Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG045104 | XP_013457839.1 | 78.840 | 293 | 24 | 2 | 1 | 293 | 1 | 255 | 1.79e-162 | 462 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG045104 | tr|A0A072V1C0|A0A072V1C0_MEDTR | 78.840 | 293 | 24 | 2 | 1 | 293 | 1 | 255 | 8.56e-163 | 462 |
Gene ID | Type | Classification |
---|---|---|
MsaG045104 | TF | MADS-M-type |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsaG000135 | MsaG045104 | 0.830791 | 4.334009e-55 | 1.283000e-52 |
MsaG000242 | MsaG045104 | 0.800734 | 2.098685e-48 | 2.885013e-46 |
MsaG000385 | MsaG045104 | 0.821783 | 5.909910e-53 | 1.362624e-50 |
MsaG000408 | MsaG045104 | 0.824613 | 1.301061e-53 | 3.238280e-51 |
MsaG000638 | MsaG045104 | 0.809541 | 3.070648e-50 | 5.186110e-48 |
MsaG000613 | MsaG045104 | 0.821701 | 6.174006e-53 | 1.420458e-50 |
MsaG001133 | MsaG045104 | 0.837821 | 7.611609e-57 | 2.776268e-54 |
MsaG001713 | MsaG045104 | 0.805232 | 2.491886e-49 | 3.798321e-47 |
MsaG002481 | MsaG045104 | 0.818288 | 3.696765e-52 | 7.773315e-50 |
MsaG002885 | MsaG045104 | 0.822505 | 4.027659e-53 | 9.467891e-51 |
MsaG003422 | MsaG045104 | 0.803237 | 6.455801e-49 | 9.395778e-47 |
MsaG003470 | MsaG045104 | 0.825337 | 8.794696e-54 | 2.232893e-51 |
MsaG003831 | MsaG045104 | 0.812927 | 5.703041e-51 | 1.046575e-48 |
MsaG004029 | MsaG045104 | 0.824813 | 1.167685e-53 | 2.922293e-51 |
MsaG004070 | MsaG045104 | 0.830609 | 4.800151e-55 | 1.413520e-52 |
MsaG004096 | MsaG045104 | 0.868919 | 9.243987e-66 | 1.023930e-62 |
MsaG004656 | MsaG045104 | 0.826562 | 4.513702e-54 | 1.185626e-51 |
MsaG004718 | MsaG045104 | 0.832799 | 1.392939e-55 | 4.371283e-53 |
MsaG004773 | MsaG045104 | 0.822214 | 4.701529e-53 | 1.096595e-50 |
MsaG004856 | MsaG045104 | 0.813224 | 4.913699e-51 | 9.084377e-49 |
MsaG004887 | MsaG045104 | 0.842509 | 4.607070e-58 | 1.947507e-55 |
MsaG006117 | MsaG045104 | 0.812418 | 7.363232e-51 | 1.334191e-48 |
MsaG006240 | MsaG045104 | 0.829165 | 1.075041e-54 | 3.037662e-52 |
MsaG006582 | MsaG045104 | 0.823581 | 2.266088e-53 | 5.484478e-51 |
MsaG006657 | MsaG045104 | 0.845564 | 7.047686e-59 | 3.289945e-56 |
MsaG006765 | MsaG045104 | 0.854663 | 2.045968e-61 | 1.305965e-58 |
MsaG006987 | MsaG045104 | 0.806926 | 1.101313e-49 | 1.746839e-47 |
MsaG007036 | MsaG045104 | 0.843234 | 2.961548e-58 | 1.281244e-55 |
MsaG007091 | MsaG045104 | 0.823248 | 2.709464e-53 | 6.498421e-51 |
MsaG007213 | MsaG045104 | 0.801760 | 1.296941e-48 | 1.824737e-46 |
MsaG008003 | MsaG045104 | 0.802573 | 8.840366e-49 | 1.267139e-46 |
MsaG008511 | MsaG045104 | 0.844488 | 1.371426e-58 | 6.178962e-56 |
MsaG009117 | MsaG045104 | 0.802681 | 8.400177e-49 | 1.206999e-46 |
MsaG009121 | MsaG045104 | 0.810175 | 2.245803e-50 | 3.851539e-48 |
MsaG010122 | MsaG045104 | 0.815819 | 1.317965e-51 | 2.601165e-49 |
MsaG010177 | MsaG045104 | 0.820007 | 1.508004e-52 | 3.317318e-50 |
MsaG010598 | MsaG045104 | 0.841344 | 9.326682e-58 | 3.798311e-55 |
MsaG010637 | MsaG045104 | 0.812542 | 6.919850e-51 | 1.257766e-48 |
MsaG011484 | MsaG045104 | 0.859858 | 6.069807e-63 | 4.693726e-60 |
MsaG011634 | MsaG045104 | 0.816259 | 1.052467e-51 | 2.100535e-49 |
MsaG011917 | MsaG045104 | 0.822621 | 3.785381e-53 | 8.926530e-51 |
MsaG011972 | MsaG045104 | 0.803287 | 6.305664e-49 | 9.187664e-47 |
MsaG012046 | MsaG045104 | 0.823357 | 2.555514e-53 | 6.147527e-51 |
MsaG012294 | MsaG045104 | 0.826108 | 5.783596e-54 | 1.500182e-51 |
MsaG012562 | MsaG045104 | 0.819159 | 2.349898e-52 | 5.055062e-50 |
MsaG041919 | MsaG045104 | 0.807142 | 9.915819e-50 | 1.580868e-47 |
MsaG041985 | MsaG045104 | 0.812982 | 5.548003e-51 | 1.019515e-48 |
MsaG042395 | MsaG045104 | 0.813530 | 4.210510e-51 | 7.844280e-49 |
MsaG043695 | MsaG045104 | 0.821690 | 6.209568e-53 | 1.428220e-50 |
MsaG045009 | MsaG045104 | 0.808066 | 6.325480e-50 | 1.031023e-47 |
MsaG045104 | MsaG045331 | 0.821164 | 8.201948e-53 | 1.860411e-50 |
MsaG045104 | MsaG045365 | 0.810497 | 1.915639e-50 | 3.311250e-48 |
MsaG045104 | MsaG045428 | 0.802841 | 7.788501e-49 | 1.123182e-46 |
MsaG045104 | MsaG045535 | 0.801482 | 1.478427e-48 | 2.066934e-46 |
MsaG045104 | MsaG045510 | 0.828341 | 1.697804e-54 | 4.687637e-52 |
MsaG045104 | MsaG045717 | 0.848154 | 1.389174e-59 | 7.071514e-57 |
MsaG045104 | MsaG046022 | 0.810038 | 2.403683e-50 | 4.108545e-48 |
MsaG045104 | MsaG046078 | 0.812084 | 8.698608e-51 | 1.563130e-48 |
MsaG045104 | MsaG046167 | 0.825261 | 9.161427e-54 | 2.321147e-51 |
MsaG045104 | MsaG046261 | 0.814012 | 3.302060e-51 | 6.226466e-49 |
MsaG045104 | MsaG046540 | 0.807683 | 7.624446e-50 | 1.231342e-47 |
MsaG045104 | MsaG046497 | 0.801538 | 1.439797e-48 | 2.015515e-46 |
MsaG045104 | MsaG046503 | 0.810660 | 1.766767e-50 | 3.066029e-48 |
MsaG045104 | MsaG046660 | 0.835060 | 3.808204e-56 | 1.277936e-53 |
MsaG045104 | MsaG046745 | 0.857127 | 3.923334e-62 | 2.738722e-59 |
MsaG045104 | MsaG046780 | 0.812229 | 8.091021e-51 | 1.459179e-48 |
MsaG045104 | MsaG047077 | 0.821806 | 5.841234e-53 | 1.347575e-50 |
MsaG045104 | MsaG047139 | 0.818192 | 3.885527e-52 | 8.150269e-50 |
MsaG045104 | MsaG002078 | 0.816257 | 1.053515e-51 | 2.102501e-49 |
MsaG045104 | MsaG001072 | 0.807085 | 1.019536e-49 | 1.623219e-47 |
MsaG045104 | MsaG002617 | 0.800918 | 1.925962e-48 | 2.658461e-46 |
MsaG045104 | MsaG008746 | 0.803461 | 5.804222e-49 | 8.491175e-47 |
MsaG045104 | MsaG014278 | 0.826855 | 3.844431e-54 | 1.018139e-51 |
MsaG045104 | MsaG013546 | 0.802035 | 1.139559e-48 | 1.613349e-46 |
MsaG045104 | MsaG013859 | 0.816568 | 8.979483e-52 | 1.806355e-49 |
MsaG045104 | MsaG013041 | 0.813995 | 3.330005e-51 | 6.276602e-49 |
MsaG045104 | MsaG011821 | 0.847659 | 1.899118e-59 | 9.507827e-57 |
MsaG045104 | MsaG019816 | 0.823775 | 2.041866e-53 | 4.968052e-51 |
MsaG045104 | MsaG028782 | 0.814671 | 2.364738e-51 | 4.533413e-49 |
MsaG045104 | MsaG031186 | 0.805872 | 1.832229e-49 | 2.834831e-47 |
MsaG045104 | MsaG032757 | 0.812372 | 7.534019e-51 | 1.363597e-48 |
MsaG045104 | MsaG033077 | 0.805213 | 2.514971e-49 | 3.831771e-47 |
MsaG045104 | MsaG033348 | 0.802036 | 1.138866e-48 | 1.612421e-46 |
MsaG045104 | MsaG031508 | 0.803017 | 7.167555e-49 | 1.037859e-46 |
MsaG045104 | MsaG033778 | 0.800450 | 2.396429e-48 | 3.273263e-46 |
MsaG045104 | MsaG033449 | 0.846952 | 2.963003e-59 | 1.448616e-56 |
MsaG045104 | MsaG033259 | 0.810683 | 1.746792e-50 | 3.033045e-48 |
MsaG045104 | MsaG036736 | 0.845850 | 5.901380e-59 | 2.780949e-56 |
MsaG045104 | MsaG038591 | 0.839174 | 3.418476e-57 | 1.300379e-54 |
MsaG045104 | MsaG037725 | 0.833728 | 8.192436e-56 | 2.642194e-53 |
MsaG045104 | MsaG037447 | 0.821628 | 6.416087e-53 | 1.473296e-50 |
MsaG045104 | MsaG038625 | 0.807075 | 1.024155e-49 | 1.630227e-47 |
MsaG045104 | MsaG043116 | 0.802559 | 8.901245e-49 | 1.275440e-46 |
MsaG045104 | MsaG040992 | 0.821689 | 6.211982e-53 | 1.428739e-50 |
MsaG045104 | MsaG047025 | 0.801814 | 1.264851e-48 | 1.781775e-46 |
MsaG014290 | MsaG045104 | 0.802102 | 1.104225e-48 | 1.565684e-46 |
MsaG014515 | MsaG045104 | 0.808808 | 4.401516e-50 | 7.303549e-48 |
MsaG014815 | MsaG045104 | 0.805271 | 2.446600e-49 | 3.732507e-47 |
MsaG014848 | MsaG045104 | 0.836376 | 1.773957e-56 | 6.192997e-54 |
MsaG015445 | MsaG045104 | 0.839608 | 2.641595e-57 | 1.018554e-54 |
MsaG016273 | MsaG045104 | 0.800229 | 2.657049e-48 | 3.611040e-46 |
MsaG016695 | MsaG045104 | 0.803211 | 6.535486e-49 | 9.506034e-47 |
MsaG017136 | MsaG045104 | 0.808681 | 4.683174e-50 | 7.747499e-48 |
MsaG017310 | MsaG045104 | 0.802074 | 1.118749e-48 | 1.585317e-46 |
MsaG017183 | MsaG045104 | 0.812027 | 8.950610e-51 | 1.606220e-48 |
MsaG017290 | MsaG045104 | 0.800282 | 2.591482e-48 | 3.526206e-46 |
MsaG017396 | MsaG045104 | 0.834887 | 4.209031e-56 | 1.405115e-53 |
MsaG017503 | MsaG045104 | 0.830367 | 5.498830e-55 | 1.608181e-52 |
MsaG017483 | MsaG045104 | 0.807577 | 8.025367e-50 | 1.292801e-47 |
MsaG017529 | MsaG045104 | 0.811017 | 1.480236e-50 | 2.591318e-48 |
MsaG017839 | MsaG045104 | 0.825342 | 8.767351e-54 | 2.226338e-51 |
MsaG017907 | MsaG045104 | 0.811956 | 9.276896e-51 | 1.661889e-48 |
MsaG018054 | MsaG045104 | 0.805674 | 2.015794e-49 | 3.104339e-47 |
MsaG018295 | MsaG045104 | 0.825880 | 6.548228e-54 | 1.687816e-51 |
MsaG018598 | MsaG045104 | 0.846746 | 3.372078e-59 | 1.637345e-56 |
MsaG019183 | MsaG045104 | 0.833878 | 7.521243e-56 | 2.436161e-53 |
MsaG019188 | MsaG045104 | 0.817288 | 6.199283e-52 | 1.270474e-49 |
MsaG019494 | MsaG045104 | 0.800051 | 2.886437e-48 | 3.907220e-46 |
MsaG019559 | MsaG045104 | 0.807084 | 1.019946e-49 | 1.623849e-47 |
MsaG020327 | MsaG045104 | 0.806900 | 1.115037e-49 | 1.767554e-47 |
MsaG020834 | MsaG045104 | 0.841167 | 1.037862e-57 | 4.203281e-55 |
MsaG020992 | MsaG045104 | 0.829659 | 8.166556e-55 | 2.340544e-52 |
MsaG021395 | MsaG045104 | 0.815744 | 1.369195e-51 | 2.697091e-49 |
MsaG022325 | MsaG045104 | 0.843233 | 2.962682e-58 | 1.281715e-55 |
MsaG022627 | MsaG045104 | 0.806175 | 1.583410e-49 | 2.467459e-47 |
MsaG022652 | MsaG045104 | 0.825759 | 6.990373e-54 | 1.795687e-51 |
MsaG023003 | MsaG045104 | 0.842805 | 3.848095e-58 | 1.642029e-55 |
MsaG023268 | MsaG045104 | 0.816354 | 1.002401e-51 | 2.005468e-49 |
MsaG023641 | MsaG045104 | 0.838979 | 3.839043e-57 | 1.451595e-54 |
MsaG023796 | MsaG045104 | 0.810965 | 1.519310e-50 | 2.656315e-48 |
MsaG023893 | MsaG045104 | 0.800260 | 2.618306e-48 | 3.560913e-46 |
MsaG024570 | MsaG045104 | 0.801360 | 1.565235e-48 | 2.182294e-46 |
MsaG026480 | MsaG045104 | 0.800229 | 2.657364e-48 | 3.611423e-46 |
MsaG026829 | MsaG045104 | 0.828675 | 1.411189e-54 | 3.932772e-52 |
MsaG026961 | MsaG045104 | 0.813388 | 4.524259e-51 | 8.398733e-49 |
MsaG027006 | MsaG045104 | 0.828612 | 1.460868e-54 | 4.064243e-52 |
MsaG027557 | MsaG045104 | 0.832645 | 1.520253e-55 | 4.749307e-53 |
MsaG027590 | MsaG045104 | 0.805075 | 2.687543e-49 | 4.081568e-47 |
MsaG027715 | MsaG045104 | 0.833691 | 8.369144e-56 | 2.696284e-53 |
MsaG027845 | MsaG045104 | 0.835066 | 3.794869e-56 | 1.273670e-53 |
MsaG028628 | MsaG045104 | 0.812401 | 7.424226e-51 | 1.344726e-48 |
MsaG028649 | MsaG045104 | 0.804021 | 4.447530e-49 | 6.591538e-47 |
MsaG028661 | MsaG045104 | 0.849040 | 7.918560e-60 | 4.153482e-57 |
MsaG028802 | MsaG045104 | 0.808286 | 5.681667e-50 | 9.309978e-48 |
MsaG028844 | MsaG045104 | 0.837951 | 7.050070e-57 | 2.581879e-54 |
MsaG029035 | MsaG045104 | 0.816827 | 7.860996e-52 | 1.591927e-49 |
MsaG029053 | MsaG045104 | 0.834428 | 5.482335e-56 | 1.805329e-53 |
MsaG029063 | MsaG045104 | 0.828135 | 1.902726e-54 | 5.223083e-52 |
MsaG029464 | MsaG045104 | 0.811702 | 1.052612e-50 | 1.873958e-48 |
MsaG030038 | MsaG045104 | 0.846044 | 5.227409e-59 | 2.479440e-56 |
MsaG030590 | MsaG045104 | 0.830866 | 4.154770e-55 | 1.232623e-52 |
MsaG030841 | MsaG045104 | 0.815525 | 1.531577e-51 | 3.000206e-49 |
MsaG030979 | MsaG045104 | 0.813728 | 3.810807e-51 | 7.134871e-49 |
MsaG031007 | MsaG045104 | 0.812830 | 5.989311e-51 | 1.096429e-48 |
MsaG031781 | MsaG045104 | 0.800977 | 1.873084e-48 | 2.588934e-46 |
MsaG032279 | MsaG045104 | 0.831329 | 3.202207e-55 | 9.627712e-53 |
MsaG033231 | MsaG045104 | 0.849561 | 5.678267e-60 | 3.032138e-57 |
MsaG033818 | MsaG045104 | 0.819540 | 1.925518e-52 | 4.183542e-50 |
MsaG034234 | MsaG045104 | 0.832913 | 1.305017e-55 | 4.109277e-53 |
MsaG034336 | MsaG045104 | 0.808083 | 6.271761e-50 | 1.022697e-47 |
MsaG034590 | MsaG045104 | 0.844409 | 1.439823e-58 | 6.470404e-56 |
MsaG034853 | MsaG045104 | 0.800330 | 2.534215e-48 | 3.452042e-46 |
MsaG036455 | MsaG045104 | 0.820465 | 1.185839e-52 | 2.640409e-50 |
MsaG037748 | MsaG045104 | 0.803296 | 6.278878e-49 | 9.150470e-47 |
MsaG038749 | MsaG045104 | 0.834290 | 5.935327e-56 | 1.946398e-53 |
MsaG039573 | MsaG045104 | 0.802325 | 9.941344e-49 | 1.416868e-46 |
MsaG039781 | MsaG045104 | 0.821197 | 8.058894e-53 | 1.829535e-50 |
MsaG039901 | MsaG045104 | 0.801808 | 1.268339e-48 | 1.786455e-46 |
MsaG040027 | MsaG045104 | 0.811344 | 1.258076e-50 | 2.220168e-48 |
MsaG041072 | MsaG045104 | 0.844154 | 1.684982e-58 | 7.509358e-56 |
MsaG041299 | MsaG045104 | 0.831572 | 2.792161e-55 | 8.454936e-53 |
MsaG041670 | MsaG045104 | 0.803041 | 7.083680e-49 | 1.026294e-46 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG045104 | MtrunA17_Chr4g0059631 | 78.840 | 293 | 24 | 2 | 1 | 293 | 1 | 255 | 1.65e-166 | 462 |
MsaG045104 | MtrunA17_Chr4g0022641 | 48.094 | 341 | 113 | 6 | 1 | 293 | 1 | 325 | 9.97e-96 | 287 |
MsaG045104 | MtrunA17_Chr1g0212471 | 62.338 | 154 | 56 | 1 | 1 | 152 | 1 | 154 | 2.48e-62 | 195 |
MsaG045104 | MtrunA17_Chr2g0303981 | 50.000 | 162 | 78 | 3 | 3 | 162 | 5 | 165 | 2.59e-47 | 157 |
MsaG045104 | MtrunA17_Chr6g0457851 | 38.710 | 155 | 92 | 1 | 1 | 152 | 11 | 165 | 1.59e-35 | 130 |
MsaG045104 | MtrunA17_Chr1g0212151 | 41.935 | 155 | 87 | 1 | 1 | 152 | 1 | 155 | 3.57e-35 | 129 |
MsaG045104 | MtrunA17_Chr6g0449851 | 39.744 | 156 | 91 | 1 | 1 | 153 | 1 | 156 | 2.03e-34 | 127 |
MsaG045104 | MtrunA17_Chr6g0449861 | 37.419 | 155 | 94 | 1 | 1 | 152 | 9 | 163 | 1.21e-29 | 115 |
MsaG045104 | MtrunA17_Chr3g0107381 | 31.618 | 136 | 87 | 4 | 1 | 135 | 1 | 131 | 2.60e-14 | 70.9 |
MsaG045104 | MtrunA17_Chr2g0283941 | 25.806 | 155 | 104 | 3 | 2 | 148 | 3 | 154 | 1.62e-12 | 65.9 |
MsaG045104 | MtrunA17_Chr5g0432691 | 31.132 | 106 | 69 | 3 | 1 | 105 | 1 | 103 | 9.64e-11 | 59.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG045104 | AT5G55690.1 | 28.402 | 169 | 110 | 2 | 1 | 165 | 1 | 162 | 4.62e-16 | 77.0 |
MsaG045104 | AT5G55690.2 | 28.402 | 169 | 110 | 2 | 1 | 165 | 1 | 162 | 4.62e-16 | 77.0 |
Find 52 sgRNAs with CRISPR-Local
Find sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTTACACTTGTAAGGTCTTC+TGG | 0.270047 | 8:+68512976 | None:intergenic |
TCCTGAGATATTTGATGTTA+AGG | 0.348371 | 8:-68512911 | MsaT045104.1:CDS |
GCACTTTGGATGTATTTCAT+AGG | 0.357011 | 8:+68513138 | None:intergenic |
GTCAACCTGATCAGTTTGTT+TGG | 0.365476 | 8:-68512315 | MsaT045104.1:CDS |
AGCCCACTAAGTTGGTTTGA+TGG | 0.416723 | 8:+68512616 | None:intergenic |
ACCATCTCACTTGTATAATC+AGG | 0.418843 | 8:+68512565 | None:intergenic |
GATCAACAAGTTGACTAAGT+TGG | 0.422061 | 8:+68512386 | None:intergenic |
CTCCACAAGCCCACTAAGTT+GGG | 0.432529 | 8:+68512498 | None:intergenic |
ACAATCTCACTCATATAATC+AGG | 0.433010 | 8:+68512454 | None:intergenic |
GCAAGGAGTTTACACTTGTA+AGG | 0.440354 | 8:+68512968 | None:intergenic |
AGTTGGTTTGCTGATGAACT+TGG | 0.448642 | 8:+68512403 | None:intergenic |
AGTTGGTTTGATGGTGAACT+AGG | 0.459766 | 8:+68512625 | None:intergenic |
TCTCCACAAGCCCACTAAGT+TGG | 0.464358 | 8:+68512497 | None:intergenic |
TCTTTCCAAACAAACTGATC+AGG | 0.470431 | 8:+68512310 | None:intergenic |
CTAAAATGTGGATGCCAAGT+TGG | 0.479466 | 8:+68512811 | None:intergenic |
TAAAATGTGGATGCCAAGTT+GGG | 0.491000 | 8:+68512812 | None:intergenic |
GCTTGCTTTATTGTGTATGA+TGG | 0.491871 | 8:-68513030 | MsaT045104.1:CDS |
TCATCATCAACCCAACTTAG+TGG | 0.494369 | 8:-68512508 | MsaT045104.1:CDS |
TCCTTAACATCAAATATCTC+AGG | 0.501707 | 8:+68512910 | None:intergenic |
TCTCCACAAGCCCACTAAGT+TGG | 0.502348 | 8:+68512608 | None:intergenic |
CTTTGAAAATAAGACAGAAA+AGG | 0.506269 | 8:-68512884 | MsaT045104.1:CDS |
TTGTAAGAAGTCTGGAGCAA+AGG | 0.512867 | 8:-68513052 | MsaT045104.1:CDS |
AACTTGTTGATCTTGATGAC+TGG | 0.515181 | 8:-68512375 | MsaT045104.1:CDS |
TCACCATCAAACCAACTTAG+TGG | 0.519319 | 8:-68512619 | MsaT045104.1:CDS |
ATTGTGGATTTCACTAGTCT+TGG | 0.527589 | 8:-68512436 | MsaT045104.1:CDS |
CATCATCAACCCAACTTAGT+GGG | 0.531094 | 8:-68512507 | MsaT045104.1:CDS |
AACCCAACTTAGTGGGCTTG+TGG | 0.535603 | 8:-68512500 | MsaT045104.1:CDS |
TATAATCAGGATTAACAACT+TGG | 0.538229 | 8:+68512467 | None:intergenic |
AAACCAACTTAGTGGGCTTG+TGG | 0.552156 | 8:-68512611 | MsaT045104.1:CDS |
AGGTCTTCTGGCCATGTCGT+AGG | 0.557005 | 8:+68512988 | None:intergenic |
TGATTATATGAGTGAGATTG+TGG | 0.565961 | 8:-68512452 | MsaT045104.1:CDS |
TCATCCAAGTTACTAAAATG+TGG | 0.567439 | 8:+68512799 | None:intergenic |
ATGGTGGATTTCACAAGTCT+TGG | 0.570027 | 8:-68512547 | MsaT045104.1:CDS |
TGGTTTGCTGATGAACTTGG+AGG | 0.570787 | 8:+68512406 | None:intergenic |
ACTTTCAAACAAAGAAAGCA+TGG | 0.571291 | 8:-68513099 | MsaT045104.1:CDS |
TCAGTAAGATCTACCCAACT+TGG | 0.575658 | 8:-68512825 | MsaT045104.1:CDS |
TATAATCAGGATCAACAACT+TGG | 0.576059 | 8:+68512578 | None:intergenic |
CACCATCAAACCAACTTAGT+GGG | 0.576425 | 8:-68512618 | MsaT045104.1:CDS |
AGTGGGCTTGTGGAGAGGAA+TGG | 0.577682 | 8:-68512601 | MsaT045104.1:CDS |
ATTCTGATACTCTTGAAGCA+AGG | 0.580425 | 8:+68512951 | None:intergenic |
AACTTAGTGGGCTTGTGGAG+AGG | 0.584533 | 8:-68512606 | MsaT045104.1:CDS |
TGATTATACAAGTGAGATGG+TGG | 0.591946 | 8:-68512563 | MsaT045104.1:CDS |
ACAAATAGAAACTAGCACCT+TGG | 0.593239 | 8:-68512692 | MsaT045104.1:CDS |
AGTTGGGTTGATGATGAACT+AGG | 0.593899 | 8:+68512514 | None:intergenic |
TGGTTTGATGGTGAACTAGG+AGG | 0.598871 | 8:+68512628 | None:intergenic |
AATCATCTCACATATATCCA+AGG | 0.609547 | 8:+68512675 | None:intergenic |
TGGATAAATCAATTAGATGA+CGG | 0.620408 | 8:-68512355 | MsaT045104.1:CDS |
AAACAAAGATTAAGAAAGTG+CGG | 0.626571 | 8:-68512858 | MsaT045104.1:CDS |
TCCTGATTATACAAGTGAGA+TGG | 0.678910 | 8:-68512566 | MsaT045104.1:CDS |
TGGGTTGATGATGAACTAGG+AGG | 0.698401 | 8:+68512517 | None:intergenic |
ATAATATTGAACCTACGACA+TGG | 0.717032 | 8:-68512999 | MsaT045104.1:CDS |
AAGTTGGGTAGATCTTACTG+AGG | 0.750378 | 8:+68512827 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr8 | gene | 68512297 | 68513178 | 68512297 | ID=MsaG045104 |
Chr8 | mRNA | 68512297 | 68513178 | 68512297 | ID=MsaT045104.1;Parent=MsaG045104 |
Chr8 | exon | 68512297 | 68513178 | 68512297 | ID=MsaT045104.1.exon1;Parent=MsaT045104.1 |
Chr8 | CDS | 68512297 | 68513178 | 68512297 | ID=cds.MsaT045104.1;Parent=MsaT045104.1 |
Gene Sequence |
Protein sequence |