Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG045294 | XP_024637615.1 | 95.752 | 306 | 10 | 3 | 1 | 304 | 12 | 316 | 0.0 | 581 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG045294 | sp|Q9FME3|TCP5_ARATH | 80.682 | 88 | 16 | 1 | 39 | 125 | 45 | 132 | 5.37e-45 | 159 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG045294 | tr|A0A396IG22|A0A396IG22_MEDTR | 95.752 | 306 | 10 | 3 | 1 | 304 | 2 | 306 | 0.0 | 581 |
Gene ID | Type | Classification |
---|---|---|
MsaG045294 | TF | TCP |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsaG000083 | MsaG045294 | 0.811484 | 1.173270e-50 | 2.077638e-48 |
MsaG000863 | MsaG045294 | 0.866212 | 6.747536e-65 | 6.692407e-62 |
MsaG002291 | MsaG045294 | 0.824826 | 1.159629e-53 | 2.903178e-51 |
MsaG003000 | MsaG045294 | 0.831665 | 2.649657e-55 | 8.045851e-53 |
MsaG003690 | MsaG045294 | 0.800641 | 2.191718e-48 | 3.006661e-46 |
MsaG004154 | MsaG045294 | 0.805348 | 2.357747e-49 | 3.603516e-47 |
MsaG004189 | MsaG045294 | 0.812023 | 8.968370e-51 | 1.609253e-48 |
MsaG004689 | MsaG045294 | 0.837943 | 7.083669e-57 | 2.593435e-54 |
MsaG005847 | MsaG045294 | 0.810328 | 2.082435e-50 | 3.584819e-48 |
MsaG006199 | MsaG045294 | 0.806476 | 1.368976e-49 | 2.148647e-47 |
MsaG006256 | MsaG045294 | 0.800917 | 1.926955e-48 | 2.659762e-46 |
MsaG006871 | MsaG045294 | 0.828152 | 1.884555e-54 | 5.175618e-52 |
MsaG009185 | MsaG045294 | 0.802502 | 9.141275e-49 | 1.308132e-46 |
MsaG009506 | MsaG045294 | 0.851256 | 1.907990e-60 | 1.079861e-57 |
MsaG009532 | MsaG045294 | 0.810362 | 2.047306e-50 | 3.527349e-48 |
MsaG009762 | MsaG045294 | 0.831732 | 2.550883e-55 | 7.761229e-53 |
MsaG010331 | MsaG045294 | 0.839703 | 2.496499e-57 | 9.655350e-55 |
MsaG010573 | MsaG045294 | 0.803440 | 5.863016e-49 | 8.572992e-47 |
MsaG010968 | MsaG045294 | 0.833794 | 7.892194e-56 | 2.550100e-53 |
MsaG011202 | MsaG045294 | 0.804616 | 3.347755e-49 | 5.030277e-47 |
MsaG011413 | MsaG045294 | 0.812285 | 7.866661e-51 | 1.420707e-48 |
MsaG042799 | MsaG045294 | 0.836480 | 1.670170e-56 | 5.848599e-54 |
MsaG043286 | MsaG045294 | 0.847266 | 2.433423e-59 | 1.202286e-56 |
MsaG044312 | MsaG045294 | 0.800840 | 1.997627e-48 | 2.752572e-46 |
MsaG044313 | MsaG045294 | 0.804533 | 3.484063e-49 | 5.225094e-47 |
MsaG044703 | MsaG045294 | 0.834661 | 4.793829e-56 | 1.589650e-53 |
MsaG044946 | MsaG045294 | 0.818792 | 2.844952e-52 | 6.061201e-50 |
MsaG045121 | MsaG045294 | 0.841078 | 1.094998e-57 | 4.422203e-55 |
MsaG045122 | MsaG045294 | 0.810675 | 1.754085e-50 | 3.045140e-48 |
MsaG045152 | MsaG045294 | 0.815096 | 1.905596e-51 | 3.692559e-49 |
MsaG045294 | MsaG045295 | 0.941090 | 2.252669e-100 | 2.322469e-95 |
MsaG045294 | MsaG045314 | 0.927350 | 3.558107e-91 | 1.173427e-86 |
MsaG045294 | MsaG045333 | 0.831541 | 2.841477e-55 | 8.596543e-53 |
MsaG045294 | MsaG045348 | 0.830281 | 5.768187e-55 | 1.682856e-52 |
MsaG045294 | MsaG045708 | 0.800878 | 1.962409e-48 | 2.706348e-46 |
MsaG045294 | MsaG046128 | 0.803967 | 4.562595e-49 | 6.753535e-47 |
MsaG045294 | MsaG046281 | 0.802695 | 8.346464e-49 | 1.199654e-46 |
MsaG045294 | MsaG002656 | 0.813992 | 3.335790e-51 | 6.286957e-49 |
MsaG045294 | MsaG003231 | 0.820440 | 1.201302e-52 | 2.673129e-50 |
MsaG045294 | MsaG000658 | 0.808129 | 6.133863e-50 | 1.001302e-47 |
MsaG045294 | MsaG011165 | 0.801155 | 1.723018e-48 | 2.391157e-46 |
MsaG045294 | MsaG012727 | 0.824903 | 1.111901e-53 | 2.789681e-51 |
MsaG045294 | MsaG016310 | 0.802297 | 1.007444e-48 | 1.434892e-46 |
MsaG045294 | MsaG011618 | 0.807358 | 8.929226e-50 | 1.430898e-47 |
MsaG045294 | MsaG020224 | 0.804489 | 3.557305e-49 | 5.329438e-47 |
MsaG045294 | MsaG018616 | 0.829693 | 8.013179e-55 | 2.298772e-52 |
MsaG045294 | MsaG020214 | 0.817569 | 5.362958e-52 | 1.106999e-49 |
MsaG045294 | MsaG020276 | 0.875181 | 7.815097e-68 | 1.132890e-64 |
MsaG045294 | MsaG026838 | 0.806295 | 1.493857e-49 | 2.334649e-47 |
MsaG045294 | MsaG027357 | 0.802077 | 1.117093e-48 | 1.583097e-46 |
MsaG045294 | MsaG033152 | 0.819372 | 2.102474e-52 | 4.548246e-50 |
MsaG045294 | MsaG039944 | 0.819476 | 1.991588e-52 | 4.319976e-50 |
MsaG045294 | MsaG045464 | 0.841705 | 7.501528e-58 | 3.090215e-55 |
MsaG045294 | MsaG042480 | 0.800715 | 2.117771e-48 | 2.910019e-46 |
MsaG012692 | MsaG045294 | 0.800010 | 2.942569e-48 | 3.979539e-46 |
MsaG012951 | MsaG045294 | 0.802751 | 8.126177e-49 | 1.169487e-46 |
MsaG013182 | MsaG045294 | 0.817236 | 6.367365e-52 | 1.303180e-49 |
MsaG013327 | MsaG045294 | 0.803214 | 6.525863e-49 | 9.492695e-47 |
MsaG014295 | MsaG045294 | 0.816585 | 8.901361e-52 | 1.791422e-49 |
MsaG015799 | MsaG045294 | 0.814581 | 2.475642e-51 | 4.735123e-49 |
MsaG015757 | MsaG045294 | 0.824946 | 1.086326e-53 | 2.728673e-51 |
MsaG015769 | MsaG045294 | 0.837845 | 7.503078e-57 | 2.738716e-54 |
MsaG015930 | MsaG045294 | 0.804328 | 3.842016e-49 | 5.734732e-47 |
MsaG016239 | MsaG045294 | 0.810026 | 2.417452e-50 | 4.130885e-48 |
MsaG016250 | MsaG045294 | 0.801282 | 1.623452e-48 | 2.259447e-46 |
MsaG016504 | MsaG045294 | 0.813652 | 3.959647e-51 | 7.399294e-49 |
MsaG017281 | MsaG045294 | 0.833648 | 8.580870e-56 | 2.760870e-53 |
MsaG017573 | MsaG045294 | 0.810463 | 1.948262e-50 | 3.364902e-48 |
MsaG018355 | MsaG045294 | 0.840637 | 1.427035e-57 | 5.683332e-55 |
MsaG018446 | MsaG045294 | 0.811382 | 1.234364e-50 | 2.180363e-48 |
MsaG018624 | MsaG045294 | 0.843834 | 2.050591e-58 | 9.043436e-56 |
MsaG020221 | MsaG045294 | 0.834158 | 6.404429e-56 | 2.091817e-53 |
MsaG020641 | MsaG045294 | 0.801692 | 1.339473e-48 | 1.881653e-46 |
MsaG021312 | MsaG045294 | 0.801362 | 1.564218e-48 | 2.180939e-46 |
MsaG021484 | MsaG045294 | 0.801092 | 1.774888e-48 | 2.459582e-46 |
MsaG021781 | MsaG045294 | 0.809670 | 2.881592e-50 | 4.881824e-48 |
MsaG021836 | MsaG045294 | 0.813424 | 4.442690e-51 | 8.254847e-49 |
MsaG022048 | MsaG045294 | 0.808183 | 5.973789e-50 | 9.764424e-48 |
MsaG022074 | MsaG045294 | 0.828375 | 1.666352e-54 | 4.605284e-52 |
MsaG022388 | MsaG045294 | 0.838753 | 4.388942e-57 | 1.647857e-54 |
MsaG022454 | MsaG045294 | 0.813317 | 4.686924e-51 | 8.685155e-49 |
MsaG022609 | MsaG045294 | 0.819947 | 1.555736e-52 | 3.416871e-50 |
MsaG022673 | MsaG045294 | 0.802375 | 9.709765e-49 | 1.385440e-46 |
MsaG022981 | MsaG045294 | 0.813055 | 5.347624e-51 | 9.845151e-49 |
MsaG023246 | MsaG045294 | 0.801184 | 1.699850e-48 | 2.360558e-46 |
MsaG023230 | MsaG045294 | 0.807263 | 9.348619e-50 | 1.494692e-47 |
MsaG023351 | MsaG045294 | 0.800197 | 2.697154e-48 | 3.662853e-46 |
MsaG023728 | MsaG045294 | 0.805356 | 2.348080e-49 | 3.589413e-47 |
MsaG023849 | MsaG045294 | 0.800652 | 2.181117e-48 | 2.992821e-46 |
MsaG025367 | MsaG045294 | 0.815424 | 1.612601e-51 | 3.150928e-49 |
MsaG025776 | MsaG045294 | 0.811260 | 1.312049e-50 | 2.310635e-48 |
MsaG026252 | MsaG045294 | 0.803318 | 6.212814e-49 | 9.058940e-47 |
MsaG027208 | MsaG045294 | 0.800374 | 2.482835e-48 | 3.385411e-46 |
MsaG027982 | MsaG045294 | 0.805918 | 1.791665e-49 | 2.775057e-47 |
MsaG028019 | MsaG045294 | 0.814019 | 3.290013e-51 | 6.204825e-49 |
MsaG028740 | MsaG045294 | 0.824444 | 1.424590e-53 | 3.529668e-51 |
MsaG028970 | MsaG045294 | 0.808491 | 5.140643e-50 | 8.465066e-48 |
MsaG029524 | MsaG045294 | 0.811539 | 1.141798e-50 | 2.024597e-48 |
MsaG029894 | MsaG045294 | 0.803313 | 6.226687e-49 | 9.078128e-47 |
MsaG030833 | MsaG045294 | 0.847125 | 2.657960e-59 | 1.307025e-56 |
MsaG032196 | MsaG045294 | 0.810076 | 2.358578e-50 | 4.035242e-48 |
MsaG032531 | MsaG045294 | 0.810511 | 1.902332e-50 | 3.289380e-48 |
MsaG032726 | MsaG045294 | 0.816086 | 1.149531e-51 | 2.284146e-49 |
MsaG033732 | MsaG045294 | 0.851630 | 1.497471e-60 | 8.585579e-58 |
MsaG034005 | MsaG045294 | 0.817087 | 6.877974e-52 | 1.402260e-49 |
MsaG034180 | MsaG045294 | 0.845201 | 8.827365e-59 | 4.071518e-56 |
MsaG034161 | MsaG045294 | 0.801367 | 1.560065e-48 | 2.175448e-46 |
MsaG034651 | MsaG045294 | 0.837065 | 1.186579e-56 | 4.229206e-54 |
MsaG035181 | MsaG045294 | 0.805920 | 1.790693e-49 | 2.773626e-47 |
MsaG037253 | MsaG045294 | 0.818378 | 3.527552e-52 | 7.435040e-50 |
MsaG037276 | MsaG045294 | 0.841294 | 9.614323e-58 | 3.909340e-55 |
MsaG037333 | MsaG045294 | 0.837742 | 7.974269e-57 | 2.901470e-54 |
MsaG037650 | MsaG045294 | 0.807018 | 1.052945e-49 | 1.673800e-47 |
MsaG038452 | MsaG045294 | 0.860263 | 4.585812e-63 | 3.602090e-60 |
MsaG038952 | MsaG045294 | 0.824226 | 1.602964e-53 | 3.947823e-51 |
MsaG038991 | MsaG045294 | 0.851586 | 1.541179e-60 | 8.822150e-58 |
MsaG039098 | MsaG045294 | 0.835327 | 3.262834e-56 | 1.103678e-53 |
MsaG039848 | MsaG045294 | 0.808706 | 4.625122e-50 | 7.656131e-48 |
MsaG040039 | MsaG045294 | 0.829197 | 1.056336e-54 | 2.987326e-52 |
MsaG040336 | MsaG045294 | 0.802581 | 8.807012e-49 | 1.262585e-46 |
MsaG040435 | MsaG045294 | 0.800824 | 2.012333e-48 | 2.771864e-46 |
MsaG040499 | MsaG045294 | 0.814258 | 2.915741e-51 | 5.532087e-49 |
MsaG040525 | MsaG045294 | 0.805079 | 2.681624e-49 | 4.073016e-47 |
MsaG040545 | MsaG045294 | 0.804865 | 2.972381e-49 | 4.492190e-47 |
MsaG040955 | MsaG045294 | 0.814212 | 2.983518e-51 | 5.654267e-49 |
MsaG041623 | MsaG045294 | 0.800430 | 2.419283e-48 | 3.302943e-46 |
MsaG041615 | MsaG045294 | 0.811078 | 1.435916e-50 | 2.517550e-48 |
MsaG041801 | MsaG045294 | 0.809941 | 2.521548e-50 | 4.299870e-48 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG045294 | MtrunA17_Chr4g0061561 | 95.752 | 306 | 10 | 3 | 1 | 304 | 2 | 306 | 0.0 | 581 |
MsaG045294 | MtrunA17_Chr3g0086961 | 44.022 | 368 | 126 | 16 | 4 | 297 | 3 | 364 | 5.94e-59 | 193 |
MsaG045294 | MtrunA17_Chr7g0219461 | 61.017 | 118 | 45 | 1 | 1 | 117 | 1 | 118 | 1.93e-43 | 152 |
MsaG045294 | MtrunA17_Chr6g0454781 | 71.429 | 84 | 24 | 0 | 38 | 121 | 31 | 114 | 1.63e-37 | 136 |
MsaG045294 | MtrunA17_Chr8g0376571 | 69.863 | 73 | 22 | 0 | 46 | 118 | 51 | 123 | 2.89e-28 | 114 |
MsaG045294 | MtrunA17_Chr8g0360441 | 52.809 | 89 | 42 | 0 | 29 | 117 | 27 | 115 | 2.78e-22 | 96.3 |
MsaG045294 | MtrunA17_Chr4g0040921 | 54.321 | 81 | 37 | 0 | 49 | 129 | 15 | 95 | 4.22e-22 | 94.7 |
MsaG045294 | MtrunA17_Chr2g0325171 | 61.765 | 68 | 26 | 0 | 50 | 117 | 18 | 85 | 2.34e-21 | 92.4 |
MsaG045294 | MtrunA17_Chr2g0316391 | 58.824 | 68 | 28 | 0 | 50 | 117 | 14 | 81 | 2.39e-20 | 89.0 |
MsaG045294 | MtrunA17_Chr1g0205131 | 50.000 | 60 | 30 | 0 | 55 | 114 | 108 | 167 | 1.35e-12 | 67.8 |
MsaG045294 | MtrunA17_Chr7g0220931 | 49.123 | 57 | 29 | 0 | 58 | 114 | 122 | 178 | 2.85e-12 | 66.6 |
MsaG045294 | MtrunA17_Chr6g0456881 | 48.276 | 58 | 30 | 0 | 57 | 114 | 127 | 184 | 4.43e-12 | 66.2 |
MsaG045294 | MtrunA17_Chr4g0062691 | 48.276 | 58 | 30 | 0 | 57 | 114 | 133 | 190 | 6.20e-12 | 65.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG045294 | AT5G60970.1 | 80.682 | 88 | 16 | 1 | 39 | 125 | 45 | 132 | 5.46e-46 | 159 |
MsaG045294 | AT3G02150.1 | 43.062 | 209 | 101 | 7 | 10 | 200 | 28 | 236 | 3.59e-42 | 147 |
MsaG045294 | AT3G02150.2 | 43.062 | 209 | 101 | 7 | 10 | 200 | 28 | 236 | 1.42e-41 | 147 |
MsaG045294 | AT5G08070.2 | 50.676 | 148 | 64 | 4 | 21 | 168 | 2 | 140 | 1.68e-40 | 142 |
MsaG045294 | AT5G08070.1 | 50.676 | 148 | 64 | 4 | 21 | 168 | 2 | 140 | 1.68e-40 | 142 |
MsaG045294 | AT1G30210.2 | 55.752 | 113 | 44 | 3 | 8 | 118 | 4 | 112 | 3.84e-30 | 116 |
MsaG045294 | AT1G30210.1 | 55.752 | 113 | 44 | 3 | 8 | 118 | 4 | 112 | 3.84e-30 | 116 |
MsaG045294 | AT4G18390.1 | 68.493 | 73 | 23 | 0 | 46 | 118 | 32 | 104 | 3.33e-28 | 112 |
MsaG045294 | AT4G18390.2 | 68.493 | 73 | 23 | 0 | 46 | 118 | 32 | 104 | 3.33e-28 | 112 |
MsaG045294 | AT1G53230.1 | 57.500 | 80 | 31 | 1 | 50 | 126 | 43 | 122 | 2.54e-23 | 99.4 |
MsaG045294 | AT1G53230.2 | 57.500 | 80 | 31 | 1 | 50 | 126 | 43 | 122 | 2.54e-23 | 99.4 |
MsaG045294 | AT3G15030.2 | 61.765 | 68 | 26 | 0 | 50 | 117 | 39 | 106 | 3.85e-22 | 96.3 |
MsaG045294 | AT3G15030.4 | 61.765 | 68 | 26 | 0 | 50 | 117 | 39 | 106 | 3.85e-22 | 96.3 |
MsaG045294 | AT3G15030.3 | 61.765 | 68 | 26 | 0 | 50 | 117 | 39 | 106 | 3.85e-22 | 96.3 |
MsaG045294 | AT3G15030.1 | 61.765 | 68 | 26 | 0 | 50 | 117 | 39 | 106 | 3.85e-22 | 96.3 |
MsaG045294 | AT2G31070.1 | 60.606 | 66 | 26 | 0 | 49 | 114 | 22 | 87 | 2.39e-20 | 90.5 |
MsaG045294 | AT1G68800.1 | 46.269 | 67 | 36 | 0 | 48 | 114 | 104 | 170 | 1.12e-14 | 73.9 |
MsaG045294 | AT1G68800.2 | 46.269 | 67 | 36 | 0 | 48 | 114 | 104 | 170 | 1.27e-14 | 73.9 |
MsaG045294 | AT1G67260.2 | 41.429 | 70 | 41 | 0 | 45 | 114 | 76 | 145 | 6.24e-14 | 72.0 |
MsaG045294 | AT1G67260.3 | 41.429 | 70 | 41 | 0 | 45 | 114 | 76 | 145 | 6.24e-14 | 72.0 |
MsaG045294 | AT1G67260.1 | 41.429 | 70 | 41 | 0 | 45 | 114 | 76 | 145 | 7.73e-14 | 71.6 |
MsaG045294 | AT3G18550.1 | 39.024 | 82 | 49 | 1 | 33 | 114 | 126 | 206 | 2.21e-12 | 67.8 |
MsaG045294 | AT3G18550.4 | 39.024 | 82 | 49 | 1 | 33 | 114 | 126 | 206 | 2.21e-12 | 67.8 |
MsaG045294 | AT3G18550.2 | 39.024 | 82 | 49 | 1 | 33 | 114 | 126 | 206 | 2.25e-12 | 67.8 |
MsaG045294 | AT3G18550.3 | 39.024 | 82 | 49 | 1 | 33 | 114 | 126 | 206 | 2.89e-12 | 67.4 |
Find 55 sgRNAs with CRISPR-Local
Find sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CGTCTAAACGGCGAATTTAT+TGG | 0.202116 | 8:-70944545 | None:intergenic |
GAAATAAATTACCATGATTA+TGG | 0.231308 | 8:-70944277 | None:intergenic |
ACTCTATCTTTATCACAATT+TGG | 0.233467 | 8:+70944251 | MsaT045294.1:CDS |
CGTGACACTCTCACTATTCT+TGG | 0.252002 | 8:-70943834 | None:intergenic |
CTTGAAGGATCCAATTTATA+TGG | 0.254937 | 8:-70944227 | None:intergenic |
TACTACCTGGTTGCTGAAAT+AGG | 0.258592 | 8:-70944085 | None:intergenic |
CTACCATAACTACCCATTTC+TGG | 0.267833 | 8:-70944618 | None:intergenic |
AGCAAAGTTTGCACAATTAG+AGG | 0.305586 | 8:+70943882 | MsaT045294.1:CDS |
TGATGTAGCTATTGCTTTGT+TGG | 0.307657 | 8:-70943787 | None:intergenic |
GTGAGAGTGTCACGTTCTTT+AGG | 0.317533 | 8:+70943843 | MsaT045294.1:CDS |
GATGATAATAACACCAGAAA+TGG | 0.330153 | 8:+70944605 | MsaT045294.1:CDS |
AATTCACTACTTTCCATTGA+TGG | 0.341892 | 8:-70944449 | None:intergenic |
GATTAAGAGACCGTAGGATT+AGG | 0.348209 | 8:+70943904 | MsaT045294.1:CDS |
TGTGAATTACCAGATGAATT+AGG | 0.362279 | 8:-70944365 | None:intergenic |
ACTACCTGGTTGCTGAAATA+GGG | 0.363637 | 8:-70944084 | None:intergenic |
AATACTAATTATTCATCAAA+TGG | 0.403938 | 8:+70944194 | MsaT045294.1:CDS |
CTAGTACTTATTTGATAAGA+AGG | 0.404054 | 8:-70944299 | None:intergenic |
TTTATTGGAAGATGAATAGT+TGG | 0.406511 | 8:-70944530 | None:intergenic |
AGAAGCTGAAAGTTCAGAAA+AGG | 0.433467 | 8:+70944160 | MsaT045294.1:CDS |
TACTCTGAATGCTCCATCAA+TGG | 0.441615 | 8:+70944436 | MsaT045294.1:CDS |
GTTCAAGATTTGAACATGGT+TGG | 0.449373 | 8:-70944483 | None:intergenic |
TATGGTATGAATCAAACTAA+AGG | 0.451228 | 8:+70944134 | MsaT045294.1:CDS |
TTGACAGTACCTAATTCATC+TGG | 0.458238 | 8:+70944356 | MsaT045294.1:CDS |
AACCTAGCAAAGTTGTTGAA+TGG | 0.462940 | 8:+70943985 | MsaT045294.1:CDS |
AGTGTTGGATGGCGTCTAAA+CGG | 0.463809 | 8:-70944557 | None:intergenic |
ATCATCTGAATCAAGAAGCT+TGG | 0.472188 | 8:-70944588 | None:intergenic |
TGAACATGGTTGGATTGTCT+TGG | 0.473682 | 8:-70944473 | None:intergenic |
GGATCCAATTTATATGGAAA+AGG | 0.478861 | 8:-70944221 | None:intergenic |
ATGATAATAACACCAGAAAT+GGG | 0.506853 | 8:+70944606 | MsaT045294.1:CDS |
ATGAAAGAACCATTACTTGA+GGG | 0.508573 | 8:-70944506 | None:intergenic |
AGAAGGTGAACATGGAAGAA+TGG | 0.508923 | 8:+70943749 | MsaT045294.1:CDS |
TGTTGTTGAGTGAAACTTTG+AGG | 0.510713 | 8:-70944059 | None:intergenic |
GATAAAGATAGAGTACTTGA+AGG | 0.512410 | 8:-70944242 | None:intergenic |
AACCATTCAACAACTTTGCT+AGG | 0.525009 | 8:-70943987 | None:intergenic |
GAAGCTGAAAGTTCAGAAAA+GGG | 0.530447 | 8:+70944161 | MsaT045294.1:CDS |
AGCTTGGAACTAAACAGTGT+TGG | 0.544286 | 8:-70944572 | None:intergenic |
TATGATCTTCAAGACAGACT+TGG | 0.562288 | 8:+70943954 | MsaT045294.1:CDS |
ATCTTGAACCCCTCAAGTAA+TGG | 0.568276 | 8:+70944497 | MsaT045294.1:CDS |
AGAGTGTCACGTTCTTTAGG+AGG | 0.573587 | 8:+70943846 | MsaT045294.1:CDS |
CAATTTGGAAGCCATAATCA+TGG | 0.577888 | 8:+70944266 | MsaT045294.1:CDS |
TCATATAGCTGAATTGCTGT+TGG | 0.578184 | 8:-70943936 | None:intergenic |
AATGAAAGAACCATTACTTG+AGG | 0.584582 | 8:-70944507 | None:intergenic |
ACAAAACAAGAAGGTGAACA+TGG | 0.590894 | 8:+70943741 | MsaT045294.1:CDS |
AAAGAAGCAACAAAACAAGA+AGG | 0.599775 | 8:+70943732 | MsaT045294.1:CDS |
GTACAGACAACCTAATCCTA+CGG | 0.604529 | 8:-70943914 | None:intergenic |
TCTTATCAAATAAGTACTAG+TGG | 0.608228 | 8:+70944302 | MsaT045294.1:CDS |
TGAAAGAACCATTACTTGAG+GGG | 0.615132 | 8:-70944505 | None:intergenic |
GATGGCAATGGCATAACAGA+AGG | 0.624451 | 8:-70944401 | None:intergenic |
TGGAACTAAACAGTGTTGGA+TGG | 0.631286 | 8:-70944568 | None:intergenic |
AAACTTTGAGGAATATCAAG+TGG | 0.636206 | 8:-70944047 | None:intergenic |
CAATAGCTACATCAAGACAA+TGG | 0.639730 | 8:+70943796 | MsaT045294.1:CDS |
CTTTGAGGAATATCAAGTGG+TGG | 0.640320 | 8:-70944044 | None:intergenic |
CAAACCCTATTTCAGCAACC+AGG | 0.642234 | 8:+70944080 | MsaT045294.1:CDS |
TTAGAGGATTAAGAGACCGT+AGG | 0.643012 | 8:+70943898 | MsaT045294.1:CDS |
AGGGGTTCAAGATTTGAACA+TGG | 0.658690 | 8:-70944487 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr8 | gene | 70943702 | 70944631 | 70943702 | ID=MsaG045294 |
Chr8 | mRNA | 70943702 | 70944631 | 70943702 | ID=MsaT045294.1;Parent=MsaG045294 |
Chr8 | exon | 70943702 | 70944631 | 70943702 | ID=MsaT045294.1.exon1;Parent=MsaT045294.1 |
Chr8 | CDS | 70943702 | 70944631 | 70943702 | ID=cds.MsaT045294.1;Parent=MsaT045294.1 |
Gene Sequence |
Protein sequence |