGG 0.494219 8:+61577240 MsaT044526.1:CDS
CGATAACAAACGGGCTATTG+TGG 0.501898 8:-61576972 None:intergenic
ATTTGTTACCGAACTGAGCA+TGG 0.503627 8:-61576946 None:intergenic
TACGGTGCCGGAGGCAGTGG+AGG 0.513406 8:+61577237 MsaT044526.1:CDS
GTTTCAACAGGCAAACGAAT+CGG 0.515533 8:-61577187 None:intergenic
CACAAAATGGATCGGATCAA+AGG 0.516697 8:+61576728 None:intergenic
ACCGTAACCTCCATCGCCTC+CGG 0.524352 8:-61577220 None:intergenic
TCATCCTCCTCCACTGCCTC+CGG 0.526186 8:-61577244 None:intergenic
AGGACTCCCCGGAGCACCGA+CGG 0.528402 8:-61577113 None:intergenic
CAAGATTTACCACTTCTGCC+AGG 0.532045 8:-61576839 None:intergenic
CTTAAACGCTCTGCTTCCGT+CGG 0.532792 8:+61577097 MsaT044526.1:CDS
GCGAAAGTTTCTGAAGAAGC+TGG 0.536187 8:+61577379 MsaT044526.1:CDS
GTTACAGCGGTTGTTGGAGG+AGG 0.536611 8:-61577334 None:intergenic
ACTGGAATTCGACACTGAAA+CGG 0.538291 8:+61577023 MsaT044526.1:CDS
AACCGCTGTAACTGTCGTAA+CGG 0.545884 8:+61577345 MsaT044526.1:CDS
ACAGTTACAGCGGTTGTTGG+AGG 0.552327 8:-61577337 None:intergenic
TCAGAACCAGAAGGACTCCC+CGG 0.552415 8:-61577124 None:intergenic
GCAGAGCGTTTAAGCGGCTG+AGG 0.554004 8:-61577088 None:intergenic
AGGATTGAAATCACGATCAT+CGG 0.558324 8:-61577068 None:intergenic
AGATGATAAAGAATGAAGTG+AGG 0.560968 8:+61577449 MsaT044526.1:CDS
TGTTGAAACTACATCGGAGC+CGG 0.564862 8:+61577201 MsaT044526.1:CDS
GTAAATCTTGCAGGCTGAGA+TGG 0.565392 8:+61576852 MsaT044526.1:CDS
GGATGCTGCTGCGACGGTGC+CGG 0.565601 8:+61577306 MsaT044526.1:CDS
GGTTCGGCCCGATAACAAAC+GGG 0.570930 8:-61576981 None:intergenic
GTCGCAGCAGCATCCACACC+TGG 0.571853 8:-61577298 None:intergenic
TTTGTTACCGAACTGAGCAT+GGG 0.585042 8:-61576945 None:intergenic
GTCGCTTTCTCTACCAGGTG+TGG 0.586924 8:+61577285 MsaT044526.1:CDS
AACTGTCGTAACGGCTTCAG+TGG 0.591862 8:+61577354 MsaT044526.1:CDS
ATCGGAGCCGGAGGCGATGG+AGG 0.592565 8:+61577213 MsaT044526.1:CDS
AGGTGTGGATGCTGCTGCGA+CGG 0.598215 8:+61577300 MsaT044526.1:CDS
TGGATCGGATCAAAGGTCCA+TGG 0.602703 8:+61576735 MsaT044526.1:CDS
GAGGCAGTGGAGGAGGATGA+CGG 0.602949 8:+61577247 MsaT044526.1:CDS
TCATCACTCACAAAATGGAT+CGG 0.604942 8:+61576720 None:intergenic
TTTGAGTGGTGAATTTATGG+CGG 0.605749 8:+61577417 MsaT044526.1:CDS
CGGAAGTGTTCGTCTCTCAT+CGG 0.605837 8:+61577043 MsaT044526.1:CDS
CGTGCTATTCCTGGCAGAAG+TGG 0.606057 8:+61576830 MsaT044526.1:CDS
GTTTCAGTGTCGAATTCCAG+TGG 0.610246 8:-61577021 None:intergenic
AAAGCACGATGCTCAACTTG+AGG 0.613981 8:-61576890 None:intergenic
TTAAGGATTCGTCTTCTTCG+GGG 0.616493 8:-61576760 None:intergenic
TTTGCCTGTTGAAACTACAT+CGG 0.619768 8:+61577195 MsaT044526.1:CDS
TGTCGTAACGGCTTCAGTGG+CGG 0.623523 8:+61577357 MsaT044526.1:CDS
CACTTCTGCCAGGAATAGCA+CGG 0.635899 8:-61576829 None:intergenic
CTGCTTCCGTCGGTGCTCCG+GGG 0.641525 8:+61577107 MsaT044526.1:CDS
ACGGAAGCAGAGCGTTTAAG+CGG 0.643836 8:-61577094 None:intergenic
TCGCTTAAATCAGAACCAGA+AGG 0.646326 8:-61577133 None:intergenic
GATGGAGGTTACGGTGCCGG+AGG 0.646652 8:+61577228 MsaT044526.1:CDS
ATTGGAGCGTTAAATTTGAG+TGG 0.650281 8:+61577403 MsaT044526.1:CDS
TGAAACTACATCGGAGCCGG+AGG 0.656246 8:+61577204 MsaT044526.1:CDS
AGCCGTTACGACAGTTACAG+CGG 0.657721 8:-61577347 None:intergenic
TAAGCCAATTGGGATTAACA+GGG 0.674454 8:+61577537 MsaT044526.1:CDS
CTGATGAGTGACCAGTTACG+AGG 0.676012 8:-61576806 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
Chromosome Type Strat End Strand Name
Chr8 gene 61576734 61577570 61576734 ID=MsaG044526
Chr8 mRNA 61576734 61577570 61576734 ID=MsaT044526.1;Parent=MsaG044526
Chr8 exon 61576734 61577570 61576734 ID=MsaT044526.1.exon1;Parent=MsaT044526.1
Chr8 CDS 61576734 61577570 61576734 ID=cds.MsaT044526.1;Parent=MsaT044526.1
Gene Sequence

>MsaT044526.1

ATGGATCGGATCAAAGGTCCATGGAGCCCCGAAGAAGACGAATCCTTAACAAAACTCGTTGATCGTTACGGTCCTCGTAACTGGTCACTCATCAGCCGTGCTATTCCTGGCAGAAGTGGTAAATCTTGCAGGCTGAGATGGTGTAATCAGCTTTCTCCTCAAGTTGAGCATCGTGCTTTTTCTCCTGAAGAAGATAACATCATTATCAGAGCCCATGCTCAGTTCGGTAACAAATGGGCCACAATAGCCCGTTTGTTATCGGGCCGAACCGATAACGCTATCAAAAACCACTGGAATTCGACACTGAAACGGAAGTGTTCGTCTCTCATCGGTTCCGATGATCGTGATTTCAATCCTCAGCCGCTTAAACGCTCTGCTTCCGTCGGTGCTCCGGGGAGTCCTTCTGGTTCTGATTTAAGCGATTCTGGTGTTCAAACTGTTTTTCGTCCTGTTCCGATTCGTTTGCCTGTTGAAACTACATCGGAGCCGGAGGCGATGGAGGTTACGGTGCCGGAGGCAGTGGAGGAGGATGACGGTCCTTTAACTTCGCTGTCGCTTTCTCTACCAGGTGTGGATGCTGCTGCGACGGTGCCGGTTAGTCCTCCTCCAACAACCGCTGTAACTGTCGTAACGGCTTCAGTGGCGGCGAAAGTTTCTGAAGAAGCTGGAATTGGAGCGTTAAATTTGAGTGGTGAATTTATGGCGGTTATGCAAGAGATGATAAAGAATGAAGTGAGGAGTTATATGGAAGAGAGAAATGGAATGTGTTTTCAAGGAGTTGATAGGCTTAGAAATGTTTCTGCTAAGCCAATTGGGATTAACAGGGTTGATGGATGA
Protein sequence

>MsaT044526.1

MDRIKGPWSPEEDESLTKLVDRYGPRNWSLISRAIPGRSGKSCRLRWCNQLSPQVEHRAFSPEEDNIIIRAHAQFGNKWATIARLLSGRTDNAIKNHWNSTLKRKCSSLIGSDDRDFNPQPLKRSASVGAPGSPSGSDLSDSGVQTVFRPVPIRLPVETTSEPEAMEVTVPEAVEEDDGPLTSLSLSLPGVDAAATVPVSPPPTTAVTVVTASVAAKVSEEAGIGALNLSGEFMAVMQEMIKNEVRSYMEERNGMCFQGVDRLRNVSAKPIGINRVDG*