Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG045348 | XP_003609137.1 | 99.346 | 153 | 1 | 0 | 1 | 153 | 1 | 153 | 8.10e-109 | 316 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG045348 | sp|P49592|NC2B_ARATH | 85.235 | 149 | 21 | 1 | 1 | 149 | 1 | 148 | 8.42e-92 | 266 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG045348 | tr|G7JT12|G7JT12_MEDTR | 99.346 | 153 | 1 | 0 | 1 | 153 | 1 | 153 | 3.87e-109 | 316 |
Gene ID | Type | Classification |
---|---|---|
MsaG045348 | TF | NF-YB |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsaG000290 | MsaG045348 | 0.805444 | 2.251577e-49 | 3.448877e-47 |
MsaG000863 | MsaG045348 | 0.827313 | 2.991210e-54 | 8.023597e-52 |
MsaG002146 | MsaG045348 | 0.807391 | 8.787616e-50 | 1.409305e-47 |
MsaG002435 | MsaG045348 | 0.844800 | 1.131804e-58 | 5.152341e-56 |
MsaG002826 | MsaG045348 | 0.822998 | 3.095666e-53 | 7.374929e-51 |
MsaG002888 | MsaG045348 | 0.806270 | 1.512037e-49 | 2.361666e-47 |
MsaG003335 | MsaG045348 | 0.807083 | 1.020542e-49 | 1.624756e-47 |
MsaG005330 | MsaG045348 | 0.807952 | 6.685531e-50 | 1.086747e-47 |
MsaG005434 | MsaG045348 | 0.825803 | 6.827492e-54 | 1.755988e-51 |
MsaG006759 | MsaG045348 | 0.820468 | 1.183531e-52 | 2.635531e-50 |
MsaG007372 | MsaG045348 | 0.800413 | 2.438399e-48 | 3.327815e-46 |
MsaG008090 | MsaG045348 | 0.819409 | 2.062337e-52 | 4.465662e-50 |
MsaG008200 | MsaG045348 | 0.814983 | 2.017962e-51 | 3.899266e-49 |
MsaG008470 | MsaG045348 | 0.811940 | 9.347786e-51 | 1.673974e-48 |
MsaG008892 | MsaG045348 | 0.857449 | 3.156788e-62 | 2.230088e-59 |
MsaG009484 | MsaG045348 | 0.817332 | 6.060468e-52 | 1.243400e-49 |
MsaG009757 | MsaG045348 | 0.807445 | 8.558830e-50 | 1.374395e-47 |
MsaG009919 | MsaG045348 | 0.815792 | 1.336323e-51 | 2.635518e-49 |
MsaG010331 | MsaG045348 | 0.806641 | 1.264242e-49 | 1.991938e-47 |
MsaG010332 | MsaG045348 | 0.834853 | 4.292657e-56 | 1.431597e-53 |
MsaG010334 | MsaG045348 | 0.836462 | 1.687813e-56 | 5.907214e-54 |
MsaG010565 | MsaG045348 | 0.817390 | 5.883573e-52 | 1.208898e-49 |
MsaG010573 | MsaG045348 | 0.848937 | 8.454824e-60 | 4.419259e-57 |
MsaG011229 | MsaG045348 | 0.816372 | 9.932085e-52 | 1.987979e-49 |
MsaG011413 | MsaG045348 | 0.864084 | 3.123485e-64 | 2.845056e-61 |
MsaG011458 | MsaG045348 | 0.814063 | 3.217254e-51 | 6.074383e-49 |
MsaG011852 | MsaG045348 | 0.808298 | 5.648590e-50 | 9.258383e-48 |
MsaG012473 | MsaG045348 | 0.811377 | 1.237446e-50 | 2.185523e-48 |
MsaG042799 | MsaG045348 | 0.819457 | 2.010854e-52 | 4.359706e-50 |
MsaG043687 | MsaG045348 | 0.800453 | 2.392999e-48 | 3.268785e-46 |
MsaG044568 | MsaG045348 | 0.813129 | 5.154040e-51 | 9.505933e-49 |
MsaG044571 | MsaG045348 | 0.810892 | 1.574916e-50 | 2.748663e-48 |
MsaG044703 | MsaG045348 | 0.907191 | 1.576326e-80 | 1.243912e-76 |
MsaG045121 | MsaG045348 | 0.804813 | 3.047084e-49 | 4.599579e-47 |
MsaG045122 | MsaG045348 | 0.800347 | 2.514938e-48 | 3.427075e-46 |
MsaG045152 | MsaG045348 | 0.815101 | 1.901089e-51 | 3.684228e-49 |
MsaG045294 | MsaG045348 | 0.830281 | 5.768187e-55 | 1.682856e-52 |
MsaG045295 | MsaG045348 | 0.823269 | 2.678205e-53 | 6.427371e-51 |
MsaG045314 | MsaG045348 | 0.841725 | 7.411565e-58 | 3.055041e-55 |
MsaG045348 | MsaG046304 | 0.812893 | 5.802542e-51 | 1.063905e-48 |
MsaG045348 | MsaG046347 | 0.830966 | 3.929144e-55 | 1.168986e-52 |
MsaG045348 | MsaG046348 | 0.836867 | 1.332217e-56 | 4.719793e-54 |
MsaG045348 | MsaG002656 | 0.857171 | 3.810188e-62 | 2.663924e-59 |
MsaG045348 | MsaG000781 | 0.855045 | 1.586723e-61 | 1.026704e-58 |
MsaG045348 | MsaG013963 | 0.823186 | 2.799724e-53 | 6.703716e-51 |
MsaG045348 | MsaG013435 | 0.815130 | 1.872808e-51 | 3.632047e-49 |
MsaG045348 | MsaG016310 | 0.800421 | 2.429466e-48 | 3.316216e-46 |
MsaG045348 | MsaG020089 | 0.841226 | 1.001698e-57 | 4.064325e-55 |
MsaG045348 | MsaG019768 | 0.826608 | 4.401293e-54 | 1.157586e-51 |
MsaG045348 | MsaG018616 | 0.916940 | 2.442440e-85 | 3.693949e-81 |
MsaG045348 | MsaG020214 | 0.817493 | 5.578426e-52 | 1.149247e-49 |
MsaG045348 | MsaG020276 | 0.820083 | 1.448752e-52 | 3.193465e-50 |
MsaG045348 | MsaG026757 | 0.838873 | 4.088519e-57 | 1.540839e-54 |
MsaG045348 | MsaG029709 | 0.827940 | 2.117977e-54 | 5.782199e-52 |
MsaG045348 | MsaG027624 | 0.828301 | 1.735805e-54 | 4.786969e-52 |
MsaG045348 | MsaG027799 | 0.831452 | 2.987565e-55 | 9.014831e-53 |
MsaG045348 | MsaG029494 | 0.803588 | 5.464762e-49 | 8.018050e-47 |
MsaG045348 | MsaG031630 | 0.803906 | 4.697286e-49 | 6.942881e-47 |
MsaG045348 | MsaG031442 | 0.825073 | 1.014620e-53 | 2.557427e-51 |
MsaG045348 | MsaG033152 | 0.842043 | 6.113621e-58 | 2.545940e-55 |
MsaG045348 | MsaG045464 | 0.828957 | 1.206904e-54 | 3.390141e-52 |
MsaG012834 | MsaG045348 | 0.803633 | 5.349547e-49 | 7.857065e-47 |
MsaG013123 | MsaG045348 | 0.805338 | 2.368368e-49 | 3.618903e-47 |
MsaG013438 | MsaG045348 | 0.805779 | 1.916555e-49 | 2.958758e-47 |
MsaG015621 | MsaG045348 | 0.819965 | 1.541627e-52 | 3.387532e-50 |
MsaG015725 | MsaG045348 | 0.857091 | 4.021013e-62 | 2.803233e-59 |
MsaG015733 | MsaG045348 | 0.864113 | 3.059182e-64 | 2.789827e-61 |
MsaG015757 | MsaG045348 | 0.818968 | 2.595433e-52 | 5.555384e-50 |
MsaG015769 | MsaG045348 | 0.843518 | 2.489078e-58 | 1.086770e-55 |
MsaG016112 | MsaG045348 | 0.805000 | 2.785369e-49 | 4.222890e-47 |
MsaG018355 | MsaG045348 | 0.806752 | 1.197687e-49 | 1.892047e-47 |
MsaG019455 | MsaG045348 | 0.827071 | 3.415783e-54 | 9.100509e-52 |
MsaG020193 | MsaG045348 | 0.828586 | 1.482707e-54 | 4.121922e-52 |
MsaG020221 | MsaG045348 | 0.823558 | 2.294635e-53 | 5.550054e-51 |
MsaG021799 | MsaG045348 | 0.878292 | 6.625443e-69 | 1.105116e-65 |
MsaG022074 | MsaG045348 | 0.854081 | 3.007827e-61 | 1.880469e-58 |
MsaG022388 | MsaG045348 | 0.825788 | 6.881685e-54 | 1.769203e-51 |
MsaG022609 | MsaG045348 | 0.801886 | 1.222388e-48 | 1.724834e-46 |
MsaG022748 | MsaG045348 | 0.811037 | 1.465924e-50 | 2.567524e-48 |
MsaG023728 | MsaG045348 | 0.806194 | 1.568439e-49 | 2.445316e-47 |
MsaG023849 | MsaG045348 | 0.803407 | 5.956529e-49 | 8.703006e-47 |
MsaG024762 | MsaG045348 | 0.821372 | 7.350362e-53 | 1.676337e-50 |
MsaG025438 | MsaG045348 | 0.810281 | 2.131375e-50 | 3.664821e-48 |
MsaG025770 | MsaG045348 | 0.806502 | 1.352021e-49 | 2.123295e-47 |
MsaG026470 | MsaG045348 | 0.821004 | 8.926127e-53 | 2.016087e-50 |
MsaG027754 | MsaG045348 | 0.802173 | 1.068081e-48 | 1.516904e-46 |
MsaG028557 | MsaG045348 | 0.846360 | 4.292067e-59 | 2.057311e-56 |
MsaG028740 | MsaG045348 | 0.821559 | 6.656594e-53 | 1.525704e-50 |
MsaG028807 | MsaG045348 | 0.823252 | 2.703719e-53 | 6.485364e-51 |
MsaG028970 | MsaG045348 | 0.803302 | 6.260487e-49 | 9.124985e-47 |
MsaG030657 | MsaG045348 | 0.836188 | 1.979395e-56 | 6.870858e-54 |
MsaG030833 | MsaG045348 | 0.835089 | 3.745416e-56 | 1.257922e-53 |
MsaG031347 | MsaG045348 | 0.833216 | 1.098387e-55 | 3.489645e-53 |
MsaG031414 | MsaG045348 | 0.819120 | 2.397633e-52 | 5.152613e-50 |
MsaG032531 | MsaG045348 | 0.877358 | 1.399404e-68 | 2.236620e-65 |
MsaG033732 | MsaG045348 | 0.812131 | 8.499439e-51 | 1.529096e-48 |
MsaG033736 | MsaG045348 | 0.807991 | 6.562140e-50 | 1.067684e-47 |
MsaG033878 | MsaG045348 | 0.869949 | 4.289585e-66 | 4.960692e-63 |
MsaG034180 | MsaG045348 | 0.816136 | 1.120727e-51 | 2.229799e-49 |
MsaG034188 | MsaG045348 | 0.810123 | 2.304172e-50 | 3.946685e-48 |
MsaG034661 | MsaG045348 | 0.824052 | 1.759772e-53 | 4.313788e-51 |
MsaG034933 | MsaG045348 | 0.893503 | 1.320725e-74 | 4.690043e-71 |
MsaG035391 | MsaG045348 | 0.816865 | 7.707273e-52 | 1.562320e-49 |
MsaG036271 | MsaG045348 | 0.853988 | 3.198952e-61 | 1.993394e-58 |
MsaG036272 | MsaG045348 | 0.872838 | 4.801716e-67 | 6.281462e-64 |
MsaG036689 | MsaG045348 | 0.809073 | 3.864140e-50 | 6.452972e-48 |
MsaG037276 | MsaG045348 | 0.841850 | 6.872495e-58 | 2.844381e-55 |
MsaG037332 | MsaG045348 | 0.878710 | 4.731347e-69 | 8.045554e-66 |
MsaG037333 | MsaG045348 | 0.857863 | 2.381739e-62 | 1.708769e-59 |
MsaG037736 | MsaG045348 | 0.813250 | 4.850029e-51 | 8.972193e-49 |
MsaG038166 | MsaG045348 | 0.825190 | 9.519289e-54 | 2.407142e-51 |
MsaG038298 | MsaG045348 | 0.842047 | 6.099345e-58 | 2.540320e-55 |
MsaG038776 | MsaG045348 | 0.800740 | 2.093048e-48 | 2.877664e-46 |
MsaG039182 | MsaG045348 | 0.826442 | 4.820255e-54 | 1.262019e-51 |
MsaG040039 | MsaG045348 | 0.850651 | 2.821005e-60 | 1.563642e-57 |
MsaG040048 | MsaG045348 | 0.807321 | 9.090695e-50 | 1.455470e-47 |
MsaG040266 | MsaG045348 | 0.841693 | 7.556984e-58 | 3.111878e-55 |
MsaG040742 | MsaG045348 | 0.852242 | 1.005743e-60 | 5.892217e-58 |
MsaG040955 | MsaG045348 | 0.801537 | 1.440803e-48 | 2.016858e-46 |
MsaG041114 | MsaG045348 | 0.811925 | 9.417758e-51 | 1.685901e-48 |
MsaG041557 | MsaG045348 | 0.853749 | 3.743984e-61 | 2.313140e-58 |
MsaG041550 | MsaG045348 | 0.850897 | 2.406153e-60 | 1.345123e-57 |
MsaG041563 | MsaG045348 | 0.824704 | 1.238388e-53 | 3.090011e-51 |
MsaG041623 | MsaG045348 | 0.814970 | 2.031627e-51 | 3.924416e-49 |
MsaG041624 | MsaG045348 | 0.840743 | 1.339273e-57 | 5.351450e-55 |
MsaG041862 | MsaG045348 | 0.806341 | 1.461075e-49 | 2.285851e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG045348 | MtrunA17_Chr4g0062271 | 99.346 | 153 | 1 | 0 | 1 | 153 | 1 | 153 | 7.45e-113 | 316 |
MsaG045348 | MtrunA17_Chr2g0307551 | 86.275 | 153 | 21 | 0 | 1 | 153 | 1 | 153 | 5.32e-99 | 281 |
MsaG045348 | MtrunA17_Chr1g0185911 | 41.176 | 85 | 48 | 1 | 12 | 94 | 30 | 114 | 1.54e-17 | 75.1 |
MsaG045348 | MtrunA17_Chr7g0263601 | 37.500 | 80 | 50 | 0 | 12 | 91 | 27 | 106 | 5.73e-16 | 70.9 |
MsaG045348 | MtrunA17_Chr3g0102351 | 36.250 | 80 | 51 | 0 | 12 | 91 | 28 | 107 | 6.02e-16 | 71.2 |
MsaG045348 | MtrunA17_Chr4g0076381 | 37.037 | 81 | 51 | 0 | 11 | 91 | 58 | 138 | 1.08e-15 | 71.6 |
MsaG045348 | MtrunA17_Chr5g0446491 | 36.250 | 80 | 51 | 0 | 12 | 91 | 24 | 103 | 1.09e-15 | 70.5 |
MsaG045348 | MtrunA17_Chr1g0165041 | 28.723 | 94 | 67 | 0 | 6 | 99 | 1 | 94 | 4.87e-15 | 68.9 |
MsaG045348 | MtrunA17_Chr2g0296321 | 30.909 | 110 | 70 | 1 | 8 | 111 | 63 | 172 | 1.22e-14 | 68.9 |
MsaG045348 | MtrunA17_Chr2g0290491 | 32.530 | 83 | 56 | 0 | 7 | 89 | 13 | 95 | 2.40e-14 | 66.6 |
MsaG045348 | MtrunA17_Chr1g0191981 | 31.646 | 79 | 54 | 0 | 13 | 91 | 6 | 84 | 3.52e-14 | 65.1 |
MsaG045348 | MtrunA17_Chr4g0067091 | 34.615 | 78 | 51 | 0 | 12 | 89 | 23 | 100 | 3.97e-14 | 67.0 |
MsaG045348 | MtrunA17_Chr8g0384451 | 29.545 | 88 | 62 | 0 | 12 | 99 | 41 | 128 | 5.81e-14 | 66.2 |
MsaG045348 | MtrunA17_Chr8g0382931 | 32.143 | 84 | 57 | 0 | 5 | 88 | 22 | 105 | 1.05e-13 | 65.5 |
MsaG045348 | MtrunA17_Chr1g0195851 | 32.051 | 78 | 53 | 0 | 12 | 89 | 37 | 114 | 2.14e-13 | 64.7 |
MsaG045348 | MtrunA17_Chr4g0076321 | 35.135 | 74 | 48 | 0 | 16 | 89 | 24 | 97 | 4.53e-13 | 62.4 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG045348 | AT5G23090.5 | 85.235 | 149 | 21 | 1 | 1 | 149 | 1 | 148 | 8.56e-93 | 266 |
MsaG045348 | AT5G23090.2 | 85.235 | 149 | 21 | 1 | 1 | 149 | 1 | 148 | 8.56e-93 | 266 |
MsaG045348 | AT5G23090.1 | 85.235 | 149 | 21 | 1 | 1 | 149 | 1 | 148 | 8.56e-93 | 266 |
MsaG045348 | AT5G23090.4 | 82.468 | 154 | 24 | 2 | 1 | 152 | 1 | 153 | 2.86e-90 | 259 |
MsaG045348 | AT5G08190.1 | 88.652 | 141 | 16 | 0 | 1 | 141 | 1 | 141 | 3.21e-84 | 244 |
MsaG045348 | AT5G08190.2 | 87.943 | 141 | 16 | 1 | 1 | 141 | 1 | 140 | 1.45e-81 | 238 |
MsaG045348 | AT5G23090.3 | 77.181 | 149 | 20 | 2 | 1 | 149 | 1 | 135 | 5.14e-80 | 233 |
MsaG045348 | AT2G38880.7 | 31.068 | 103 | 71 | 0 | 12 | 114 | 22 | 124 | 4.48e-17 | 73.2 |
MsaG045348 | AT2G38880.3 | 31.429 | 105 | 71 | 1 | 12 | 116 | 22 | 125 | 1.67e-16 | 72.0 |
MsaG045348 | AT2G38880.11 | 34.409 | 93 | 59 | 1 | 12 | 102 | 22 | 114 | 1.98e-16 | 72.4 |
MsaG045348 | AT2G38880.8 | 34.409 | 93 | 59 | 1 | 12 | 102 | 22 | 114 | 1.98e-16 | 72.4 |
MsaG045348 | AT2G38880.2 | 32.381 | 105 | 69 | 1 | 12 | 114 | 22 | 126 | 2.01e-16 | 71.6 |
MsaG045348 | AT2G38880.1 | 32.381 | 105 | 69 | 1 | 12 | 114 | 22 | 126 | 2.01e-16 | 71.6 |
MsaG045348 | AT2G38880.5 | 32.381 | 105 | 69 | 1 | 12 | 114 | 22 | 126 | 2.01e-16 | 71.6 |
MsaG045348 | AT4G14540.1 | 31.000 | 100 | 69 | 0 | 12 | 111 | 22 | 121 | 2.50e-16 | 72.0 |
MsaG045348 | AT3G53340.5 | 35.000 | 100 | 64 | 1 | 12 | 111 | 30 | 128 | 5.67e-16 | 71.2 |
MsaG045348 | AT3G53340.1 | 35.000 | 100 | 64 | 1 | 12 | 111 | 30 | 128 | 5.67e-16 | 71.2 |
MsaG045348 | AT2G37060.2 | 36.250 | 80 | 51 | 0 | 12 | 91 | 31 | 110 | 6.66e-16 | 71.2 |
MsaG045348 | AT2G37060.3 | 36.250 | 80 | 51 | 0 | 12 | 91 | 31 | 110 | 6.66e-16 | 71.2 |
MsaG045348 | AT2G37060.1 | 36.250 | 80 | 51 | 0 | 12 | 91 | 31 | 110 | 6.66e-16 | 71.2 |
MsaG045348 | AT2G38880.4 | 35.294 | 85 | 53 | 1 | 12 | 94 | 22 | 106 | 8.17e-16 | 69.3 |
MsaG045348 | AT5G47640.1 | 30.631 | 111 | 76 | 1 | 12 | 122 | 28 | 137 | 9.53e-16 | 71.2 |
MsaG045348 | AT5G47670.2 | 37.037 | 81 | 51 | 0 | 11 | 91 | 29 | 109 | 1.70e-15 | 70.9 |
MsaG045348 | AT5G47670.1 | 37.037 | 81 | 51 | 0 | 11 | 91 | 58 | 138 | 2.43e-15 | 70.9 |
MsaG045348 | AT5G47670.3 | 37.037 | 81 | 51 | 0 | 11 | 91 | 58 | 138 | 2.43e-15 | 70.9 |
MsaG045348 | AT3G53340.4 | 36.250 | 80 | 51 | 0 | 12 | 91 | 30 | 109 | 7.90e-15 | 67.0 |
MsaG045348 | AT2G38880.9 | 31.250 | 96 | 66 | 0 | 12 | 107 | 22 | 117 | 1.76e-14 | 67.0 |
MsaG045348 | AT2G38880.10 | 31.250 | 96 | 66 | 0 | 12 | 107 | 22 | 117 | 1.76e-14 | 67.0 |
MsaG045348 | AT2G38880.6 | 31.250 | 96 | 66 | 0 | 12 | 107 | 22 | 117 | 1.76e-14 | 67.0 |
MsaG045348 | AT3G53340.3 | 32.955 | 88 | 59 | 0 | 12 | 99 | 30 | 117 | 2.45e-14 | 66.6 |
MsaG045348 | AT3G53340.2 | 32.955 | 88 | 59 | 0 | 12 | 99 | 30 | 117 | 2.45e-14 | 66.6 |
MsaG045348 | AT1G21970.1 | 32.099 | 81 | 55 | 0 | 11 | 91 | 59 | 139 | 4.84e-14 | 67.4 |
MsaG045348 | AT1G09030.1 | 31.250 | 80 | 55 | 0 | 12 | 91 | 4 | 83 | 1.56e-13 | 63.9 |
MsaG045348 | AT2G13570.1 | 32.468 | 77 | 52 | 0 | 12 | 88 | 37 | 113 | 6.61e-13 | 63.9 |
MsaG045348 | AT2G47810.1 | 30.263 | 76 | 53 | 0 | 12 | 87 | 52 | 127 | 1.06e-11 | 59.7 |
Find 37 sgRNAs with CRISPR-Local
Find sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTTCCTAGCTAATCTAATTT+TGG | 0.141370 | 8:-71598672 | None:intergenic |
ATACTTTAAAAGCTGGTAAA+TGG | 0.274950 | 8:+71598533 | MsaT045348.1:CDS |
TTTCCCCAGGTGCTTGGATT+TGG | 0.324476 | 8:+71597691 | MsaT045348.1:intron |
CAGCAAGATACTTTAAAAGC+TGG | 0.415421 | 8:+71598526 | MsaT045348.1:intron |
TGCGCCTGAGCACGTATTGA+AGG | 0.421286 | 8:+71596919 | MsaT045348.1:CDS |
AGCACTCGATCAATAGATCT+TGG | 0.421579 | 8:-71596145 | None:intergenic |
CTCTCTGCTACATACTTCAT+TGG | 0.429101 | 8:-71596882 | None:intergenic |
TATGTAGCAGAGAGGACAAA+AGG | 0.468267 | 8:+71596891 | MsaT045348.1:CDS |
GCACGTATTGAAGGCTCTAC+AGG | 0.479345 | 8:+71596928 | MsaT045348.1:CDS |
CGATTTGCCAACGATATCCA+TGG | 0.490386 | 8:-71595297 | None:intergenic |
GAGGCCCGCGCTAGGATGAA+TGG | 0.491671 | 8:+71598616 | MsaT045348.1:CDS |
CCCGCGCTAGGATGAATGGT+GGG | 0.499784 | 8:+71598620 | MsaT045348.1:CDS |
CTCGCCACGCGGACATCTTG+CGG | 0.511342 | 8:-71596116 | None:intergenic |
GCACTCGATCAATAGATCTT+GGG | 0.526789 | 8:-71596144 | None:intergenic |
AGGTTAAATTATGGATCCCA+TGG | 0.527047 | 8:+71595280 | None:intergenic |
CCCACCATTCATCCTAGCGC+GGG | 0.529331 | 8:-71598620 | None:intergenic |
AGAGCCTTCAATACGTGCTC+AGG | 0.530619 | 8:-71596923 | None:intergenic |
TGTTTGCAGAGGCCCGCGCT+AGG | 0.547845 | 8:+71598608 | MsaT045348.1:CDS |
CTATTGATCGAGTGCTGTGT+AGG | 0.564923 | 8:+71596152 | MsaT045348.1:CDS |
CCCCACCATTCATCCTAGCG+CGG | 0.565574 | 8:-71598621 | None:intergenic |
AAAGCTGGTAAATGGAGCAA+TGG | 0.581041 | 8:+71598541 | MsaT045348.1:CDS |
AGCATACGAACAACACAAGC+TGG | 0.587192 | 8:+71597738 | MsaT045348.1:CDS |
GTTTATAAATCTCATCTCAT+CGG | 0.592523 | 8:+71596856 | MsaT045348.1:CDS |
ATGGATCCCATGGATATCGT+TGG | 0.592534 | 8:+71595290 | MsaT045348.1:CDS |
GGATATCGTTGGCAAATCGA+AGG | 0.607995 | 8:+71595301 | MsaT045348.1:CDS |
GATTTGCCAACGATATCCAT+GGG | 0.608748 | 8:-71595296 | None:intergenic |
AAGCATTAGCAGAACAACAA+AGG | 0.632993 | 8:+71598584 | MsaT045348.1:CDS |
GCCCGCGCTAGGATGAATGG+TGG | 0.635837 | 8:+71598619 | MsaT045348.1:CDS |
ACAACACAAGCTGGAGACCA+TGG | 0.639569 | 8:+71597747 | MsaT045348.1:CDS |
GAAGATGCTTCGCTTCCCAA+AGG | 0.654221 | 8:+71595323 | MsaT045348.1:CDS |
ATTGCTTCAAAACAGCCAGA+TGG | 0.664023 | 8:+71598646 | MsaT045348.1:CDS |
CCGCGCTAGGATGAATGGTG+GGG | 0.672298 | 8:+71598621 | MsaT045348.1:CDS |
ACAACAAAGGATGTTTGCAG+AGG | 0.686768 | 8:+71598597 | MsaT045348.1:CDS |
CTTGGGTGTCTCTCGCCACG+CGG | 0.690389 | 8:-71596127 | None:intergenic |
CAATGAAGTATGTAGCAGAG+AGG | 0.698906 | 8:+71596883 | MsaT045348.1:CDS |
CAATGGAGCTGAGATGACTG+AGG | 0.705174 | 8:+71598558 | MsaT045348.1:CDS |
GTTACCGCAAGATGTCCGCG+TGG | 0.763213 | 8:+71596112 | MsaT045348.1:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr8 | gene | 71595290 | 71598681 | 71595290 | ID=MsaG045348 |
Chr8 | mRNA | 71595290 | 71598681 | 71595290 | ID=MsaT045348.1;Parent=MsaG045348 |
Chr8 | exon | 71595290 | 71595344 | 71595290 | ID=MsaT045348.1.exon1;Parent=MsaT045348.1 |
Chr8 | CDS | 71595290 | 71595344 | 71595290 | ID=cds.MsaT045348.1;Parent=MsaT045348.1 |
Chr8 | exon | 71596084 | 71596173 | 71596084 | ID=MsaT045348.1.exon2;Parent=MsaT045348.1 |
Chr8 | CDS | 71596084 | 71596173 | 71596084 | ID=cds.MsaT045348.1;Parent=MsaT045348.1 |
Chr8 | exon | 71596855 | 71596949 | 71596855 | ID=MsaT045348.1.exon3;Parent=MsaT045348.1 |
Chr8 | CDS | 71596855 | 71596949 | 71596855 | ID=cds.MsaT045348.1;Parent=MsaT045348.1 |
Chr8 | exon | 71597700 | 71597768 | 71597700 | ID=MsaT045348.1.exon4;Parent=MsaT045348.1 |
Chr8 | CDS | 71597700 | 71597768 | 71597700 | ID=cds.MsaT045348.1;Parent=MsaT045348.1 |
Chr8 | exon | 71598529 | 71598681 | 71598529 | ID=MsaT045348.1.exon5;Parent=MsaT045348.1 |
Chr8 | CDS | 71598529 | 71598681 | 71598529 | ID=cds.MsaT045348.1;Parent=MsaT045348.1 |
Gene Sequence |
Protein sequence |