AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa ssp. caerulea / MsaG045209


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG045209 MtrunA17_Chr4g0060721 98.204 334 6 0 1 334 1 334 0.0 685
MsaG045209 MtrunA17_Chr3g0092401 56.232 345 106 10 1 334 1 311 7.22e-122 353
MsaG045209 MtrunA17_Chr6g0453211 53.374 326 129 8 2 321 1 309 5.23e-106 313
MsaG045209 MtrunA17_Chr7g0217221 64.378 233 56 4 2 221 1 219 1.99e-101 299
MsaG045209 MtrunA17_Chr7g0254411 60.714 224 56 4 2 224 1 193 1.27e-81 251
MsaG045209 MtrunA17_Chr7g0217741 54.819 166 64 3 2 156 1 166 2.83e-60 195
MsaG045209 MtrunA17_Chr6g0453471 52.071 169 67 3 2 156 1 169 1.76e-59 195
MsaG045209 MtrunA17_Chr4g0039971 69.231 117 36 0 1 117 1 117 1.69e-58 192
MsaG045209 MtrunA17_Chr1g0203411 66.949 118 39 0 2 119 1 118 3.96e-58 189
MsaG045209 MtrunA17_Chr1g0187761 66.116 121 41 0 2 122 1 121 8.77e-58 187
MsaG045209 MtrunA17_Chr8g0346561 58.209 134 56 0 2 135 1 134 9.10e-57 186
MsaG045209 MtrunA17_Chr2g0323411 65.517 116 40 0 2 117 1 116 9.48e-57 187
MsaG045209 MtrunA17_Chr4g0068061 68.103 116 37 0 2 117 1 116 1.21e-56 187
MsaG045209 MtrunA17_Chr3g0115821 67.241 116 38 0 2 117 1 116 3.92e-56 186
MsaG045209 MtrunA17_Chr4g0042671 66.102 118 40 0 2 119 1 118 6.94e-56 187
MsaG045209 MtrunA17_Chr2g0281071 66.667 117 38 1 2 117 1 117 1.57e-54 181
MsaG045209 MtrunA17_Chr7g0274581 44.271 192 102 2 2 188 1 192 3.42e-54 176
MsaG045209 MtrunA17_Chr7g0261281 61.667 120 46 0 2 121 1 120 5.62e-54 178
MsaG045209 MtrunA17_Chr1g0167661 64.655 116 41 0 2 117 1 116 5.79e-54 177
MsaG045209 MtrunA17_Chr4g0037141 48.913 184 85 4 2 183 1 177 7.30e-54 178
MsaG045209 MtrunA17_Chr1g0167691 64.655 116 41 0 2 117 1 116 1.15e-53 176
MsaG045209 MtrunA17_Chr8g0349261 66.102 118 38 2 2 117 1 118 1.26e-53 178
MsaG045209 MtrunA17_Chr7g0275911 61.157 121 46 1 2 121 1 121 2.06e-53 176
MsaG045209 MtrunA17_Chr4g0048511 64.957 117 40 1 2 117 1 117 2.48e-53 179
MsaG045209 MtrunA17_Chr5g0410961 58.015 131 49 1 2 132 1 125 5.88e-53 177
MsaG045209 MtrunA17_Chr3g0110351 62.712 118 44 0 2 119 1 118 3.64e-52 174
MsaG045209 MtrunA17_Chr5g0434571 62.185 119 45 0 1 119 36 154 5.26e-52 175
MsaG045209 MtrunA17_Chr3g0131121 57.778 135 51 1 2 136 1 129 1.02e-51 173
MsaG045209 MtrunA17_Chr5g0395281 62.931 116 43 0 2 117 1 116 1.25e-51 173
MsaG045209 MtrunA17_Chr3g0103281 64.655 116 41 0 2 117 1 116 2.93e-51 172
MsaG045209 MtrunA17_Chr4g0057031 62.712 118 44 0 2 119 1 118 1.41e-50 169
MsaG045209 MtrunA17_Chr5g0400821 42.647 204 107 3 2 200 1 199 6.92e-50 168
MsaG045209 MtrunA17_Chr1g0194951 62.931 116 43 0 2 117 1 116 1.64e-49 169
MsaG045209 MtrunA17_Chr4g0070611 59.350 123 50 0 2 124 1 123 3.46e-49 166
MsaG045209 MtrunA17_Chr7g0264641 61.538 117 44 1 2 117 1 117 4.24e-49 165
MsaG045209 MtrunA17_Chr4g0070641 59.350 123 50 0 2 124 1 123 4.45e-49 162
MsaG045209 MtrunA17_Chr8g0385321 62.069 116 44 0 2 117 1 116 4.84e-49 166
MsaG045209 MtrunA17_Chr3g0135311 62.393 117 43 1 2 117 1 117 6.76e-49 167
MsaG045209 MtrunA17_Chr7g0228891 61.207 116 45 0 2 117 1 116 7.87e-49 164
MsaG045209 MtrunA17_Chr6g0452271 57.627 118 50 0 2 119 1 118 1.05e-48 166
MsaG045209 MtrunA17_Chr1g0151941 59.829 117 46 1 2 117 1 117 4.39e-48 162
MsaG045209 MtrunA17_Chr3g0121241 59.821 112 45 0 6 117 35 146 6.94e-48 163
MsaG045209 MtrunA17_Chr4g0028311 60.684 117 45 1 2 117 1 117 8.31e-48 163
MsaG045209 MtrunA17_Chr5g0435101 61.207 116 45 0 4 119 2 117 8.62e-48 160
MsaG045209 MtrunA17_Chr1g0152011 60.684 117 45 1 2 117 1 117 1.01e-47 164
MsaG045209 MtrunA17_Chr2g0311221 60.000 110 44 0 3 112 4 113 1.12e-47 163
MsaG045209 MtrunA17_Chr7g0269831 62.931 116 43 0 2 117 1 116 4.25e-47 162
MsaG045209 MtrunA17_Chr2g0327351 63.063 111 40 1 2 111 1 111 8.82e-47 160
MsaG045209 MtrunA17_Chr8g0387421 58.475 118 49 0 2 119 1 118 3.69e-46 159
MsaG045209 MtrunA17_Chr4g0022931 54.762 126 56 1 2 126 1 126 1.59e-45 156
MsaG045209 MtrunA17_Chr2g0323351 51.880 133 64 0 2 134 1 133 3.54e-45 154
MsaG045209 MtrunA17_Chr1g0193371 47.059 170 81 3 2 168 1 164 4.76e-45 157
MsaG045209 MtrunA17_Chr4g0072751 48.649 185 73 6 2 170 1 179 8.80e-45 156
MsaG045209 MtrunA17_Chr2g0309911 58.559 111 46 0 7 117 5 115 2.02e-44 154
MsaG045209 MtrunA17_Chr4g0022901 49.640 139 69 1 2 139 1 139 3.83e-44 152
MsaG045209 MtrunA17_Chr4g0058631 54.688 128 52 1 2 129 1 122 4.34e-44 155
MsaG045209 MtrunA17_Chr4g0054391 60.000 110 43 1 2 110 1 110 4.95e-44 152
MsaG045209 MtrunA17_Chr1g0193801 57.759 116 49 0 2 117 1 116 8.82e-44 154
MsaG045209 MtrunA17_Chr7g0270891 56.897 116 50 0 2 117 1 116 1.94e-43 153
MsaG045209 MtrunA17_Chr4g0022911 48.529 136 69 1 2 136 1 136 2.44e-43 151
MsaG045209 MtrunA17_Chr5g0397231 60.000 110 44 0 2 111 1 110 2.65e-43 152
MsaG045209 MtrunA17_Chr5g0417821 57.944 107 45 0 11 117 5 111 6.14e-43 150
MsaG045209 MtrunA17_Chr3g0117091 54.688 128 52 1 2 129 1 122 7.96e-43 151
MsaG045209 MtrunA17_Chr1g0211161 54.264 129 53 1 1 129 1 123 1.21e-42 147
MsaG045209 MtrunA17_Chr2g0330041 55.172 116 52 0 2 117 1 116 1.33e-42 152
MsaG045209 MtrunA17_Chr4g0044421 54.237 118 54 0 2 119 1 118 2.07e-42 145
MsaG045209 MtrunA17_Chr6g0487491 52.206 136 56 2 2 128 1 136 2.11e-42 147
MsaG045209 MtrunA17_Chr8g0342541 56.034 116 51 0 2 117 1 116 2.18e-42 150
MsaG045209 MtrunA17_Chr7g0271241 61.468 109 42 0 2 110 1 109 2.29e-42 150
MsaG045209 MtrunA17_Chr8g0342521 56.034 116 51 0 2 117 1 116 7.15e-42 149
MsaG045209 MtrunA17_Chr3g0099131 61.538 104 40 0 13 116 41 144 1.04e-41 152
MsaG045209 MtrunA17_Chr7g0240821 59.633 109 44 0 17 125 5 113 2.59e-41 144
MsaG045209 MtrunA17_Chr4g0055981 53.659 123 57 0 13 135 55 177 2.96e-41 144
MsaG045209 MtrunA17_Chr4g0022881 51.880 133 60 1 2 134 1 129 4.01e-41 143
MsaG045209 MtrunA17_Chr8g0354661 60.577 104 41 0 13 116 37 140 4.87e-41 150
MsaG045209 MtrunA17_Chr4g0022891 54.867 113 51 0 2 114 1 113 1.03e-40 142
MsaG045209 MtrunA17_Chr8g0343831 58.879 107 44 0 13 119 8 114 1.33e-40 142
MsaG045209 MtrunA17_Chr3g0080861 59.615 104 42 0 13 116 37 140 2.46e-40 148
MsaG045209 MtrunA17_Chr2g0322521 59.813 107 43 0 10 116 26 132 3.62e-40 145
MsaG045209 MtrunA17_Chr1g0203441 52.000 125 53 1 14 138 14 131 9.62e-40 141
MsaG045209 MtrunA17_Chr7g0228231 51.754 114 55 0 13 126 14 127 1.39e-39 139
MsaG045209 MtrunA17_Chr1g0168661 52.846 123 58 0 14 136 22 144 1.71e-39 140
MsaG045209 MtrunA17_Chr2g0328771 54.054 111 51 0 13 123 20 130 2.01e-39 141
MsaG045209 MtrunA17_Chr6g0470971 43.605 172 87 2 8 176 9 173 4.83e-39 139
MsaG045209 MtrunA17_Chr8g0342481 53.846 117 53 1 2 117 1 117 8.06e-39 142
MsaG045209 MtrunA17_Chr4g0032401 56.190 105 46 0 13 117 17 121 8.33e-39 140
MsaG045209 MtrunA17_Chr5g0434911 55.455 110 49 0 8 117 16 125 1.24e-38 138
MsaG045209 MtrunA17_Chr5g0434931 57.547 106 45 0 12 117 34 139 1.91e-38 138
MsaG045209 MtrunA17_Chr3g0088461 55.238 105 47 0 13 117 22 126 3.55e-38 139
MsaG045209 MtrunA17_Chr1g0186061 58.252 103 43 0 14 116 21 123 3.72e-38 136
MsaG045209 MtrunA17_Chr4g0042611 64.773 88 31 0 2 89 1 88 5.11e-38 130
MsaG045209 MtrunA17_Chr2g0294811 60.870 92 36 0 2 93 1 92 7.99e-38 131
MsaG045209 MtrunA17_Chr6g0450101 50.000 120 58 1 2 119 1 120 8.81e-38 134
MsaG045209 MtrunA17_Chr1g0194301 41.500 200 101 6 9 204 29 216 1.41e-37 135
MsaG045209 MtrunA17_Chr1g0194291 55.238 105 47 0 12 116 20 124 2.28e-37 134
MsaG045209 MtrunA17_Chr1g0154031 55.769 104 46 0 13 116 76 179 3.55e-37 137
MsaG045209 MtrunA17_Chr2g0327821 53.846 104 48 0 13 116 6 109 5.30e-37 132
MsaG045209 MtrunA17_Chr7g0220341 52.542 118 54 1 11 126 23 140 5.48e-37 134
MsaG045209 MtrunA17_Chr5g0434831 55.660 106 47 0 12 117 6 111 1.52e-36 130
MsaG045209 MtrunA17_Chr1g0209661 52.885 104 49 0 13 116 27 130 6.86e-36 132
MsaG045209 MtrunA17_Chr5g0434841 54.717 106 48 0 12 117 19 124 2.06e-35 130
MsaG045209 MtrunA17_Chr7g0228991 55.660 106 47 0 12 117 28 133 2.87e-35 129
MsaG045209 MtrunA17_Chr7g0247131 72.603 73 20 0 45 117 10 82 1.06e-34 127
MsaG045209 MtrunA17_Chr8g0360111 55.882 102 45 0 12 113 24 125 1.22e-34 127
MsaG045209 MtrunA17_Chr4g0068921 50.467 107 53 0 9 115 20 126 2.26e-33 122
MsaG045209 MtrunA17_Chr8g0334881 50.962 104 50 1 13 115 10 113 3.45e-33 125
MsaG045209 MtrunA17_Chr2g0293911 51.402 107 52 0 9 115 20 126 4.53e-33 125
MsaG045209 MtrunA17_Chr1g0180391 50.459 109 54 0 13 121 19 127 7.65e-33 121
MsaG045209 MtrunA17_Chr5g0395221 60.714 84 33 0 6 89 5 88 1.02e-32 117
MsaG045209 MtrunA17_Chr4g0013361 49.074 108 54 1 9 115 6 113 1.62e-32 122
MsaG045209 MtrunA17_Chr5g0441131 50.000 110 53 2 11 119 7 115 8.17e-32 117
MsaG045209 MtrunA17_Chr3g0099141 56.471 85 37 0 13 97 40 124 2.43e-31 115
MsaG045209 MtrunA17_Chr5g0440781 48.598 107 53 2 14 119 13 118 3.96e-31 115
MsaG045209 MtrunA17_Chr5g0440761 34.314 204 107 6 14 198 13 208 8.90e-31 117
MsaG045209 MtrunA17_Chr1g0192411 46.296 108 58 0 9 116 8 115 1.55e-30 119
MsaG045209 MtrunA17_Chr5g0441141 48.598 107 53 2 14 119 13 118 2.91e-30 116
MsaG045209 MtrunA17_Chr4g0008551 52.941 102 47 1 15 116 38 138 3.05e-30 117
MsaG045209 MtrunA17_Chr2g0323321 48.571 105 53 1 2 106 1 104 1.78e-29 109
MsaG045209 MtrunA17_Chr8g0342511 54.023 87 40 0 2 88 1 87 4.43e-29 107
MsaG045209 MtrunA17_Chr4g0030881 46.364 110 52 1 14 116 8 117 4.78e-29 112
MsaG045209 MtrunA17_Chr8g0342531 43.966 116 60 1 2 112 1 116 1.96e-28 108
MsaG045209 MtrunA17_Chr5g0401731 49.057 106 45 2 15 116 15 115 8.33e-27 107
MsaG045209 MtrunA17_Chr4g0053431 45.217 115 54 2 15 125 5 114 1.24e-26 106
MsaG045209 MtrunA17_Chr6g0454921 47.170 106 47 2 15 116 15 115 1.74e-26 104
MsaG045209 MtrunA17_Chr3g0133601 48.598 107 54 1 10 116 32 137 2.59e-26 104
MsaG045209 MtrunA17_Chr8g0342461 50.000 90 44 1 2 90 1 90 1.25e-25 100
MsaG045209 MtrunA17_Chr8g0342471 50.000 90 44 1 2 90 1 90 3.80e-25 98.6
MsaG045209 MtrunA17_Chr7g0229101 64.286 70 25 0 45 114 4 73 3.90e-25 100
MsaG045209 MtrunA17_Chr7g0238651 39.474 114 67 1 18 129 10 123 8.47e-24 100
MsaG045209 MtrunA17_Chr7g0229131 57.534 73 31 0 45 117 4 76 9.80e-24 95.9
MsaG045209 MtrunA17_Chr3g0139671 41.346 104 60 1 15 118 85 187 1.29e-23 102
MsaG045209 MtrunA17_Chr3g0139671 31.858 113 75 2 15 126 33 144 1.77e-11 65.5
MsaG045209 MtrunA17_Chr6g0480581 43.564 101 56 1 15 115 4 103 1.10e-22 94.7
MsaG045209 MtrunA17_Chr7g0238631 43.636 110 53 2 13 118 111 215 1.15e-22 98.6
MsaG045209 MtrunA17_Chr5g0429661 41.071 112 65 1 15 126 122 232 1.39e-22 96.7
MsaG045209 MtrunA17_Chr1g0157731 37.736 106 65 1 13 118 89 193 1.79e-22 98.6
MsaG045209 MtrunA17_Chr4g0058991 42.342 111 63 1 9 119 203 312 2.13e-22 97.4
MsaG045209 MtrunA17_Chr5g0425591 45.882 85 45 1 11 94 7 91 2.39e-22 89.7
MsaG045209 MtrunA17_Chr5g0434901 60.294 68 27 0 47 114 7 74 2.80e-22 90.5
MsaG045209 MtrunA17_Chr5g0437321 46.465 99 52 1 15 113 19 116 2.23e-21 92.4
MsaG045209 MtrunA17_Chr3g0117511 39.640 111 66 1 9 119 177 286 3.07e-21 94.0
MsaG045209 MtrunA17_Chr4g0042501 42.202 109 61 2 15 123 105 211 1.54e-20 91.7
MsaG045209 MtrunA17_Chr6g0460671 41.121 107 61 2 10 116 95 199 1.59e-20 90.9
MsaG045209 MtrunA17_Chr5g0417621 42.157 102 58 1 15 116 134 234 4.69e-20 90.5
MsaG045209 MtrunA17_Chr7g0228531 39.286 112 66 2 11 122 216 325 1.53e-19 89.0
MsaG045209 MtrunA17_Chr6g0460661 39.450 109 65 1 15 123 16 123 2.17e-19 84.0
MsaG045209 MtrunA17_Chr3g0093811 52.000 75 36 0 45 119 14 88 2.77e-19 86.3
MsaG045209 MtrunA17_Chr6g0453751 43.478 92 43 2 12 94 19 110 3.88e-19 82.4
MsaG045209 MtrunA17_Chr3g0125801 43.137 102 57 1 15 116 16 116 1.89e-18 84.3
MsaG045209 MtrunA17_Chr5g0397841 40.196 102 52 2 13 110 108 204 7.50e-18 84.3
MsaG045209 MtrunA17_Chr8g0362231 30.601 183 113 4 18 187 25 206 1.93e-17 82.8
MsaG045209 MtrunA17_Chr7g0254261 39.216 102 61 1 15 116 89 189 2.22e-17 82.0
MsaG045209 MtrunA17_Chr7g0228481 39.604 101 59 2 11 111 216 314 2.49e-16 79.3
MsaG045209 MtrunA17_Chr1g0177901 39.604 101 59 2 24 124 3 101 3.16e-16 76.3
MsaG045209 MtrunA17_Chr1g0193901 53.448 58 26 1 13 69 11 68 4.90e-16 73.2
MsaG045209 MtrunA17_Chr1g0193891 53.448 58 26 1 13 69 11 68 4.90e-16 73.2
MsaG045209 MtrunA17_Chr1g0193871 53.448 58 26 1 13 69 11 68 4.90e-16 73.2
MsaG045209 MtrunA17_Chr1g0193881 53.448 58 26 1 13 69 11 68 4.90e-16 73.2
MsaG045209 MtrunA17_Chr7g0228401 39.785 93 54 2 26 118 290 380 9.82e-16 77.8
MsaG045209 MtrunA17_Chr7g0247141 60.417 48 18 1 2 48 1 48 2.83e-15 69.7
MsaG045209 MtrunA17_Chr5g0416341 36.364 99 62 1 18 116 29 126 3.61e-15 76.3
MsaG045209 MtrunA17_Chr7g0233061 36.207 116 62 4 15 124 180 289 2.80e-14 72.8
MsaG045209 MtrunA17_Chr5g0434871 58.140 43 18 0 75 117 2 44 1.14e-11 59.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG045209 AT5G62470.2 50.535 374 121 11 2 333 1 352 9.40e-104 308
MsaG045209 AT3G47600.1 51.567 351 123 12 2 328 1 328 1.40e-102 305
MsaG045209 AT5G62470.1 50.535 374 120 12 2 333 1 351 4.42e-102 304
MsaG045209 AT1G74650.1 49.435 354 124 9 2 327 1 327 8.17e-102 303
MsaG045209 AT3G28910.1 48.968 339 116 6 2 313 1 309 2.53e-101 301
MsaG045209 AT1G08810.1 47.493 339 90 10 2 321 1 270 3.54e-86 261
MsaG045209 AT3G47600.2 46.254 307 118 12 46 328 39 322 1.88e-66 212
MsaG045209 AT5G15310.4 52.973 185 73 4 2 174 1 183 1.10e-61 197
MsaG045209 AT3G01140.2 53.409 176 68 3 2 165 1 174 1.69e-61 200
MsaG045209 AT5G15310.2 52.973 185 73 4 2 174 1 183 2.54e-61 199
MsaG045209 AT5G15310.1 52.973 185 73 4 2 174 1 183 3.50e-61 199
MsaG045209 AT3G01140.1 51.977 177 71 3 1 165 43 217 1.45e-58 194
MsaG045209 AT3G61250.1 50.581 172 63 3 2 157 1 166 6.53e-58 189
MsaG045209 AT3G23250.1 65.000 120 42 0 2 121 1 120 6.42e-57 186
MsaG045209 AT1G06180.1 64.000 125 45 0 2 126 1 125 7.70e-57 185
MsaG045209 AT2G31180.1 64.706 119 42 0 2 120 1 119 1.37e-56 184
MsaG045209 AT4G21440.1 66.379 116 39 0 2 117 1 116 1.88e-55 184
MsaG045209 AT4G28110.1 63.793 116 42 0 2 117 1 116 4.80e-55 181
MsaG045209 AT3G02940.2 64.655 116 41 0 2 117 1 116 4.84e-55 182
MsaG045209 AT5G16770.4 65.517 116 40 0 2 117 1 116 9.29e-55 182
MsaG045209 AT5G16770.3 65.517 116 40 0 2 117 1 116 9.29e-55 182
MsaG045209 AT3G02940.1 64.655 116 41 0 2 117 1 116 9.90e-55 182
MsaG045209 AT3G02940.3 64.655 116 41 0 2 117 1 116 9.90e-55 182
MsaG045209 AT5G16770.1 65.517 116 40 0 2 117 1 116 2.14e-54 181
MsaG045209 AT5G16770.2 65.517 116 40 0 2 117 1 116 2.14e-54 181
MsaG045209 AT1G35515.1 65.517 116 40 0 2 117 1 116 5.22e-54 176
MsaG045209 AT4G05100.1 64.706 119 41 1 2 119 1 119 7.75e-54 179
MsaG045209 AT5G49330.1 65.517 116 40 0 2 117 1 116 8.73e-54 180
MsaG045209 AT4G09460.1 65.517 116 40 0 2 117 1 116 1.09e-53 176
MsaG045209 AT1G22640.1 64.655 116 41 0 2 117 1 116 4.05e-53 176
MsaG045209 AT1G66230.1 49.383 162 69 1 2 150 1 162 6.23e-53 176
MsaG045209 AT2G16720.1 65.517 116 40 0 2 117 1 116 7.96e-53 175
MsaG045209 AT1G56160.1 60.870 115 45 0 3 117 4 118 1.52e-52 175
MsaG045209 AT1G34670.1 63.793 116 42 0 2 117 1 116 1.90e-52 177
MsaG045209 AT4G38620.1 63.793 116 42 0 2 117 1 116 3.24e-52 174
MsaG045209 AT1G79180.1 58.871 124 51 0 3 126 4 127 6.85e-52 174
MsaG045209 AT2G47460.1 65.517 116 40 0 2 117 1 116 1.09e-51 175
MsaG045209 AT3G62610.1 67.241 116 38 0 2 117 1 116 1.90e-51 174
MsaG045209 AT5G56110.1 64.655 116 41 0 2 117 1 116 2.39e-51 173
MsaG045209 AT4G34990.1 64.655 116 41 0 2 117 1 116 4.72e-51 171
MsaG045209 AT3G13540.1 56.489 131 51 1 6 136 16 140 5.13e-51 170
MsaG045209 AT5G54230.1 65.517 116 40 0 2 117 1 116 5.41e-51 172
MsaG045209 AT4G17785.2 64.103 117 41 1 2 117 1 117 1.11e-50 172
MsaG045209 AT4G17785.1 64.103 117 41 1 2 117 1 117 1.73e-50 172
MsaG045209 AT5G07690.1 54.745 137 56 1 2 138 1 131 2.11e-50 171
MsaG045209 AT5G61420.2 61.207 116 45 0 2 117 1 116 2.17e-50 172
MsaG045209 AT1G18570.1 63.025 119 43 1 2 119 1 119 3.77e-50 171
MsaG045209 AT5G60890.1 53.571 140 59 1 2 141 1 134 6.12e-50 168
MsaG045209 AT4G37780.1 61.538 117 44 1 2 117 1 117 8.15e-50 168
MsaG045209 AT4G12350.1 61.017 118 46 0 2 119 1 118 1.21e-49 167
MsaG045209 AT5G10280.1 61.207 116 45 0 2 117 1 116 1.87e-49 168
MsaG045209 AT1G16490.1 51.079 139 62 1 3 135 4 142 2.47e-49 166
MsaG045209 AT5G16600.1 59.322 118 48 0 2 119 1 118 3.75e-49 167
MsaG045209 AT5G65230.1 61.207 116 45 0 2 117 1 116 7.91e-49 166
MsaG045209 AT1G74080.1 58.475 118 49 0 2 119 1 118 3.02e-48 165
MsaG045209 AT5G07700.1 45.614 171 78 2 2 163 1 165 5.05e-48 165
MsaG045209 AT5G07700.2 45.614 171 78 2 2 163 1 165 5.05e-48 165
MsaG045209 AT4G22680.1 60.169 118 47 0 2 119 1 118 7.31e-48 162
MsaG045209 AT5G57620.1 58.974 117 47 1 2 117 1 117 1.81e-47 163
MsaG045209 AT3G49690.1 59.504 121 48 1 2 121 1 121 3.01e-47 162
MsaG045209 AT5G23000.1 58.974 117 47 1 2 117 1 117 9.05e-47 161
MsaG045209 AT5G62320.1 58.065 124 45 1 1 117 1 124 1.00e-46 159
MsaG045209 AT3G12820.1 60.345 116 46 0 4 119 5 120 1.66e-46 158
MsaG045209 AT5G14340.1 60.345 116 46 0 2 117 13 128 1.66e-46 159
MsaG045209 AT5G65790.1 58.974 117 47 1 2 117 1 117 5.07e-46 160
MsaG045209 AT1G74430.1 61.017 118 46 0 2 119 1 118 5.84e-46 157
MsaG045209 AT1G79180.2 47.134 157 50 1 3 126 4 160 1.18e-45 158
MsaG045209 AT2G36890.1 58.120 117 48 1 2 117 1 117 2.87e-45 156
MsaG045209 AT2G36890.2 58.120 117 48 1 2 117 42 158 3.83e-45 157
MsaG045209 AT1G63910.1 57.627 118 50 0 2 119 1 118 4.51e-45 158
MsaG045209 AT5G26660.1 55.469 128 51 1 2 129 1 122 5.19e-45 157
MsaG045209 AT4G01680.3 58.621 116 48 0 2 117 1 116 6.48e-45 154
MsaG045209 AT5G14750.1 55.200 125 55 1 14 137 17 141 8.04e-45 152
MsaG045209 AT4G01680.1 58.621 116 48 0 2 117 1 116 3.76e-44 154
MsaG045209 AT1G57560.1 57.627 118 50 0 2 119 1 118 6.18e-44 153
MsaG045209 AT1G09540.1 58.475 118 49 0 2 119 1 118 7.93e-44 154
MsaG045209 AT1G57560.2 57.627 118 50 0 2 119 1 118 9.53e-44 152
MsaG045209 AT2G32460.1 62.037 108 41 0 9 116 14 121 1.09e-43 157
MsaG045209 AT1G18710.1 56.780 118 51 0 2 119 1 118 1.11e-43 151
MsaG045209 AT3G13890.2 55.172 116 52 0 2 117 1 116 1.15e-43 154
MsaG045209 AT2G32460.2 59.483 116 40 1 1 116 1 109 1.19e-43 156
MsaG045209 AT5G40330.1 60.577 104 41 0 14 117 13 116 3.57e-43 149
MsaG045209 AT3G28470.1 56.364 110 48 0 2 111 1 110 3.69e-43 151
MsaG045209 AT3G12720.1 38.462 195 104 3 7 201 16 194 8.68e-43 150
MsaG045209 AT3G27920.1 58.182 110 46 0 14 123 15 124 3.27e-42 146
MsaG045209 AT1G74650.3 38.129 278 117 9 78 327 1 251 7.24e-42 146
MsaG045209 AT5G55020.1 60.952 105 41 0 13 117 26 130 2.22e-41 151
MsaG045209 AT3G28910.2 38.132 257 114 5 78 313 1 233 2.49e-41 145
MsaG045209 AT5G52600.1 53.448 116 54 0 13 128 12 127 2.91e-41 143
MsaG045209 AT3G01530.1 58.095 105 44 0 13 117 25 129 4.25e-41 143
MsaG045209 AT5G35550.1 56.364 110 48 0 13 122 14 123 6.64e-41 144
MsaG045209 AT5G06100.1 58.095 105 44 0 12 116 31 135 6.79e-41 149
MsaG045209 AT4G01680.2 53.125 128 48 1 2 117 1 128 1.11e-40 145
MsaG045209 AT3G13890.1 51.200 125 52 1 2 117 1 125 1.35e-40 146
MsaG045209 AT2G26960.1 59.434 106 43 0 10 115 17 122 1.54e-40 147
MsaG045209 AT5G06100.5 58.095 105 44 0 12 116 31 135 2.89e-40 148
MsaG045209 AT5G06100.2 58.095 105 44 0 12 116 31 135 2.89e-40 148
MsaG045209 AT5G06100.3 58.095 105 44 0 12 116 31 135 2.89e-40 148
MsaG045209 AT5G06100.4 58.095 105 44 0 12 116 31 135 2.89e-40 148
MsaG045209 AT3G11440.2 57.692 104 44 0 13 116 41 144 2.92e-40 147
MsaG045209 AT3G30210.1 54.839 124 55 1 12 135 26 148 9.12e-40 141
MsaG045209 AT3G11440.3 57.692 104 44 0 13 116 41 144 1.31e-39 147
MsaG045209 AT3G11440.4 57.692 104 44 0 13 116 41 144 1.31e-39 147
MsaG045209 AT3G11440.1 57.692 104 44 0 13 116 41 144 1.31e-39 147
MsaG045209 AT3G24310.1 56.522 115 50 0 12 126 17 131 1.41e-39 140
MsaG045209 AT4G26930.1 58.252 103 43 0 13 115 19 121 5.20e-39 142
MsaG045209 AT1G66370.1 58.095 105 44 0 12 116 7 111 5.35e-39 139
MsaG045209 AT4G13480.1 52.308 130 61 1 14 143 7 135 1.05e-38 138
MsaG045209 AT3G27810.1 47.581 124 65 0 13 136 20 143 1.64e-38 137
MsaG045209 AT5G12870.1 54.206 107 49 0 13 119 18 124 5.42e-38 137
MsaG045209 AT3G08500.1 54.286 105 48 0 13 117 30 134 6.70e-38 138
MsaG045209 AT5G40350.1 51.304 115 56 0 13 127 17 131 8.13e-38 134
MsaG045209 AT2G47190.1 53.704 108 50 0 9 116 16 123 1.62e-37 135
MsaG045209 AT1G25340.1 53.097 113 50 1 14 123 19 131 2.88e-36 132
MsaG045209 AT4G25560.1 53.571 112 52 0 14 125 11 122 7.24e-36 131
MsaG045209 AT5G59780.3 54.369 103 47 0 14 116 9 111 9.87e-36 130
MsaG045209 AT3G46130.1 53.333 105 49 0 12 116 8 112 1.01e-35 130
MsaG045209 AT1G48000.1 55.340 103 46 0 13 115 32 134 2.38e-35 129
MsaG045209 AT3G48920.1 50.000 108 54 0 14 121 19 126 4.93e-35 129
MsaG045209 AT1G66380.1 57.143 105 45 0 12 116 7 111 1.06e-34 124
MsaG045209 AT1G68320.1 52.885 104 49 0 13 116 19 122 1.18e-34 128
MsaG045209 AT5G52260.1 55.556 108 48 0 14 121 13 120 1.22e-34 127
MsaG045209 AT1G74650.2 35.926 270 118 9 86 327 4 246 1.05e-33 125
MsaG045209 AT3G60460.1 49.541 109 54 1 8 115 6 114 1.70e-33 125
MsaG045209 AT1G66390.1 56.190 105 46 0 12 116 7 111 2.13e-33 124
MsaG045209 AT1G56650.1 56.190 105 46 0 12 116 7 111 3.27e-33 123
MsaG045209 AT1G25340.2 51.327 113 47 2 14 123 19 126 8.57e-33 123
MsaG045209 AT1G25340.3 51.327 113 47 2 14 123 19 126 1.23e-32 123
MsaG045209 AT5G49620.1 52.336 107 51 0 9 115 22 128 2.17e-32 123
MsaG045209 AT3G06490.1 52.336 107 51 0 9 115 15 121 4.44e-32 122
MsaG045209 AT3G53200.1 51.923 104 50 0 13 116 9 112 1.02e-31 119
MsaG045209 AT5G14750.3 56.044 91 39 1 48 137 17 107 1.98e-30 114
MsaG045209 AT2G26950.1 48.182 110 57 0 10 119 13 122 8.27e-30 117
MsaG045209 AT3G12820.2 66.667 72 24 0 48 119 1 72 1.53e-29 112
MsaG045209 AT2G39880.1 51.887 106 42 2 15 116 50 150 2.86e-29 115
MsaG045209 AT5G35550.2 62.338 77 29 0 46 122 50 126 6.08e-29 112
MsaG045209 AT5G49620.2 46.281 121 51 1 9 115 22 142 7.09e-29 114
MsaG045209 AT2G23290.1 50.943 106 43 2 15 116 13 113 1.09e-27 110
MsaG045209 AT5G26660.2 57.143 84 30 1 46 129 14 91 1.78e-27 110
MsaG045209 AT3G55730.1 49.057 106 45 2 15 116 56 156 2.62e-27 110
MsaG045209 AT4G37260.1 46.154 117 54 2 15 127 13 124 3.13e-27 109
MsaG045209 AT3G09230.1 46.729 107 48 2 15 117 55 156 5.05e-26 107
MsaG045209 AT3G46130.3 59.722 72 29 0 45 116 9 80 4.46e-25 101
MsaG045209 AT5G59780.2 60.563 71 28 0 46 116 20 90 5.40e-25 100
MsaG045209 AT3G46130.4 60.563 71 28 0 46 116 20 90 9.20e-25 100
MsaG045209 AT5G02320.1 46.602 103 54 1 15 117 127 228 1.91e-24 104
MsaG045209 AT5G02320.2 46.602 103 54 1 15 117 127 228 1.91e-24 104
MsaG045209 AT5G02320.3 46.602 103 54 1 15 117 67 168 2.26e-24 103
MsaG045209 AT3G53200.2 56.579 76 33 0 41 116 4 79 7.73e-24 97.4
MsaG045209 AT3G27810.2 46.154 91 49 0 46 136 4 94 1.14e-23 96.3
MsaG045209 AT5G40350.2 51.190 84 41 0 44 127 3 86 1.39e-23 95.9
MsaG045209 AT3G50060.1 46.226 106 48 2 15 116 6 106 1.68e-23 99.0
MsaG045209 AT5G67300.1 46.226 106 48 2 15 116 6 106 2.02e-23 98.6
MsaG045209 AT3G27785.1 41.525 118 68 1 9 126 183 299 2.02e-23 100
MsaG045209 AT1G66380.3 63.380 71 26 0 46 116 8 78 2.49e-23 93.2
MsaG045209 AT5G11510.5 40.000 115 60 2 13 123 79 188 7.07e-23 100
MsaG045209 AT5G11510.5 31.858 113 75 2 15 126 29 140 2.05e-11 65.5
MsaG045209 AT5G58850.1 38.211 123 75 1 15 137 105 226 7.24e-23 99.0
MsaG045209 AT5G11510.2 39.640 111 66 1 13 123 79 188 7.66e-23 100
MsaG045209 AT5G11510.2 31.858 113 75 2 15 126 29 140 2.37e-11 65.5
MsaG045209 AT5G11510.3 39.640 111 66 1 13 123 79 188 7.93e-23 100
MsaG045209 AT5G11510.3 31.858 113 75 2 15 126 29 140 2.56e-11 65.5
MsaG045209 AT5G11510.1 39.640 111 66 1 13 123 79 188 7.93e-23 100
MsaG045209 AT5G11510.1 31.858 113 75 2 15 126 29 140 2.56e-11 65.5
MsaG045209 AT5G11510.4 39.640 111 66 1 13 123 79 188 7.93e-23 100
MsaG045209 AT5G11510.4 31.858 113 75 2 15 126 29 140 2.56e-11 65.5
MsaG045209 AT1G69560.1 41.228 114 66 1 10 123 102 214 1.35e-22 97.1
MsaG045209 AT1G69560.2 41.228 114 66 1 10 123 118 230 1.92e-22 96.7
MsaG045209 AT4G32730.5 37.736 106 65 1 13 118 85 189 2.04e-22 99.0
MsaG045209 AT4G32730.4 37.736 106 65 1 13 118 85 189 2.04e-22 99.0
MsaG045209 AT4G32730.3 37.736 106 65 1 13 118 85 189 2.04e-22 99.0
MsaG045209 AT4G32730.2 37.736 106 65 1 13 118 85 189 2.04e-22 99.0
MsaG045209 AT4G32730.1 37.736 106 65 1 13 118 85 189 2.36e-22 98.6
MsaG045209 AT1G22640.3 65.517 58 20 0 60 117 2 59 2.62e-22 93.2
MsaG045209 AT2G37630.1 38.532 109 65 1 18 124 7 115 5.90e-22 95.5
MsaG045209 AT5G14750.4 53.165 79 36 1 60 137 2 80 7.83e-22 90.1
MsaG045209 AT5G14750.2 53.165 79 36 1 60 137 2 80 7.83e-22 90.1
MsaG045209 AT5G11050.1 38.333 120 73 1 13 132 103 221 1.12e-21 95.5
MsaG045209 AT1G17950.1 42.157 102 58 1 15 116 5 105 1.14e-21 92.8
MsaG045209 AT1G26780.1 40.541 111 65 1 13 123 96 205 1.28e-21 93.2
MsaG045209 AT3G09370.1 45.098 102 55 1 15 116 130 230 1.49e-21 95.5
MsaG045209 AT3G09370.2 45.098 102 55 1 15 116 135 235 1.50e-21 95.5
MsaG045209 AT3G09370.3 45.098 102 55 1 15 116 143 243 1.69e-21 95.5
MsaG045209 AT1G66380.2 47.959 98 50 1 12 108 7 104 1.81e-21 88.2
MsaG045209 AT5G40360.1 39.806 103 61 1 13 115 156 257 2.09e-21 94.0
MsaG045209 AT1G26780.2 40.541 111 65 1 13 123 96 205 2.75e-21 93.6
MsaG045209 AT4G18770.1 37.838 111 68 1 9 119 211 320 3.20e-21 94.4
MsaG045209 AT4G33450.1 38.333 120 68 2 4 123 13 126 4.24e-21 91.3
MsaG045209 AT3G23250.2 63.793 58 21 0 60 117 2 59 1.31e-20 89.4
MsaG045209 AT5G17800.1 41.121 107 62 1 15 121 93 198 2.20e-20 90.5
MsaG045209 AT1G18960.1 39.048 105 61 2 15 119 10 111 4.60e-20 89.4
MsaG045209 AT3G29020.1 39.450 109 65 1 15 123 65 172 6.04e-20 87.4
MsaG045209 AT1G71030.2 52.778 72 34 0 48 119 1 72 7.51e-20 85.9
MsaG045209 AT5G39700.1 37.719 114 70 1 16 129 57 169 8.24e-20 86.3
MsaG045209 AT1G71030.1 52.778 72 34 0 48 119 15 86 1.01e-19 85.9
MsaG045209 AT3G29020.2 39.450 109 65 1 15 123 67 174 1.27e-19 88.2
MsaG045209 AT1G73410.1 42.157 102 58 1 15 116 6 106 2.28e-19 86.3
MsaG045209 AT1G73410.2 42.157 102 58 1 15 116 6 106 4.18e-19 84.7
MsaG045209 AT2G25230.1 41.071 112 63 3 9 119 20 129 5.82e-18 82.0
MsaG045209 AT1G08810.3 41.912 136 27 4 89 223 5 89 6.48e-18 81.3
MsaG045209 AT1G08810.2 41.912 136 27 4 89 223 5 89 6.48e-18 81.3
MsaG045209 AT1G14350.2 36.607 112 65 2 18 124 28 138 8.56e-17 81.3
MsaG045209 AT1G14350.1 36.607 112 65 2 18 124 28 138 8.56e-17 81.3
MsaG045209 AT2G02820.3 37.374 99 61 1 18 116 33 130 4.51e-16 78.2
MsaG045209 AT2G02820.1 37.374 99 61 1 18 116 33 130 8.87e-16 78.2
MsaG045209 AT2G02820.2 37.374 99 61 1 18 116 33 130 1.03e-15 78.2
MsaG045209 AT4G00540.2 36.134 119 72 2 13 128 101 218 1.05e-15 77.8
MsaG045209 AT4G00540.1 36.134 119 72 2 13 128 99 216 1.42e-15 77.8
MsaG045209 AT5G40430.1 33.929 112 72 2 8 119 47 156 2.18e-15 75.5
MsaG045209 AT4G25560.2 54.902 51 23 0 75 125 6 56 8.42e-12 64.3
MsaG045209 AT5G15310.3 38.235 102 49 4 85 174 5 104 1.73e-11 63.9
MsaG045209 AT5G59780.1 54.348 46 21 0 71 116 1 46 3.16e-11 61.6
MsaG045209 AT3G46130.2 54.348 46 21 0 71 116 1 46 5.45e-11 61.6

Find 70 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGTTCACCTCCAAGCTCTTT+TGG 0.154725 8:+70028605 MsaT045209.1:CDS
CTGATTATGCATCTCGATTT+AGG 0.240478 8:+70029370 MsaT045209.1:CDS
AACAACATGGACCTGGTAAT+TGG 0.261004 8:+70028266 MsaT045209.1:CDS
GATTAATATTAAAGCAAATA+TGG 0.292292 8:+70029464 MsaT045209.1:CDS
TGAAAACATTTCTAGATTGA+TGG 0.297412 8:+70029212 MsaT045209.1:CDS
AGCCTCAGATAAGGCTTGTT+TGG 0.361155 8:-70029061 None:intergenic
CTTTCCCATTGACCTTTATA+CGG 0.370223 8:-70029012 None:intergenic
TCGAGATGCATAATCAGATT+TGG 0.373847 8:-70029364 None:intergenic
CGTTCGCAGCTGCCGTATAA+AGG 0.376269 8:+70029000 MsaT045209.1:CDS
TTTGTTTCAGCTGATGAGTT+AGG 0.376364 8:-70029252 None:intergenic
ACATGTTTATAAGCTCTTCA+TGG 0.378049 8:-70029554 None:intergenic
CATATGGAGATGGAATATTC+AGG 0.382987 8:-70029179 None:intergenic
ACTAAGATGATATCTTCTTC+AGG 0.401704 8:-70028232 None:intergenic
GCTTATAAACATGTCATTAG+AGG 0.404105 8:+70029563 MsaT045209.1:CDS
AATCAGATTTGGTTGAGTTA+AGG 0.409124 8:-70029353 None:intergenic
GTAAGAGCTGCAGACTTAGA+TGG 0.415442 8:+70028520 MsaT045209.1:CDS
ATGTCATTGTCTGTCCTTTG+TGG 0.418613 8:-70028895 None:intergenic
GATGAGGGTTTCATCTGATC+AGG 0.419961 8:-70029123 None:intergenic
TAATATTAATCCTTTCCTCT+TGG 0.421047 8:-70029452 None:intergenic
TAGAGCAATTATACCGGTAT+TGG 0.439444 8:-70028302 None:intergenic
GGAGATGGAATATTCAGGTT+TGG 0.447433 8:-70029174 None:intergenic
TATTAATCCTTTCCTCTTGG+TGG 0.453369 8:-70029449 None:intergenic
AGCTGCCGTATAAAGGTCAA+TGG 0.472504 8:+70029007 MsaT045209.1:CDS
ATCGATATTCAGCAACATGC+AGG 0.473325 8:+70029281 MsaT045209.1:CDS
TTTCTAGATTGATGGAAACT+TGG 0.473758 8:+70029220 MsaT045209.1:CDS
GGCAAAGTACCAAGGGTTGT+AGG 0.474388 8:-70029102 None:intergenic
GGGTTGTAGGGTTATGTTGA+AGG 0.484469 8:-70029089 None:intergenic
CCACCATGTTGTGAGAAACT+AGG 0.489097 8:+70028187 MsaT045209.1:CDS
AGCAATTATACCGGTATTGG+TGG 0.493988 8:-70028299 None:intergenic
ACCTGTTGCCCAAAAGAGCT+TGG 0.499117 8:-70028614 None:intergenic
ATTGGAATACACATTTAAAG+AGG 0.511668 8:+70028926 MsaT045209.1:CDS
GATGGAATATTCAGGTTTGG+TGG 0.513419 8:-70029171 None:intergenic
TATTAAAGCAAATATGGAAA+CGG 0.514444 8:+70029470 MsaT045209.1:CDS
GCTACAAACAGATATTCATA+TGG 0.516194 8:+70029038 MsaT045209.1:CDS
CACCATGTTGTGAGAAACTA+GGG 0.518541 8:+70028188 MsaT045209.1:CDS
CTTCAACTTGAACACAAAAG+AGG 0.519329 8:+70029416 MsaT045209.1:CDS
CAACATAACCCTACAACCCT+TGG 0.522290 8:+70029093 MsaT045209.1:CDS
GCAAAGTACCAAGGGTTGTA+GGG 0.526670 8:-70029101 None:intergenic
ATAAAGGTCAATGGGAAAGA+AGG 0.529786 8:+70029016 MsaT045209.1:CDS
CTTCGACCAGGTATCAAAAG+AGG 0.533759 8:+70028552 MsaT045209.1:CDS
AGATCTGTTCCCACCAATAC+CGG 0.541923 8:+70028289 MsaT045209.1:CDS
TCTTCTTCCACCAAGAGGAA+AGG 0.547540 8:+70029442 MsaT045209.1:CDS
ATCATATATTGATGATGGGA+AGG 0.549071 8:+70028164 None:intergenic
TAGCTTGATGCATATGGAGA+TGG 0.555943 8:-70029189 None:intergenic
GCTGCCGTATAAAGGTCAAT+GGG 0.556660 8:+70029008 MsaT045209.1:CDS
GATCAAAGTAGTAACGATGA+AGG 0.558829 8:+70028961 MsaT045209.1:CDS
CGATTTAGGTCAACTCATGA+AGG 0.562437 8:+70029384 MsaT045209.1:CDS
TATTATCATATATTGATGAT+GGG 0.566306 8:+70028160 None:intergenic
TTCAACTTGAACACAAAAGA+GGG 0.572702 8:+70029417 MsaT045209.1:CDS
GGTTGTAGGGTTATGTTGAA+GGG 0.574998 8:-70029088 None:intergenic
AAGGGACAAAGCCTCAGATA+AGG 0.576279 8:-70029070 None:intergenic
ATCCCTAGTTTCTCACAACA+TGG 0.578259 8:-70028190 None:intergenic
GTTTCTTACATTCAACAACA+TGG 0.580470 8:+70028253 MsaT045209.1:CDS
CTTATAAACATGTCATTAGA+GGG 0.583066 8:+70029564 MsaT045209.1:CDS
ATATCTTCTTCAGGAGTCCA+AGG 0.586539 8:-70028223 None:intergenic
CAGGGATCAAGTTGTAGTGA+AGG 0.587215 8:+70029300 MsaT045209.1:CDS
TGTTGCCCAAAAGAGCTTGG+AGG 0.587434 8:-70028611 None:intergenic
TACATTCAACAACATGGACC+TGG 0.599526 8:+70028259 MsaT045209.1:CDS
GGAACAGATCTCCAATTACC+AGG 0.604494 8:-70028277 None:intergenic
TCGATATTCAGCAACATGCA+GGG 0.617549 8:+70029282 MsaT045209.1:CDS
CTGATCAGGCAAAGTACCAA+GGG 0.619842 8:-70029109 None:intergenic
TCTGATCAGGCAAAGTACCA+AGG 0.632255 8:-70029110 None:intergenic
AGCACAACACAAGATCATCA+TGG 0.642061 8:+70029330 MsaT045209.1:CDS
GCAATTATACCGGTATTGGT+GGG 0.647976 8:-70028298 None:intergenic
GGGTCTCTTCTTCCACCAAG+AGG 0.658408 8:+70029437 MsaT045209.1:CDS
TGGACAAACTATCTTCGACC+AGG 0.661831 8:+70028540 MsaT045209.1:CDS
GGCCAAACAAGCCTTATCTG+AGG 0.663946 8:+70029059 MsaT045209.1:CDS
CCTAGTTTCTCACAACATGG+TGG 0.699379 8:-70028187 None:intergenic
TAGCTTCATATCTTCCACAA+AGG 0.709022 8:+70028881 MsaT045209.1:CDS
CATGTTGCTGAATATCGATG+AGG 0.741627 8:-70029277 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
Chromosome Type Strat End Strand Name
Chr8 gene 70028175 70029608 70028175 ID=MsaG045209
Chr8 mRNA 70028175 70029608 70028175 ID=MsaT045209.1;Parent=MsaG045209
Chr8 exon 70028175 70028310 70028175 ID=MsaT045209.1.exon1;Parent=MsaT045209.1
Chr8 CDS 70028175 70028310 70028175 ID=cds.MsaT045209.1;Parent=MsaT045209.1
Chr8 exon 70028505 70028634 70028505 ID=MsaT045209.1.exon2;Parent=MsaT045209.1
Chr8 CDS 70028505 70028634 70028505 ID=cds.MsaT045209.1;Parent=MsaT045209.1
Chr8 exon 70028870 70029608 70028870 ID=MsaT045209.1.exon3;Parent=MsaT045209.1
Chr8 CDS 70028870 70029608 70028870 ID=cds.MsaT045209.1;Parent=MsaT045209.1
Gene Sequence

>MsaT045209.1

ATGATGGGAAGGCCACCATGTTGTGAGAAACTAGGGATTAAAAAAGGACCTTGGACTCCTGAAGAAGATATCATCTTAGTTTCTTACATTCAACAACATGGACCTGGTAATTGGAGATCTGTTCCCACCAATACCGGTTTGATGAGATGTAGTAAGAGCTGCAGACTTAGATGGACAAACTATCTTCGACCAGGTATCAAAAGAGGTAACTTCACAGACCATGAAGAGAAAATGATTGTTCACCTCCAAGCTCTTTTGGGCAACAGATGGGCTGCTATAGCTTCATATCTTCCACAAAGGACAGACAATGACATAAAAAATTATTGGAATACACATTTAAAGAGGAAGATGAACAAAGATCAAAGTAGTAACGATGAAGGTGTTGATCAAGAATCTCGTTCGCAGCTGCCGTATAAAGGTCAATGGGAAAGAAGGCTACAAACAGATATTCATATGGCCAAACAAGCCTTATCTGAGGCTTTGTCCCTTCAACATAACCCTACAACCCTTGGTACTTTGCCTGATCAGATGAAACCCTCATCAAGTTTTTCTCTTTCTCATGAACATCCACCAAACCTGAATATTCCATCTCCATATGCATCAAGCTATGAAAACATTTCTAGATTGATGGAAACTTGGATGAAATCACCTAACTCATCAGCTGAAACAAATTCCTCATCGATATTCAGCAACATGCAGGGATCAAGTTGTAGTGAAGGAGCACAAAGCACAACACAAGATCATCATGGCCTTAACTCAACCAAATCTGATTATGCATCTCGATTTAGGTCAACTCATGAAGGAAACAACAGCTTCAACTTGAACACAAAAGAGGGTCTCTTCTTCCACCAAGAGGAAAGGATTAATATTAAAGCAAATATGGAAACGGATGTTCCTCTTACTTTGCTTGAAAAATGGCTTTTTGAAGATGGGGGAGCAAGTCATGAGTGCCATGAAGAGCTTATAAACATGTCATTAGAGGGAACTACTTCAGATTTCTTTTAG

Protein sequence

>MsaT045209.1

MMGRPPCCEKLGIKKGPWTPEEDIILVSYIQQHGPGNWRSVPTNTGLMRCSKSCRLRWTNYLRPGIKRGNFTDHEEKMIVHLQALLGNRWAAIASYLPQRTDNDIKNYWNTHLKRKMNKDQSSNDEGVDQESRSQLPYKGQWERRLQTDIHMAKQALSEALSLQHNPTTLGTLPDQMKPSSSFSLSHEHPPNLNIPSPYASSYENISRLMETWMKSPNSSAETNSSSIFSNMQGSSCSEGAQSTTQDHHGLNSTKSDYASRFRSTHEGNNSFNLNTKEGLFFHQEERINIKANMETDVPLTLLEKWLFEDGGASHECHEELINMSLEGTTSDFF*