AlfalfaGEDB | MsaG045222

M. sativa ssp. caerulea / MsaG045222

KEGG: -
GO: -
PFAM: PF03101.18

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG045222	PNX79844.1	57.255	255	97	3	176	422	47	297	3.03e-94	296

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG045222	tr\|A0A2K3LMT7\|A0A2K3LMT7_TRIPR	57.255	255	97	3	176	422	47	297	1.45e-94	296

TFs/TRs:

Gene ID	Type	Classification
MsaG045222	TF	FAR1

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsaG000281	MsaG045222	0.845834	5.959097e-59	2.806733e-56
MsaG000288	MsaG045222	0.837975	6.951985e-57	2.547769e-54
MsaG000431	MsaG045222	0.808184	5.970476e-50	9.759280e-48
MsaG000683	MsaG045222	0.800259	2.619417e-48	3.562364e-46
MsaG000855	MsaG045222	0.828289	1.746691e-54	4.815394e-52
MsaG001237	MsaG045222	0.826179	5.561556e-54	1.445441e-51
MsaG001258	MsaG045222	0.804526	3.494311e-49	5.239693e-47
MsaG001531	MsaG045222	0.804905	2.914740e-49	4.409253e-47
MsaG001672	MsaG045222	0.814739	2.285009e-51	4.388076e-49
MsaG001859	MsaG045222	0.814581	2.475798e-51	4.735408e-49
MsaG002013	MsaG045222	0.829457	9.137720e-55	2.603724e-52
MsaG002218	MsaG045222	0.815448	1.592523e-51	3.113605e-49
MsaG002866	MsaG045222	0.809350	3.371990e-50	5.668521e-48
MsaG003210	MsaG045222	0.834959	4.037196e-56	1.350632e-53
MsaG003200	MsaG045222	0.812650	6.552484e-51	1.194164e-48
MsaG003201	MsaG045222	0.810420	1.990084e-50	3.433586e-48
MsaG003202	MsaG045222	0.821339	7.477089e-53	1.703784e-50
MsaG003203	MsaG045222	0.805640	2.048427e-49	3.152185e-47
MsaG003683	MsaG045222	0.841471	8.639793e-58	3.532913e-55
MsaG004105	MsaG045222	0.801985	1.166955e-48	1.650263e-46
MsaG004150	MsaG045222	0.800700	2.132044e-48	2.928709e-46
MsaG004181	MsaG045222	0.816235	1.065360e-51	2.124976e-49
MsaG004204	MsaG045222	0.810345	2.065251e-50	3.556730e-48
MsaG004373	MsaG045222	0.831734	2.547503e-55	7.751468e-53
MsaG005000	MsaG045222	0.832300	1.849689e-55	5.720858e-53
MsaG005119	MsaG045222	0.811705	1.051438e-50	1.871970e-48
MsaG005329	MsaG045222	0.802157	1.075866e-48	1.527408e-46
MsaG005401	MsaG045222	0.837858	7.447368e-57	2.719390e-54
MsaG005435	MsaG045222	0.800640	2.193375e-48	3.008816e-46
MsaG005442	MsaG045222	0.823195	2.786429e-53	6.673557e-51
MsaG005443	MsaG045222	0.822484	4.073416e-53	9.570144e-51
MsaG005444	MsaG045222	0.822960	3.160342e-53	7.521063e-51
MsaG005506	MsaG045222	0.817532	5.465681e-52	1.127139e-49
MsaG005508	MsaG045222	0.832939	1.285670e-55	4.051332e-53
MsaG005510	MsaG045222	0.808226	5.849987e-50	9.571892e-48
MsaG005582	MsaG045222	0.820646	1.078058e-52	2.411845e-50
MsaG005683	MsaG045222	0.861979	1.385748e-63	1.162092e-60
MsaG005642	MsaG045222	0.813372	4.559506e-51	8.460738e-49
MsaG005705	MsaG045222	0.821207	8.019391e-53	1.821008e-50
MsaG005838	MsaG045222	0.803043	7.078933e-49	1.025639e-46
MsaG005811	MsaG045222	0.856762	5.023337e-62	3.460155e-59
MsaG005864	MsaG045222	0.867561	2.519569e-65	2.639905e-62
MsaG006051	MsaG045222	0.841125	1.064583e-57	4.305669e-55
MsaG006175	MsaG045222	0.857002	4.270932e-62	2.967394e-59
MsaG006274	MsaG045222	0.801013	1.841482e-48	2.547400e-46
MsaG006561	MsaG045222	0.830339	5.584501e-55	1.631955e-52
MsaG006777	MsaG045222	0.808449	5.246315e-50	8.630247e-48
MsaG006902	MsaG045222	0.826641	4.322676e-54	1.137949e-51
MsaG006926	MsaG045222	0.826732	4.113485e-54	1.085650e-51
MsaG007145	MsaG045222	0.854309	2.586207e-61	1.630212e-58
MsaG007353	MsaG045222	0.828316	1.721099e-54	4.748524e-52
MsaG007387	MsaG045222	0.817455	5.689265e-52	1.170924e-49
MsaG007555	MsaG045222	0.812386	7.481984e-51	1.354661e-48
MsaG007716	MsaG045222	0.803352	6.113711e-49	8.921434e-47
MsaG007729	MsaG045222	0.828256	1.779606e-54	4.901473e-52
MsaG007833	MsaG045222	0.810320	2.090646e-50	3.598236e-48
MsaG008140	MsaG045222	0.817404	5.839726e-52	1.200330e-49
MsaG008461	MsaG045222	0.802107	1.101625e-48	1.562171e-46
MsaG008552	MsaG045222	0.806210	1.557006e-49	2.428412e-47
MsaG009138	MsaG045222	0.827664	2.465503e-54	6.678990e-52
MsaG009390	MsaG045222	0.838182	6.153447e-57	2.269524e-54
MsaG009501	MsaG045222	0.811670	1.069783e-50	1.902981e-48
MsaG009657	MsaG045222	0.806167	1.589109e-49	2.475890e-47
MsaG010053	MsaG045222	0.810274	2.138741e-50	3.676812e-48
MsaG010066	MsaG045222	0.849263	6.868139e-60	3.630045e-57
MsaG010394	MsaG045222	0.816388	9.848262e-52	1.972021e-49
MsaG010517	MsaG045222	0.855743	9.960659e-62	6.609882e-59
MsaG010533	MsaG045222	0.819115	2.403660e-52	5.164883e-50
MsaG010835	MsaG045222	0.812055	8.825473e-51	1.584822e-48
MsaG010894	MsaG045222	0.801591	1.404082e-48	1.967901e-46
MsaG011080	MsaG045222	0.812188	8.259769e-51	1.488122e-48
MsaG011275	MsaG045222	0.835950	2.273473e-56	7.835122e-54
MsaG011528	MsaG045222	0.816646	8.626280e-52	1.738724e-49
MsaG011806	MsaG045222	0.828482	1.569854e-54	4.351713e-52
MsaG012120	MsaG045222	0.805153	2.589072e-49	3.939175e-47
MsaG012263	MsaG045222	0.804617	3.345882e-49	5.027630e-47
MsaG012304	MsaG045222	0.823901	1.909086e-53	4.660522e-51
MsaG012380	MsaG045222	0.800241	2.642261e-48	3.591907e-46
MsaG012382	MsaG045222	0.820138	1.408005e-52	3.108138e-50
MsaG012422	MsaG045222	0.821736	6.059543e-53	1.395419e-50
MsaG041899	MsaG045222	0.825786	6.888098e-54	1.770764e-51
MsaG041900	MsaG045222	0.826595	4.431913e-54	1.165233e-51
MsaG041901	MsaG045222	0.832438	1.709637e-55	5.309071e-53
MsaG041902	MsaG045222	0.825555	7.812097e-54	1.995397e-51
MsaG041903	MsaG045222	0.823227	2.739886e-53	6.567588e-51
MsaG041904	MsaG045222	0.811556	1.132067e-50	2.008195e-48
MsaG043415	MsaG045222	0.830210	6.002191e-55	1.747565e-52
MsaG044336	MsaG045222	0.810351	2.058509e-50	3.545708e-48
MsaG044354	MsaG045222	0.807246	9.426774e-50	1.506574e-47
MsaG044384	MsaG045222	0.860759	3.252039e-63	2.602998e-60
MsaG044885	MsaG045222	0.806667	1.248244e-49	1.967909e-47
MsaG045021	MsaG045222	0.814999	2.001811e-51	3.869651e-49
MsaG045072	MsaG045222	0.837762	7.878795e-57	2.868600e-54
MsaG045222	MsaG045403	0.826564	4.508876e-54	1.184441e-51
MsaG045222	MsaG045445	0.819149	2.361869e-52	5.079541e-50
MsaG045222	MsaG045452	0.806369	1.441517e-49	2.256728e-47
MsaG045222	MsaG045487	0.828852	1.279448e-54	3.583335e-52
MsaG045222	MsaG045611	0.858686	1.358652e-62	1.005065e-59
MsaG045222	MsaG046053	0.856963	4.385529e-62	3.042848e-59
MsaG045222	MsaG046423	0.822134	4.905554e-53	1.141735e-50
MsaG045222	MsaG046367	0.803194	6.590689e-49	9.582452e-47
MsaG045222	MsaG046383	0.840570	1.486273e-57	5.906821e-55
MsaG045222	MsaG046556	0.855179	1.450822e-61	9.433526e-59
MsaG045222	MsaG046588	0.809424	3.252941e-50	5.478431e-48
MsaG045222	MsaG046770	0.801352	1.571145e-48	2.190141e-46
MsaG045222	MsaG046807	0.841572	8.127877e-58	3.334300e-55
MsaG045222	MsaG046808	0.817495	5.571250e-52	1.147838e-49
MsaG045222	MsaG046862	0.811446	1.196114e-50	2.116056e-48
MsaG045222	MsaG047004	0.804662	3.275075e-49	4.926309e-47
MsaG045222	MsaG047054	0.855561	1.124631e-61	7.414957e-59
MsaG045222	MsaG047055	0.802315	9.988781e-49	1.423302e-46
MsaG045222	MsaG004907	0.806781	1.181379e-49	1.867513e-47
MsaG045222	MsaG002437	0.838236	5.960582e-57	2.202019e-54
MsaG045222	MsaG000067	0.846936	2.994002e-59	1.462919e-56
MsaG045222	MsaG003742	0.836487	1.662947e-56	5.824565e-54
MsaG045222	MsaG008796	0.855146	1.483369e-61	9.633441e-59
MsaG045222	MsaG009037	0.858117	2.003807e-62	1.451124e-59
MsaG045222	MsaG009542	0.805366	2.336505e-49	3.572535e-47
MsaG045222	MsaG013401	0.817323	6.088565e-52	1.248881e-49
MsaG045222	MsaG014449	0.800706	2.125977e-48	2.920783e-46
MsaG045222	MsaG014180	0.857738	2.593944e-62	1.852377e-59
MsaG045222	MsaG011676	0.822458	4.129248e-53	9.694457e-51
MsaG045222	MsaG014275	0.816576	8.944067e-52	1.799602e-49
MsaG045222	MsaG012695	0.810039	2.401623e-50	4.105191e-48
MsaG045222	MsaG026431	0.811563	1.128447e-50	2.002097e-48
MsaG045222	MsaG029571	0.823120	2.900465e-53	6.932479e-51
MsaG045222	MsaG031950	0.804224	4.037488e-49	6.012043e-47
MsaG045222	MsaG032410	0.830632	4.738650e-55	1.396343e-52
MsaG045222	MsaG032931	0.821305	7.612475e-53	1.733103e-50
MsaG045222	MsaG032980	0.836022	2.180374e-56	7.530612e-54
MsaG045222	MsaG032243	0.841209	1.012223e-57	4.104683e-55
MsaG045222	MsaG032845	0.821248	7.846183e-53	1.783616e-50
MsaG045222	MsaG031747	0.802346	9.842186e-49	1.403428e-46
MsaG045222	MsaG033148	0.829727	7.862600e-55	2.257783e-52
MsaG045222	MsaG033325	0.858095	2.033804e-62	1.471735e-59
MsaG045222	MsaG034264	0.843104	3.205754e-58	1.381168e-55
MsaG045222	MsaG040848	0.808009	6.504291e-50	1.058727e-47
MsaG045222	MsaG036873	0.800082	2.845533e-48	3.854449e-46
MsaG045222	MsaG037271	0.817282	6.219183e-52	1.274353e-49
MsaG045222	MsaG038765	0.807519	8.255090e-50	1.328000e-47
MsaG045222	MsaG037384	0.836817	1.371743e-56	4.852657e-54
MsaG045222	MsaG037156	0.805408	2.290122e-49	3.504993e-47
MsaG045222	MsaG037161	0.824674	1.258630e-53	3.137965e-51
MsaG045222	MsaG040703	0.813558	4.151870e-51	7.740498e-49
MsaG045222	MsaG037786	0.801678	1.348447e-48	1.893647e-46
MsaG045222	MsaG036542	0.825077	1.012382e-53	2.552049e-51
MsaG045222	MsaG039226	0.823176	2.814618e-53	6.737505e-51
MsaG045222	MsaG039736	0.848455	1.148018e-59	5.902543e-57
MsaG045222	MsaG036984	0.817947	4.410197e-52	9.192764e-50
MsaG045222	MsaG039603	0.804631	3.323467e-49	4.995550e-47
MsaG045222	MsaG043490	0.815058	1.942849e-51	3.761128e-49
MsaG045222	MsaG045876	0.807725	7.468631e-50	1.207435e-47
MsaG045222	MsaG043458	0.801191	1.694549e-48	2.353546e-46
MsaG013325	MsaG045222	0.807828	7.102152e-50	1.151033e-47
MsaG013621	MsaG045222	0.819262	2.226038e-52	4.801727e-50
MsaG013644	MsaG045222	0.819110	2.410094e-52	5.178009e-50
MsaG013909	MsaG045222	0.805944	1.769620e-49	2.742605e-47
MsaG013993	MsaG045222	0.805910	1.799087e-49	2.786004e-47
MsaG014184	MsaG045222	0.820680	1.058989e-52	2.371220e-50
MsaG014810	MsaG045222	0.823281	2.661689e-53	6.389809e-51
MsaG014927	MsaG045222	0.818765	2.885033e-52	6.142289e-50
MsaG015176	MsaG045222	0.820380	1.239525e-52	2.753795e-50
MsaG015216	MsaG045222	0.832262	1.889642e-55	5.838095e-53
MsaG015202	MsaG045222	0.850261	3.624430e-60	1.981829e-57
MsaG015269	MsaG045222	0.818355	3.570790e-52	7.521479e-50
MsaG015978	MsaG045222	0.823151	2.853356e-53	6.825457e-51
MsaG016149	MsaG045222	0.801064	1.798160e-48	2.490255e-46
MsaG016685	MsaG045222	0.811254	1.316065e-50	2.317326e-48
MsaG017058	MsaG045222	0.875378	6.697309e-68	9.792414e-65
MsaG017110	MsaG045222	0.815510	1.542989e-51	3.021439e-49
MsaG017173	MsaG045222	0.829049	1.147066e-54	3.230594e-52
MsaG017209	MsaG045222	0.830621	4.769580e-55	1.404991e-52
MsaG017251	MsaG045222	0.801994	1.162072e-48	1.643670e-46
MsaG017691	MsaG045222	0.804459	3.609220e-49	5.403430e-47
MsaG017820	MsaG045222	0.831087	3.670397e-55	1.095839e-52
MsaG018248	MsaG045222	0.877365	1.392210e-68	2.225779e-65
MsaG018372	MsaG045222	0.850208	3.751363e-60	2.047482e-57
MsaG018813	MsaG045222	0.843478	2.551560e-58	1.112586e-55
MsaG018773	MsaG045222	0.816208	1.080108e-51	2.152929e-49
MsaG019410	MsaG045222	0.805936	1.776598e-49	2.752885e-47
MsaG019420	MsaG045222	0.808373	5.443765e-50	8.938804e-48
MsaG019639	MsaG045222	0.819616	1.850372e-52	4.028257e-50
MsaG019731	MsaG045222	0.830359	5.523007e-55	1.614888e-52
MsaG020228	MsaG045222	0.819112	2.407849e-52	5.173382e-50
MsaG020290	MsaG045222	0.846731	3.403419e-59	1.651772e-56
MsaG020580	MsaG045222	0.835616	2.760839e-56	9.419966e-54
MsaG020843	MsaG045222	0.800267	2.609711e-48	3.549812e-46
MsaG020874	MsaG045222	0.835582	2.814886e-56	9.594463e-54
MsaG020875	MsaG045222	0.826972	3.606217e-54	9.581472e-52
MsaG021201	MsaG045222	0.801191	1.694405e-48	2.353354e-46
MsaG021668	MsaG045222	0.815083	1.917751e-51	3.714914e-49
MsaG021863	MsaG045222	0.833357	1.013392e-55	3.232691e-53
MsaG021896	MsaG045222	0.803149	6.732090e-49	9.777695e-47
MsaG023743	MsaG045222	0.814396	2.718996e-51	5.176758e-49
MsaG023884	MsaG045222	0.832977	1.258435e-55	3.969845e-53
MsaG023971	MsaG045222	0.824961	1.077963e-53	2.708750e-51
MsaG025148	MsaG045222	0.809521	3.101315e-50	5.235410e-48
MsaG025484	MsaG045222	0.837750	7.933792e-57	2.887552e-54
MsaG025691	MsaG045222	0.813730	3.807860e-51	7.129608e-49
MsaG026721	MsaG045222	0.847723	1.824673e-59	9.155079e-57
MsaG026714	MsaG045222	0.824724	1.225188e-53	3.058719e-51
MsaG026970	MsaG045222	0.818667	3.035323e-52	6.445748e-50
MsaG027039	MsaG045222	0.835295	3.324315e-56	1.123388e-53
MsaG027361	MsaG045222	0.822440	4.168769e-53	9.782541e-51
MsaG027340	MsaG045222	0.801867	1.233396e-48	1.739596e-46
MsaG027568	MsaG045222	0.814682	2.351498e-51	4.509298e-49
MsaG027766	MsaG045222	0.808726	4.581710e-50	7.587790e-48
MsaG027800	MsaG045222	0.816166	1.103840e-51	2.197857e-49
MsaG027780	MsaG045222	0.805090	2.667609e-49	4.052763e-47
MsaG028001	MsaG045222	0.841122	1.066223e-57	4.311981e-55
MsaG028034	MsaG045222	0.811516	1.154810e-50	2.046497e-48
MsaG028069	MsaG045222	0.838038	6.699010e-57	2.459763e-54
MsaG028257	MsaG045222	0.808841	4.330670e-50	7.191846e-48
MsaG028374	MsaG045222	0.801620	1.385540e-48	1.943177e-46
MsaG028351	MsaG045222	0.800627	2.206066e-48	3.025371e-46
MsaG028442	MsaG045222	0.808474	5.182477e-50	8.530556e-48
MsaG028456	MsaG045222	0.806205	1.560570e-49	2.433704e-47
MsaG028457	MsaG045222	0.815197	1.809871e-51	3.516171e-49
MsaG028485	MsaG045222	0.823539	2.317418e-53	5.602233e-51
MsaG028501	MsaG045222	0.836293	1.862846e-56	6.486779e-54
MsaG028503	MsaG045222	0.820965	9.112716e-53	2.056112e-50
MsaG028554	MsaG045222	0.850106	4.004552e-60	2.177942e-57
MsaG028715	MsaG045222	0.801523	1.449772e-48	2.028807e-46
MsaG028716	MsaG045222	0.849083	7.702045e-60	4.046021e-57
MsaG028811	MsaG045222	0.829803	7.536360e-55	2.168772e-52
MsaG028979	MsaG045222	0.807366	8.893971e-50	1.425513e-47
MsaG028929	MsaG045222	0.809950	2.509955e-50	4.281093e-48
MsaG029320	MsaG045222	0.805282	2.433590e-49	3.713579e-47
MsaG029324	MsaG045222	0.805426	2.270551e-49	3.476450e-47
MsaG029335	MsaG045222	0.812326	7.710297e-51	1.393882e-48
MsaG029593	MsaG045222	0.855015	1.619182e-61	1.046569e-58
MsaG029899	MsaG045222	0.804170	4.141542e-49	6.159249e-47
MsaG029948	MsaG045222	0.810641	1.783675e-50	3.093998e-48
MsaG030084	MsaG045222	0.824605	1.306342e-53	3.250798e-51
MsaG030332	MsaG045222	0.807219	9.552505e-50	1.525698e-47
MsaG030471	MsaG045222	0.835171	3.571579e-56	1.202454e-53
MsaG030501	MsaG045222	0.811566	1.126864e-50	1.999418e-48
MsaG030507	MsaG045222	0.850514	3.081943e-60	1.700075e-57
MsaG030801	MsaG045222	0.804908	2.911002e-49	4.403896e-47
MsaG031427	MsaG045222	0.815334	1.688139e-51	3.291022e-49
MsaG031735	MsaG045222	0.811190	1.358641e-50	2.388556e-48
MsaG032062	MsaG045222	0.806427	1.402014e-49	2.197931e-47
MsaG032068	MsaG045222	0.852711	7.406462e-61	4.410987e-58
MsaG033249	MsaG045222	0.812183	8.278391e-51	1.491325e-48
MsaG033481	MsaG045222	0.822748	3.538853e-53	8.373700e-51
MsaG033693	MsaG045222	0.817616	5.233860e-52	1.081639e-49
MsaG033831	MsaG045222	0.831797	2.458879e-55	7.495395e-53
MsaG034079	MsaG045222	0.811620	1.096548e-50	1.948230e-48
MsaG034172	MsaG045222	0.809871	2.609727e-50	4.442731e-48
MsaG034259	MsaG045222	0.819365	2.110412e-52	4.564552e-50
MsaG034415	MsaG045222	0.819940	1.562191e-52	3.430310e-50
MsaG034827	MsaG045222	0.851180	2.004099e-60	1.131296e-57
MsaG034828	MsaG045222	0.847494	2.107378e-59	1.049240e-56
MsaG034829	MsaG045222	0.854529	2.235299e-61	1.420084e-58
MsaG036047	MsaG045222	0.815095	1.906562e-51	3.694326e-49
MsaG036332	MsaG045222	0.820101	1.435551e-52	3.165841e-50
MsaG038016	MsaG045222	0.871761	1.093274e-66	1.365396e-63
MsaG038421	MsaG045222	0.820659	1.070325e-52	2.395385e-50
MsaG039196	MsaG045222	0.800845	1.992799e-48	2.746250e-46
MsaG039206	MsaG045222	0.804127	4.227554e-49	6.280908e-47
MsaG039621	MsaG045222	0.839104	3.564012e-57	1.352833e-54
MsaG040187	MsaG045222	0.816018	1.190606e-51	2.361637e-49
MsaG040669	MsaG045222	0.808602	4.867985e-50	8.037429e-48
MsaG041071	MsaG045222	0.803050	7.055831e-49	1.022461e-46
MsaG041116	MsaG045222	0.805447	2.248355e-49	3.444173e-47
MsaG041271	MsaG045222	0.807330	9.049935e-50	1.449285e-47
MsaG041300	MsaG045222	0.842260	5.359195e-58	2.247123e-55
MsaG041336	MsaG045222	0.806491	1.359383e-49	2.134262e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG045222	MtrunA17_Chr1g0203051	52.514	179	75	2	1	177	1	171	6.25e-51	182
MsaG045222	MtrunA17_Chr1g0203051	50.667	75	37	0	177	251	547	621	1.70e-16	82.0
MsaG045222	MtrunA17_Chr8g0389811	47.863	117	59	1	61	175	58	174	3.78e-34	127
MsaG045222	MtrunA17_Chr2g0331371	42.105	114	64	1	68	179	36	149	1.31e-23	98.2
MsaG045222	MtrunA17_Chr6g0473421	37.984	129	73	3	35	160	6	130	2.01e-23	95.9
MsaG045222	MtrunA17_Chr1g0171741	34.503	171	103	5	11	177	59	224	2.11e-20	90.5
MsaG045222	MtrunA17_Chr1g0172931	41.818	110	62	1	60	167	49	158	1.83e-19	85.1
MsaG045222	MtrunA17_Chr2g0308841	42.529	87	50	0	177	263	140	226	5.42e-15	74.7
MsaG045222	MtrunA17_Chr2g0287651	36.364	110	68	1	70	177	58	167	8.03e-14	73.9
MsaG045222	MtrunA17_Chr7g0228051	50.000	68	31	1	32	96	18	85	1.82e-11	60.1
MsaG045222	MtrunA17_Chr1g0203721	29.218	243	137	11	49	266	393	625	8.78e-11	64.3
MsaG045222	MtrunA17_Chr5g0448511	26.562	192	137	2	192	379	325	516	9.24e-11	63.9

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG045222	AT2G27110.2	35.000	100	56	2	185	278	503	599	2.87e-11	66.2
MsaG045222	AT2G27110.1	35.000	100	56	2	185	278	503	599	2.87e-11	66.2
MsaG045222	AT2G27110.3	35.000	100	56	2	185	278	358	454	3.23e-11	65.9

Find 92 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
ATTTAAATGTCAACCGTTCT+TGG	0.283454	8:-70190292	None:intergenic
CAACTAAACGATCCTGAAAA+TGG	0.285819	8:-70188794	None:intergenic
CCTCTGAACCTTCCGCATTA+AGG	0.302211	8:-70188472	None:intergenic
CGTTCCATCACAAGACATTC+TGG	0.328402	8:-70190398	None:intergenic
GCTTAATGATTCCAATGTTT+CGG	0.343715	8:-70190606	None:intergenic
TGCAAAAGATTCGAGACATT+TGG	0.377751	8:+70190320	MsaT045222.1:CDS
GATTCCATCTTTAGCACGTT+TGG	0.386420	8:-70190426	None:intergenic
GACATTTACAGTTCGTTGTA+TGG	0.387972	8:+70188678	MsaT045222.1:CDS
CATCCACATATGCCACATTT+CGG	0.392359	8:-70190770	None:intergenic
TTTGTCATAGAGAAGGTTAC+AGG	0.397074	8:+70188919	MsaT045222.1:CDS
AGGGTATTTGAAAACATTGT+AGG	0.400513	8:-70190237	None:intergenic
TATACACAAAACCATGGAAA+TGG	0.430787	8:+70190571	MsaT045222.1:CDS
ATGATGAAGACTCGGAAGAT+TGG	0.445167	8:+70190879	MsaT045222.1:CDS
AAAGCCGTGTTGTTAAGAAC+AGG	0.447436	8:+70188868	MsaT045222.1:CDS
TAAGCAGTTTAGGCCCGTAT+TGG	0.451250	8:+70190160	MsaT045222.1:intron
ACCAGTTATGTCGCTTACAT+TGG	0.451744	8:-70188441	None:intergenic
GATGTTCGCAACTGATGAAC+CGG	0.455923	8:+70191087	MsaT045222.1:CDS
ACCCTAGGGATGATATTCAT+TGG	0.456636	8:+70190255	MsaT045222.1:CDS
CCCAATGTAAGCGACATAAC+TGG	0.464104	8:+70188440	MsaT045222.1:CDS
CCAGTTATGTCGCTTACATT+GGG	0.465368	8:-70188440	None:intergenic
TCACATATCAATGATGATCA+AGG	0.468748	8:+70190854	MsaT045222.1:CDS
TCTTCATCTCGTAATGTAAG+TGG	0.469724	8:+70190728	MsaT045222.1:CDS
GAGAGCAGAAGGCAACTAGT+AGG	0.491224	8:+70188970	MsaT045222.1:CDS
AACTAGTAGGTGTGGTTGCA+TGG	0.492607	8:+70188983	MsaT045222.1:CDS
AAACATTGGAATCATTAAGC+AGG	0.500216	8:+70190609	MsaT045222.1:CDS
ACATTTACAGTTCGTTGTAT+GGG	0.501983	8:+70188679	MsaT045222.1:CDS
CATAGAGAAGGTTACAGGGT+TGG	0.507010	8:+70188924	MsaT045222.1:CDS
CCGACTAGATCTCTCCAATA+CGG	0.511443	8:-70190174	None:intergenic
CATGGACAATAGCTATTGTT+CGG	0.512713	8:+70188620	MsaT045222.1:CDS
CCTTAAAATTAATTCTGTCA+AGG	0.525060	8:-70188743	None:intergenic
TGGACCAAACGTGCTAAAGA+TGG	0.531683	8:+70190422	MsaT045222.1:CDS
TGCGGAAGGTTCAGAGGTAG+AGG	0.537083	8:+70188478	MsaT045222.1:CDS
GCAACTGATGAACCGGAGAA+TGG	0.538478	8:+70191094	MsaT045222.1:CDS
ACCTTTGTTTGTCATAGAGA+AGG	0.542041	8:+70188912	MsaT045222.1:CDS
AAGCGGAGTTCGCCGAAATG+TGG	0.543560	8:+70190758	MsaT045222.1:CDS
TCGCCGAAATGTGGCATATG+TGG	0.547405	8:+70190767	MsaT045222.1:CDS
GTGCAACTTTGACGATGAAA+CGG	0.547511	8:+70188701	MsaT045222.1:CDS
TCCACACTTCAACACGGCAT+TGG	0.549156	8:-70190537	None:intergenic
TCTGTCACTGAACCGACCAC+GGG	0.550131	8:-70190650	None:intergenic
ATGTGGCATATGTGGATGTA+AGG	0.551576	8:+70190775	MsaT045222.1:CDS
TTCTGTCACTGAACCGACCA+CGG	0.554234	8:-70190651	None:intergenic
CGATAGGAAAAGAGAGCAGA+AGG	0.554726	8:+70188959	MsaT045222.1:CDS
AATTTGTACGGTTGTGTACG+TGG	0.562187	8:+70188831	MsaT045222.1:CDS
CTTCGTAGGCGACAAGGCTG+CGG	0.566588	8:-70190804	None:intergenic
AACATTGGAATCATTAAGCA+GGG	0.567060	8:+70190610	MsaT045222.1:CDS
CCGCAACGGCTTAAGAAAAG+AGG	0.575682	8:+70190689	MsaT045222.1:CDS
CAACGGCTTAAGAAAAGAGG+TGG	0.576611	8:+70190692	MsaT045222.1:CDS
ATCCAATGAATATCATCCCT+AGG	0.577004	8:-70190257	None:intergenic
ACATACGTAGTTACAAATGC+AGG	0.577104	8:-70190485	None:intergenic
GGAGAGTGATGTATGTTCCT+CGG	0.577170	8:+70188641	MsaT045222.1:CDS
TGAAACGGCGGTTGATTGCA+TGG	0.577332	8:+70188716	MsaT045222.1:CDS
GGTCATCATACACCATTCTC+CGG	0.578756	8:-70191106	None:intergenic
CGACTAGATCTCTCCAATAC+GGG	0.579381	8:-70190173	None:intergenic
TCCAATGAATATCATCCCTA+GGG	0.582068	8:-70190256	None:intergenic
CACATATCAATGATGATCAA+GGG	0.585150	8:+70190855	MsaT045222.1:CDS
CAGAAGGCAACTAGTAGGTG+TGG	0.587238	8:+70188975	MsaT045222.1:CDS
GTACACGTTGACGCTGGTAG+CGG	0.591900	8:+70189017	MsaT045222.1:CDS
TTGACGCTGGTAGCGGTCGA+TGG	0.592302	8:+70189024	MsaT045222.1:CDS
TAAATATATACACAAAACCA+TGG	0.595738	8:+70190565	MsaT045222.1:CDS
CCTTAATGCGGAAGGTTCAG+AGG	0.595778	8:+70188472	MsaT045222.1:CDS
CGTGTTGTTAAGAACAGGGA+TGG	0.599865	8:+70188873	MsaT045222.1:CDS
TTGTCATAGAGAAGGTTACA+GGG	0.601328	8:+70188920	MsaT045222.1:CDS
GTTGATGAATTGCCCGTGGT+CGG	0.602393	8:+70190638	MsaT045222.1:CDS
CATCCCTGTTCTTAACAACA+CGG	0.608258	8:-70188872	None:intergenic
GCCAATGCCGTGTTGAAGTG+TGG	0.608683	8:+70190536	MsaT045222.1:CDS
TAAAGTCTTCGTAGGCGACA+AGG	0.612256	8:-70190810	None:intergenic
GGATGCAACCTTAATGCGGA+AGG	0.614546	8:+70188464	MsaT045222.1:CDS
AAAGTTTAGGTAATCCGCAA+CGG	0.615547	8:+70190675	MsaT045222.1:CDS
TCTAGTCGGTGCAAAGTCGA+AGG	0.615809	8:+70190188	MsaT045222.1:CDS
ACCTTCTCTATGACAAACAA+AGG	0.615884	8:-70188913	None:intergenic
CGTTGAGCGATGTAAGAGGA+TGG	0.618826	8:+70190514	MsaT045222.1:CDS
TGTTCGTTGAGCGATGTAAG+AGG	0.622081	8:+70190510	MsaT045222.1:CDS
ATGTACATTAAAGTCTTCGT+AGG	0.624035	8:-70190818	None:intergenic
TTGGAAGTAATGCTGCCGAT+AGG	0.626637	8:+70188943	MsaT045222.1:CDS
TAGTTACAAATGCAGGATCA+CGG	0.636049	8:-70190478	None:intergenic
GTCTTCGACATCTTCATCCG+AGG	0.643998	8:-70188658	None:intergenic
AATGTAAGCGACATAACTGG+TGG	0.647899	8:+70188443	MsaT045222.1:CDS
GGAAGATTGGAACACACCCA+TGG	0.654797	8:+70190892	MsaT045222.1:CDS
TCAAGGGTATGATGAAGACT+CGG	0.658393	8:+70190871	MsaT045222.1:CDS
AGGATCTCCACACTTCAACA+CGG	0.660448	8:-70190543	None:intergenic
ATTCAAGTACACGTTGACGC+TGG	0.666323	8:+70189011	MsaT045222.1:CDS
ACTGCCAGAATGTCTTGTGA+TGG	0.666806	8:+70190394	MsaT045222.1:CDS
TGGTGGATGCAACCTTAATG+CGG	0.674046	8:+70188460	MsaT045222.1:CDS
AAGCCGTGTTGTTAAGAACA+GGG	0.681295	8:+70188869	MsaT045222.1:CDS
GTCGAAGGTGATGTGCGCAG+TGG	0.682048	8:+70190203	MsaT045222.1:CDS
ACATGTAAGATATGTTCACA+AGG	0.686637	8:-70190347	None:intergenic
CCGTATTGGAGAGATCTAGT+CGG	0.690217	8:+70190174	MsaT045222.1:CDS
TGAAGTTGATGAATTGCCCG+TGG	0.692394	8:+70190634	MsaT045222.1:CDS
CAACTTTGACGATGAAACGG+CGG	0.704083	8:+70188704	MsaT045222.1:CDS
AATGTCTTGTGATGGAACGA+TGG	0.705741	8:+70190402	MsaT045222.1:CDS
ACATTGGAATCATTAAGCAG+GGG	0.706809	8:+70190611	MsaT045222.1:CDS
TAGGGTCGGATGAAATCATG+CGG	0.716997	8:+70188769	MsaT045222.1:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content

Chromosome	Type	Strat	End	Strand	Name
Chr8	gene	70188404	70191123	70188404	ID=MsaG045222
Chr8	mRNA	70188404	70191123	70188404	ID=MsaT045222.1;Parent=MsaG045222
Chr8	exon	70188404	70188499	70188404	ID=MsaT045222.1.exon1;Parent=MsaT045222.1
Chr8	CDS	70188404	70188499	70188404	ID=cds.MsaT045222.1;Parent=MsaT045222.1
Chr8	exon	70188618	70189045	70188618	ID=MsaT045222.1.exon2;Parent=MsaT045222.1
Chr8	CDS	70188618	70189045	70188618	ID=cds.MsaT045222.1;Parent=MsaT045222.1
Chr8	exon	70190172	70190913	70190172	ID=MsaT045222.1.exon3;Parent=MsaT045222.1
Chr8	CDS	70190172	70190913	70190172	ID=cds.MsaT045222.1;Parent=MsaT045222.1
Chr8	exon	70191070	70191123	70191070	ID=MsaT045222.1.exon4;Parent=MsaT045222.1
Chr8	CDS	70191070	70191123	70191070	ID=cds.MsaT045222.1;Parent=MsaT045222.1

Gene Sequence

>MsaT045222.1

ATGGATATTCATGAAATTCTAGAAGTTTTCGGAATTCCCAATGTAAGCGACATAACTGGTGGATGCAACCTTAATGCGGAAGGTTCAGAGGTAGAGGACATGGACAATAGCTATTGTTCGGAGAGTGATGTATGTTCCTCGGATGAAGATGTCGAAGACATTTACAGTTCGTTGTATGGGTGCAACTTTGACGATGAAACGGCGGTTGATTGCATGGCTGACCTTGACAGAATTAATTTTAAGGAAATAGGGTCGGATGAAATCATGCGGTACCATTTTCAGGATCGTTTAGTTGCATTCAAGTTTTACAATTTGTACGGTTGTGTACGTGGATTTTCCGGTAGAAAAAGCCGTGTTGTTAAGAACAGGGATGGCGATGTTGTTCAACAAACCTTTGTTTGTCATAGAGAAGGTTACAGGGTTGGAAGTAATGCTGCCGATAGGAAAAGAGAGCAGAAGGCAACTAGTAGGTGTGGTTGCATGGCAAAAATTCAAGTACACGTTGACGCTGGTAGCGGTCGATGGCCCGTATTGGAGAGATCTAGTCGGTGCAAAGTCGAAGGTGATGTGCGCAGTGGTTCCATTTTTACCTACAATGTTTTCAAATACCCTAGGGATGATATTCATTGGATCGTGACATTTTGCCAAGAACGGTTGACATTTAAATGTTCATGCAAAAGATTCGAGACATTTGGTATTCCTTGTGAACATATCTTACATGTTCTAGTGCATTTGAACATTGTTGTACTGCCAGAATGTCTTGTGATGGAACGATGGACCAAACGTGCTAAAGATGGAATCAATGCTCAAAATGCTAATAGTTCAAGTCACCGTGATCCTGCATTTGTAACTACGTATGTGATGTTCGTTGAGCGATGTAAGAGGATGGCCAATGCCGTGTTGAAGTGTGGAGATCCTAAATATATACACAAAACCATGGAAATGGTTGAAAAACACACCGAAACATTGGAATCATTAAGCAGGGGTGAAGTTGATGAATTGCCCGTGGTCGGTTCAGTGACAGAAAAAAGTTTAGGTAATCCGCAACGGCTTAAGAAAAGAGGTGGAGCAGCAGCTGCGTCTTCATCTCGTAATGTAAGTGGAAATAAAAAGCGGAGTTCGCCGAAATGTGGCATATGTGGATGTAAGGTCACAACCGCAGCCTTGTCGCCTACGAAGACTTTAATGTACATACGTAATCATTCATCACATATCAATGATGATCAAGGGTATGATGAAGACTCGGAAGATTGGAACACACCCATGTTTGATGTTGCGTTGAAGATGTTCGCAACTGATGAACCGGAGAATGGTGTATGA

Protein sequence

>MsaT045222.1

MDIHEILEVFGIPNVSDITGGCNLNAEGSEVEDMDNSYCSESDVCSSDEDVEDIYSSLYGCNFDDETAVDCMADLDRINFKEIGSDEIMRYHFQDRLVAFKFYNLYGCVRGFSGRKSRVVKNRDGDVVQQTFVCHREGYRVGSNAADRKREQKATSRCGCMAKIQVHVDAGSGRWPVLERSSRCKVEGDVRSGSIFTYNVFKYPRDDIHWIVTFCQERLTFKCSCKRFETFGIPCEHILHVLVHLNIVVLPECLVMERWTKRAKDGINAQNANSSSHRDPAFVTTYVMFVERCKRMANAVLKCGDPKYIHKTMEMVEKHTETLESLSRGEVDELPVVGSVTEKSLGNPQRLKKRGGAAAASSSRNVSGNKKRSSPKCGICGCKVTTAALSPTKTLMYIRNHSSHINDDQGYDEDSEDWNTPMFDVALKMFATDEPENGV*