AlfalfaGEDB | MsaG045310

M. sativa ssp. caerulea / MsaG045310

KEGG: -
GO: GO:0001067 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0006355 GO:0008150 GO:0009889 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0044212 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:0140110 GO:1901363 GO:1903506 GO:2000112 GO:2001141
PFAM: PF02701.18

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG045310	XP_013458026.1	97.516	322	6	1	1	322	1	320	0.0	643

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG045310	sp\|Q8LDR0\|DOF54_ARATH	42.857	322	114	12	23	322	34	307	5.61e-54	181

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG045310	tr\|A0A072UQU9\|A0A072UQU9_MEDTR	97.516	322	6	1	1	322	1	320	0.0	643

TFs/TRs:

Gene ID	Type	Classification
MsaG045310	TF	C2C2-Dof

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsaG000193	MsaG045310	0.811043	1.461172e-50	2.559611e-48
MsaG000320	MsaG045310	0.808394	5.388498e-50	8.852349e-48
MsaG000476	MsaG045310	0.838662	4.631271e-57	1.733909e-54
MsaG001238	MsaG045310	0.835298	3.319540e-56	1.121854e-53
MsaG002491	MsaG045310	0.819075	2.454617e-52	5.268695e-50
MsaG003768	MsaG045310	0.810047	2.392330e-50	4.090052e-48
MsaG004462	MsaG045310	0.831486	2.931508e-55	8.854459e-53
MsaG004504	MsaG045310	0.827473	2.739048e-54	7.380184e-52
MsaG005274	MsaG045310	0.833217	1.097699e-55	3.487543e-53
MsaG005277	MsaG045310	0.801306	1.605820e-48	2.236093e-46
MsaG006043	MsaG045310	0.857234	3.649868e-62	2.557877e-59
MsaG006204	MsaG045310	0.808460	5.217827e-50	8.585825e-48
MsaG006219	MsaG045310	0.805191	2.541773e-49	3.870721e-47
MsaG006527	MsaG045310	0.800985	1.866242e-48	2.579971e-46
MsaG006926	MsaG045310	0.833495	9.362479e-56	2.998887e-53
MsaG007287	MsaG045310	0.803857	4.809461e-49	7.100541e-47
MsaG007432	MsaG045310	0.862071	1.299515e-63	1.093639e-60
MsaG009786	MsaG045310	0.859174	9.725478e-63	7.327750e-60
MsaG010050	MsaG045310	0.807025	1.049604e-49	1.668737e-47
MsaG012448	MsaG045310	0.860090	5.172263e-63	4.035399e-60
MsaG012555	MsaG045310	0.823685	2.142827e-53	5.200968e-51
MsaG044218	MsaG045310	0.801137	1.737951e-48	2.410872e-46
MsaG044622	MsaG045310	0.808857	4.296198e-50	7.137368e-48
MsaG045078	MsaG045310	0.821844	5.724640e-53	1.322049e-50
MsaG045310	MsaG045262	0.825077	1.012426e-53	2.552138e-51
MsaG045310	MsaG045392	0.817984	4.326784e-52	9.027424e-50
MsaG045310	MsaG046473	0.839909	2.206698e-57	8.590372e-55
MsaG045310	MsaG046807	0.820180	1.377389e-52	3.043956e-50
MsaG045310	MsaG047014	0.825774	6.934507e-54	1.782078e-51
MsaG045310	MsaG000960	0.803845	4.835857e-49	7.137602e-47
MsaG045310	MsaG001986	0.825374	8.616261e-54	2.189843e-51
MsaG045310	MsaG003742	0.825383	8.574572e-54	2.179737e-51
MsaG045310	MsaG000974	0.803456	5.820155e-49	8.513272e-47
MsaG045310	MsaG013226	0.816680	8.478694e-52	1.710486e-49
MsaG045310	MsaG019866	0.800143	2.765151e-48	3.750701e-46
MsaG045310	MsaG026431	0.840137	1.926317e-57	7.552119e-55
MsaG045310	MsaG028141	0.821662	6.302967e-53	1.448608e-50
MsaG045310	MsaG030214	0.808443	5.261127e-50	8.653568e-48
MsaG045310	MsaG031914	0.804074	4.336784e-49	6.435389e-47
MsaG045310	MsaG040777	0.816966	7.318636e-52	1.487428e-49
MsaG045310	MsaG035914	0.800185	2.711673e-48	3.681607e-46
MsaG045310	MsaG037405	0.804564	3.431421e-49	5.149933e-47
MsaG045310	MsaG036029	0.804813	3.046823e-49	4.599199e-47
MsaG013325	MsaG045310	0.800922	1.921846e-48	2.653052e-46
MsaG014153	MsaG045310	0.860692	3.405154e-63	2.718831e-60
MsaG014247	MsaG045310	0.869787	4.842700e-66	5.561780e-63
MsaG017313	MsaG045310	0.848042	1.491857e-59	7.566219e-57
MsaG018103	MsaG045310	0.820826	9.803893e-53	2.203792e-50
MsaG018104	MsaG045310	0.855827	9.416535e-62	6.267799e-59
MsaG018290	MsaG045310	0.807075	1.024547e-49	1.630814e-47
MsaG018565	MsaG045310	0.850201	3.768947e-60	2.056601e-57
MsaG018560	MsaG045310	0.820413	1.218685e-52	2.709787e-50
MsaG018813	MsaG045310	0.826497	4.677295e-54	1.226436e-51
MsaG019055	MsaG045310	0.817818	4.715148e-52	9.795667e-50
MsaG019564	MsaG045310	0.809646	2.915484e-50	4.936446e-48
MsaG019628	MsaG045310	0.819475	1.992230e-52	4.321275e-50
MsaG020616	MsaG045310	0.825772	6.944147e-54	1.784408e-51
MsaG021325	MsaG045310	0.815626	1.454489e-51	2.856587e-49
MsaG023133	MsaG045310	0.812216	8.143219e-51	1.468126e-48
MsaG024733	MsaG045310	0.828950	1.211598e-54	3.402594e-52
MsaG025488	MsaG045310	0.804935	2.873972e-49	4.350488e-47
MsaG025651	MsaG045310	0.827828	2.252779e-54	6.131057e-52
MsaG027025	MsaG045310	0.828815	1.306117e-54	3.654214e-52
MsaG029424	MsaG045310	0.863553	4.559561e-64	4.067171e-61
MsaG029593	MsaG045310	0.828045	1.998560e-54	5.472321e-52
MsaG029763	MsaG045310	0.801248	1.649710e-48	2.294191e-46
MsaG029896	MsaG045310	0.859953	5.685905e-63	4.412774e-60
MsaG031754	MsaG045310	0.803612	5.403528e-49	7.932481e-47
MsaG033318	MsaG045310	0.854400	2.435941e-61	1.540494e-58
MsaG033646	MsaG045310	0.823516	2.347250e-53	5.670697e-51
MsaG034996	MsaG045310	0.826926	3.697439e-54	9.811487e-52
MsaG041112	MsaG045310	0.839977	2.119242e-57	8.267082e-55
MsaG041285	MsaG045310	0.822020	5.213771e-53	1.209740e-50

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG045310	MtrunA17_Chr4g0061761	97.516	322	6	1	1	322	1	320	0.0	643
MsaG045310	MtrunA17_Chr2g0308011	63.000	100	37	0	40	139	37	136	3.61e-34	124
MsaG045310	MtrunA17_Chr2g0328021	63.043	92	25	1	40	131	62	144	5.78e-34	125
MsaG045310	MtrunA17_Chr4g0047001	59.048	105	41	2	20	123	34	137	1.74e-33	127
MsaG045310	MtrunA17_Chr8g0374251	82.759	58	10	0	36	93	64	121	1.28e-31	121
MsaG045310	MtrunA17_Chr8g0341671	80.000	65	12	1	37	100	17	81	1.71e-31	117
MsaG045310	MtrunA17_Chr4g0031411	67.606	71	23	0	37	107	72	142	2.85e-31	120
MsaG045310	MtrunA17_Chr4g0010151	40.361	166	78	3	19	170	54	212	1.16e-30	119
MsaG045310	MtrunA17_Chr7g0237921	47.581	124	47	2	27	150	63	168	1.98e-30	117
MsaG045310	MtrunA17_Chr8g0374111	60.759	79	31	0	37	115	26	104	6.13e-30	114
MsaG045310	MtrunA17_Chr8g0367161	70.833	72	18	1	39	107	31	102	6.63e-30	116
MsaG045310	MtrunA17_Chr7g0223311	82.456	57	10	0	41	97	78	134	1.14e-29	116
MsaG045310	MtrunA17_Chr5g0411951	83.333	54	9	0	37	90	40	93	1.51e-29	115
MsaG045310	MtrunA17_Chr3g0127201	64.865	74	20	1	23	96	16	83	1.69e-29	114
MsaG045310	MtrunA17_Chr4g0030051	70.833	72	15	1	20	91	27	92	2.55e-29	113
MsaG045310	MtrunA17_Chr3g0117601	56.000	100	38	1	23	122	50	143	5.84e-29	113
MsaG045310	MtrunA17_Chr2g0326001	66.667	81	24	1	37	114	37	117	6.19e-29	112
MsaG045310	MtrunA17_Chr2g0282441	86.275	51	7	0	41	91	26	76	2.14e-28	112
MsaG045310	MtrunA17_Chr8g0346551	53.191	94	36	1	21	114	13	98	3.64e-28	110
MsaG045310	MtrunA17_Chr3g0126201	74.194	62	16	0	42	103	53	114	5.83e-28	110
MsaG045310	MtrunA17_Chr1g0177251	77.966	59	13	0	36	94	8	66	3.81e-27	107
MsaG045310	MtrunA17_Chr1g0188851	72.414	58	16	0	37	94	40	97	6.34e-27	107
MsaG045310	MtrunA17_Chr2g0282051	70.769	65	18	1	30	94	36	99	2.56e-26	105
MsaG045310	MtrunA17_Chr8g0355261	68.966	58	18	0	38	95	116	173	3.04e-26	107
MsaG045310	MtrunA17_Chr7g0217581	71.186	59	17	0	38	96	230	288	3.67e-26	108
MsaG045310	MtrunA17_Chr2g0282511	84.000	50	8	0	39	88	44	93	4.68e-26	105
MsaG045310	MtrunA17_Chr2g0283811	68.421	57	18	0	37	93	44	100	9.10e-26	100
MsaG045310	MtrunA17_Chr7g0254161	46.316	95	51	0	38	132	99	193	1.15e-25	106
MsaG045310	MtrunA17_Chr6g0453321	67.797	59	19	0	38	96	134	192	2.08e-25	105
MsaG045310	MtrunA17_Chr4g0042481	67.857	56	18	0	38	93	120	175	1.51e-24	103
MsaG045310	MtrunA17_Chr3g0092111	58.904	73	23	1	31	96	120	192	2.74e-24	102
MsaG045310	MtrunA17_Chr6g0460731	46.000	100	50	1	38	137	94	189	4.84e-24	100
MsaG045310	MtrunA17_Chr5g0417571	67.797	59	19	0	38	96	136	194	4.91e-24	100
MsaG045310	MtrunA17_Chr6g0460721	63.158	57	21	0	38	94	87	143	2.79e-23	98.2
MsaG045310	MtrunA17_Chr5g0417601	63.077	65	23	1	30	93	129	193	3.75e-23	98.6
MsaG045310	MtrunA17_Chr5g0417551	66.102	59	20	0	38	96	125	183	6.08e-23	97.8
MsaG045310	MtrunA17_Chr5g0417561	66.102	59	20	0	38	96	117	175	1.12e-22	97.1
MsaG045310	MtrunA17_Chr4g0047761	35.714	168	79	3	38	203	70	210	6.01e-16	77.4

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG045310	AT5G60850.1	42.857	322	114	12	23	322	34	307	5.70e-55	181
MsaG045310	AT1G51700.1	76.712	73	16	1	37	108	30	102	2.13e-33	122
MsaG045310	AT5G65590.1	75.758	66	16	0	36	101	37	102	2.06e-32	122
MsaG045310	AT5G60200.1	67.949	78	19	1	39	116	54	125	3.45e-32	120
MsaG045310	AT5G66940.1	56.989	93	34	1	36	122	28	120	1.90e-31	118
MsaG045310	AT3G45610.1	66.234	77	19	1	37	113	37	106	4.52e-31	117
MsaG045310	AT2G37590.1	68.116	69	22	0	27	95	76	144	1.10e-30	118
MsaG045310	AT2G28510.1	42.778	180	79	5	35	202	43	210	3.40e-30	116
MsaG045310	AT1G07640.1	79.310	58	12	0	40	97	21	78	4.08e-30	115
MsaG045310	AT1G07640.2	79.310	58	12	0	40	97	77	134	5.47e-30	116
MsaG045310	AT1G07640.3	79.310	58	12	0	40	97	85	142	6.91e-30	116
MsaG045310	AT2G28810.2	83.019	53	9	0	39	91	76	128	1.45e-29	115
MsaG045310	AT3G52440.1	71.053	76	17	2	27	102	14	84	1.50e-29	113
MsaG045310	AT3G61850.2	65.000	80	20	1	24	103	54	125	1.54e-29	114
MsaG045310	AT3G61850.3	65.000	80	20	1	24	103	54	125	1.54e-29	114
MsaG045310	AT4G38000.1	63.750	80	20	2	20	90	12	91	1.59e-29	113
MsaG045310	AT3G61850.1	65.000	80	20	1	24	103	66	137	1.60e-29	114
MsaG045310	AT3G61850.5	65.000	80	20	1	24	103	54	125	2.12e-29	114
MsaG045310	AT2G28810.1	83.019	53	9	0	39	91	93	145	2.17e-29	115
MsaG045310	AT3G52440.2	71.053	76	17	2	27	102	33	103	2.20e-29	113
MsaG045310	AT3G61850.4	65.000	80	20	1	24	103	66	137	2.49e-29	114
MsaG045310	AT3G21270.1	88.679	53	6	0	40	92	29	81	3.54e-29	111
MsaG045310	AT3G50410.1	77.049	61	14	0	37	97	27	87	3.75e-29	112
MsaG045310	AT3G55370.1	69.118	68	21	0	35	102	71	138	5.23e-29	114
MsaG045310	AT3G55370.2	69.118	68	21	0	35	102	71	138	6.14e-29	114
MsaG045310	AT3G55370.3	69.118	68	21	0	35	102	116	183	8.90e-29	114
MsaG045310	AT1G28310.1	77.966	59	13	0	40	98	27	85	9.44e-29	113
MsaG045310	AT5G02460.1	75.000	60	15	0	35	94	90	149	1.05e-28	114
MsaG045310	AT4G21050.1	55.882	102	38	2	42	137	26	126	1.08e-28	110
MsaG045310	AT1G28310.2	77.966	59	13	0	40	98	51	109	1.54e-28	112
MsaG045310	AT4G24060.1	63.514	74	21	1	21	94	40	107	3.76e-28	112
MsaG045310	AT1G21340.1	80.357	56	11	0	42	97	40	95	8.39e-28	109
MsaG045310	AT5G62940.1	69.565	69	15	1	22	90	61	123	9.50e-28	111
MsaG045310	AT4G00940.1	64.103	78	28	0	37	114	65	142	3.50e-26	105
MsaG045310	AT4G00940.3	64.103	78	28	0	37	114	65	142	3.50e-26	105
MsaG045310	AT4G00940.2	64.103	78	28	0	37	114	65	142	3.50e-26	105
MsaG045310	AT1G29160.1	71.429	56	16	0	38	93	60	115	1.99e-25	100
MsaG045310	AT2G34140.1	71.429	56	16	0	38	93	56	111	2.24e-25	100
MsaG045310	AT3G47500.1	69.492	59	18	0	38	96	108	166	2.54e-25	105
MsaG045310	AT1G64620.1	61.194	67	20	1	23	89	38	98	4.16e-25	103
MsaG045310	AT2G46590.1	65.152	66	15	1	22	87	58	115	6.66e-25	103
MsaG045310	AT2G46590.2	65.152	66	15	1	22	87	70	127	7.26e-25	103
MsaG045310	AT5G39660.3	69.643	56	17	0	38	93	136	191	1.21e-24	103
MsaG045310	AT5G39660.1	69.643	56	17	0	38	93	136	191	1.21e-24	103
MsaG045310	AT5G39660.2	69.643	56	17	0	38	93	136	191	1.21e-24	103
MsaG045310	AT5G62430.1	64.407	59	21	0	38	96	52	110	3.73e-24	100
MsaG045310	AT1G69570.1	69.643	56	17	0	38	93	130	185	6.09e-24	101
MsaG045310	AT1G47655.1	74.510	51	13	0	38	88	27	77	6.31e-24	97.4
MsaG045310	AT1G26790.1	66.071	56	19	0	38	93	109	164	4.08e-23	98.6
MsaG045310	AT4G21040.1	42.069	145	67	3	42	169	27	171	4.68e-23	95.9
MsaG045310	AT4G21080.1	68.966	58	17	1	42	98	27	84	1.45e-21	92.0
MsaG045310	AT4G21030.1	55.882	68	27	1	42	109	23	87	5.04e-16	75.5

Find 96 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TGCTAGAGCGTTTGGATTTC+CGG	0.179446	8:+71150546	None:intergenic
TTCTGGTCCTGGATCGTTGC+TGG	0.251043	8:-71150057	MsaT045310.1:CDS
GTTATTGTAGTAACAGAATT+TGG	0.266870	8:+71150664	None:intergenic
TCCCCGTCGGTGGCGGTTGC+CGG	0.275837	8:-71150565	MsaT045310.1:CDS
GGTTCAGGTTATTGTTGTTT+TGG	0.289348	8:+71150726	None:intergenic
GAGGACATTTCATGACTTCT+TGG	0.303639	8:+71150705	None:intergenic
AAAACAAGCAACGGTGGATT+TGG	0.307667	8:-71150002	MsaT045310.1:CDS
GAGACATTGCCGTTTGGTTT+TGG	0.311028	8:-71150257	MsaT045310.1:CDS
CGGTAACGCTCATCAGCTTT+TGG	0.328939	8:+71150159	None:intergenic
ACGGTAATGTTAACGTTAAC+GGG	0.351619	8:-71150214	MsaT045310.1:CDS
CAAAAGCTGATGAGCGTTAC+CGG	0.354847	8:-71150158	MsaT045310.1:CDS
ACACCGTTGATCATGGTTAC+TGG	0.364180	8:-71149920	MsaT045310.1:CDS
GACTTATTCTCCGGCGCCTC+CGG	0.380062	8:+71150473	None:intergenic
GTAACAGAATTTGGTGTTGA+TGG	0.387408	8:+71150673	None:intergenic
TTCTTCTCCGGCGGTGGTGT+TGG	0.390782	8:+71150383	None:intergenic
TAACCATGATCAACGGTGTT+AGG	0.392627	8:+71149924	None:intergenic
AACGGTAATGTTAACGTTAA+CGG	0.394532	8:-71150215	MsaT045310.1:CDS
ATAGGTGCTGGTGCTGGTGG+GGG	0.397991	8:-71150086	MsaT045310.1:CDS
AATATAGGTGCTGGTGCTGG+TGG	0.411942	8:-71150089	MsaT045310.1:CDS
GGCGCCTCCGGTGGAGTTGT+CGG	0.413936	8:+71150485	None:intergenic
TATAGGTGCTGGTGCTGGTG+GGG	0.419125	8:-71150087	MsaT045310.1:CDS
CAACGGTGGATTTGGATCGT+TGG	0.423030	8:-71149994	MsaT045310.1:CDS
ATTTCATGACTTCTTGGTTC+AGG	0.424145	8:+71150711	None:intergenic
ATATAGGTGCTGGTGCTGGT+GGG	0.429106	8:-71150088	MsaT045310.1:CDS
CACCGCAGCGGCGGTGAGGC+TGG	0.433116	8:+71150424	None:intergenic
CGCCACCGACGGGGACGTTA+CGG	0.435705	8:+71150573	None:intergenic
AAACGGCAATGTCTCGTTAG+AGG	0.437377	8:+71150265	None:intergenic
GGTTCCTCCGGCGCCTCCGA+TGG	0.440934	8:+71150793	None:intergenic
GCCTCCGCCACCGAAGAATC+TGG	0.443448	8:+71150772	None:intergenic
AGACGCATTGAAGTTGTTAC+CGG	0.443650	8:-71150114	MsaT045310.1:CDS
GTGGATTTGGATCGTTGGAT+TGG	0.444872	8:-71149989	MsaT045310.1:CDS
CTTCCTAACACCGTTGATCA+TGG	0.449712	8:-71149927	MsaT045310.1:CDS
TCGGTGGCGGAGGCGGTGAT+CGG	0.459343	8:-71150763	MsaT045310.1:CDS
TTCCGGCAACCGCCACCGAC+GGG	0.461760	8:+71150563	None:intergenic
CAGCCTCACCGCCGCTGCGG+TGG	0.464633	8:-71150423	MsaT045310.1:CDS
AGATTCTTCGGTGGCGGAGG+CGG	0.473172	8:-71150770	MsaT045310.1:CDS
TCACACTCAATGGTCTGATC+AGG	0.473669	8:-71149895	MsaT045310.1:CDS
GCCGGAGGAACCAGATTCTT+CGG	0.474219	8:-71150782	MsaT045310.1:CDS
AAGTTGTTACCGGAGAATAT+AGG	0.476958	8:-71150104	MsaT045310.1:CDS
TAACGTTAACATTACCGTTA+CGG	0.477277	8:+71150219	None:intergenic
GATTCACTTGAACAAGGAAC+AGG	0.481996	8:-71150338	MsaT045310.1:CDS
CGTAACGTCCCCGTCGGTGG+CGG	0.482120	8:-71150572	MsaT045310.1:CDS
GGAACTCTCACTGCTGGAAT+GGG	0.482309	8:+71150445	None:intergenic
TGGAACTCTCACTGCTGGAA+TGG	0.493236	8:+71150444	None:intergenic
TCTAACGAGACATTGCCGTT+TGG	0.499608	8:-71150263	MsaT045310.1:CDS
ACCAGATTCTTCGGTGGCGG+AGG	0.500004	8:-71150773	MsaT045310.1:CDS
GACAACTCCACCGGAGGCGC+CGG	0.504458	8:-71150483	MsaT045310.1:CDS
ACCGAAGAATCTGGTTCCTC+CGG	0.507560	8:+71150781	None:intergenic
CCATGGTCCAGCAACGATCC+AGG	0.515665	8:+71150050	None:intergenic
CAACATTCCATCGGAGGCGC+CGG	0.516567	8:-71150800	MsaT045310.1:CDS
GAGGCTGGAACTCTCACTGC+TGG	0.519133	8:+71150439	None:intergenic
TTTCCGGCAACCGCCACCGA+CGG	0.522246	8:+71150562	None:intergenic
TGCCGACGTTACTGGACTAA+AGG	0.527907	8:-71150605	MsaT045310.1:CDS
CTCCGTAACGTCCCCGTCGG+TGG	0.530524	8:-71150575	MsaT045310.1:CDS
TTATTCTCCGGCGCCTCCGG+TGG	0.532938	8:+71150476	None:intergenic
CAGCCACCGCAGCGGCGGTG+AGG	0.533594	8:+71150420	None:intergenic
ATGATGCGTCGTCGTTTCAG+TGG	0.549551	8:-71150187	MsaT045310.1:CDS
TCGTTGGATTGGAATGGTGA+TGG	0.550292	8:-71149978	MsaT045310.1:CDS
CATTCCATCGGAGGCGCCGG+AGG	0.561089	8:-71150797	MsaT045310.1:CDS
TTTGGATCGTTGGATTGGAA+TGG	0.568406	8:-71149984	MsaT045310.1:CDS
TGGGAGTTAGACTTATTCTC+CGG	0.569296	8:+71150464	None:intergenic
TTCAGAACCAACACCACCGC+CGG	0.573448	8:-71150390	MsaT045310.1:CDS
GTTACTGGAATCACACTCAA+TGG	0.574806	8:-71149905	MsaT045310.1:CDS
TTACCGGAGAATATAGGTGC+TGG	0.577924	8:-71150098	MsaT045310.1:CDS
CGGTAAAACAGTGGAATCTG+AGG	0.581795	8:+71150505	None:intergenic
GTCCTCCGTAACGTCCCCGT+CGG	0.588295	8:-71150578	MsaT045310.1:CDS
TGTTTCAGCCACCGCAGCGG+CGG	0.589914	8:+71150415	None:intergenic
GAGAATATAGGTGCTGGTGC+TGG	0.591108	8:-71150092	MsaT045310.1:CDS
TTCCAGCCTCACCGCCGCTG+CGG	0.594936	8:-71150426	MsaT045310.1:CDS
GGAACCAGATTCTTCGGTGG+CGG	0.595461	8:-71150776	MsaT045310.1:CDS
GCACCAGCACCTATATTCTC+CGG	0.599864	8:+71150095	None:intergenic
AGAAGTGACGAGGCTGAGAG+AGG	0.604907	8:+71150636	None:intergenic
GAACAAGGAACAGGTGATTG+TGG	0.605175	8:-71150329	MsaT045310.1:CDS
TCCGGCAACCGCCACCGACG+GGG	0.606442	8:+71150564	None:intergenic
TTACCGATACCAAAACCAAA+CGG	0.611130	8:+71150248	None:intergenic
CTGCAGAGTAAAACAAGCAA+CGG	0.614794	8:-71150011	MsaT045310.1:CDS
CCTGGATCGTTGCTGGACCA+TGG	0.617986	8:-71150050	MsaT045310.1:CDS
GAGAATGATTCACTTGAACA+AGG	0.621864	8:-71150344	MsaT045310.1:CDS
CAGAGTAAAACAAGCAACGG+TGG	0.633363	8:-71150008	MsaT045310.1:CDS
GAGATACAACATTCCATCGG+AGG	0.634291	8:-71150806	MsaT045310.1:CDS
GCAAAGAGAAATCAATACCA+TGG	0.638840	8:+71150033	None:intergenic
AACTGTTTCAGCCACCGCAG+CGG	0.652527	8:+71150412	None:intergenic
ATCGGTAACGATAACCGTAA+CGG	0.654058	8:-71150233	MsaT045310.1:CDS
TAAAACAGTGGAATCTGAGG+AGG	0.660488	8:+71150508	None:intergenic
TTTACCGACAACTCCACCGG+AGG	0.660654	8:-71150489	MsaT045310.1:CDS
CGCCTTTAGTCCAGTAACGT+CGG	0.661444	8:+71150603	None:intergenic
GATGGTGGTGCAGATCATCA+AGG	0.664273	8:-71149960	MsaT045310.1:CDS
CACCGACGGGGACGTTACGG+AGG	0.667570	8:+71150576	None:intergenic
CAGGAGATACAACATTCCAT+CGG	0.667929	8:-71150809	MsaT045310.1:CDS
TGGAGTTGTCGGTAAAACAG+TGG	0.668985	8:+71150496	None:intergenic
GGAGGAACCAGATTCTTCGG+TGG	0.672184	8:-71150779	MsaT045310.1:CDS
ATTCCAGTAACCATGATCAA+CGG	0.674918	8:+71149917	None:intergenic
CCGGAGAAGAAAATCAACAA+AGG	0.680379	8:-71150371	MsaT045310.1:CDS
TTGGATTGGAATGGTGATGG+TGG	0.685796	8:-71149975	MsaT045310.1:CDS
CGACGTTACTGGACTAAAGG+CGG	0.694270	8:-71150602	MsaT045310.1:CDS
GTGTTGATGGAGTCACAGCG+AGG	0.726737	8:+71150686	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content

Chromosome	Type	Strat	End	Strand	Name
Chr8	gene	71149866	71150834	71149866	ID=MsaG045310
Chr8	mRNA	71149866	71150834	71149866	ID=MsaT045310.1;Parent=MsaG045310
Chr8	exon	71149866	71150834	71149866	ID=MsaT045310.1.exon1;Parent=MsaT045310.1
Chr8	CDS	71149866	71150834	71149866	ID=cds.MsaT045310.1;Parent=MsaT045310.1

Gene Sequence

>MsaT045310.1

ATGCAGGAGATACAACATTCCATCGGAGGCGCCGGAGGAACCAGATTCTTCGGTGGCGGAGGCGGTGATCGGCGTCTCAGACCCAACCAAAACAACAATAACCTGAACCAAGAAGTCATGAAATGTCCTCGCTGTGACTCCATCAACACCAAATTCTGTTACTACAATAACTACAACCTCTCTCAGCCTCGTCACTTCTGCAAAAACTGCCGACGTTACTGGACTAAAGGCGGTGTCCTCCGTAACGTCCCCGTCGGTGGCGGTTGCCGGAAATCCAAACGCTCTAGCAAACCAAAAAAATCTTCCTCCTCAGATTCCACTGTTTTACCGACAACTCCACCGGAGGCGCCGGAGAATAAGTCTAACTCCCATTCCAGCAGTGAGAGTTCCAGCCTCACCGCCGCTGCGGTGGCTGAAACAGTTTCAGAACCAACACCACCGCCGGAGAAGAAAATCAACAAAGGTTTTGAGAATGATTCACTTGAACAAGGAACAGGTGATTGTGGTATATTCTCAGAGATCGCAACTTTCACAAGCTTGATCACTTCCTCTAACGAGACATTGCCGTTTGGTTTTGGTATCGGTAACGATAACCGTAACGGTAATGTTAACGTTAACGGGTTTAATGATGCGTCGTCGTTTCAGTGGCAAAACCAAAAGCTGATGAGCGTTACCGGCGATCAAAAACATCATGAAGAAGACGCATTGAAGTTGTTACCGGAGAATATAGGTGCTGGTGCTGGTGGGGGTGGTTCTTCTGGTCCTGGATCGTTGCTGGACCATGGTATTGATTTCTCTTTGCTGCAGAGTAAAACAAGCAACGGTGGATTTGGATCGTTGGATTGGAATGGTGATGGTGGTGCAGATCATCAAGGTTTGTTTGATCTTCCTAACACCGTTGATCATGGTTACTGGAATCACACTCAATGGTCTGATCAGGATCATTCTTCTCTCTTTCATCTTCCATGA

Protein sequence

>MsaT045310.1

MQEIQHSIGGAGGTRFFGGGGGDRRLRPNQNNNNLNQEVMKCPRCDSINTKFCYYNNYNLSQPRHFCKNCRRYWTKGGVLRNVPVGGGCRKSKRSSKPKKSSSSDSTVLPTTPPEAPENKSNSHSSSESSSLTAAAVAETVSEPTPPPEKKINKGFENDSLEQGTGDCGIFSEIATFTSLITSSNETLPFGFGIGNDNRNGNVNVNGFNDASSFQWQNQKLMSVTGDQKHHEEDALKLLPENIGAGAGGGGSSGPGSLLDHGIDFSLLQSKTSNGGFGSLDWNGDGGADHQGLFDLPNTVDHGYWNHTQWSDQDHSSLFHLP*