AlfalfaGEDB | MsaG044571

M. sativa ssp. caerulea / MsaG044571

KEGG: -
GO: GO:0000902 GO:0003674 GO:0003824 GO:0006464 GO:0006473 GO:0006807 GO:0007154 GO:0007165 GO:0007275 GO:0008080 GO:0008150 GO:0008152 GO:0009314 GO:0009416 GO:0009628 GO:0009639 GO:0009640 GO:0009653 GO:0009719 GO:0009723 GO:0009725 GO:0009733 GO:0009734 GO:0009755 GO:0009791 GO:0009826 GO:0009987 GO:0010033 GO:0016043 GO:0016049 GO:0016407 GO:0016410 GO:0016740 GO:0016746 GO:0016747 GO:0019538 GO:0023052 GO:0032501 GO:0032502 GO:0032870 GO:0032989 GO:0036211 GO:0040007 GO:0042221 GO:0043170 GO:0043412 GO:0043543 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0048589 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060560 GO:0065007 GO:0070887 GO:0071310 GO:0071365 GO:0071495 GO:0071704 GO:0071840 GO:1901564
PFAM: PF00583.28

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG044571	XP_013457495.1	98.058	412	7	1	1	412	1	411	0.0	833

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG044571	sp\|O64815\|HLS1L_ARATH	70.192	416	111	4	5	412	3	413	0.0	596

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG044571	tr\|A0A072UQ97\|A0A072UQ97_MEDTR	98.058	412	7	1	1	412	1	411	0.0	833

TFs/TRs:

Gene ID	Type	Classification
MsaG044571	TR	GNAT

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsaG000188	MsaG044571	0.809536	3.078495e-50	5.198738e-48
MsaG000744	MsaG044571	0.818068	4.143675e-52	8.663937e-50
MsaG000796	MsaG044571	0.804625	3.334081e-49	5.010752e-47
MsaG001397	MsaG044571	0.817989	4.315841e-52	9.005767e-50
MsaG001934	MsaG044571	0.802180	1.064160e-48	1.511610e-46
MsaG002146	MsaG044571	0.868591	1.178886e-65	1.288435e-62
MsaG002403	MsaG044571	0.832249	1.903435e-55	5.878410e-53
MsaG002473	MsaG044571	0.815853	1.295002e-51	2.557992e-49
MsaG002802	MsaG044571	0.827268	3.065323e-54	8.212330e-52
MsaG002885	MsaG044571	0.819583	1.882529e-52	4.094763e-50
MsaG003320	MsaG044571	0.801448	1.502256e-48	2.098682e-46
MsaG003335	MsaG044571	0.873518	2.845726e-67	3.834557e-64
MsaG003345	MsaG044571	0.804428	3.662643e-49	5.479592e-47
MsaG003373	MsaG044571	0.807253	9.394333e-50	1.501641e-47
MsaG003891	MsaG044571	0.819544	1.921869e-52	4.176012e-50
MsaG003908	MsaG044571	0.822686	3.657903e-53	8.640640e-51
MsaG003914	MsaG044571	0.810218	2.199318e-50	3.775720e-48
MsaG004141	MsaG044571	0.825529	7.923668e-54	2.022489e-51
MsaG004303	MsaG044571	0.811040	1.463200e-50	2.562995e-48
MsaG004653	MsaG044571	0.818983	2.575812e-52	5.515479e-50
MsaG004794	MsaG044571	0.814233	2.952892e-51	5.599163e-49
MsaG005024	MsaG044571	0.817521	5.496515e-52	1.133189e-49
MsaG005843	MsaG044571	0.812058	8.815026e-51	1.583035e-48
MsaG006143	MsaG044571	0.835513	2.931043e-56	9.969915e-54
MsaG006117	MsaG044571	0.811341	1.259826e-50	2.223105e-48
MsaG006240	MsaG044571	0.805276	2.439849e-49	3.722715e-47
MsaG006550	MsaG044571	0.802515	9.085136e-49	1.300494e-46
MsaG006940	MsaG044571	0.829221	1.042320e-54	2.949718e-52
MsaG007279	MsaG044571	0.813467	4.347402e-51	8.086345e-49
MsaG007821	MsaG044571	0.825993	6.157263e-54	1.592040e-51
MsaG007891	MsaG044571	0.818682	3.011464e-52	6.397541e-50
MsaG008052	MsaG044571	0.805580	2.108638e-49	3.240164e-47
MsaG008155	MsaG044571	0.806507	1.348869e-49	2.118595e-47
MsaG008603	MsaG044571	0.847561	2.020865e-59	1.008397e-56
MsaG008606	MsaG044571	0.806937	1.094972e-49	1.737249e-47
MsaG009117	MsaG044571	0.823357	2.554834e-53	6.146003e-51
MsaG009191	MsaG044571	0.854346	2.524363e-61	1.593363e-58
MsaG009192	MsaG044571	0.839517	2.788521e-57	1.072147e-54
MsaG009234	MsaG044571	0.801586	1.407768e-48	1.972808e-46
MsaG010644	MsaG044571	0.841963	6.415767e-58	2.664937e-55
MsaG010890	MsaG044571	0.818358	3.564482e-52	7.508878e-50
MsaG010955	MsaG044571	0.805104	2.650152e-49	4.027498e-47
MsaG011023	MsaG044571	0.830636	4.728791e-55	1.393569e-52
MsaG011222	MsaG044571	0.818753	2.902485e-52	6.177561e-50
MsaG011395	MsaG044571	0.815218	1.791067e-51	3.481444e-49
MsaG011397	MsaG044571	0.817871	4.586948e-52	9.542331e-50
MsaG011942	MsaG044571	0.804143	4.196491e-49	6.236965e-47
MsaG011955	MsaG044571	0.802704	8.309273e-49	1.194542e-46
MsaG011972	MsaG044571	0.825972	6.226690e-54	1.609059e-51
MsaG012017	MsaG044571	0.803344	6.135389e-49	8.951496e-47
MsaG012103	MsaG044571	0.821515	6.814300e-53	1.560000e-50
MsaG012237	MsaG044571	0.802149	1.079885e-48	1.532846e-46
MsaG012402	MsaG044571	0.815349	1.675223e-51	3.267133e-49
MsaG012445	MsaG044571	0.811199	1.352579e-50	2.378389e-48
MsaG012498	MsaG044571	0.802202	1.053153e-48	1.496721e-46
MsaG012529	MsaG044571	0.801703	1.332222e-48	1.871947e-46
MsaG041985	MsaG044571	0.831480	2.941660e-55	8.883431e-53
MsaG042070	MsaG044571	0.834111	6.578721e-56	2.145721e-53
MsaG042337	MsaG044571	0.825713	7.169392e-54	1.839363e-51
MsaG042456	MsaG044571	0.809252	3.538894e-50	5.935121e-48
MsaG043850	MsaG044571	0.856539	5.834917e-62	3.986924e-59
MsaG044105	MsaG044571	0.826269	5.295451e-54	1.379697e-51
MsaG044576	MsaG044571	0.808390	5.398975e-50	8.868741e-48
MsaG044571	MsaG045348	0.810892	1.574916e-50	2.748663e-48
MsaG044571	MsaG045717	0.804663	3.273892e-49	4.924582e-47
MsaG044571	MsaG046203	0.803033	7.112881e-49	1.030324e-46
MsaG044571	MsaG046528	0.802095	1.107824e-48	1.570556e-46
MsaG044571	MsaG046424	0.807158	9.840183e-50	1.569393e-47
MsaG044571	MsaG046611	0.807791	7.232016e-50	1.171029e-47
MsaG044571	MsaG046705	0.827107	3.348487e-54	8.930471e-52
MsaG044571	MsaG002430	0.800530	2.308439e-48	3.158781e-46
MsaG044571	MsaG000283	0.817355	5.989372e-52	1.229528e-49
MsaG044571	MsaG003294	0.830829	4.242940e-55	1.257396e-52
MsaG044571	MsaG009468	0.818294	3.685708e-52	7.751273e-50
MsaG044571	MsaG008632	0.809698	2.842455e-50	4.818783e-48
MsaG044571	MsaG008804	0.809392	3.303502e-50	5.559211e-48
MsaG044571	MsaG014406	0.808478	5.171904e-50	8.513997e-48
MsaG044571	MsaG014412	0.805619	2.069405e-49	3.182849e-47
MsaG044571	MsaG013859	0.801636	1.375234e-48	1.929437e-46
MsaG044571	MsaG013069	0.801519	1.453054e-48	2.033183e-46
MsaG044571	MsaG013930	0.802671	8.442369e-49	1.212781e-46
MsaG044571	MsaG011821	0.805555	2.134539e-49	3.277987e-47
MsaG044571	MsaG023430	0.815363	1.663521e-51	3.245392e-49
MsaG044571	MsaG020286	0.813427	4.436387e-51	8.243750e-49
MsaG044571	MsaG018949	0.802700	8.324434e-49	1.196619e-46
MsaG044571	MsaG019915	0.818550	3.226412e-52	6.830483e-50
MsaG044571	MsaG027442	0.804637	3.314882e-49	4.983269e-47
MsaG044571	MsaG027436	0.808519	5.070779e-50	8.355655e-48
MsaG044571	MsaG028220	0.804447	3.629486e-49	5.432335e-47
MsaG044571	MsaG029783	0.803676	5.240709e-49	7.705096e-47
MsaG044571	MsaG031223	0.805539	2.151137e-49	3.302246e-47
MsaG044571	MsaG030002	0.820661	1.069539e-52	2.393704e-50
MsaG044571	MsaG032292	0.804305	3.883382e-49	5.793524e-47
MsaG044571	MsaG029996	0.811264	1.309386e-50	2.306198e-48
MsaG044571	MsaG033176	0.812500	7.066548e-51	1.283088e-48
MsaG044571	MsaG030025	0.822156	4.850140e-53	1.129495e-50
MsaG044571	MsaG032084	0.811004	1.489612e-50	2.606911e-48
MsaG044571	MsaG038283	0.802457	9.340054e-49	1.335194e-46
MsaG044571	MsaG036115	0.801802	1.271625e-48	1.790861e-46
MsaG044571	MsaG036408	0.816525	9.182495e-52	1.845117e-49
MsaG044571	MsaG045465	0.804237	4.012136e-49	5.976087e-47
MsaG044571	MsaG043209	0.803245	6.431209e-49	9.361654e-47
MsaG044571	MsaG043306	0.802179	1.065073e-48	1.512842e-46
MsaG044571	MsaG043061	0.806604	1.286806e-49	2.025779e-47
MsaG012639	MsaG044571	0.802297	1.007112e-48	1.434451e-46
MsaG012754	MsaG044571	0.800324	2.542039e-48	3.462153e-46
MsaG013264	MsaG044571	0.863405	5.062809e-64	4.489678e-61
MsaG013574	MsaG044571	0.801387	1.545664e-48	2.156330e-46
MsaG013883	MsaG044571	0.802281	1.014631e-48	1.444601e-46
MsaG013974	MsaG044571	0.800872	1.967482e-48	2.713026e-46
MsaG014290	MsaG044571	0.814065	3.214704e-51	6.069793e-49
MsaG014465	MsaG044571	0.801642	1.370824e-48	1.923557e-46
MsaG015258	MsaG044571	0.806115	1.629593e-49	2.535810e-47
MsaG015331	MsaG044571	0.843092	3.230339e-58	1.391166e-55
MsaG015441	MsaG044571	0.809314	3.432614e-50	5.765349e-48
MsaG016172	MsaG044571	0.803872	4.773828e-49	7.050551e-47
MsaG016329	MsaG044571	0.803186	6.615306e-49	9.616534e-47
MsaG016433	MsaG044571	0.814788	2.228475e-51	4.284868e-49
MsaG016511	MsaG044571	0.833617	8.734132e-56	2.807691e-53
MsaG017003	MsaG044571	0.815601	1.473254e-51	2.891618e-49
MsaG017271	MsaG044571	0.809566	3.032243e-50	5.124450e-48
MsaG017348	MsaG044571	0.807837	7.073804e-50	1.146659e-47
MsaG017463	MsaG044571	0.825269	9.122461e-54	2.311770e-51
MsaG017529	MsaG044571	0.808294	5.660139e-50	9.276387e-48
MsaG017551	MsaG044571	0.802603	8.717855e-49	1.250427e-46
MsaG017627	MsaG044571	0.810303	2.108755e-50	3.627813e-48
MsaG017630	MsaG044571	0.800650	2.182793e-48	2.994991e-46
MsaG017846	MsaG044571	0.813554	4.159717e-51	7.754395e-49
MsaG017870	MsaG044571	0.807750	7.379142e-50	1.193660e-47
MsaG018082	MsaG044571	0.828736	1.364189e-54	3.808256e-52
MsaG018118	MsaG044571	0.817865	4.602050e-52	9.572138e-50
MsaG018861	MsaG044571	0.805518	2.172545e-49	3.333503e-47
MsaG018960	MsaG044571	0.812044	8.875818e-51	1.593451e-48
MsaG019188	MsaG044571	0.811782	1.011639e-50	1.804523e-48
MsaG020418	MsaG044571	0.826661	4.275295e-54	1.126125e-51
MsaG020650	MsaG044571	0.806364	1.445247e-49	2.262292e-47
MsaG020732	MsaG044571	0.808604	4.862685e-50	8.029169e-48
MsaG020716	MsaG044571	0.815296	1.720837e-51	3.351545e-49
MsaG020766	MsaG044571	0.813168	5.054102e-51	9.330762e-49
MsaG020834	MsaG044571	0.817076	6.915203e-52	1.409470e-49
MsaG020981	MsaG044571	0.812235	8.069638e-51	1.455499e-48
MsaG021342	MsaG044571	0.822754	3.526359e-53	8.345765e-51
MsaG021446	MsaG044571	0.801693	1.338746e-48	1.880682e-46
MsaG022007	MsaG044571	0.815335	1.687296e-51	3.289464e-49
MsaG022362	MsaG044571	0.815134	1.869349e-51	3.625696e-49
MsaG022474	MsaG044571	0.807328	9.058329e-50	1.450557e-47
MsaG022476	MsaG044571	0.806673	1.244313e-49	1.962046e-47
MsaG022627	MsaG044571	0.816851	7.764590e-52	1.573342e-49
MsaG023264	MsaG044571	0.822165	4.827568e-53	1.124477e-50
MsaG023567	MsaG044571	0.814714	2.313271e-51	4.439562e-49
MsaG023537	MsaG044571	0.813901	3.492374e-51	6.567227e-49
MsaG023641	MsaG044571	0.803290	6.295113e-49	9.173003e-47
MsaG024116	MsaG044571	0.832632	1.531137e-55	4.781585e-53
MsaG024781	MsaG044571	0.807567	8.066814e-50	1.299147e-47
MsaG025367	MsaG044571	0.862380	1.045525e-63	8.905119e-61
MsaG026689	MsaG044571	0.809188	3.652139e-50	6.115639e-48
MsaG026820	MsaG044571	0.803838	4.853544e-49	7.162473e-47
MsaG027248	MsaG044571	0.808890	4.227921e-50	7.029442e-48
MsaG027567	MsaG044571	0.815472	1.573383e-51	3.077993e-49
MsaG027725	MsaG044571	0.828225	1.810117e-54	4.981344e-52
MsaG028107	MsaG044571	0.829874	7.245030e-55	2.089282e-52
MsaG028192	MsaG044571	0.808406	5.356620e-50	8.802604e-48
MsaG028343	MsaG044571	0.808727	4.579691e-50	7.584628e-48
MsaG028515	MsaG044571	0.823746	2.074470e-53	5.043238e-51
MsaG028480	MsaG044571	0.818351	3.577369e-52	7.534641e-50
MsaG028620	MsaG044571	0.803304	6.253269e-49	9.114987e-47
MsaG028802	MsaG044571	0.820249	1.328163e-52	2.940624e-50
MsaG028844	MsaG044571	0.808954	4.096196e-50	6.821009e-48
MsaG029005	MsaG044571	0.801391	1.542635e-48	2.152310e-46
MsaG029580	MsaG044571	0.813675	3.914660e-51	7.319510e-49
MsaG029742	MsaG044571	0.800882	1.958785e-48	2.701604e-46
MsaG029837	MsaG044571	0.824234	1.595676e-53	3.930836e-51
MsaG030445	MsaG044571	0.822403	4.251410e-53	9.966812e-51
MsaG030355	MsaG044571	0.821103	8.471581e-53	1.918373e-50
MsaG030806	MsaG044571	0.833764	8.026235e-56	2.591274e-53
MsaG030899	MsaG044571	0.801252	1.646795e-48	2.290333e-46
MsaG031352	MsaG044571	0.870922	2.063041e-66	2.485996e-63
MsaG031386	MsaG044571	0.813478	4.322586e-51	8.042486e-49
MsaG031414	MsaG044571	0.829505	8.899109e-55	2.539229e-52
MsaG031404	MsaG044571	0.809161	3.700814e-50	6.193234e-48
MsaG031494	MsaG044571	0.821918	5.504276e-53	1.273667e-50
MsaG031584	MsaG044571	0.813184	5.012201e-51	9.257289e-49
MsaG031781	MsaG044571	0.820359	1.253686e-52	2.783674e-50
MsaG032000	MsaG044571	0.837208	1.090908e-56	3.905117e-54
MsaG032180	MsaG044571	0.874710	1.129027e-67	1.603037e-64
MsaG032399	MsaG044571	0.819262	2.226454e-52	4.802576e-50
MsaG033598	MsaG044571	0.811975	9.185354e-51	1.646274e-48
MsaG033640	MsaG044571	0.802048	1.132492e-48	1.603832e-46
MsaG034175	MsaG044571	0.827816	2.267627e-54	6.169419e-52
MsaG034225	MsaG044571	0.848314	1.255305e-59	6.423961e-57
MsaG034364	MsaG044571	0.803396	5.987278e-49	8.745842e-47
MsaG034661	MsaG044571	0.862678	8.473704e-64	7.301928e-61
MsaG035390	MsaG044571	0.857543	2.960166e-62	2.098510e-59
MsaG035391	MsaG044571	0.882918	1.486049e-70	3.078369e-67
MsaG035645	MsaG044571	0.802264	1.022847e-48	1.455732e-46
MsaG036068	MsaG044571	0.834940	4.082215e-56	1.364911e-53
MsaG036173	MsaG044571	0.807211	9.588438e-50	1.531145e-47
MsaG036521	MsaG044571	0.828238	1.796989e-54	4.946999e-52
MsaG036634	MsaG044571	0.808337	5.541023e-50	9.090526e-48
MsaG037008	MsaG044571	0.805783	1.912493e-49	2.952804e-47
MsaG037921	MsaG044571	0.811243	1.322760e-50	2.328552e-48
MsaG039573	MsaG044571	0.809528	3.090386e-50	5.217833e-48
MsaG040027	MsaG044571	0.806695	1.231148e-49	1.942322e-47
MsaG040261	MsaG044571	0.848696	9.856772e-60	5.109628e-57
MsaG040352	MsaG044571	0.803475	5.766693e-49	8.438930e-47
MsaG040380	MsaG044571	0.803330	6.178209e-49	9.010826e-47
MsaG040613	MsaG044571	0.809573	3.022968e-50	5.109567e-48
MsaG040850	MsaG044571	0.823133	2.880356e-53	6.886836e-51
MsaG040926	MsaG044571	0.820484	1.173731e-52	2.614780e-50

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG044571	MtrunA17_Chr4g0053961	98.058	412	7	1	1	412	1	411	0.0	833
MsaG044571	MtrunA17_Chr5g0401351	71.078	408	107	4	5	412	7	403	0.0	609
MsaG044571	MtrunA17_Chr4g0001411	47.381	420	182	9	3	412	19	409	1.24e-124	366
MsaG044571	MtrunA17_Chr3g0105631	48.872	399	172	7	17	411	17	387	1.47e-120	355
MsaG044571	MtrunA17_Chr4g0068331	33.729	421	240	12	7	412	11	407	1.25e-62	207

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG044571	AT2G23060.1	70.192	416	111	4	5	412	3	413	0.0	596
MsaG044571	AT4G37580.1	70.762	407	109	3	9	412	4	403	0.0	576
MsaG044571	AT4G37580.2	71.182	347	93	2	66	412	7	346	1.48e-175	494
MsaG044571	AT5G67430.1	62.162	407	127	8	6	412	7	386	4.19e-174	491
MsaG044571	AT2G23060.2	73.214	280	74	1	133	412	1	279	1.34e-152	433
MsaG044571	AT5G67430.2	62.573	342	106	7	70	411	1	320	8.95e-146	417
MsaG044571	AT2G30090.1	41.849	411	191	7	9	411	15	385	7.60e-99	300

Find 84 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CGTCGTTTGGTGTGAGTTTA+AGG	0.156297	8:-62163809	None:intergenic
CATAATCTTGCTATGGAAAA+TGG	0.159585	8:+62164251	MsaT044571.1:CDS
ACACTTTCTCTATCTTTATT+AGG	0.193995	8:-62163161	None:intergenic
ATTCCCATTCTTCTATGATT+TGG	0.243356	8:-62163582	None:intergenic
GTTCCGAGAGACGGAAAATA+TGG	0.259285	8:+62163933	MsaT044571.1:CDS
TGTGGTGTATTAAGAGATTA+GGG	0.277467	8:+62164363	MsaT044571.1:CDS
TTCACCATCTTCAACACTTC+TGG	0.289161	8:-62164209	None:intergenic
GAGTTACGGACTCTGCAAAT+AGG	0.309584	8:-62163257	None:intergenic
TTGTGGTGTATTAAGAGATT+AGG	0.337855	8:+62164362	MsaT044571.1:CDS
GTGTTTACCCTCGAAGTAAA+AGG	0.339022	8:+62164047	MsaT044571.1:CDS
TTTGGATTTCATCTAATGTA+TGG	0.345767	8:+62164170	MsaT044571.1:CDS
CGTGGGCTTTAGTAAGTGTT+TGG	0.349245	8:+62164012	MsaT044571.1:CDS
GAACAATGGTTTCGTGAAAA+TGG	0.352645	8:+62163630	MsaT044571.1:CDS
TAGGCTAGTTTAGTGAAAAC+AGG	0.396155	8:-62163537	None:intergenic
TTGAGACGGTGTTTGAAAAC+GGG	0.405778	8:-62163762	None:intergenic
AAACTTAATTAAAACTCTCT+AGG	0.411336	8:-62164455	None:intergenic
ATAATCTTGCTATGGAAAAT+GGG	0.419756	8:+62164252	MsaT044571.1:CDS
AATGGGAATAGGACTAAAAC+TGG	0.424053	8:+62163596	MsaT044571.1:CDS
TATAGCAATTCAGCGTCGTT+TGG	0.426241	8:-62163822	None:intergenic
AATCATAGAAGAATGGGAAT+AGG	0.430636	8:+62163585	MsaT044571.1:CDS
TGTCTTGTGAAGAAGATTTG+TGG	0.432512	8:+62164345	MsaT044571.1:CDS
CTCTCCAAATCATAGAAGAA+TGG	0.438768	8:+62163578	MsaT044571.1:CDS
AGTTACGGACTCTGCAAATA+GGG	0.441613	8:-62163256	None:intergenic
GTCTCTCGGAACGGCTAAGA+AGG	0.443084	8:-62163922	None:intergenic
GTGATGGTTCTGTTGGTGAT+TGG	0.444763	8:+62164396	MsaT044571.1:CDS
ATGGGGCCGGATCAAATAAC+TGG	0.446614	8:+62163952	MsaT044571.1:CDS
CTTACCAGCATGAGAAAAGT+TGG	0.450426	8:-62163281	None:intergenic
TCTCCAAATCATAGAAGAAT+GGG	0.450649	8:+62163579	MsaT044571.1:CDS
TTTCATCTAATGTATGGAAT+TGG	0.454495	8:+62164176	MsaT044571.1:CDS
AGTGAAAACAGGGACATGAT+TGG	0.457232	8:-62163526	None:intergenic
GCCGGACCAGTTATTTGATC+CGG	0.460530	8:-62163958	None:intergenic
TTTGAGACGGTGTTTGAAAA+CGG	0.461617	8:-62163763	None:intergenic
TGAGAAAAGTTGGTGAGTTA+CGG	0.469288	8:-62163271	None:intergenic
TGATGGACCCACCGAGTTCG+TGG	0.472987	8:+62163994	MsaT044571.1:CDS
TTCTTAGCCGTTCCGAGAGA+CGG	0.475720	8:+62163924	MsaT044571.1:CDS
CTTTGAGTAACCACATTTGT+CGG	0.477857	8:-62163712	None:intergenic
GAGTTTAAGGATTGTTACTT+TGG	0.478195	8:-62163796	None:intergenic
TTCCGAGAGACGGAAAATAT+GGG	0.480561	8:+62163934	MsaT044571.1:CDS
GCCGGATCAAATAACTGGTC+CGG	0.494724	8:+62163957	MsaT044571.1:CDS
CATCTAATGTATGGAATTGG+TGG	0.508655	8:+62164179	MsaT044571.1:CDS
AACTTAATTAAAACTCTCTA+GGG	0.509353	8:-62164454	None:intergenic
GAAGAGGGAAAGTTTACCAC+TGG	0.510294	8:-62163216	None:intergenic
TAACAAGGATTGACGGTGTA+CGG	0.511747	8:-62163737	None:intergenic
TACATTAGATGAAATCCAAA+CGG	0.515685	8:-62164167	None:intergenic
ATCTAATGTATGGAATTGGT+GGG	0.530410	8:+62164180	MsaT044571.1:CDS
GTTTGAAAACGGGGTTAACA+AGG	0.535510	8:-62163752	None:intergenic
GATTGGACTAAATCCAAACC+TGG	0.541245	8:+62164413	MsaT044571.1:CDS
GATGGACCCACCGAGTTCGT+GGG	0.542101	8:+62163995	MsaT044571.1:CDS
TCCCTCTTCACCGACTTGCA+CGG	0.552369	8:+62163230	MsaT044571.1:CDS
GATTATAGTGATGGTTCTGT+TGG	0.554056	8:+62164389	MsaT044571.1:CDS
TTGCTAACACACGTCTCACG+CGG	0.558176	8:-62164076	None:intergenic
TTAGGGGAAGATTATAGTGA+TGG	0.558836	8:+62164380	MsaT044571.1:CDS
ATGTATGGAATTGGTGGGGA+AGG	0.560905	8:+62164185	MsaT044571.1:CDS
AGGACCAGAAGTGTTGAAGA+TGG	0.565220	8:+62164205	MsaT044571.1:CDS
GAGATAGGCAATGAGACAGT+CGG	0.571965	8:+62163414	MsaT044571.1:CDS
CACCGTGCAAGTCGGTGAAG+AGG	0.582711	8:-62163232	None:intergenic
TGATAGACAAGGCTTTACCT+TGG	0.583323	8:+62164111	MsaT044571.1:CDS
CTTACTAAAGCCCACGAACT+CGG	0.584602	8:-62164005	None:intergenic
ACCGTGCAAGTCGGTGAAGA+GGG	0.587032	8:-62163231	None:intergenic
GACTCTTAAGCCTAAAACGT+AGG	0.591943	8:-62163556	None:intergenic
AGAGACGGAAAATATGGGGC+CGG	0.595183	8:+62163939	MsaT044571.1:CDS
TGGTGCTGAGTATTCATACA+TGG	0.597000	8:+62163650	MsaT044571.1:CDS
ACGGGGTTAACAAGGATTGA+CGG	0.599326	8:-62163744	None:intergenic
TGCTAACACACGTCTCACGC+GGG	0.608765	8:-62164075	None:intergenic
CTAAAGCCCACGAACTCGGT+GGG	0.630773	8:-62164001	None:intergenic
ATATGTGAAGTTGGACCCAG+TGG	0.635969	8:+62163200	MsaT044571.1:CDS
AACAACTCGCGTGATAGACA+AGG	0.641023	8:+62164100	MsaT044571.1:CDS
TCTAATGTATGGAATTGGTG+GGG	0.644769	8:+62164181	MsaT044571.1:CDS
TGAGACGGTGTTTGAAAACG+GGG	0.645003	8:-62163761	None:intergenic
AAGAGGGAAAGTTTACCACT+GGG	0.649201	8:-62163215	None:intergenic
TCCGAGAGACGGAAAATATG+GGG	0.649828	8:+62163935	MsaT044571.1:CDS
ACTAAAGCCCACGAACTCGG+TGG	0.653999	8:-62164002	None:intergenic
AAGATGGTGAAAGCTTTGTG+TGG	0.659803	8:+62164221	MsaT044571.1:CDS
AATAGGGTCACCGTGCAAGT+CGG	0.663384	8:-62163240	None:intergenic
CAAGACAAAACCTTCCAATG+AGG	0.667319	8:-62164329	None:intergenic
CAGTGGTGGAGAATTTGTAA+CGG	0.668778	8:-62163845	None:intergenic
TGAGGAATAGCAAAACGTAA+CGG	0.672089	8:-62164311	None:intergenic
GGAAAATGGGTGTAGTGCTG+TGG	0.676685	8:+62164265	MsaT044571.1:CDS
AGGCTAGTTTAGTGAAAACA+GGG	0.690252	8:-62163536	None:intergenic
ATTGGACTAAATCCAAACCT+GGG	0.691102	8:+62164414	MsaT044571.1:CDS
TGTATCAAAACCGTTACATG+CGG	0.691594	8:+62163450	MsaT044571.1:CDS
AAAACAGAATCAATGTCACG+AGG	0.691646	8:-62163876	None:intergenic
GTGGTGTATTAAGAGATTAG+GGG	0.708222	8:+62164364	MsaT044571.1:CDS
GAGACAGTCGGAATGATACG+AGG	0.713167	8:+62163426	MsaT044571.1:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content

Chromosome	Type	Strat	End	Strand	Name
Chr8	gene	62163122	62164469	62163122	ID=MsaG044571
Chr8	mRNA	62163122	62164469	62163122	ID=MsaT044571.1;Parent=MsaG044571
Chr8	exon	62163122	62163298	62163122	ID=MsaT044571.1.exon1;Parent=MsaT044571.1
Chr8	CDS	62163122	62163298	62163122	ID=cds.MsaT044571.1;Parent=MsaT044571.1
Chr8	exon	62163408	62164469	62163408	ID=MsaT044571.1.exon2;Parent=MsaT044571.1
Chr8	CDS	62163408	62164469	62163408	ID=cds.MsaT044571.1;Parent=MsaT044571.1

Gene Sequence

>MsaT044571.1

ATGGGTGAAGTAGTAGTTGTGAATGTGAGAGAGTTTGATCCTAATAAAGATAGAGAAAGTGTTGAAGCAGTTGAAAAAATATGTGAAGTTGGACCCAGTGGTAAACTTTCCCTCTTCACCGACTTGCACGGTGACCCTATTTGCAGAGTCCGTAACTCACCAACTTTTCTCATGCTGGTAGCAGAGATAGGCAATGAGACAGTCGGAATGATACGAGGTTGTATCAAAACCGTTACATGCGGCAAAAAACTAACAAGACCAACAAAAAACACCACCACAGAAACAAATCAAAATTCCAATCATGTCCCTGTTTTCACTAAACTAGCCTACGTTTTAGGCTTAAGAGTCTCTCCAAATCATAGAAGAATGGGAATAGGACTAAAACTGGTAGAAAAAATGGAACAATGGTTTCGTGAAAATGGTGCTGAGTATTCATACATGGCTACCGAAAACGACAACGTTGCATCAGTTAAACTTTTCACCGACAAATGTGGTTACTCAAAGTTCCGTACACCGTCAATCCTTGTTAACCCCGTTTTCAAACACCGTCTCAAAACATCATCGTCCAAAGTAACAATCCTTAAACTCACACCAAACGACGCTGAATTGCTATACCGTTACAAATTCTCCACCACTGAGTTTTTTCCTCGTGACATTGATTCTGTTTTAAAAAACAAACTTACTCTTGGAACCTTCTTAGCCGTTCCGAGAGACGGAAAATATGGGGCCGGATCAAATAACTGGTCCGGCTCCGAAAGCTTTTTGATGGACCCACCGAGTTCGTGGGCTTTAGTAAGTGTTTGGAACTGCAAAGACGTGTTTACCCTCGAAGTAAAAGGCGCGTCCCGCGTGAGACGTGTGTTAGCAAAAACAACTCGCGTGATAGACAAGGCTTTACCTTGGTTAAAATTACCTTCGATTCCGAATTTTTTCAAACCGTTTGGATTTCATCTAATGTATGGAATTGGTGGGGAAGGACCAGAAGTGTTGAAGATGGTGAAAGCTTTGTGTGGTTTTGCTCATAATCTTGCTATGGAAAATGGGTGTAGTGCTGTGGCTACTGAAGTTTCTAGCTGTGAACCGTTACGTTTTGCTATTCCTCATTGGAAGGTTTTGTCTTGTGAAGAAGATTTGTGGTGTATTAAGAGATTAGGGGAAGATTATAGTGATGGTTCTGTTGGTGATTGGACTAAATCCAAACCTGGGTTCTCCATTTTTGTTGACCCTAGAGAGTTTTAA

Protein sequence

>MsaT044571.1

MGEVVVVNVREFDPNKDRESVEAVEKICEVGPSGKLSLFTDLHGDPICRVRNSPTFLMLVAEIGNETVGMIRGCIKTVTCGKKLTRPTKNTTTETNQNSNHVPVFTKLAYVLGLRVSPNHRRMGIGLKLVEKMEQWFRENGAEYSYMATENDNVASVKLFTDKCGYSKFRTPSILVNPVFKHRLKTSSSKVTILKLTPNDAELLYRYKFSTTEFFPRDIDSVLKNKLTLGTFLAVPRDGKYGAGSNNWSGSESFLMDPPSSWALVSVWNCKDVFTLEVKGASRVRRVLAKTTRVIDKALPWLKLPSIPNFFKPFGFHLMYGIGGEGPEVLKMVKALCGFAHNLAMENGCSAVATEVSSCEPLRFAIPHWKVLSCEEDLWCIKRLGEDYSDGSVGDWTKSKPGFSIFVDPREF*