AlfalfaGEDB | MsaG044665

M. sativa ssp. caerulea / MsaG044665

KEGG: -
GO: GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0008150 GO:0008283 GO:0009719 GO:0009725 GO:0009733 GO:0009787 GO:0009789 GO:0009889 GO:0009966 GO:0009967 GO:0009987 GO:0010033 GO:0010468 GO:0010556 GO:0010646 GO:0010647 GO:0019219 GO:0019222 GO:0023051 GO:0023056 GO:0031323 GO:0031326 GO:0032870 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044424 GO:0044464 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0051716 GO:0060255 GO:0065007 GO:0070887 GO:0071310 GO:0071365 GO:0071495 GO:0080090 GO:0097159 GO:0140110 GO:1901363 GO:1901419 GO:1901421 GO:1903506 GO:1905957 GO:1905959 GO:2000112 GO:2001141
PFAM: PF02365.18

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG044665	XP_003608633.1	96.393	305	10	1	1	305	1	304	0.0	610

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG044665	sp\|O49697\|NAC71_ARATH	61.633	245	82	4	3	243	2	238	1.94e-97	291

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG044665	tr\|G7JGH7\|G7JGH7_MEDTR	96.393	305	10	1	1	305	1	304	0.0	610

TFs/TRs:

Gene ID	Type	Classification
MsaG044665	TF	NAC

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsaG000140	MsaG044665	0.801662	1.358326e-48	1.906838e-46
MsaG000238	MsaG044665	0.815632	1.449691e-51	2.847672e-49
MsaG000446	MsaG044665	0.806716	1.219063e-49	1.924142e-47
MsaG000690	MsaG044665	0.800554	2.282525e-48	3.125027e-46
MsaG001322	MsaG044665	0.814571	2.487557e-51	4.756784e-49
MsaG003967	MsaG044665	0.810967	1.517412e-50	2.653128e-48
MsaG004101	MsaG044665	0.829425	9.303515e-55	2.648500e-52
MsaG004157	MsaG044665	0.818829	2.791031e-52	5.951981e-50
MsaG004845	MsaG044665	0.809729	2.798644e-50	4.748098e-48
MsaG005116	MsaG044665	0.810462	1.948531e-50	3.365328e-48
MsaG005521	MsaG044665	0.822041	5.153990e-53	1.196565e-50
MsaG006116	MsaG044665	0.860704	3.377520e-63	2.698035e-60
MsaG006590	MsaG044665	0.809219	3.596229e-50	6.026448e-48
MsaG008248	MsaG044665	0.843111	3.193555e-58	1.376176e-55
MsaG008264	MsaG044665	0.806870	1.131262e-49	1.792004e-47
MsaG008372	MsaG044665	0.802569	8.858200e-49	1.269568e-46
MsaG009060	MsaG044665	0.809513	3.112528e-50	5.253373e-48
MsaG009453	MsaG044665	0.815881	1.276524e-51	2.523320e-49
MsaG011783	MsaG044665	0.807326	9.067322e-50	1.451918e-47
MsaG012262	MsaG044665	0.813675	3.913599e-51	7.317635e-49
MsaG041874	MsaG044665	0.800606	2.228209e-48	3.054263e-46
MsaG042700	MsaG044665	0.826113	5.767082e-54	1.496133e-51
MsaG044312	MsaG044665	0.804396	3.719403e-49	5.560348e-47
MsaG044665	MsaG044711	0.908359	4.465705e-81	3.797010e-77
MsaG044665	MsaG045060	0.811695	1.056349e-50	1.880273e-48
MsaG044665	MsaG045323	0.814584	2.472076e-51	4.728644e-49
MsaG044665	MsaG045894	0.840216	1.837173e-57	7.220394e-55
MsaG044665	MsaG046084	0.806061	1.673058e-49	2.600113e-47
MsaG044665	MsaG046214	0.802132	1.088669e-48	1.544695e-46
MsaG044665	MsaG046215	0.804116	4.249550e-49	6.312061e-47
MsaG044665	MsaG001990	0.800892	1.949525e-48	2.689412e-46
MsaG044665	MsaG000819	0.822299	4.493450e-53	1.050468e-50
MsaG044665	MsaG009147	0.843268	2.901267e-58	1.256543e-55
MsaG044665	MsaG012407	0.815690	1.407824e-51	2.769413e-49
MsaG044665	MsaG012532	0.839088	3.598828e-57	1.365388e-54
MsaG044665	MsaG013377	0.826398	4.937481e-54	1.291065e-51
MsaG044665	MsaG019886	0.851221	1.951838e-60	1.103326e-57
MsaG044665	MsaG020018	0.815337	1.685699e-51	3.286509e-49
MsaG044665	MsaG019073	0.829065	1.136589e-54	3.202544e-52
MsaG044665	MsaG021171	0.801390	1.543526e-48	2.153486e-46
MsaG044665	MsaG032920	0.834805	4.413742e-56	1.469818e-53
MsaG044665	MsaG032120	0.818218	3.833110e-52	8.045776e-50
MsaG044665	MsaG032456	0.802200	1.054571e-48	1.498636e-46
MsaG044665	MsaG032451	0.826909	3.733838e-54	9.903018e-52
MsaG044665	MsaG031429	0.810740	1.698573e-50	2.953435e-48
MsaG044665	MsaG037076	0.806309	1.483769e-49	2.319608e-47
MsaG013630	MsaG044665	0.800182	2.716175e-48	3.687428e-46
MsaG013884	MsaG044665	0.809661	2.893557e-50	4.901127e-48
MsaG013912	MsaG044665	0.826730	4.116362e-54	1.086375e-51
MsaG014491	MsaG044665	0.811998	9.082959e-51	1.628807e-48
MsaG014492	MsaG044665	0.811997	9.087616e-51	1.629609e-48
MsaG014542	MsaG044665	0.807214	9.576073e-50	1.529266e-47
MsaG017552	MsaG044665	0.817308	6.135255e-52	1.257983e-49
MsaG019110	MsaG044665	0.820151	1.398398e-52	3.087999e-50
MsaG019335	MsaG044665	0.800261	2.618032e-48	3.560551e-46
MsaG019640	MsaG044665	0.802494	9.177431e-49	1.313053e-46
MsaG021053	MsaG044665	0.806176	1.582765e-49	2.466513e-47
MsaG021312	MsaG044665	0.826546	4.552796e-54	1.195391e-51
MsaG021483	MsaG044665	0.824746	1.210598e-53	3.024181e-51
MsaG022052	MsaG044665	0.801368	1.559339e-48	2.174466e-46
MsaG022456	MsaG044665	0.804004	4.484455e-49	6.643501e-47
MsaG023223	MsaG044665	0.829950	6.944143e-55	2.006835e-52
MsaG023786	MsaG044665	0.803427	5.898361e-49	8.622124e-47
MsaG023798	MsaG044665	0.819700	1.771216e-52	3.864520e-50
MsaG025489	MsaG044665	0.803577	5.493947e-49	8.058834e-47
MsaG026283	MsaG044665	0.803770	5.012474e-49	7.385469e-47
MsaG027595	MsaG044665	0.807058	1.032833e-49	1.643344e-47
MsaG027690	MsaG044665	0.827925	2.135403e-54	5.827418e-52
MsaG028088	MsaG044665	0.809815	2.683052e-50	4.561513e-48
MsaG028303	MsaG044665	0.809287	3.478571e-50	5.838766e-48
MsaG028306	MsaG044665	0.818898	2.691717e-52	5.750697e-50
MsaG028419	MsaG044665	0.801755	1.300049e-48	1.828900e-46
MsaG028742	MsaG044665	0.829139	1.091021e-54	3.080459e-52
MsaG029201	MsaG044665	0.802527	9.036413e-49	1.293854e-46
MsaG029341	MsaG044665	0.816542	9.101174e-52	1.829577e-49
MsaG029613	MsaG044665	0.830270	5.805462e-55	1.693170e-52
MsaG029932	MsaG044665	0.807948	6.698718e-50	1.088779e-47
MsaG031818	MsaG044665	0.807523	8.240465e-50	1.325751e-47
MsaG033734	MsaG044665	0.815732	1.377785e-51	2.713216e-49
MsaG033797	MsaG044665	0.833394	9.918449e-56	3.167473e-53
MsaG034256	MsaG044665	0.804371	3.762681e-49	5.621943e-47
MsaG035152	MsaG044665	0.803731	5.104708e-49	7.514884e-47
MsaG036394	MsaG044665	0.814259	2.913230e-51	5.527618e-49
MsaG039395	MsaG044665	0.812301	7.806955e-51	1.410465e-48
MsaG039429	MsaG044665	0.821883	5.606518e-53	1.296134e-50
MsaG039828	MsaG044665	0.800009	2.943897e-48	3.981234e-46
MsaG039847	MsaG044665	0.809160	3.703319e-50	6.197228e-48
MsaG040020	MsaG044665	0.840930	1.196873e-57	4.810942e-55
MsaG040435	MsaG044665	0.834933	4.098169e-56	1.369996e-53
MsaG040561	MsaG044665	0.807730	7.449965e-50	1.204564e-47
MsaG040538	MsaG044665	0.808275	5.711139e-50	9.355936e-48
MsaG040539	MsaG044665	0.834892	4.196092e-56	1.401029e-53

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG044665	MtrunA17_Chr4g0054791	96.393	305	10	1	1	305	1	304	0.0	610
MsaG044665	MtrunA17_Chr5g0400461	61.261	333	92	9	3	308	2	324	1.79e-130	375
MsaG044665	MtrunA17_Chr6g0481091	64.516	155	52	1	7	161	6	157	9.15e-68	212
MsaG044665	MtrunA17_Chr5g0433781	61.688	154	56	1	7	160	6	156	2.20e-62	209
MsaG044665	MtrunA17_Chr2g0309891	58.750	160	62	2	3	161	2	158	3.09e-62	201
MsaG044665	MtrunA17_Chr3g0109821	53.191	188	73	4	7	192	6	180	6.82e-62	208
MsaG044665	MtrunA17_Chr5g0405211	45.000	200	98	5	7	205	8	196	1.49e-51	174
MsaG044665	MtrunA17_Chr1g0201021	55.921	152	64	1	9	160	21	169	3.11e-51	178
MsaG044665	MtrunA17_Chr1g0200561	49.701	167	78	3	1	166	13	174	1.75e-50	171
MsaG044665	MtrunA17_Chr5g0428991	55.346	159	66	3	7	164	25	179	5.43e-49	172
MsaG044665	MtrunA17_Chr8g0372121	50.000	156	72	3	7	161	6	156	5.48e-49	166
MsaG044665	MtrunA17_Chr3g0128111	49.701	167	79	3	3	168	38	200	8.28e-49	163
MsaG044665	MtrunA17_Chr8g0384721	39.916	238	123	6	1	229	1	227	8.54e-49	164
MsaG044665	MtrunA17_Chr3g0128151	53.374	163	71	3	7	168	22	180	1.46e-48	171
MsaG044665	MtrunA17_Chr4g0056541	51.613	155	69	3	7	160	7	156	1.78e-48	166
MsaG044665	MtrunA17_Chr4g0018391	49.123	171	76	4	7	176	7	167	1.79e-48	165
MsaG044665	MtrunA17_Chr2g0309331	49.398	166	75	4	3	165	6	165	3.74e-48	164
MsaG044665	MtrunA17_Chr3g0130101	48.447	161	80	1	6	166	6	163	8.87e-48	164
MsaG044665	MtrunA17_Chr3g0130731	48.276	174	81	3	1	171	1	168	9.38e-48	162
MsaG044665	MtrunA17_Chr5g0398971	43.750	192	99	4	7	197	7	190	1.06e-47	163
MsaG044665	MtrunA17_Chr7g0252971	45.304	181	83	4	7	177	8	182	1.12e-47	163
MsaG044665	MtrunA17_Chr2g0318081	45.810	179	92	2	5	183	14	187	1.63e-47	163
MsaG044665	MtrunA17_Chr3g0091921	47.647	170	82	3	5	172	14	178	2.90e-47	161
MsaG044665	MtrunA17_Chr4g0060931	47.619	168	81	3	7	172	17	179	3.14e-47	162
MsaG044665	MtrunA17_Chr4g0076731	52.632	152	66	3	9	160	56	201	5.88e-47	164
MsaG044665	MtrunA17_Chr2g0318101	47.879	165	72	4	7	160	15	176	7.24e-47	161
MsaG044665	MtrunA17_Chr2g0326361	46.067	178	87	4	7	179	14	187	9.29e-47	160
MsaG044665	MtrunA17_Chr4g0017921	51.613	155	68	3	7	160	8	156	1.12e-46	161
MsaG044665	MtrunA17_Chr8g0364791	48.125	160	80	1	7	166	6	162	1.16e-46	163
MsaG044665	MtrunA17_Chr7g0214071	49.367	158	72	3	3	160	11	160	3.89e-46	157
MsaG044665	MtrunA17_Chr1g0197361	51.553	161	73	4	2	161	3	159	6.61e-46	164
MsaG044665	MtrunA17_Chr4g0047841	53.191	141	63	2	7	147	15	152	7.34e-46	159
MsaG044665	MtrunA17_Chr3g0124761	45.556	180	89	3	1	177	1	174	1.10e-45	156
MsaG044665	MtrunA17_Chr8g0346001	42.051	195	96	4	1	183	9	198	3.51e-45	159
MsaG044665	MtrunA17_Chr4g0042561	48.795	166	74	4	7	167	9	168	3.94e-45	154
MsaG044665	MtrunA17_Chr8g0359921	50.909	165	72	4	5	166	12	170	4.22e-45	156
MsaG044665	MtrunA17_Chr6g0484441	43.678	174	85	4	7	177	5	168	6.30e-45	155
MsaG044665	MtrunA17_Chr5g0417791	47.953	171	78	4	5	170	1	165	9.28e-45	153
MsaG044665	MtrunA17_Chr7g0263931	38.767	227	128	5	5	224	9	231	1.38e-44	155
MsaG044665	MtrunA17_Chr5g0417001	42.157	204	106	5	6	200	13	213	1.52e-44	156
MsaG044665	MtrunA17_Chr3g0092671	50.625	160	72	5	4	161	2	156	1.70e-44	159
MsaG044665	MtrunA17_Chr2g0316971	55.725	131	55	2	7	137	23	150	2.03e-44	155
MsaG044665	MtrunA17_Chr1g0147421	40.865	208	113	6	7	212	27	226	2.80e-44	155
MsaG044665	MtrunA17_Chr6g0453451	47.853	163	78	3	7	167	20	177	5.29e-44	153
MsaG044665	MtrunA17_Chr3g0139331	40.845	213	119	4	7	217	11	218	5.85e-44	154
MsaG044665	MtrunA17_Chr8g0361731	45.402	174	83	4	6	170	13	183	6.58e-44	155
MsaG044665	MtrunA17_Chr8g0384201	45.625	160	84	1	7	166	6	162	1.40e-43	155
MsaG044665	MtrunA17_Chr1g0197351	51.553	161	69	2	7	161	42	199	1.84e-43	155
MsaG044665	MtrunA17_Chr6g0453131	47.853	163	72	3	7	160	15	173	3.18e-43	153
MsaG044665	MtrunA17_Chr6g0461661	50.725	138	65	2	5	142	16	150	5.21e-43	152
MsaG044665	MtrunA17_Chr7g0253011	44.444	171	90	3	4	171	14	182	2.87e-42	150
MsaG044665	MtrunA17_Chr4g0038751	48.684	152	71	3	9	160	17	161	9.63e-41	144
MsaG044665	MtrunA17_Chr3g0144271	55.303	132	55	3	7	137	23	151	2.19e-40	146
MsaG044665	MtrunA17_Chr2g0311661	36.864	236	120	8	9	222	23	251	3.30e-40	142
MsaG044665	MtrunA17_Chr7g0217711	51.562	128	57	2	10	137	22	144	4.02e-40	139
MsaG044665	MtrunA17_Chr1g0183741	39.048	210	101	5	7	198	10	210	1.84e-39	140
MsaG044665	MtrunA17_Chr2g0311651	39.234	209	104	6	9	195	24	231	1.89e-39	141
MsaG044665	MtrunA17_Chr5g0442771	37.619	210	108	4	6	201	17	217	3.06e-39	140
MsaG044665	MtrunA17_Chr7g0217721	51.562	128	57	2	10	137	22	144	6.69e-39	140
MsaG044665	MtrunA17_Chr2g0312321	47.590	166	72	6	7	169	11	164	2.87e-38	137
MsaG044665	MtrunA17_Chr7g0261411	47.712	153	69	4	7	157	10	153	8.66e-38	136
MsaG044665	MtrunA17_Chr8g0345671	52.672	131	59	3	7	136	11	139	3.65e-37	137
MsaG044665	MtrunA17_Chr2g0321741	43.017	179	83	6	27	200	12	176	4.81e-37	135
MsaG044665	MtrunA17_Chr8g0385991	43.333	180	85	5	3	173	10	181	3.98e-36	130
MsaG044665	MtrunA17_Chr8g0345711	47.183	142	69	4	7	144	12	151	4.52e-35	125
MsaG044665	MtrunA17_Chr8g0345691	45.752	153	75	5	7	158	12	157	7.45e-34	128
MsaG044665	MtrunA17_Chr3g0131911	44.242	165	81	4	3	160	10	170	2.07e-33	123
MsaG044665	MtrunA17_Chr4g0026141	41.772	158	84	5	6	157	4	159	9.05e-33	122
MsaG044665	MtrunA17_Chr2g0321631	42.767	159	78	6	8	157	5	159	9.72e-33	121
MsaG044665	MtrunA17_Chr8g0345731	42.405	158	80	4	6	160	23	172	2.13e-32	118
MsaG044665	MtrunA17_Chr7g0266701	34.746	236	115	10	7	206	4	236	7.81e-32	119
MsaG044665	MtrunA17_Chr4g0050701	45.802	131	60	3	7	137	11	130	2.80e-31	116
MsaG044665	MtrunA17_Chr3g0113001	49.074	108	49	3	62	166	18	122	1.35e-27	109
MsaG044665	MtrunA17_Chr8g0345721	38.857	175	74	5	5	148	33	205	1.76e-25	101
MsaG044665	MtrunA17_Chr8g0345701	40.397	151	71	5	1	136	1	147	1.64e-24	97.8
MsaG044665	MtrunA17_Chr8g0345741	42.500	120	66	3	18	136	2	119	1.30e-23	94.7
MsaG044665	MtrunA17_Chr3g0113031	48.454	97	43	3	74	166	5	98	9.19e-21	90.1
MsaG044665	MtrunA17_Chr7g0243371	46.914	81	42	1	57	137	12	91	4.95e-19	81.3
MsaG044665	MtrunA17_Chr8g0384351	33.514	185	98	7	2	186	5	164	9.45e-18	79.7
MsaG044665	MtrunA17_Chr3g0130321	29.885	174	99	6	1	161	1	164	4.03e-13	67.4
MsaG044665	MtrunA17_Chr7g0251651	26.804	194	120	5	2	190	13	189	6.62e-13	66.6
MsaG044665	MtrunA17_Chr1g0194791	61.702	47	17	1	9	54	48	94	3.02e-12	62.4

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG044665	AT4G17980.2	54.849	299	120	7	3	297	2	289	3.78e-100	296
MsaG044665	AT4G17980.1	61.633	245	82	4	3	243	2	238	1.98e-98	291
MsaG044665	AT5G46590.1	52.189	297	131	5	3	297	2	289	6.47e-96	286
MsaG044665	AT5G46590.2	50.000	296	128	5	3	297	2	278	2.79e-90	271
MsaG044665	AT1G32510.1	60.262	229	71	5	6	228	5	219	1.74e-82	251
MsaG044665	AT3G17730.1	56.983	179	68	2	7	179	6	181	4.97e-66	208
MsaG044665	AT1G54330.1	65.806	155	47	2	7	161	6	154	3.33e-65	207
MsaG044665	AT1G65910.1	60.870	161	60	1	7	167	6	163	3.48e-64	214
MsaG044665	AT3G03200.1	61.935	155	55	2	7	160	6	157	6.87e-62	204
MsaG044665	AT5G17260.1	60.645	155	57	2	7	160	6	157	8.56e-62	204
MsaG044665	AT3G10500.1	54.194	155	68	1	7	161	9	160	2.19e-52	181
MsaG044665	AT5G04410.1	54.839	155	67	1	7	161	9	160	2.08e-51	179
MsaG044665	AT1G33060.2	53.988	163	68	2	2	160	15	174	5.02e-50	176
MsaG044665	AT1G33060.1	53.988	163	68	2	2	160	15	174	5.25e-50	176
MsaG044665	AT1G12260.2	46.500	200	92	6	7	201	7	196	7.33e-50	169
MsaG044665	AT1G71930.2	40.741	216	117	4	7	216	9	219	7.36e-50	169
MsaG044665	AT1G71930.1	40.741	216	117	4	7	216	9	219	7.36e-50	169
MsaG044665	AT3G10490.1	53.459	159	70	2	4	161	24	179	8.05e-50	166
MsaG044665	AT4G35580.1	51.099	182	84	3	7	187	9	186	8.49e-50	173
MsaG044665	AT5G22290.1	51.235	162	68	5	1	162	16	166	9.19e-50	169
MsaG044665	AT4G35580.3	51.099	182	84	3	7	187	9	186	9.75e-50	173
MsaG044665	AT4G35580.2	51.099	182	84	3	7	187	9	186	1.11e-49	173
MsaG044665	AT4G36160.1	52.258	155	68	3	7	160	10	159	1.28e-49	169
MsaG044665	AT4G36160.3	52.258	155	68	3	7	160	10	159	1.28e-49	169
MsaG044665	AT5G07680.2	49.405	168	78	3	7	172	3	165	1.43e-49	168
MsaG044665	AT4G36160.2	52.258	155	68	3	7	160	14	163	1.69e-49	169
MsaG044665	AT5G07680.1	49.405	168	78	3	7	172	17	179	1.80e-49	168
MsaG044665	AT3G44290.2	51.299	154	64	4	9	162	16	158	2.07e-49	164
MsaG044665	AT1G12260.1	46.500	200	92	6	7	201	7	196	2.07e-49	169
MsaG044665	AT3G49530.2	52.229	157	71	3	7	162	13	166	3.56e-49	169
MsaG044665	AT2G18060.3	47.674	172	78	4	7	177	9	169	5.48e-49	167
MsaG044665	AT2G18060.1	47.674	172	78	4	7	177	9	169	5.48e-49	167
MsaG044665	AT3G10480.2	53.165	158	71	1	4	161	24	178	9.80e-49	169
MsaG044665	AT3G49530.1	52.229	157	71	3	7	162	13	166	1.07e-48	169
MsaG044665	AT5G09330.5	47.561	164	83	1	3	166	2	162	1.50e-48	169
MsaG044665	AT5G09330.2	47.561	164	83	1	3	166	2	162	1.50e-48	169
MsaG044665	AT5G09330.4	47.561	164	83	1	3	166	2	162	1.50e-48	169
MsaG044665	AT5G09330.3	47.561	164	83	1	3	166	2	162	1.50e-48	169
MsaG044665	AT5G09330.1	47.561	164	83	1	3	166	2	162	1.50e-48	169
MsaG044665	AT3G10480.1	52.830	159	71	2	4	161	24	179	1.64e-48	168
MsaG044665	AT5G66300.1	51.613	155	70	3	7	160	12	162	1.92e-48	164
MsaG044665	AT3G10490.2	53.459	159	70	2	4	161	24	179	2.05e-48	168
MsaG044665	AT3G44290.1	51.299	154	64	4	9	162	16	158	3.11e-48	165
MsaG044665	AT4G27410.2	49.112	169	81	2	5	173	12	175	3.25e-48	164
MsaG044665	AT2G02450.2	50.968	155	70	3	6	160	50	198	3.62e-48	167
MsaG044665	AT2G02450.1	50.968	155	70	3	6	160	50	198	3.67e-48	166
MsaG044665	AT5G61430.1	47.399	173	84	3	2	172	11	178	4.25e-48	164
MsaG044665	AT1G62700.1	51.613	155	69	3	7	160	7	156	5.46e-48	166
MsaG044665	AT1G62700.2	51.613	155	69	3	7	160	7	156	5.46e-48	166
MsaG044665	AT5G64060.1	46.341	164	85	1	3	166	2	162	6.33e-48	164
MsaG044665	AT5G62380.2	45.652	184	89	4	1	183	1	174	2.43e-47	163
MsaG044665	AT5G62380.1	45.652	184	89	4	1	183	1	174	2.43e-47	163
MsaG044665	AT1G32770.1	37.643	263	135	9	1	250	10	256	2.86e-47	163
MsaG044665	AT1G79580.3	52.795	161	66	4	3	160	13	166	7.76e-47	162
MsaG044665	AT1G79580.5	52.795	161	66	4	3	160	13	166	7.76e-47	162
MsaG044665	AT1G79580.4	52.795	161	66	4	3	160	13	166	7.76e-47	162
MsaG044665	AT1G79580.2	52.795	161	66	4	3	160	13	166	7.76e-47	162
MsaG044665	AT1G79580.1	52.795	161	66	4	3	160	13	166	7.76e-47	162
MsaG044665	AT2G24430.2	35.548	301	161	8	7	283	16	307	8.90e-47	160
MsaG044665	AT2G24430.1	35.548	301	161	8	7	283	16	307	8.90e-47	160
MsaG044665	AT5G24590.2	51.282	156	74	1	7	162	13	166	1.64e-46	163
MsaG044665	AT3G61910.1	42.157	204	97	5	1	188	5	203	1.70e-46	160
MsaG044665	AT1G52890.1	45.556	180	91	3	5	184	12	184	1.71e-46	160
MsaG044665	AT4G10350.1	50.289	173	74	6	7	173	9	175	2.48e-46	160
MsaG044665	AT5G39610.1	47.674	172	77	4	7	173	20	183	2.66e-46	158
MsaG044665	AT3G15500.1	47.024	168	84	2	5	172	12	174	2.70e-46	159
MsaG044665	AT5G08790.1	40.164	244	127	6	1	238	1	231	6.18e-46	157
MsaG044665	AT3G18400.1	47.826	161	78	3	7	167	5	159	6.86e-46	158
MsaG044665	AT1G61110.1	48.538	171	72	5	7	165	16	182	7.01e-46	158
MsaG044665	AT3G15170.1	43.721	215	104	5	6	215	19	221	8.45e-46	158
MsaG044665	AT2G27300.1	50.327	153	65	4	7	159	14	155	1.29e-45	158
MsaG044665	AT2G33480.2	50.943	159	68	3	2	160	10	158	1.51e-45	156
MsaG044665	AT2G33480.1	51.875	160	67	4	2	160	10	160	2.33e-45	155
MsaG044665	AT4G27410.3	46.448	183	80	3	5	172	12	191	4.08e-45	156
MsaG044665	AT1G69490.1	49.390	164	72	4	7	165	9	166	5.30e-45	154
MsaG044665	AT3G04070.2	48.503	167	75	4	7	164	10	174	5.32e-45	157
MsaG044665	AT3G29035.1	46.821	173	79	3	7	179	24	183	1.02e-44	155
MsaG044665	AT2G46770.1	42.714	199	82	6	1	178	10	197	1.23e-44	156
MsaG044665	AT1G33280.1	49.677	155	71	4	7	160	8	156	1.55e-44	154
MsaG044665	AT1G01720.1	47.953	171	77	4	1	166	1	164	2.53e-44	153
MsaG044665	AT5G63790.1	43.655	197	98	4	1	192	44	232	3.76e-44	154
MsaG044665	AT5G63790.2	43.655	197	98	4	1	192	54	242	5.62e-44	153
MsaG044665	AT3G04070.1	52.899	138	61	2	7	142	10	145	8.77e-44	154
MsaG044665	AT1G34190.1	53.957	139	61	1	2	140	11	146	9.48e-44	158
MsaG044665	AT3G04060.1	46.386	166	83	3	7	170	20	181	1.48e-43	152
MsaG044665	AT3G10480.3	44.792	192	69	3	4	161	24	212	1.79e-43	156
MsaG044665	AT1G76420.1	48.765	162	79	3	7	168	22	179	2.04e-43	152
MsaG044665	AT2G43000.1	48.366	153	73	3	9	160	20	167	3.49e-43	150
MsaG044665	AT3G15510.1	45.238	168	78	4	11	167	21	185	1.36e-42	151
MsaG044665	AT1G26870.1	41.129	248	119	9	1	226	12	254	3.46e-42	151
MsaG044665	AT1G34180.3	50.658	152	72	1	9	160	18	166	4.20e-42	151
MsaG044665	AT5G53950.1	52.941	136	61	2	7	142	17	149	5.28e-42	149
MsaG044665	AT5G13180.1	54.074	135	56	2	3	137	10	138	1.04e-41	145
MsaG044665	AT5G18270.2	46.951	164	73	4	7	164	21	176	1.33e-41	147
MsaG044665	AT5G39820.1	52.273	132	60	2	6	137	19	147	1.78e-41	147
MsaG044665	AT1G34180.1	50.327	153	73	1	9	161	18	167	2.31e-41	151
MsaG044665	AT5G18270.1	46.341	164	74	4	7	164	21	176	2.45e-41	147
MsaG044665	AT2G17040.1	44.737	152	77	2	9	160	8	152	5.31e-41	144
MsaG044665	AT1G77450.1	41.791	201	105	5	5	201	8	200	1.27e-40	142
MsaG044665	AT1G52880.1	47.239	163	75	4	11	164	21	181	1.66e-40	144
MsaG044665	AT1G32870.2	58.779	131	49	2	7	137	10	135	1.87e-39	145
MsaG044665	AT1G32870.1	58.779	131	49	2	7	137	10	135	2.02e-39	145
MsaG044665	AT3G12977.1	40.838	191	105	4	7	194	18	203	2.53e-39	140
MsaG044665	AT1G32870.3	58.779	131	49	2	7	137	46	171	4.18e-39	145
MsaG044665	AT1G34180.4	46.951	164	72	2	9	160	18	178	6.72e-39	143
MsaG044665	AT1G34180.2	46.667	165	73	2	9	161	18	179	2.67e-38	143
MsaG044665	AT3G12910.1	38.462	221	103	7	2	194	17	232	3.43e-37	135
MsaG044665	AT1G56010.2	45.963	161	74	5	7	161	19	172	5.03e-37	135
MsaG044665	AT5G04395.1	45.517	145	68	1	7	140	28	172	1.38e-36	130
MsaG044665	AT4G28530.1	43.503	177	71	6	7	164	10	176	1.22e-34	129
MsaG044665	AT5G22380.1	36.000	200	107	6	10	190	8	205	3.27e-30	115
MsaG044665	AT5G61430.2	49.550	111	51	2	64	172	8	115	1.64e-29	114
MsaG044665	AT3G44350.2	33.649	211	122	8	7	202	5	212	6.04e-27	106
MsaG044665	AT4G01550.1	38.636	176	101	4	10	184	7	176	6.24e-27	110
MsaG044665	AT5G64530.2	43.609	133	60	4	7	139	3	120	1.42e-26	103
MsaG044665	AT5G64530.1	43.609	133	60	4	7	139	3	120	2.70e-26	103
MsaG044665	AT1G02230.1	33.908	174	104	5	5	176	1	165	3.07e-26	107
MsaG044665	AT4G10350.2	52.212	113	47	4	64	173	20	128	9.23e-26	104
MsaG044665	AT4G01520.1	35.000	160	97	3	8	165	5	159	2.38e-25	103
MsaG044665	AT3G12977.2	50.505	99	45	2	64	161	20	115	8.06e-25	100
MsaG044665	AT1G02250.1	37.126	167	95	5	8	171	4	163	4.84e-24	101
MsaG044665	AT4G01540.4	34.810	158	96	3	10	165	7	159	1.02e-23	100
MsaG044665	AT4G28530.2	45.946	111	40	3	7	100	10	117	1.26e-23	99.4
MsaG044665	AT4G01540.2	26.403	303	189	9	10	306	7	281	1.65e-23	100
MsaG044665	AT4G01540.3	34.810	158	96	3	10	165	7	159	1.86e-23	100
MsaG044665	AT4G01540.1	26.403	303	189	9	10	306	7	281	2.74e-23	100
MsaG044665	AT1G56010.1	50.485	103	41	3	64	161	8	105	5.87e-23	96.3
MsaG044665	AT3G44350.1	37.410	139	82	4	7	142	5	141	1.17e-22	92.8
MsaG044665	AT2G33480.3	50.000	98	44	3	64	160	10	103	2.15e-22	93.6
MsaG044665	AT3G04420.2	38.462	130	75	3	8	135	4	130	9.21e-22	93.6
MsaG044665	AT3G04420.1	38.462	130	75	3	8	135	4	130	1.59e-21	94.0
MsaG044665	AT1G01010.1	30.198	202	121	8	10	199	6	199	7.57e-19	87.0
MsaG044665	AT1G02220.1	33.835	133	74	4	8	135	4	127	3.06e-17	82.0
MsaG044665	AT3G55210.1	34.014	147	80	4	4	137	8	150	2.20e-16	78.6
MsaG044665	AT3G56530.1	31.613	155	98	4	5	157	50	198	4.80e-16	77.8
MsaG044665	AT3G10490.4	49.383	81	37	2	82	161	2	79	4.82e-16	78.2
MsaG044665	AT3G10490.3	49.383	81	37	2	82	161	2	79	4.82e-16	78.2
MsaG044665	AT5G14000.2	31.429	140	87	3	1	138	9	141	1.74e-15	73.2
MsaG044665	AT5G50820.1	31.250	160	96	5	4	159	14	163	2.24e-15	73.9
MsaG044665	AT5G14000.1	27.461	193	128	4	1	191	9	191	2.28e-15	73.9
MsaG044665	AT2G43000.2	40.659	91	50	2	71	160	2	89	1.86e-13	68.6
MsaG044665	AT2G18060.2	44.595	74	36	2	87	160	2	70	2.63e-13	69.3
MsaG044665	AT5G22290.2	46.667	75	31	3	88	162	2	67	9.52e-13	67.4

Find 69 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TCATGGACTATAATGGAAAT+TGG	0.146738	8:-63290981	MsaT044665.1:CDS
CTATTTGTTCTTGATCCATT+TGG	0.249925	8:+63291989	None:intergenic
TCAGATAATGTAAGTCAAAA+TGG	0.276555	8:-63291039	MsaT044665.1:CDS
AAACCAATCCTTCAAACTTC+TGG	0.290622	8:-63291336	MsaT044665.1:CDS
GTTTGAAGGATTGGTTTCTA+TGG	0.297007	8:+63291342	None:intergenic
TATTTGTTCTTGATCCATTT+GGG	0.300747	8:+63291990	None:intergenic
GAAGAATCAAGAATCATATC+AGG	0.310654	8:+63291307	None:intergenic
GGGAATTTCATGGACTATAA+TGG	0.316926	8:-63290988	MsaT044665.1:CDS
TGAGGTCTCACTTCCATTGA+TGG	0.347267	8:+63291456	None:intergenic
ATTATATGTACCTTAAAATA+TGG	0.351863	8:+63291779	None:intergenic
TCCACTTGTTTGCCTTCAAA+TGG	0.357996	8:+63290834	None:intergenic
CAAGCAAGTCACCTGAATAA+TGG	0.364530	8:-63291406	MsaT044665.1:CDS
ATTTGATTATAAACCTCATA+AGG	0.374916	8:+63290952	None:intergenic
GGCTTTCCAGTAGCCAGCTT+TGG	0.387525	8:+63291961	None:intergenic
GATCCAGAAGTTTGAAGGAT+TGG	0.396961	8:+63291333	None:intergenic
AAGTTCTCAAGGGAATTTCA+TGG	0.401113	8:-63290998	MsaT044665.1:CDS
AACCATTCTAAATCTCGTTT+CGG	0.406610	8:+63292040	None:intergenic
CTTTAGGCGATAGAACTAAC+TGG	0.414854	8:-63291847	MsaT044665.1:CDS
CATGGACTATAATGGAAATT+GGG	0.418240	8:-63290980	MsaT044665.1:CDS
TATCTTGGAAGGGCTCCTTT+AGG	0.429258	8:-63291863	MsaT044665.1:CDS
AAATTGGGATGTTCCTTATG+AGG	0.431601	8:-63290965	MsaT044665.1:intron
TGAATCACCAAGGCAATCAT+TGG	0.432172	8:-63291121	MsaT044665.1:CDS
GAGCTACCAAAGCTGGCTAC+TGG	0.434106	8:-63291967	MsaT044665.1:CDS
ACATGGTTAAACTCGGCAAT+TGG	0.434194	8:+63291367	None:intergenic
TTTGCAGTTGCCTGTGATAG+TGG	0.456084	8:+63291898	None:intergenic
TTCCCTTGAGAACTTGAGTA+AGG	0.464374	8:+63291006	None:intergenic
TAGGATCAAGATCCATTTGA+AGG	0.465784	8:-63290846	MsaT044665.1:CDS
GGGGAGATCCAGAAGTTTGA+AGG	0.472729	8:+63291328	None:intergenic
TACCGAAACGAGATTTAGAA+TGG	0.473383	8:-63292042	MsaT044665.1:CDS
ACAAATAGAGCTACCAAAGC+TGG	0.483596	8:-63291974	MsaT044665.1:CDS
TATGATTCTTGATTCTTCAA+AGG	0.498256	8:-63291302	MsaT044665.1:intron
CTAGTTCTTCATCAGTTGGA+TGG	0.505033	8:+63292385	None:intergenic
CCAACTGATGAAGAACTAGT+TGG	0.507449	8:-63292381	MsaT044665.1:CDS
CAGTTAGTTCTATCGCCTAA+AGG	0.507948	8:+63291848	None:intergenic
CCAACTAGTTCTTCATCAGT+TGG	0.511441	8:+63292381	None:intergenic
CGAGATCTAAAGTACCCAAA+TGG	0.514202	8:-63292004	MsaT044665.1:CDS
AAATTTGAGTAGGATAAAGT+AGG	0.517258	8:+63291081	None:intergenic
ATACTATCTTAAAAGAAAAG+TGG	0.531146	8:-63292358	MsaT044665.1:CDS
TCACCTTACTCAAGTTCTCA+AGG	0.532937	8:-63291009	MsaT044665.1:CDS
TTTGATCCATGGGAGTTGCC+TGG	0.534126	8:-63292285	MsaT044665.1:intron
TGCCTTGGTGATTCACAACT+AGG	0.543287	8:+63291129	None:intergenic
GTTGCAACAAGTTCCATCAA+TGG	0.552945	8:-63291469	MsaT044665.1:CDS
ATATGTTCCAATGATTGCCT+TGG	0.556930	8:+63291114	None:intergenic
GCTGGCTACTGGAAAGCCAC+TGG	0.557528	8:-63291956	MsaT044665.1:CDS
TTCAGCATTAAAATTTGAGT+AGG	0.564818	8:+63291071	None:intergenic
AAGAATCAAGAATCATATCA+GGG	0.565558	8:+63291308	None:intergenic
GATTGGTTTCTATGGAAACA+TGG	0.569920	8:+63291350	None:intergenic
CCTTAAAATATGGAGAGTCT+TGG	0.569933	8:+63291789	None:intergenic
AAAAGAATGAGAAGAGCAAG+AGG	0.571312	8:-63291492	MsaT044665.1:CDS
TCCATTTGAAGGCAAACAAG+TGG	0.581226	8:-63290835	MsaT044665.1:CDS
TGTAGTTCATCCACTATCAC+AGG	0.581968	8:-63291908	MsaT044665.1:CDS
GTTGGATGGAAACGAAAACC+TGG	0.593509	8:+63292399	None:intergenic
ACTGGATCATGCAAGAGTAT+CGG	0.596245	8:-63291829	MsaT044665.1:CDS
TATGGAAACATGGTTAAACT+CGG	0.597037	8:+63291360	None:intergenic
CACCTTACTCAAGTTCTCAA+GGG	0.598211	8:-63291008	MsaT044665.1:CDS
AGATTACCAGGCAACTCCCA+TGG	0.598328	8:+63292279	None:intergenic
GAATAATGGATCACAAAATG+TGG	0.600990	8:-63291392	MsaT044665.1:CDS
GGAGCATTATTACTGCCACC+AGG	0.607504	8:-63292417	MsaT044665.1:CDS
GTCACTTGAGAATCTCATTG+AGG	0.608676	8:+63291438	None:intergenic
TATCTTAAAAGAAAAGTGGA+AGG	0.610976	8:-63292354	MsaT044665.1:CDS
AGAGTCTTGGCTAAGATCAT+CGG	0.612585	8:+63291802	None:intergenic
ACATTGCAATATAACATGGA+AGG	0.636691	8:-63292438	None:intergenic
AAGAGAGAAAGATTGTGTGC+CGG	0.639026	8:-63291931	MsaT044665.1:CDS
CTCCTAGTTGTGAATCACCA+AGG	0.645942	8:-63291131	MsaT044665.1:CDS
CTTGGTGATTCACAACTAGG+AGG	0.658943	8:+63291132	None:intergenic
AAAGAATGAGAAGAGCAAGA+GGG	0.661577	8:-63291491	MsaT044665.1:CDS
TGATAGTGGATGAACTACAC+CGG	0.698203	8:+63291912	None:intergenic
AGAATCAAGAATCATATCAG+GGG	0.707288	8:+63291309	None:intergenic
GGATGGAAACGAAAACCTGG+TGG	0.763193	8:+63292402	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content

Chromosome	Type	Strat	End	Strand	Name
Chr8	gene	63290812	63292445	63290812	ID=MsaG044665
Chr8	mRNA	63290812	63292445	63290812	ID=MsaT044665.1;Parent=MsaG044665
Chr8	exon	63290812	63290865	63290812	ID=MsaT044665.1.exon5;Parent=MsaT044665.1
Chr8	CDS	63290812	63290865	63290812	ID=cds.MsaT044665.1;Parent=MsaT044665.1
Chr8	exon	63290966	63291193	63290966	ID=MsaT044665.1.exon4;Parent=MsaT044665.1
Chr8	CDS	63290966	63291193	63290966	ID=cds.MsaT044665.1;Parent=MsaT044665.1
Chr8	exon	63291303	63291542	63291303	ID=MsaT044665.1.exon3;Parent=MsaT044665.1
Chr8	CDS	63291303	63291542	63291303	ID=cds.MsaT044665.1;Parent=MsaT044665.1
Chr8	exon	63291790	63292076	63291790	ID=MsaT044665.1.exon2;Parent=MsaT044665.1
Chr8	CDS	63291790	63292076	63291790	ID=cds.MsaT044665.1;Parent=MsaT044665.1
Chr8	exon	63292286	63292445	63292286	ID=MsaT044665.1.exon1;Parent=MsaT044665.1
Chr8	CDS	63292286	63292445	63292286	ID=cds.MsaT044665.1;Parent=MsaT044665.1

Gene Sequence

>MsaT044665.1

ATGGAAGGAGCATTATTACTGCCACCAGGTTTTCGTTTCCATCCAACTGATGAAGAACTAGTTGGATACTATCTTAAAAGAAAAGTGGAAGGACTTGAAATTGAACTTGATGTTATTCCAGTGATTGATTTTTACAAATTTGATCCATGGGAGTTGCCTGAGAAATCATTTCTACCGAAACGAGATTTAGAATGGTTTTTCTATTGTACGCGAGATCTAAAGTACCCAAATGGATCAAGAACAAATAGAGCTACCAAAGCTGGCTACTGGAAAGCCACTGGAAAAGAGAGAAAGATTGTGTGCCGGTGTAGTTCATCCACTATCACAGGCAACTGCAAAACACTTGTTTTCTATCTTGGAAGGGCTCCTTTAGGCGATAGAACTAACTGGATCATGCAAGAGTATCGGCTCACCGATGATCTTAGCCAAGACTCTCCATATTTTAAGGGTGGTTTAGCTTTGTGCCGAGTTATCAAAAAGAATGAGAAGAGCAAGAGGGTTGCAACAAGTTCCATCAATGGAAGTGAGACCTCAATGAGATTCTCAAGTGACGTTTCTTCTCAAGCAAGTCACCTGAATAATGGATCACAAAATGTGGCTCCAATTGCCGAGTTTAACCATGTTTCCATAGAAACCAATCCTTCAAACTTCTGGATCTCCCCTGATATGATTCTTGATTCTTCAAAGGAGTATACTAAAGTACAAGATGCACTGTTTGAATATTTTCCTCCTAGTTGTGAATCACCAAGGCAATCATTGGAACATATAACAACTTCACCTACTTTATCCTACTCAAATTTTAATGCTGAAAATGAATTTTCAGATAATGTAAGTCAAAATGGATGCATGTCACCTTACTCAAGTTCTCAAGGGAATTTCATGGACTATAATGGAAATTGGGATGTTCCTTATGAGGATCAAGATCCATTTGAAGGCAAACAAGTGGAGATTAGAGTTATTGATAAATAA

Protein sequence

>MsaT044665.1

MEGALLLPPGFRFHPTDEELVGYYLKRKVEGLEIELDVIPVIDFYKFDPWELPEKSFLPKRDLEWFFYCTRDLKYPNGSRTNRATKAGYWKATGKERKIVCRCSSSTITGNCKTLVFYLGRAPLGDRTNWIMQEYRLTDDLSQDSPYFKGGLALCRVIKKNEKSKRVATSSINGSETSMRFSSDVSSQASHLNNGSQNVAPIAEFNHVSIETNPSNFWISPDMILDSSKEYTKVQDALFEYFPPSCESPRQSLEHITTSPTLSYSNFNAENEFSDNVSQNGCMSPYSSSQGNFMDYNGNWDVPYEDQDPFEGKQVEIRVIDK*