AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa ssp. caerulea / MsaG044959

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG044959 MtrunA17_Chr4g0058241 99.766 428 1 0 1 428 1 428 0.0 890
MsaG044959 MtrunA17_Chr3g0116701 85.647 425 57 1 1 425 1 421 0.0 766
MsaG044959 MtrunA17_Chr3g0123491 73.430 414 104 4 14 423 9 420 0.0 618
MsaG044959 MtrunA17_Chr3g0139371 61.298 416 125 6 17 423 10 398 2.21e-180 508
MsaG044959 MtrunA17_Chr8g0369241 30.137 365 194 8 97 422 138 480 8.82e-46 169
MsaG044959 MtrunA17_Chr5g0437131 30.120 332 199 6 94 420 399 702 3.44e-43 161
MsaG044959 MtrunA17_Chr6g0480541 31.304 345 204 6 81 420 881 1197 3.95e-43 162
MsaG044959 MtrunA17_Chr1g0210061 29.469 414 236 13 31 424 549 926 1.23e-38 148
MsaG044959 MtrunA17_Chr8g0370321 29.657 408 209 13 82 426 21 413 1.02e-37 142
MsaG044959 MtrunA17_Chr5g0407121 28.180 401 216 11 82 420 21 411 1.36e-36 139
MsaG044959 MtrunA17_Chr6g0480481 31.513 238 109 6 81 318 17 200 7.25e-28 109
MsaG044959 MtrunA17_Chr1g0179611 38.217 157 90 4 84 233 29 185 2.84e-27 114
MsaG044959 MtrunA17_Chr1g0179611 30.286 175 87 6 263 420 319 475 2.20e-15 78.2
MsaG044959 MtrunA17_Chr8g0369451 29.167 336 174 11 97 423 3 283 6.33e-27 112
MsaG044959 MtrunA17_Chr2g0320631 37.342 158 92 4 84 234 25 182 1.85e-26 111
MsaG044959 MtrunA17_Chr2g0320631 29.688 192 114 5 243 423 296 477 2.11e-15 78.2
MsaG044959 MtrunA17_Chr4g0065851 28.107 338 189 10 96 423 23 316 4.41e-25 107
MsaG044959 MtrunA17_Chr5g0409421 28.190 337 176 11 97 423 3 283 5.36e-25 106
MsaG044959 MtrunA17_Chr4g0051261 27.844 334 185 9 97 423 3 287 5.71e-25 103
MsaG044959 MtrunA17_Chr7g0248461 27.607 326 185 9 104 423 44 324 6.99e-24 102
MsaG044959 MtrunA17_Chr8g0392811 27.536 345 184 13 95 423 114 408 7.97e-24 103
MsaG044959 MtrunA17_Chr8g0358921 27.190 331 184 11 103 423 52 335 1.16e-23 101
MsaG044959 MtrunA17_Chr2g0287271 28.107 338 189 10 96 423 23 316 1.27e-23 103
MsaG044959 MtrunA17_Chr4g0027671 36.306 157 93 4 84 233 24 180 3.11e-23 102
MsaG044959 MtrunA17_Chr4g0027671 29.412 170 103 3 262 423 318 478 7.56e-17 82.8
MsaG044959 MtrunA17_Chr4g0057791 28.571 336 192 11 96 423 216 511 1.33e-22 100
MsaG044959 MtrunA17_Chr5g0397261 27.439 328 183 10 104 423 47 327 1.48e-22 98.6
MsaG044959 MtrunA17_Chr2g0293491 27.893 337 181 11 97 423 3 287 1.87e-22 97.1
MsaG044959 MtrunA17_Chr3g0099951 24.412 340 198 10 92 423 8 296 2.67e-22 98.2
MsaG044959 MtrunA17_Chr6g0483151 25.073 343 192 13 91 423 7 294 2.72e-22 98.2
MsaG044959 MtrunA17_Chr3g0096631 28.367 349 176 13 95 423 22 316 3.58e-22 99.0
MsaG044959 MtrunA17_Chr6g0482681 26.286 350 204 10 84 423 75 380 3.82e-22 99.0
MsaG044959 MtrunA17_Chr4g0030151 26.946 334 177 12 104 423 45 325 5.21e-22 97.1
MsaG044959 MtrunA17_Chr4g0002001 28.367 349 180 14 97 423 3 303 5.82e-22 95.9
MsaG044959 MtrunA17_Chr8g0339221 26.706 337 180 14 98 423 4 284 1.04e-21 96.7
MsaG044959 MtrunA17_Chr4g0045841 24.332 337 202 10 94 423 50 340 3.16e-21 94.7
MsaG044959 MtrunA17_Chr8g0348481 26.769 325 187 9 104 422 43 322 4.66e-21 94.4
MsaG044959 MtrunA17_Chr4g0038501 28.326 233 136 4 87 315 9 214 1.04e-20 95.1
MsaG044959 MtrunA17_Chr8g0378831 25.278 360 209 11 75 422 7 318 1.73e-20 92.4
MsaG044959 MtrunA17_Chr4g0038091 28.755 233 135 4 87 315 9 214 2.04e-20 94.4
MsaG044959 MtrunA17_Chr3g0141871 24.011 354 208 10 83 423 14 319 2.18e-20 92.0
MsaG044959 MtrunA17_Chr2g0284091 26.163 344 183 10 95 423 37 324 2.23e-20 92.4
MsaG044959 MtrunA17_Chr1g0187371 24.716 352 200 10 87 423 7 308 5.27e-20 90.1
MsaG044959 MtrunA17_Chr2g0277011 25.959 339 172 12 104 423 96 374 7.56e-20 91.3
MsaG044959 MtrunA17_Chr1g0194201 26.629 353 170 14 95 423 72 359 9.72e-20 90.9
MsaG044959 MtrunA17_Chr1g0203881 28.000 275 156 8 93 357 36 278 1.22e-19 91.3
MsaG044959 MtrunA17_Chr2g0320011 25.215 349 180 12 95 423 85 372 2.17e-19 89.7
MsaG044959 MtrunA17_Chr7g0270371 25.501 349 179 12 95 423 72 359 2.49e-19 89.4
MsaG044959 MtrunA17_Chr2g0314321 27.247 356 188 9 95 423 22 333 3.06e-19 90.1
MsaG044959 MtrunA17_Chr3g0093391 25.664 339 190 11 103 423 28 322 3.73e-19 89.7
MsaG044959 MtrunA17_Chr4g0030231 25.490 357 198 13 83 422 20 325 5.06e-19 88.2
MsaG044959 MtrunA17_Chr8g0359091 27.434 339 192 11 95 423 23 317 6.64e-19 89.0
MsaG044959 MtrunA17_Chr3g0093571 25.588 340 189 11 103 423 30 324 1.09e-18 88.2
MsaG044959 MtrunA17_Chr3g0102571 28.829 222 108 6 206 422 189 365 1.82e-18 87.0
MsaG044959 MtrunA17_Chr8g0350311 25.429 350 178 13 95 423 136 423 2.06e-18 87.0
MsaG044959 MtrunA17_Chr1g0170551 26.809 235 130 6 97 323 6 206 2.24e-18 88.2
MsaG044959 MtrunA17_Chr1g0193081 24.857 350 180 13 95 423 72 359 3.69e-18 85.9
MsaG044959 MtrunA17_Chr3g0127571 30.488 246 129 9 87 320 127 342 4.57e-18 86.7
MsaG044959 MtrunA17_Chr3g0122781 28.783 337 191 11 102 423 420 722 4.57e-18 86.7
MsaG044959 MtrunA17_Chr6g0478601 28.916 249 144 9 98 328 111 344 1.39e-17 84.7
MsaG044959 MtrunA17_Chr7g0246591 24.207 347 180 12 98 423 141 425 2.37e-17 84.0
MsaG044959 MtrunA17_Chr3g0130781 24.603 378 196 13 83 423 3 328 2.38e-17 84.0
MsaG044959 MtrunA17_Chr1g0190131 25.275 273 165 6 92 357 3 243 2.94e-17 81.6
MsaG044959 MtrunA17_Chr7g0258051 22.295 305 196 8 98 396 16 285 3.77e-17 84.0
MsaG044959 MtrunA17_Chr5g0402551 28.455 246 134 9 87 320 123 338 5.00e-17 83.2
MsaG044959 MtrunA17_Chr8g0384301 24.269 342 170 12 96 427 297 559 6.24e-17 83.2
MsaG044959 MtrunA17_Chr8g0377071 26.946 334 186 11 102 423 389 676 8.78e-17 82.8
MsaG044959 MtrunA17_Chr1g0205931 26.070 257 157 7 97 343 54 287 8.79e-17 82.8
MsaG044959 MtrunA17_Chr1g0201571 25.260 289 149 8 72 337 100 344 2.06e-16 81.3
MsaG044959 MtrunA17_Chr7g0257751 27.234 235 133 8 90 316 50 254 2.18e-16 81.3
MsaG044959 MtrunA17_Chr8g0387401 25.076 327 192 9 104 423 58 338 3.25e-16 80.1
MsaG044959 MtrunA17_Chr7g0218071 25.970 335 196 11 95 423 117 405 3.90e-16 80.9
MsaG044959 MtrunA17_Chr4g0061141 26.220 328 187 11 103 423 110 389 9.41e-16 79.7
MsaG044959 MtrunA17_Chr4g0018201 28.390 236 141 7 98 316 759 983 1.27e-15 79.3
MsaG044959 MtrunA17_Chr1g0176421 26.638 229 138 6 92 316 155 357 1.37e-15 79.0
MsaG044959 MtrunA17_Chr5g0428981 27.966 236 142 7 98 316 763 987 1.84e-15 79.0
MsaG044959 MtrunA17_Chr5g0419441 25.000 228 140 4 92 316 233 432 2.13e-15 78.6
MsaG044959 MtrunA17_Chr6g0453711 25.970 335 189 11 98 423 110 394 2.77e-15 78.2
MsaG044959 MtrunA17_Chr7g0245031 25.764 229 133 7 98 320 148 345 3.75e-15 77.4
MsaG044959 MtrunA17_Chr7g0242561 26.389 288 161 11 44 316 1 252 4.33e-15 77.4
MsaG044959 MtrunA17_Chr3g0130151 22.754 334 169 10 104 427 250 504 3.42e-14 74.7
MsaG044959 MtrunA17_Chr1g0157131 23.810 336 171 10 94 420 70 329 3.57e-14 74.3
MsaG044959 MtrunA17_Chr4g0053951 25.095 263 141 11 166 423 194 405 4.58e-14 73.6
MsaG044959 MtrunA17_Chr1g0173921 21.667 300 194 8 97 390 3 267 6.32e-14 73.9
MsaG044959 MtrunA17_Chr2g0286421 23.512 336 196 9 103 428 107 391 6.66e-14 73.6
MsaG044959 MtrunA17_Chr4g0025671 23.529 255 161 8 92 340 2 228 7.98e-14 73.9
MsaG044959 MtrunA17_Chr0c02g0489761 25.328 229 141 6 92 316 72 274 9.08e-14 73.2
MsaG044959 MtrunA17_Chr7g0272841 23.828 256 164 7 97 343 67 300 1.31e-13 72.8
MsaG044959 MtrunA17_Chr7g0267771 22.699 326 179 10 98 420 88 343 1.69e-13 72.0
MsaG044959 MtrunA17_Chr4g0001331 26.400 250 145 10 81 321 2 221 2.15e-13 71.6
MsaG044959 MtrunA17_Chr4g0030241 32.593 135 63 3 206 337 10 119 2.82e-13 68.2
MsaG044959 MtrunA17_Chr1g0173541 28.390 236 129 10 90 316 44 248 2.89e-13 71.6
MsaG044959 MtrunA17_Chr3g0129721 28.571 245 140 7 91 329 18 233 3.51e-13 69.7
MsaG044959 MtrunA17_Chr2g0317001 27.234 235 128 8 92 317 9 209 4.65e-13 71.2
MsaG044959 MtrunA17_Chr7g0274941 24.556 338 170 12 97 425 15 276 5.16e-13 69.3
MsaG044959 MtrunA17_Chr4g0033371 24.706 340 181 11 93 428 67 335 6.32e-13 70.5
MsaG044959 MtrunA17_Chr2g0321841 21.239 339 182 10 97 428 3 263 6.69e-13 70.9
MsaG044959 MtrunA17_Chr3g0131861 24.251 334 188 10 102 423 101 381 6.82e-13 70.5
MsaG044959 MtrunA17_Chr4g0053821 24.621 264 141 11 166 423 163 374 1.28e-12 68.9
MsaG044959 MtrunA17_Chr5g0396361 23.565 331 192 10 103 423 145 424 1.37e-12 69.7
MsaG044959 MtrunA17_Chr5g0444171 26.638 229 138 6 92 316 86 288 1.43e-12 69.3
MsaG044959 MtrunA17_Chr8g0386981 27.778 252 141 9 89 329 396 617 1.45e-12 69.7
MsaG044959 MtrunA17_Chr2g0317501 23.708 329 194 10 103 423 139 418 1.58e-12 69.7
MsaG044959 MtrunA17_Chr4g0066691 23.193 332 202 9 103 428 109 393 1.72e-12 69.3
MsaG044959 MtrunA17_Chr7g0267751 22.659 331 173 9 98 420 135 390 2.00e-12 68.9
MsaG044959 MtrunA17_Chr1g0190831 23.413 252 155 8 97 340 3 224 2.10e-12 68.9
MsaG044959 MtrunA17_Chr3g0102601 25.806 248 119 8 183 423 15 204 2.12e-12 67.0
MsaG044959 MtrunA17_Chr8g0346071 27.273 231 123 8 97 316 16 212 2.80e-12 68.2
MsaG044959 MtrunA17_Chr1g0150321 28.571 252 137 10 94 336 9 226 4.26e-12 67.4
MsaG044959 MtrunA17_Chr3g0114511 25.000 236 131 7 91 315 25 225 4.33e-12 67.8
MsaG044959 MtrunA17_Chr7g0260191 24.111 253 152 9 97 340 3 224 9.08e-12 67.0
MsaG044959 MtrunA17_Chr8g0383451 24.583 240 148 7 104 337 4 216 1.21e-11 66.2
MsaG044959 MtrunA17_Chr1g0191221 24.159 327 195 10 103 423 127 406 1.30e-11 66.6
MsaG044959 MtrunA17_Chr4g0074811 25.877 228 141 5 92 316 85 287 1.39e-11 66.2
MsaG044959 MtrunA17_Chr4g0074111 27.917 240 127 9 94 321 14 219 1.47e-11 65.9
MsaG044959 MtrunA17_Chr5g0441011 30.088 226 123 9 98 316 13 210 1.68e-11 65.9
MsaG044959 MtrunA17_Chr5g0424501 29.675 246 129 12 104 340 198 408 1.98e-11 65.5
MsaG044959 MtrunA17_Chr4g0059751 26.639 244 136 9 98 329 89 301 2.44e-11 65.1
MsaG044959 MtrunA17_Chr6g0453681 28.151 238 134 8 98 329 19 225 2.56e-11 65.5
MsaG044959 MtrunA17_Chr6g0468751 28.151 238 134 8 98 329 19 225 2.86e-11 65.5
MsaG044959 MtrunA17_Chr6g0449691 22.443 352 191 12 79 425 68 342 2.92e-11 65.1
MsaG044959 MtrunA17_Chr7g0244521 26.446 242 146 6 91 327 5 219 2.99e-11 65.1
MsaG044959 MtrunA17_Chr4g0059951 25.541 231 134 8 94 316 69 269 3.00e-11 65.5
MsaG044959 MtrunA17_Chr5g0424581 29.268 246 130 12 104 340 131 341 3.34e-11 64.7
MsaG044959 MtrunA17_Chr2g0318171 25.316 237 136 8 103 329 486 691 3.37e-11 65.5
MsaG044959 MtrunA17_Chr8g0374571 24.702 336 176 10 95 426 20 282 3.53e-11 64.3
MsaG044959 MtrunA17_Chr8g0346081 26.840 231 124 8 97 316 16 212 3.87e-11 64.7
MsaG044959 MtrunA17_Chr1g0197721 22.822 241 157 9 89 321 41 260 4.01e-11 64.7
MsaG044959 MtrunA17_Chr4g0030361 26.875 160 112 3 166 321 376 534 4.48e-11 64.7
MsaG044959 MtrunA17_Chr4g0040141 23.939 330 194 10 103 424 134 414 5.26e-11 64.7
MsaG044959 MtrunA17_Chr1g0170281 24.561 228 142 6 93 316 113 314 7.74e-11 63.9
MsaG044959 MtrunA17_Chr1g0167351 24.180 244 157 6 104 324 116 354 9.25e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG044959 AT4G24740.1 84.309 427 65 2 1 426 1 426 0.0 758
MsaG044959 AT4G24740.7 84.319 389 60 1 38 426 1 388 0.0 697
MsaG044959 AT3G53570.1 69.725 436 114 4 1 425 17 445 0.0 630
MsaG044959 AT3G53570.4 69.725 436 114 4 1 425 17 445 0.0 630
MsaG044959 AT3G53570.2 69.725 436 114 4 1 425 17 445 0.0 630
MsaG044959 AT3G53570.3 69.725 436 114 4 1 425 3 431 0.0 629
MsaG044959 AT3G53570.5 69.725 436 114 4 1 425 3 431 0.0 629
MsaG044959 AT4G24740.3 84.527 349 52 2 1 348 1 348 0.0 621
MsaG044959 AT4G24740.6 86.997 323 42 0 104 426 1 323 0.0 598
MsaG044959 AT4G24740.9 86.997 323 42 0 104 426 1 323 0.0 598
MsaG044959 AT4G24740.2 86.997 323 42 0 104 426 1 323 0.0 598
MsaG044959 AT4G24740.4 84.494 316 47 2 1 315 1 315 0.0 563
MsaG044959 AT4G32660.1 59.762 420 135 6 14 427 9 400 1.05e-177 502
MsaG044959 AT4G32660.3 59.666 419 137 5 14 427 1 392 1.12e-177 501
MsaG044959 AT4G24740.5 88.163 245 29 0 104 348 1 245 5.30e-164 461
MsaG044959 AT4G32660.2 60.695 374 115 5 14 382 9 355 3.92e-160 456
MsaG044959 AT4G32660.4 64.360 289 101 2 140 427 1 288 9.32e-136 391
MsaG044959 AT4G24740.10 83.099 213 36 0 214 426 8 220 1.93e-131 377
MsaG044959 AT4G24740.8 83.099 213 36 0 214 426 8 220 1.93e-131 377
MsaG044959 AT1G13350.3 31.941 407 213 15 47 423 459 831 1.32e-45 169
MsaG044959 AT1G13350.1 32.880 368 190 13 80 423 424 758 2.41e-44 165
MsaG044959 AT1G13350.2 32.880 368 190 13 80 423 451 785 2.60e-44 165
MsaG044959 AT5G35980.2 29.315 365 197 6 97 422 121 463 2.09e-43 162
MsaG044959 AT3G53640.1 32.410 361 201 11 80 423 305 639 2.87e-43 160
MsaG044959 AT5G35980.3 29.041 365 198 7 97 422 86 428 4.31e-43 162
MsaG044959 AT5G35980.1 29.041 365 198 7 97 422 121 463 5.06e-43 162
MsaG044959 AT3G25840.2 30.328 366 201 10 80 423 337 670 2.43e-42 158
MsaG044959 AT2G40120.1 30.952 336 199 5 97 427 260 567 3.05e-42 157
MsaG044959 AT3G25840.1 30.328 366 201 10 80 423 599 932 1.40e-41 157
MsaG044959 AT1G73460.2 30.435 345 207 7 81 420 841 1157 4.95e-41 156
MsaG044959 AT1G73460.1 30.435 345 207 7 81 420 841 1157 4.95e-41 156
MsaG044959 AT1G73450.1 30.792 341 203 7 85 420 828 1140 5.20e-41 156
MsaG044959 AT3G17750.1 31.014 345 205 7 81 420 810 1126 6.93e-41 155
MsaG044959 AT4G35500.1 29.902 408 202 14 82 420 21 413 2.45e-40 149
MsaG044959 AT2G17530.1 30.048 416 206 15 82 428 21 420 8.47e-39 145
MsaG044959 AT2G17530.3 30.048 416 206 15 82 428 21 420 8.47e-39 145
MsaG044959 AT2G17530.2 31.875 320 156 9 82 340 21 339 2.90e-36 136
MsaG044959 AT4G35500.2 28.851 409 206 15 82 420 21 414 6.62e-36 137
MsaG044959 AT3G53030.1 38.217 157 90 4 84 233 27 183 4.76e-27 113
MsaG044959 AT3G53030.1 30.233 172 91 5 263 420 307 463 1.11e-15 79.3
MsaG044959 AT3G44850.1 37.654 162 94 4 79 233 25 186 1.32e-26 112
MsaG044959 AT3G44850.1 30.286 175 93 6 263 423 322 481 1.52e-16 82.0
MsaG044959 AT5G22840.1 38.217 157 90 4 84 233 30 186 4.98e-25 107
MsaG044959 AT5G22840.1 30.899 178 88 7 263 423 311 470 1.78e-15 79.0
MsaG044959 AT1G76540.1 26.205 332 188 10 103 423 19 304 7.06e-25 104
MsaG044959 AT4G13020.7 28.487 337 175 10 97 423 3 283 1.09e-24 105
MsaG044959 AT4G13020.6 28.487 337 175 10 97 423 3 283 1.13e-24 105
MsaG044959 AT4G13020.4 28.487 337 175 10 97 423 3 283 1.34e-24 105
MsaG044959 AT4G13020.1 28.487 337 175 10 97 423 3 283 1.35e-24 105
MsaG044959 AT5G19010.1 28.779 344 179 14 96 423 23 316 1.45e-24 106
MsaG044959 AT4G13020.2 28.487 337 175 10 97 423 11 291 2.06e-24 105
MsaG044959 AT4G13020.3 28.487 337 175 10 97 423 11 291 2.08e-24 105
MsaG044959 AT3G59790.1 27.139 339 190 11 94 423 55 345 4.59e-24 103
MsaG044959 AT3G18040.5 30.383 339 182 11 95 423 15 309 1.29e-23 103
MsaG044959 AT3G18040.1 30.383 339 182 11 95 423 20 314 1.38e-23 103
MsaG044959 AT3G48750.1 27.381 336 184 11 97 423 3 287 1.45e-23 100
MsaG044959 AT3G18040.4 30.435 345 174 14 95 423 129 423 2.18e-23 103
MsaG044959 AT4G13020.5 28.280 343 177 10 97 423 3 292 2.64e-23 102
MsaG044959 AT3G18040.3 30.383 339 182 11 95 423 129 423 2.92e-23 102
MsaG044959 AT4G13020.8 28.280 343 177 10 97 423 3 292 3.05e-23 100
MsaG044959 AT1G18040.1 25.294 340 193 12 92 423 6 292 3.09e-23 101
MsaG044959 AT4G01370.1 27.469 324 188 10 104 423 49 329 1.00e-22 99.4
MsaG044959 AT4G11330.1 27.711 332 177 13 104 423 49 329 1.41e-22 99.0
MsaG044959 AT1G01560.2 27.469 324 188 10 104 423 46 326 1.50e-22 99.0
MsaG044959 AT1G73670.1 27.005 374 205 15 66 423 60 381 3.12e-22 99.8
MsaG044959 AT2G01450.3 27.729 339 191 10 95 423 13 307 3.38e-22 99.0
MsaG044959 AT2G01450.1 27.729 339 191 10 95 423 13 307 3.38e-22 99.0
MsaG044959 AT2G01450.2 27.729 339 191 10 95 423 13 307 3.38e-22 99.0
MsaG044959 AT2G01450.4 27.729 339 191 10 95 423 13 307 3.38e-22 99.0
MsaG044959 AT2G46070.1 25.926 324 193 9 104 423 47 327 9.58e-22 96.7
MsaG044959 AT1G73690.1 24.852 338 197 12 92 423 5 291 1.02e-21 96.7
MsaG044959 AT3G45640.1 26.239 343 193 13 94 425 33 326 1.08e-21 96.3
MsaG044959 AT2G43790.1 26.331 338 194 12 94 423 58 348 1.19e-21 96.7
MsaG044959 AT2G46070.3 25.926 324 193 9 104 423 81 361 1.23e-21 96.7
MsaG044959 AT2G38620.2 28.329 353 175 12 97 423 3 303 1.41e-21 95.1
MsaG044959 AT4G36450.1 24.716 352 205 12 82 422 13 315 3.54e-21 94.7
MsaG044959 AT1G20930.1 25.904 332 189 9 103 423 21 306 4.59e-21 93.6
MsaG044959 AT1G59580.2 25.967 362 206 11 75 423 7 319 5.87e-21 94.4
MsaG044959 AT1G59580.1 25.967 362 206 11 75 423 7 319 5.87e-21 94.4
MsaG044959 AT1G10210.2 26.836 354 200 12 82 423 13 319 6.36e-21 94.4
MsaG044959 AT1G10210.3 26.836 354 200 12 82 423 13 319 6.36e-21 94.4
MsaG044959 AT1G10210.1 26.836 354 200 12 82 423 13 319 6.36e-21 94.4
MsaG044959 AT1G01560.3 27.215 316 183 10 104 415 46 318 1.35e-20 92.8
MsaG044959 AT1G18150.3 26.190 378 212 14 62 423 69 395 1.52e-20 94.7
MsaG044959 AT1G18150.2 26.190 378 212 14 62 423 69 395 1.52e-20 94.7
MsaG044959 AT1G18150.1 26.190 378 212 14 62 423 69 395 1.52e-20 94.7
MsaG044959 AT2G42880.2 26.844 339 194 11 95 423 22 316 3.02e-20 93.2
MsaG044959 AT2G42880.1 27.139 339 193 10 95 423 22 316 3.24e-20 93.6
MsaG044959 AT3G14720.1 27.273 341 190 10 95 423 22 316 4.60e-20 93.2
MsaG044959 AT1G06390.2 25.872 344 184 10 95 423 67 354 6.59e-20 91.7
MsaG044959 AT1G06390.1 25.872 344 184 10 95 423 67 354 6.59e-20 91.7
MsaG044959 AT4G18710.1 25.352 355 172 10 95 423 37 324 8.52e-20 90.9
MsaG044959 AT5G14640.1 25.926 351 175 13 95 423 71 358 8.85e-20 91.3
MsaG044959 AT5G14640.2 25.926 351 175 13 95 423 71 358 8.85e-20 91.3
MsaG044959 AT3G14720.2 27.273 341 190 9 95 423 22 316 1.40e-19 90.9
MsaG044959 AT3G14720.3 27.273 341 190 9 95 423 22 316 1.40e-19 90.9
MsaG044959 AT3G13530.1 27.586 232 137 4 88 315 10 214 1.54e-19 92.0
MsaG044959 AT1G67580.1 27.246 345 171 12 102 423 410 697 1.80e-19 91.7
MsaG044959 AT1G67580.2 27.246 345 171 12 102 423 410 697 1.80e-19 91.7
MsaG044959 AT1G57870.1 25.948 343 185 10 95 423 79 366 1.83e-19 90.5
MsaG044959 AT1G57870.4 25.948 343 185 10 95 423 79 366 1.83e-19 90.5
MsaG044959 AT1G57870.2 25.948 343 185 10 95 423 79 366 1.83e-19 90.5
MsaG044959 AT2G18170.1 23.964 338 203 8 94 423 28 319 1.84e-19 89.7
MsaG044959 AT3G07980.1 28.448 232 135 5 88 315 10 214 1.86e-19 92.0
MsaG044959 AT3G07980.2 28.448 232 135 5 88 315 10 214 2.01e-19 91.7
MsaG044959 AT5G63610.1 26.685 356 186 16 97 423 24 333 2.07e-19 90.5
MsaG044959 AT1G53510.1 26.627 338 194 9 96 423 23 316 2.29e-19 90.9
MsaG044959 AT1G57870.3 25.948 343 185 10 95 423 79 366 2.58e-19 90.1
MsaG044959 AT5G63370.7 25.978 358 200 11 84 423 283 593 2.83e-19 90.9
MsaG044959 AT5G63370.8 25.978 358 200 11 84 423 283 593 2.83e-19 90.9
MsaG044959 AT5G63370.4 25.978 358 200 11 84 423 283 593 2.83e-19 90.9
MsaG044959 AT5G63370.6 25.978 358 200 11 84 423 283 593 2.83e-19 90.9
MsaG044959 AT5G63370.1 25.978 358 200 11 84 423 283 593 2.83e-19 90.9
MsaG044959 AT2G30980.1 25.788 349 178 12 95 423 69 356 3.19e-19 89.7
MsaG044959 AT5G63370.2 25.824 364 205 11 78 423 143 459 3.43e-19 90.1
MsaG044959 AT5G63370.3 25.824 364 205 11 78 423 143 459 3.43e-19 90.1
MsaG044959 AT1G09840.3 25.656 343 186 10 95 423 80 367 4.73e-19 89.4
MsaG044959 AT1G09840.7 25.656 343 186 10 95 423 80 367 4.73e-19 89.4
MsaG044959 AT1G09840.10 25.656 343 186 10 95 423 80 367 4.73e-19 89.4
MsaG044959 AT1G09840.6 25.656 343 186 10 95 423 80 367 4.73e-19 89.4
MsaG044959 AT1G09840.4 25.656 343 186 10 95 423 80 367 4.73e-19 89.4
MsaG044959 AT1G09840.1 25.656 343 186 10 95 423 80 367 4.73e-19 89.4
MsaG044959 AT1G09840.9 25.656 343 186 10 95 423 80 367 4.73e-19 89.4
MsaG044959 AT1G09840.5 25.656 343 186 10 95 423 80 367 4.73e-19 89.4
MsaG044959 AT1G09840.8 25.656 343 186 10 95 423 80 367 4.73e-19 89.4
MsaG044959 AT1G09840.2 25.656 343 186 10 95 423 80 367 4.73e-19 89.4
MsaG044959 AT2G46070.2 25.392 319 191 9 104 418 47 322 1.21e-18 87.0
MsaG044959 AT1G12580.1 26.453 344 170 12 93 428 39 307 1.45e-18 88.2
MsaG044959 AT1G66750.1 23.669 338 191 11 97 423 12 293 8.20e-18 84.7
MsaG044959 AT4G04710.2 27.917 240 137 8 92 322 30 242 1.15e-17 85.5
MsaG044959 AT5G57630.2 30.544 239 129 8 91 323 5 212 1.16e-17 84.7
MsaG044959 AT1G07880.2 25.000 332 186 12 104 423 39 319 1.20e-17 84.3
MsaG044959 AT5G57630.1 30.544 239 129 8 91 323 5 212 1.40e-17 84.7
MsaG044959 AT4G04710.4 27.917 240 137 8 92 322 30 242 1.61e-17 85.1
MsaG044959 AT4G04710.1 27.917 240 137 8 92 322 30 242 1.66e-17 85.1
MsaG044959 AT4G00720.1 24.501 351 180 13 95 423 135 422 1.74e-17 84.7
MsaG044959 AT3G49370.1 28.512 242 139 7 87 320 131 346 1.83e-17 85.1
MsaG044959 AT5G64960.1 26.113 337 191 11 103 423 31 325 2.01e-17 84.7
MsaG044959 AT3G61160.4 24.490 343 190 13 95 423 99 386 2.17e-17 84.3
MsaG044959 AT3G61160.2 24.490 343 190 13 95 423 106 393 2.35e-17 84.3
MsaG044959 AT3G61160.1 24.490 343 190 13 95 423 99 386 2.47e-17 84.0
MsaG044959 AT2G38910.1 27.948 229 135 6 92 316 128 330 2.50e-17 84.7
MsaG044959 AT3G05840.2 23.547 344 192 10 95 423 70 357 2.90e-17 83.6
MsaG044959 AT3G05840.1 23.547 344 192 10 95 423 70 357 2.90e-17 83.6
MsaG044959 AT1G76040.3 25.740 338 164 11 93 420 107 367 3.09e-17 84.3
MsaG044959 AT4G18710.2 27.341 267 125 8 95 337 31 252 3.48e-17 81.6
MsaG044959 AT1G76040.2 25.740 338 164 11 93 420 107 367 4.13e-17 84.0
MsaG044959 AT5G26751.1 23.547 344 192 10 95 423 66 353 4.60e-17 83.2
MsaG044959 AT3G18040.2 31.274 259 127 10 172 423 12 226 4.85e-17 83.2
MsaG044959 AT2G38620.3 28.352 261 140 9 97 336 3 237 1.15e-16 80.1
MsaG044959 AT2G38620.1 28.352 261 140 9 97 336 3 237 1.15e-16 80.1
MsaG044959 AT3G17850.1 28.112 249 146 8 98 328 882 1115 1.16e-16 83.2
MsaG044959 AT1G01560.4 28.814 236 139 6 104 335 46 256 1.62e-16 79.7
MsaG044959 AT1G01560.1 28.814 236 139 6 104 335 46 256 1.62e-16 79.7
MsaG044959 AT1G08650.2 23.273 275 177 5 89 357 6 252 2.52e-16 79.3
MsaG044959 AT1G08650.1 23.273 275 177 5 89 357 6 252 2.94e-16 79.3
MsaG044959 AT5G10270.1 25.519 337 193 11 103 423 31 325 4.42e-16 80.5
MsaG044959 AT5G63370.5 26.336 262 160 6 84 337 283 519 4.87e-16 80.5
MsaG044959 AT5G63370.10 26.336 262 160 6 84 337 283 519 4.87e-16 80.5
MsaG044959 AT5G63370.9 26.119 268 165 6 78 337 143 385 5.87e-16 79.7
MsaG044959 AT4G19110.3 27.778 252 135 9 174 423 21 227 6.70e-16 79.7
MsaG044959 AT1G50240.3 25.641 234 132 6 98 323 6 205 9.46e-16 80.5
MsaG044959 AT1G50240.2 25.641 234 132 6 98 323 6 205 9.46e-16 80.5
MsaG044959 AT3G04530.1 24.198 343 169 13 94 424 7 270 9.56e-16 77.8
MsaG044959 AT3G15220.1 27.007 274 150 10 92 356 9 241 1.17e-15 79.7
MsaG044959 AT2G38620.4 25.519 337 143 11 97 423 3 241 1.48e-15 76.6
MsaG044959 AT5G62310.1 25.738 237 147 6 98 316 754 979 2.41e-15 79.0
MsaG044959 AT1G53570.6 26.860 242 139 8 96 329 212 423 3.07e-15 78.2
MsaG044959 AT1G53570.7 26.860 242 139 8 96 329 212 423 3.08e-15 78.2
MsaG044959 AT1G53570.1 26.639 244 137 8 96 329 212 423 3.76e-15 78.2
MsaG044959 AT1G69220.1 24.561 228 141 4 92 316 243 442 3.80e-15 78.2
MsaG044959 AT1G53570.4 26.639 244 137 8 96 329 212 423 3.83e-15 78.2
MsaG044959 AT1G53570.2 26.639 244 137 8 96 329 212 423 3.83e-15 78.2
MsaG044959 AT1G53570.3 26.639 244 137 8 96 329 212 423 3.83e-15 78.2
MsaG044959 AT4G04700.1 26.582 237 138 7 93 320 23 232 1.13e-14 76.3
MsaG044959 AT3G61160.5 24.903 257 144 10 95 337 99 320 1.41e-14 75.5
MsaG044959 AT3G61160.3 24.903 257 144 10 95 337 99 320 1.55e-14 75.1
MsaG044959 AT3G61160.6 24.903 257 144 10 95 337 106 327 1.71e-14 75.1
MsaG044959 AT3G08730.1 24.891 229 135 6 98 320 134 331 1.79e-14 75.5
MsaG044959 AT3G08730.2 24.891 229 135 6 98 320 134 331 1.79e-14 75.5
MsaG044959 AT4G10010.2 24.000 325 198 9 103 423 161 440 2.68e-14 75.5
MsaG044959 AT1G09000.2 28.000 225 125 7 104 318 75 272 3.42e-14 75.1
MsaG044959 AT1G53165.1 27.234 235 128 8 92 317 9 209 3.45e-14 75.1
MsaG044959 AT1G09000.1 28.000 225 125 7 104 318 75 272 3.50e-14 75.1
MsaG044959 AT1G53165.3 27.234 235 128 8 92 317 9 209 4.23e-14 74.7
MsaG044959 AT5G67380.2 24.850 334 167 16 114 425 93 364 4.34e-14 73.9
MsaG044959 AT1G53165.2 27.234 235 128 8 92 317 9 209 4.73e-14 74.7
MsaG044959 AT3G44200.2 23.922 255 160 8 92 340 2 228 7.14e-14 74.3
MsaG044959 AT3G44200.1 23.922 255 160 8 92 340 2 228 7.14e-14 74.3
MsaG044959 AT5G67380.1 25.660 265 141 12 166 425 184 397 9.60e-14 73.2
MsaG044959 AT1G54960.1 28.017 232 130 8 97 318 67 271 1.02e-13 73.6
MsaG044959 AT1G54960.2 28.017 232 130 8 97 318 67 271 1.02e-13 73.6
MsaG044959 AT3G08720.1 24.454 229 136 6 98 320 140 337 1.13e-13 73.2
MsaG044959 AT3G08720.3 24.454 229 136 6 98 320 140 337 1.13e-13 73.2
MsaG044959 AT3G08720.4 24.454 229 136 6 98 320 140 337 1.13e-13 73.2
MsaG044959 AT3G08720.2 24.454 229 136 6 98 320 140 337 1.13e-13 73.2
MsaG044959 AT4G21940.3 23.442 337 175 9 92 420 96 357 1.16e-13 73.2
MsaG044959 AT1G71530.2 22.961 331 194 9 103 423 152 431 1.33e-13 72.8
MsaG044959 AT5G50860.1 22.432 370 207 13 73 423 90 398 1.40e-13 73.2
MsaG044959 AT5G04510.3 24.535 269 169 11 62 321 10 253 1.53e-13 71.6
MsaG044959 AT4G21940.1 23.442 337 175 9 92 420 96 357 1.55e-13 72.8
MsaG044959 AT5G50860.2 22.432 370 207 13 73 423 90 398 1.65e-13 72.8
MsaG044959 AT1G71530.1 22.961 331 194 9 103 423 152 431 1.71e-13 72.8
MsaG044959 AT1G09840.11 25.726 241 113 8 196 423 53 240 1.72e-13 71.2
MsaG044959 AT4G21940.2 23.442 337 175 9 92 420 96 357 1.73e-13 72.8
MsaG044959 AT1G18670.3 23.590 390 231 12 44 426 92 421 1.95e-13 72.8
MsaG044959 AT1G18670.2 23.590 390 231 12 44 426 92 421 2.04e-13 72.8
MsaG044959 AT5G04510.2 23.970 267 173 10 62 321 10 253 2.15e-13 72.0
MsaG044959 AT2G31500.1 25.806 248 146 8 90 328 58 276 2.41e-13 72.4
MsaG044959 AT5G04510.1 24.164 269 170 11 62 321 10 253 2.43e-13 72.0
MsaG044959 AT1G18670.1 23.590 390 231 12 44 426 92 421 2.49e-13 72.4
MsaG044959 AT5G39420.1 23.193 332 202 10 103 428 110 394 2.86e-13 72.4
MsaG044959 AT1G53050.2 24.179 335 191 9 103 426 139 421 2.94e-13 72.4
MsaG044959 AT1G53050.1 24.179 335 191 9 103 426 139 421 2.94e-13 72.4
MsaG044959 AT1G48490.3 25.360 347 175 15 98 423 828 1111 4.18e-13 72.0
MsaG044959 AT1G48490.2 25.360 347 175 15 98 423 828 1111 4.18e-13 72.0
MsaG044959 AT1G48490.1 25.360 347 175 15 98 423 828 1111 4.18e-13 72.0
MsaG044959 AT1G48490.4 25.360 347 175 15 98 423 829 1112 4.29e-13 72.0
MsaG044959 AT2G34290.1 28.629 248 140 8 104 338 7 230 4.32e-13 69.7
MsaG044959 AT1G50700.3 25.794 252 154 7 72 316 44 269 4.48e-13 71.2
MsaG044959 AT2G23070.1 26.009 223 123 10 206 423 232 417 4.71e-13 70.9
MsaG044959 AT1G50700.1 26.562 256 147 9 72 316 44 269 5.09e-13 71.2
MsaG044959 AT1G50700.2 26.562 256 147 9 72 316 44 269 5.18e-13 71.2
MsaG044959 AT2G17290.1 24.551 334 173 11 93 420 80 340 5.59e-13 71.2
MsaG044959 AT2G17290.2 24.551 334 173 11 93 420 80 340 5.59e-13 71.2
MsaG044959 AT3G06030.1 25.974 231 134 7 97 317 67 270 5.64e-13 71.2
MsaG044959 AT1G49580.1 26.939 245 137 9 88 320 140 354 6.71e-13 70.9
MsaG044959 AT3G53930.1 23.494 332 174 8 98 423 20 277 8.77e-13 70.9
MsaG044959 AT5G19450.2 27.542 236 131 9 90 316 49 253 8.86e-13 70.5
MsaG044959 AT5G19450.1 27.542 236 131 9 90 316 49 253 8.86e-13 70.5
MsaG044959 AT1G45160.1 26.122 245 132 8 98 316 670 891 8.87e-13 70.9
MsaG044959 AT3G53930.2 23.494 332 174 8 98 423 20 277 9.10e-13 70.9
MsaG044959 AT1G45160.2 26.122 245 132 8 98 316 670 891 9.42e-13 70.9
MsaG044959 AT4G08500.1 25.649 308 168 11 43 340 294 550 1.01e-12 70.5
MsaG044959 AT5G64960.2 25.681 257 149 7 168 423 57 272 1.05e-12 70.1
MsaG044959 AT3G50000.1 25.283 265 142 12 166 425 178 391 1.07e-12 69.7
MsaG044959 AT2G23080.1 24.528 265 144 12 166 425 108 321 1.22e-12 68.9
MsaG044959 AT1G12680.1 24.324 407 213 16 22 424 41 356 1.46e-12 69.7
MsaG044959 AT1G74740.1 25.547 274 157 10 80 336 33 276 1.59e-12 69.7
MsaG044959 AT5G25110.1 28.807 243 130 9 94 326 39 248 2.59e-12 68.9
MsaG044959 AT1G69220.2 23.982 221 137 4 99 316 223 415 3.02e-12 69.3
MsaG044959 AT5G27790.1 30.723 166 93 4 180 338 106 256 3.36e-12 67.8
MsaG044959 AT5G28290.3 22.530 253 158 7 98 342 4 226 3.68e-12 68.6
MsaG044959 AT5G28290.1 22.530 253 158 7 98 342 4 226 3.83e-12 68.6
MsaG044959 AT5G28290.2 22.530 253 158 7 98 342 4 226 3.83e-12 68.6
MsaG044959 AT1G54610.1 24.159 327 195 10 103 423 123 402 4.10e-12 68.6
MsaG044959 AT1G54610.3 24.159 327 195 10 103 423 123 402 4.10e-12 68.6
MsaG044959 AT1G54610.2 24.159 327 195 10 103 423 123 402 4.10e-12 68.6
MsaG044959 AT3G63280.2 22.000 250 161 8 97 340 3 224 5.65e-12 68.2
MsaG044959 AT3G63280.3 22.000 250 161 8 97 340 3 224 5.65e-12 68.2
MsaG044959 AT3G63280.1 22.000 250 161 8 97 340 3 224 5.65e-12 68.2
MsaG044959 AT5G01810.3 25.735 272 157 9 91 347 5 246 5.90e-12 67.4
MsaG044959 AT1G71530.3 22.523 333 197 9 103 425 152 433 7.14e-12 67.4
MsaG044959 AT5G01810.1 25.735 272 157 9 91 347 5 246 8.05e-12 67.0
MsaG044959 AT5G01810.2 25.735 272 157 9 91 347 5 246 8.05e-12 67.0
MsaG044959 AT3G63280.4 22.000 250 161 8 97 340 57 278 8.38e-12 67.4
MsaG044959 AT3G20860.1 21.695 295 191 8 98 387 4 263 8.74e-12 67.0
MsaG044959 AT3G01085.1 21.687 332 208 9 98 423 115 400 9.86e-12 67.4
MsaG044959 AT3G01085.2 21.687 332 208 9 98 423 115 400 9.86e-12 67.4
MsaG044959 AT2G25090.1 26.638 229 143 8 94 316 11 220 1.05e-11 67.0
MsaG044959 AT3G01085.3 21.687 332 208 9 98 423 115 400 1.06e-11 67.4
MsaG044959 AT3G63340.9 26.070 257 144 8 200 423 127 370 1.17e-11 66.2
MsaG044959 AT3G20410.2 22.346 358 219 10 92 416 85 416 1.32e-11 67.0
MsaG044959 AT3G20410.1 22.346 358 219 10 92 416 85 416 1.32e-11 67.0
MsaG044959 AT2G26980.2 25.461 271 152 8 95 341 11 255 1.50e-11 65.1
MsaG044959 AT2G41920.1 27.778 252 144 10 105 338 13 244 1.57e-11 65.5
MsaG044959 AT2G34650.1 25.155 322 171 13 52 325 37 336 2.09e-11 65.9
MsaG044959 AT3G63340.7 26.070 257 144 8 200 423 793 1036 2.16e-11 66.6
MsaG044959 AT3G63340.5 26.070 257 144 8 200 423 792 1035 2.21e-11 66.6
MsaG044959 AT3G63340.1 26.070 257 144 8 200 423 792 1035 2.21e-11 66.6
MsaG044959 AT3G63340.2 26.070 257 144 8 200 423 826 1069 2.34e-11 66.6
MsaG044959 AT1G33770.1 25.926 243 143 7 103 337 146 359 2.50e-11 66.2
MsaG044959 AT2G20470.3 23.651 241 155 7 98 316 124 357 2.91e-11 65.9
MsaG044959 AT4G04695.1 25.092 271 163 8 98 357 28 269 2.93e-11 65.5
MsaG044959 AT2G26980.3 26.022 269 149 8 97 341 13 255 3.03e-11 65.5
MsaG044959 AT2G26980.1 25.830 271 151 8 95 341 11 255 3.09e-11 65.1
MsaG044959 AT2G20470.2 23.651 241 155 7 98 316 124 357 3.09e-11 65.9
MsaG044959 AT2G20470.1 23.651 241 155 7 98 316 124 357 3.09e-11 65.9
MsaG044959 AT2G26980.4 26.022 269 149 8 97 341 23 265 3.62e-11 65.1
MsaG044959 AT3G10540.1 23.431 239 158 8 89 321 35 254 3.87e-11 65.1
MsaG044959 AT3G01090.2 27.059 255 149 8 81 329 25 248 3.92e-11 65.5
MsaG044959 AT3G01090.3 27.059 255 149 8 81 329 2 225 4.20e-11 65.1
MsaG044959 AT3G01090.1 27.059 255 149 8 81 329 2 225 4.20e-11 65.1
MsaG044959 AT2G26980.5 25.830 271 151 8 95 341 11 255 4.57e-11 64.7
MsaG044959 AT2G41860.1 24.681 235 139 8 90 316 46 250 4.76e-11 65.1
MsaG044959 AT5G39440.1 25.969 258 152 6 93 343 14 239 4.77e-11 65.1
MsaG044959 AT1G54510.4 22.000 250 161 9 97 340 3 224 5.37e-11 65.1
MsaG044959 AT1G54510.2 22.000 250 161 9 97 340 3 224 5.37e-11 65.1
MsaG044959 AT1G54510.1 22.000 250 161 9 97 340 3 224 5.37e-11 65.1
MsaG044959 AT1G54510.3 22.000 250 161 9 97 340 3 224 5.37e-11 65.1
MsaG044959 AT4G38230.4 23.242 327 176 10 98 420 24 279 6.39e-11 64.7
MsaG044959 AT4G38230.3 23.242 327 176 10 98 420 24 279 6.39e-11 64.7
MsaG044959 AT4G38230.2 23.242 327 176 10 98 420 54 309 6.44e-11 64.7
MsaG044959 AT1G18890.1 25.000 252 150 9 94 336 59 280 6.52e-11 64.7
MsaG044959 AT2G41860.2 24.681 235 139 8 90 316 46 250 8.39e-11 64.3
MsaG044959 AT3G29160.3 27.376 263 145 11 92 343 14 241 9.56e-11 63.5

Find 106 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAAACTACCTTTGGGGTTTC+AGG 0.145290 8:-66947525 None:intergenic
GCTATCAAGGTTATTGATTT+TGG 0.163270 8:+66949998 MsaT044959.1:CDS
AAAATGGGAGAAGGAACTTT+TGG 0.291357 8:+66948918 MsaT044959.1:CDS
AGATAAGATACACAGCAAAA+TGG 0.304017 8:+66948902 MsaT044959.1:intron
ATTTCAAGCTATGCTCCTTC+AGG 0.312094 8:+66948381 MsaT044959.1:CDS
CCCAACCTCGCTCGCTTCCT+TGG 0.317671 8:-66947492 None:intergenic
GTATGTCAGAAGAGGTAAAT+TGG 0.325008 8:+66950550 MsaT044959.1:CDS
CTTGCAGTTGTGTGCAAATA+CGG 0.358647 8:+66949173 MsaT044959.1:intron
CACTAGTTCTCTATCTGTTA+AGG 0.362226 8:+66948422 MsaT044959.1:CDS
TTTCAGGCTTTAGGTCAGTA+TGG 0.373744 8:-66949646 None:intergenic
GGAGTCATCCATGTGATATA+TGG 0.382656 8:+66950218 MsaT044959.1:CDS
CAACATCTCAATTTCTATCA+TGG 0.397192 8:-66949027 None:intergenic
ACTTTCTTGAAATACGAGTT+TGG 0.399089 8:-66949962 None:intergenic
ATTGATCTTGTCCGTGAGAT+TGG 0.402071 8:+66949388 MsaT044959.1:CDS
TTGGGCAGGTATTGGAATGC+TGG 0.414675 8:+66948937 MsaT044959.1:CDS
AAACTACCTTTGGGGTTTCA+GGG 0.414780 8:-66947524 None:intergenic
GTTAAGGGTGTTGCTCGAAA+TGG 0.421905 8:+66948438 MsaT044959.1:CDS
TAACAGGTCTTTGAGAAACT+TGG 0.425003 8:+66949316 MsaT044959.1:intron
TCCCTCGAGGTTGCACCCAC+TGG 0.430466 8:-66950578 None:intergenic
TCTCTTAACAGATTTCATCT+AGG 0.432223 8:+66949936 MsaT044959.1:intron
GGAATGTCTGAGGGCTTCCT+TGG 0.434007 8:-66950829 None:intergenic
GATAAGATACACAGCAAAAT+GGG 0.438226 8:+66948903 MsaT044959.1:intron
CAGCTTGGTAAACATGATAT+AGG 0.439164 8:+66949053 MsaT044959.1:CDS
TTTAGAGCACCTTGCCATGA+TGG 0.439718 8:+66950379 MsaT044959.1:CDS
GCCATGATGGAGAGGGTACT+TGG 0.443817 8:+66950392 MsaT044959.1:CDS
CTTGGCTGTGATTCTTTCAG+AGG 0.445082 8:-66950811 None:intergenic
TCAGGAACTTTGACATAGTC+TGG 0.446838 8:-66949686 None:intergenic
TTGGCTGTGATTCTTTCAGA+GGG 0.450954 8:-66950810 None:intergenic
TATGTATTGTAGGTCTTGGC+TGG 0.452458 8:+66950197 MsaT044959.1:intron
TTTCAAGCTATGCTCCTTCA+GGG 0.453060 8:+66948382 MsaT044959.1:CDS
CCAAGGAAGCGAGCGAGGTT+GGG 0.453475 8:+66947492 MsaT044959.1:CDS
ACTAGTTCTCTATCTGTTAA+GGG 0.454556 8:+66948423 MsaT044959.1:CDS
CGAAGAAAATCGTATAAGCT+TGG 0.464676 8:-66949340 None:intergenic
CTCCAACAGCAAAAGTGTAA+TGG 0.467758 8:-66948494 None:intergenic
ATGGAGTGTGGGTTGTATAT+TGG 0.469593 8:+66950237 MsaT044959.1:CDS
GAAGCGAGCGAGGTTGGGTT+GGG 0.471855 8:+66947497 MsaT044959.1:CDS
ACCAAGGAAGCGAGCGAGGT+TGG 0.473712 8:+66947491 MsaT044959.1:CDS
GGAAGCGAGCGAGGTTGGGT+TGG 0.474492 8:+66947496 MsaT044959.1:CDS
ACTAAACAAACCTGTAGTCT+AGG 0.476049 8:-66950626 None:intergenic
AATCTCACGGACAAGATCAA+TGG 0.477143 8:-66949386 None:intergenic
TGCTCCTTCAGGGGTTCCCT+CGG 0.481039 8:+66948392 MsaT044959.1:CDS
CAGAAAAGTACCTTGTAGTC+AGG 0.482860 8:-66949704 None:intergenic
ATCTCACGGACAAGATCAAT+GGG 0.485452 8:-66949385 None:intergenic
TGGAATGCTGGGACAGAGAA+AGG 0.487189 8:+66948949 MsaT044959.1:CDS
TGGGCAGGTATTGGAATGCT+GGG 0.492677 8:+66948938 MsaT044959.1:CDS
CTGATCTACTCGCTCATAAG+TGG 0.495723 8:-66950026 None:intergenic
GCCCAAGTCTAGTGCTATCA+AGG 0.509824 8:+66949985 MsaT044959.1:CDS
ATTGAGATGTTGCAACAGCT+TGG 0.511407 8:+66949038 MsaT044959.1:CDS
TGAGATTGGCAGACAACTGT+TGG 0.514297 8:+66949402 MsaT044959.1:CDS
GGACAGAGAAAGGAAGGAAA+TGG 0.515918 8:+66948959 MsaT044959.1:CDS
AACCTTGATAGCACTAGACT+TGG 0.516162 8:-66949987 None:intergenic
AGAGCACCTGAAGTTATCCT+TGG 0.519240 8:+66950076 MsaT044959.1:CDS
CGAATTTCCCCACACTCACA+TGG 0.521211 8:+66947461 MsaT044959.1:CDS
AATGAAGCTCCCTAGACTAC+AGG 0.524672 8:+66950616 MsaT044959.1:CDS
AACATGATATAGGTGGCAAT+CGG 0.531768 8:+66949063 MsaT044959.1:CDS
GTTGTGTGCAAATACGGAAC+TGG 0.532397 8:+66949179 MsaT044959.1:intron
TTCAACATATGCATTGGTAG+TGG 0.535023 8:-66950416 None:intergenic
CACATACCAAGGATAACTTC+AGG 0.539252 8:-66950082 None:intergenic
TGTCAAAGTTCCTGACTACA+AGG 0.544213 8:+66949694 MsaT044959.1:CDS
TGGCGAGATGATGACAAAGA+TGG 0.544853 8:+66948471 MsaT044959.1:CDS
GAACTAGTGGTGTGTTCCGA+GGG 0.551251 8:-66948408 None:intergenic
ATCTCATACATCTGTTGCAA+GGG 0.564488 8:+66950772 MsaT044959.1:CDS
CTTTGTCATCATCTCGCCAA+GGG 0.564646 8:-66948467 None:intergenic
ACTCTCTTCAACATATGCAT+TGG 0.566407 8:-66950422 None:intergenic
ACCAAGTACCCTCTCCATCA+TGG 0.567162 8:-66950393 None:intergenic
GTCGACGATCCATGTGAGTG+TGG 0.567715 8:-66947470 None:intergenic
TCAGAAGAGGTAAATTGGAC+TGG 0.572141 8:+66950555 MsaT044959.1:CDS
CTAAACAAACCTGTAGTCTA+GGG 0.572555 8:-66950625 None:intergenic
GCCAGTGGGTGCAACCTCGA+GGG 0.576536 8:+66950577 MsaT044959.1:CDS
TGTTCCGAGGGAACCCCTGA+AGG 0.579395 8:-66948396 None:intergenic
GGTAAATTGGACTGGCCAGT+GGG 0.582269 8:+66950563 MsaT044959.1:CDS
ACCTCTTTGAATCATGGAGA+TGG 0.582876 8:+66947428 None:intergenic
CCCACACTCCATATATCACA+TGG 0.583844 8:-66950226 None:intergenic
TCTTTGTCATCATCTCGCCA+AGG 0.588015 8:-66948468 None:intergenic
AGGTAAATTGGACTGGCCAG+TGG 0.588465 8:+66950562 MsaT044959.1:CDS
ATGCTGGGACAGAGAAAGGA+AGG 0.588877 8:+66948953 MsaT044959.1:CDS
GGCCAGTGGGTGCAACCTCG+AGG 0.591274 8:+66950576 MsaT044959.1:CDS
GATCTCATACATCTGTTGCA+AGG 0.594750 8:+66950771 MsaT044959.1:CDS
GCTGAGAAGTATGTCAGAAG+AGG 0.595532 8:+66950542 MsaT044959.1:CDS
GTTGCCATTAAAATTGTCCG+TGG 0.596994 8:+66948981 MsaT044959.1:CDS
AGAACTAGTGGTGTGTTCCG+AGG 0.598747 8:-66948409 None:intergenic
AGCACCTTGCCATGATGGAG+AGG 0.598962 8:+66950384 MsaT044959.1:CDS
CAGCATGTTGATCATTCAGC+TGG 0.600221 8:+66950747 MsaT044959.1:CDS
CTCTGAAAGAATCACAGCCA+AGG 0.602183 8:+66950812 MsaT044959.1:CDS
CTTAACAGATAGAGAACTAG+TGG 0.610025 8:-66948421 None:intergenic
TCCATGTGATATATGGAGTG+TGG 0.611375 8:+66950225 MsaT044959.1:CDS
CCATGTGATATATGGAGTGT+GGG 0.611619 8:+66950226 MsaT044959.1:CDS
ACAGTTGTCTGCCAATCTCA+CGG 0.612503 8:-66949399 None:intergenic
GCACCTTGCCATGATGGAGA+GGG 0.613812 8:+66950385 MsaT044959.1:CDS
TTCAAGCTATGCTCCTTCAG+GGG 0.614491 8:+66948383 MsaT044959.1:CDS
TCGACGATCCATGTGAGTGT+GGG 0.618884 8:-66947469 None:intergenic
TATATTGGTCGAGTTATGCA+CGG 0.620171 8:+66950252 MsaT044959.1:CDS
ATACACAGCAAAATGGGAGA+AGG 0.623439 8:+66948909 MsaT044959.1:CDS
TGACATAGTCTGGTGAAACA+AGG 0.627450 8:-66949676 None:intergenic
GTCGACCAAGGAAGCGAGCG+AGG 0.630986 8:+66947487 MsaT044959.1:CDS
TGGCTGTGATTCTTTCAGAG+GGG 0.638139 8:-66950809 None:intergenic
CTTGGTAAACATGATATAGG+TGG 0.638336 8:+66949056 MsaT044959.1:CDS
ACCTTGATAGCACTAGACTT+GGG 0.639304 8:-66949986 None:intergenic
GTACCCTCTCCATCATGGCA+AGG 0.645010 8:-66950388 None:intergenic
TGACATACTTCTCAGCATGT+CGG 0.647381 8:-66950535 None:intergenic
CTCACATGGATCGTCGACCA+AGG 0.666555 8:+66947475 MsaT044959.1:CDS
AGCTTTAATACTCTCCCTCG+AGG 0.668957 8:-66950591 None:intergenic
GGATGTCCCTGAAACCCCAA+AGG 0.671414 8:+66947518 MsaT044959.1:CDS
CGACGATCCATGTGAGTGTG+GGG 0.685579 8:-66947468 None:intergenic
TTGTCATCATCTCGCCAAGG+GGG 0.707009 8:-66948465 None:intergenic
TTTGTCATCATCTCGCCAAG+GGG 0.725350 8:-66948466 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
Chromosome Type Strat End Strand Name
Chr8 gene 66947441 66950875 66947441 ID=MsaG044959
Chr8 mRNA 66947441 66950875 66947441 ID=MsaT044959.1;Parent=MsaG044959
Chr8 exon 66947441 66947539 66947441 ID=MsaT044959.1.exon1;Parent=MsaT044959.1
Chr8 CDS 66947441 66947539 66947441 ID=cds.MsaT044959.1;Parent=MsaT044959.1
Chr8 exon 66948342 66948534 66948342 ID=MsaT044959.1.exon2;Parent=MsaT044959.1
Chr8 CDS 66948342 66948534 66948342 ID=cds.MsaT044959.1;Parent=MsaT044959.1
Chr8 exon 66948904 66949084 66948904 ID=MsaT044959.1.exon3;Parent=MsaT044959.1
Chr8 CDS 66948904 66949084 66948904 ID=cds.MsaT044959.1;Parent=MsaT044959.1
Chr8 exon 66949180 66949228 66949180 ID=MsaT044959.1.exon4;Parent=MsaT044959.1
Chr8 CDS 66949180 66949228 66949180 ID=cds.MsaT044959.1;Parent=MsaT044959.1
Chr8 exon 66949322 66949436 66949322 ID=MsaT044959.1.exon5;Parent=MsaT044959.1
Chr8 CDS 66949322 66949436 66949322 ID=cds.MsaT044959.1;Parent=MsaT044959.1
Chr8 exon 66949624 66949715 66949624 ID=MsaT044959.1.exon6;Parent=MsaT044959.1
Chr8 CDS 66949624 66949715 66949624 ID=cds.MsaT044959.1;Parent=MsaT044959.1
Chr8 exon 66949947 66950097 66949947 ID=MsaT044959.1.exon7;Parent=MsaT044959.1
Chr8 CDS 66949947 66950097 66949947 ID=cds.MsaT044959.1;Parent=MsaT044959.1
Chr8 exon 66950209 66950273 66950209 ID=MsaT044959.1.exon8;Parent=MsaT044959.1
Chr8 CDS 66950209 66950273 66950209 ID=cds.MsaT044959.1;Parent=MsaT044959.1
Chr8 exon 66950350 66950447 66950350 ID=MsaT044959.1.exon9;Parent=MsaT044959.1
Chr8 CDS 66950350 66950447 66950350 ID=cds.MsaT044959.1;Parent=MsaT044959.1
Chr8 exon 66950535 66950637 66950535 ID=MsaT044959.1.exon10;Parent=MsaT044959.1
Chr8 CDS 66950535 66950637 66950535 ID=cds.MsaT044959.1;Parent=MsaT044959.1
Chr8 exon 66950735 66950875 66950735 ID=MsaT044959.1.exon11;Parent=MsaT044959.1
Chr8 CDS 66950735 66950875 66950735 ID=cds.MsaT044959.1;Parent=MsaT044959.1
Gene Sequence

>MsaT044959.1

ATGGAGATGGAACGCGTCTTCGAATTTCCCCACACTCACATGGATCGTCGACCAAGGAAGCGAGCGAGGTTGGGTTGGGATGTCCCTGAAACCCCAAAGGCTCAGGTAGAATTGTTTTTTGGACAAGAGCTTGGGAATATTTCAAGCTATGCTCCTTCAGGGGTTCCCTCGGAACACACCACTAGTTCTCTATCTGTTAAGGGTGTTGCTCGAAATGGTTCTCCCCCTTGGCGAGATGATGACAAAGATGGCCATTACACTTTTGCTGTTGGAGAAAATTTAACTTCCCGCTATAAGATACACAGCAAAATGGGAGAAGGAACTTTTGGGCAGGTATTGGAATGCTGGGACAGAGAAAGGAAGGAAATGGTTGCCATTAAAATTGTCCGTGGAATAAAAAAATATCGTGAAGCAGCCATGATAGAAATTGAGATGTTGCAACAGCTTGGTAAACATGATATAGGTGGCAATCGTTGTGTGCAAATACGGAACTGGTTTGACTATCGTAATCATATATGTATTGTCTTTGAGAAACTTGGACCAAGCTTATACGATTTTCTTCGGAAAAACAATTATCGCTCATTTCCCATTGATCTTGTCCGTGAGATTGGCAGACAACTGTTGGAATGTATAGCATTTATGCATGATTTGCGCATGATCCATACTGACCTAAAGCCTGAAAACATACTCCTTGTTTCACCAGACTATGTCAAAGTTCCTGACTACAAGATTTCATCTAGGTCACCAAACTCGTATTTCAAGAAAGTGCCCAAGTCTAGTGCTATCAAGGTTATTGATTTTGGAAGCACCACTTATGAGCGAGTAGATCAGAGCTACATTGTCTCAACTCGTCATTATAGAGCACCTGAAGTTATCCTTGGTCTTGGCTGGAGTCATCCATGTGATATATGGAGTGTGGGTTGTATATTGGTCGAGTTATGCACGGGCGAAGCTTTGTTTCAGACTCATGAAAATTTAGAGCACCTTGCCATGATGGAGAGGGTACTTGGTCCACTACCAATGCATATGTTGAAGAGAGTTGACCGACATGCTGAGAAGTATGTCAGAAGAGGTAAATTGGACTGGCCAGTGGGTGCAACCTCGAGGGAGAGTATTAAAGCTGTAATGAAGCTCCCTAGACTACAGAATCTAATAATGCAGCATGTTGATCATTCAGCTGGTGATCTCATACATCTGTTGCAAGGGTTACTTAGATATGACCCCTCTGAAAGAATCACAGCCAAGGAAGCCCTCAGACATTCCTTTTTTATGAGGAGATCACATTAG
Protein sequence

>MsaT044959.1

MEMERVFEFPHTHMDRRPRKRARLGWDVPETPKAQVELFFGQELGNISSYAPSGVPSEHTTSSLSVKGVARNGSPPWRDDDKDGHYTFAVGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEMLQQLGKHDIGGNRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNNYRSFPIDLVREIGRQLLECIAFMHDLRMIHTDLKPENILLVSPDYVKVPDYKISSRSPNSYFKKVPKSSAIKVIDFGSTTYERVDQSYIVSTRHYRAPEVILGLGWSHPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPMHMLKRVDRHAEKYVRRGKLDWPVGATSRESIKAVMKLPRLQNLIMQHVDHSAGDLIHLLQGLLRYDPSERITAKEALRHSFFMRRSH*