AlfalfaGEDB | MsaG045856

M. sativa ssp. caerulea / MsaG045856

KEGG: -
GO: -
PFAM: PF00583.28

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG045856	XP_039689660.1	97.297	407	11	0	1	407	1	407	0.0	823

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG045856	sp\|Q42381\|HLS1_ARATH	35.817	416	232	14	12	407	3	403	9.81e-68	223

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG045856	tr\|A0A396IJ64\|A0A396IJ64_MEDTR	97.297	407	11	0	1	407	1	407	0.0	823

TFs/TRs:

Gene ID	Type	Classification
MsaG045856	TR	GNAT

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsaG000107	MsaG045856	0.805186	2.547596e-49	3.879126e-47
MsaG000431	MsaG045856	0.801744	1.306699e-48	1.837822e-46
MsaG000640	MsaG045856	0.806143	1.608169e-49	2.504099e-47
MsaG000717	MsaG045856	0.824471	1.404132e-53	3.481448e-51
MsaG000788	MsaG045856	0.810310	2.101604e-50	3.616167e-48
MsaG000888	MsaG045856	0.809446	3.217070e-50	5.421067e-48
MsaG001325	MsaG045856	0.831006	3.841182e-55	1.144163e-52
MsaG001531	MsaG045856	0.811862	9.718970e-51	1.737080e-48
MsaG001730	MsaG045856	0.851300	1.854829e-60	1.051386e-57
MsaG001939	MsaG045856	0.819957	1.547899e-52	3.400594e-50
MsaG002926	MsaG045856	0.828802	1.315096e-54	3.678085e-52
MsaG003180	MsaG045856	0.824897	1.115517e-53	2.798288e-51
MsaG003214	MsaG045856	0.802454	9.353335e-49	1.336994e-46
MsaG003422	MsaG045856	0.825829	6.730238e-54	1.732268e-51
MsaG003514	MsaG045856	0.869999	4.130641e-66	4.787086e-63
MsaG004006	MsaG045856	0.815720	1.386460e-51	2.729449e-49
MsaG004047	MsaG045856	0.814393	2.722315e-51	5.182785e-49
MsaG004107	MsaG045856	0.841692	7.561190e-58	3.113487e-55
MsaG004468	MsaG045856	0.816345	1.006790e-51	2.013803e-49
MsaG004500	MsaG045856	0.847807	1.730154e-59	8.705974e-57
MsaG004534	MsaG045856	0.856279	6.951713e-62	4.705084e-59
MsaG004621	MsaG045856	0.867514	2.607188e-65	2.726339e-62
MsaG005100	MsaG045856	0.819647	1.820402e-52	3.966346e-50
MsaG005114	MsaG045856	0.813238	4.876986e-51	9.019779e-49
MsaG005496	MsaG045856	0.816902	7.564652e-52	1.534881e-49
MsaG005497	MsaG045856	0.816362	9.982494e-52	1.997551e-49
MsaG005526	MsaG045856	0.836131	2.046865e-56	7.092891e-54
MsaG005754	MsaG045856	0.819833	1.652099e-52	3.617354e-50
MsaG005764	MsaG045856	0.809065	3.879131e-50	6.476827e-48
MsaG005807	MsaG045856	0.841332	9.395336e-58	3.824729e-55
MsaG006468	MsaG045856	0.830954	3.955877e-55	1.176540e-52
MsaG006500	MsaG045856	0.826679	4.234078e-54	1.115827e-51
MsaG006777	MsaG045856	0.807730	7.450793e-50	1.204692e-47
MsaG007442	MsaG045856	0.804400	3.712612e-49	5.550705e-47
MsaG007828	MsaG045856	0.808356	5.490532e-50	9.011665e-48
MsaG007914	MsaG045856	0.829298	9.984374e-55	2.831901e-52
MsaG008218	MsaG045856	0.810182	2.238640e-50	3.839864e-48
MsaG008356	MsaG045856	0.816393	9.821467e-52	1.966911e-49
MsaG008619	MsaG045856	0.812655	6.537023e-51	1.191489e-48
MsaG008678	MsaG045856	0.809297	3.461430e-50	5.811361e-48
MsaG009389	MsaG045856	0.816157	1.108899e-51	2.207438e-49
MsaG009655	MsaG045856	0.871166	1.715649e-66	2.088768e-63
MsaG010394	MsaG045856	0.805169	2.568406e-49	3.909318e-47
MsaG010564	MsaG045856	0.808419	5.323327e-50	8.750698e-48
MsaG011080	MsaG045856	0.818835	2.781756e-52	5.933207e-50
MsaG011560	MsaG045856	0.825557	7.803965e-54	1.993426e-51
MsaG011584	MsaG045856	0.805086	2.673190e-49	4.060843e-47
MsaG011603	MsaG045856	0.848639	1.021736e-59	5.286735e-57
MsaG011873	MsaG045856	0.839478	2.854462e-57	1.096230e-54
MsaG012190	MsaG045856	0.812426	7.331207e-51	1.328704e-48
MsaG012424	MsaG045856	0.804909	2.909870e-49	4.402245e-47
MsaG042408	MsaG045856	0.837781	7.791394e-57	2.838449e-54
MsaG043659	MsaG045856	0.836983	1.245023e-56	4.426179e-54
MsaG043668	MsaG045856	0.813632	4.001013e-51	7.472834e-49
MsaG043788	MsaG045856	0.819268	2.219292e-52	4.787932e-50
MsaG044182	MsaG045856	0.805289	2.424870e-49	3.700963e-47
MsaG044278	MsaG045856	0.824500	1.382283e-53	3.430040e-51
MsaG044453	MsaG045856	0.811679	1.064653e-50	1.894305e-48
MsaG044516	MsaG045856	0.808791	4.437336e-50	7.360015e-48
MsaG044584	MsaG045856	0.820509	1.158201e-52	2.581873e-50
MsaG044688	MsaG045856	0.811148	1.387297e-50	2.436394e-48
MsaG044693	MsaG045856	0.802382	9.676737e-49	1.380952e-46
MsaG044722	MsaG045856	0.834299	5.905626e-56	1.937171e-53
MsaG044889	MsaG045856	0.825205	9.445325e-54	2.389353e-51
MsaG044928	MsaG045856	0.847655	1.903879e-59	9.530250e-57
MsaG045636	MsaG045856	0.816490	9.346908e-52	1.876517e-49
MsaG045729	MsaG045856	0.827357	2.920292e-54	7.842974e-52
MsaG045743	MsaG045856	0.841504	8.469477e-58	3.466820e-55
MsaG045819	MsaG045856	0.826118	5.749597e-54	1.491819e-51
MsaG045824	MsaG045856	0.860574	3.698103e-63	2.939241e-60
MsaG045856	MsaG045832	0.809001	4.003956e-50	6.674857e-48
MsaG045856	MsaG046090	0.861904	1.461290e-63	1.221896e-60
MsaG045856	MsaG046488	0.811035	1.467137e-50	2.569556e-48
MsaG045856	MsaG046730	0.833113	1.164259e-55	3.687779e-53
MsaG045856	MsaG002316	0.844672	1.224950e-58	5.552674e-56
MsaG045856	MsaG002654	0.808067	6.322277e-50	1.030525e-47
MsaG045856	MsaG001808	0.841890	6.707325e-58	2.779649e-55
MsaG045856	MsaG001987	0.800046	2.893799e-48	3.916613e-46
MsaG045856	MsaG005167	0.860724	3.330532e-63	2.662333e-60
MsaG045856	MsaG001893	0.847523	2.069425e-59	1.031352e-56
MsaG045856	MsaG009209	0.800659	2.173375e-48	2.982717e-46
MsaG045856	MsaG007590	0.827445	2.781862e-54	7.489706e-52
MsaG045856	MsaG012744	0.833370	1.005749e-55	3.209579e-53
MsaG045856	MsaG012946	0.812747	6.243034e-51	1.140524e-48
MsaG045856	MsaG011495	0.803094	6.909761e-49	1.002326e-46
MsaG045856	MsaG012091	0.804030	4.428160e-49	6.564321e-47
MsaG045856	MsaG018864	0.808115	6.177100e-50	1.008021e-47
MsaG045856	MsaG023445	0.829038	1.153825e-54	3.248552e-52
MsaG045856	MsaG020399	0.833369	1.006129e-55	3.210743e-53
MsaG045856	MsaG018912	0.806017	1.708925e-49	2.652988e-47
MsaG045856	MsaG017935	0.825815	6.783925e-54	1.745394e-51
MsaG045856	MsaG028734	0.844381	1.465498e-58	6.579590e-56
MsaG045856	MsaG029782	0.801890	1.220440e-48	1.722225e-46
MsaG045856	MsaG029390	0.821271	7.750559e-53	1.763016e-50
MsaG045856	MsaG028903	0.853271	5.127759e-61	3.114841e-58
MsaG045856	MsaG026407	0.810107	2.322470e-50	3.976465e-48
MsaG045856	MsaG031891	0.800680	2.152697e-48	2.955715e-46
MsaG045856	MsaG031280	0.826490	4.693712e-54	1.230521e-51
MsaG045856	MsaG033836	0.800924	1.920131e-48	2.650815e-46
MsaG045856	MsaG032261	0.814932	2.071672e-51	3.997825e-49
MsaG045856	MsaG033082	0.872673	5.447576e-67	7.075866e-64
MsaG045856	MsaG032931	0.828099	1.940052e-54	5.320218e-52
MsaG045856	MsaG032525	0.814153	3.074485e-51	5.817830e-49
MsaG045856	MsaG031638	0.828330	1.708259e-54	4.714899e-52
MsaG045856	MsaG036672	0.802632	8.597186e-49	1.233952e-46
MsaG045856	MsaG035600	0.802432	9.449224e-49	1.350021e-46
MsaG045856	MsaG037726	0.835956	2.265611e-56	7.809374e-54
MsaG045856	MsaG036651	0.858391	1.661892e-62	1.216032e-59
MsaG045856	MsaG042585	0.873392	3.136224e-67	4.203129e-64
MsaG045856	MsaG043047	0.836301	1.853367e-56	6.455434e-54
MsaG013085	MsaG045856	0.819905	1.590339e-52	3.488935e-50
MsaG014855	MsaG045856	0.815611	1.465732e-51	2.877608e-49
MsaG014856	MsaG045856	0.802524	9.047570e-49	1.295375e-46
MsaG015018	MsaG045856	0.806075	1.661774e-49	2.583441e-47
MsaG015485	MsaG045856	0.818170	3.929220e-52	8.237421e-50
MsaG016215	MsaG045856	0.836844	1.350252e-56	4.780377e-54
MsaG017068	MsaG045856	0.856728	5.139974e-62	3.536131e-59
MsaG017081	MsaG045856	0.802003	1.157135e-48	1.637010e-46
MsaG017324	MsaG045856	0.857914	2.301043e-62	1.654021e-59
MsaG017702	MsaG045856	0.819820	1.663314e-52	3.640602e-50
MsaG017842	MsaG045856	0.823706	2.119075e-53	5.146281e-51
MsaG017873	MsaG045856	0.821951	5.406465e-53	1.252163e-50
MsaG018078	MsaG045856	0.800531	2.307820e-48	3.157974e-46
MsaG018644	MsaG045856	0.802062	1.125445e-48	1.594343e-46
MsaG018754	MsaG045856	0.837366	9.941830e-57	3.576103e-54
MsaG019223	MsaG045856	0.808807	4.402750e-50	7.305518e-48
MsaG019237	MsaG045856	0.845601	6.886705e-59	3.218902e-56
MsaG019356	MsaG045856	0.830456	5.229801e-55	1.533337e-52
MsaG019577	MsaG045856	0.835972	2.245389e-56	7.743222e-54
MsaG019944	MsaG045856	0.824015	1.794766e-53	4.395284e-51
MsaG019950	MsaG045856	0.800913	1.929859e-48	2.663557e-46
MsaG019977	MsaG045856	0.834499	5.263112e-56	1.736760e-53
MsaG020021	MsaG045856	0.813982	3.351965e-51	6.315984e-49
MsaG020078	MsaG045856	0.811234	1.328658e-50	2.338414e-48
MsaG020182	MsaG045856	0.801556	1.427993e-48	1.999782e-46
MsaG020233	MsaG045856	0.800387	2.468561e-48	3.366945e-46
MsaG020371	MsaG045856	0.802587	8.784015e-49	1.259449e-46
MsaG020733	MsaG045856	0.813557	4.154919e-51	7.745920e-49
MsaG021200	MsaG045856	0.825220	9.370401e-54	2.371378e-51
MsaG021683	MsaG045856	0.803422	5.913421e-49	8.642998e-47
MsaG023188	MsaG045856	0.814835	2.176132e-51	4.189165e-49
MsaG023924	MsaG045856	0.886117	9.774193e-72	2.365659e-68
MsaG024010	MsaG045856	0.824836	1.153137e-53	2.887733e-51
MsaG024061	MsaG045856	0.825338	8.788822e-54	2.231494e-51
MsaG024295	MsaG045856	0.818234	3.801078e-52	7.981860e-50
MsaG024382	MsaG045856	0.805817	1.881643e-49	2.907488e-47
MsaG025153	MsaG045856	0.810665	1.762984e-50	3.059803e-48
MsaG026124	MsaG045856	0.855270	1.366163e-61	8.912394e-59
MsaG026686	MsaG045856	0.816624	8.725428e-52	1.757737e-49
MsaG026738	MsaG045856	0.840862	1.246827e-57	5.000750e-55
MsaG026985	MsaG045856	0.809130	3.756974e-50	6.282761e-48
MsaG026987	MsaG045856	0.817159	6.627174e-52	1.353634e-49
MsaG027170	MsaG045856	0.805470	2.222793e-49	3.406842e-47
MsaG027376	MsaG045856	0.824839	1.151090e-53	2.882896e-51
MsaG027364	MsaG045856	0.849728	5.104148e-60	2.740799e-57
MsaG027457	MsaG045856	0.827595	2.562146e-54	6.927423e-52
MsaG027511	MsaG045856	0.848942	8.427587e-60	4.405786e-57
MsaG027681	MsaG045856	0.835477	2.992461e-56	1.016803e-53
MsaG027776	MsaG045856	0.835263	3.387113e-56	1.143449e-53
MsaG027984	MsaG045856	0.815235	1.775525e-51	3.452744e-49
MsaG028193	MsaG045856	0.859059	1.052059e-62	7.892963e-60
MsaG028335	MsaG045856	0.811250	1.318343e-50	2.321133e-48
MsaG028679	MsaG045856	0.839034	3.715614e-57	1.407336e-54
MsaG029307	MsaG045856	0.817924	4.462573e-52	9.296409e-50
MsaG029801	MsaG045856	0.814890	2.115397e-51	4.077987e-49
MsaG029802	MsaG045856	0.871661	1.179152e-66	1.466298e-63
MsaG029889	MsaG045856	0.814418	2.688958e-51	5.122464e-49
MsaG029963	MsaG045856	0.832426	1.721625e-55	5.344456e-53
MsaG031043	MsaG045856	0.822718	3.595275e-53	8.500386e-51
MsaG032373	MsaG045856	0.830979	3.899134e-55	1.160521e-52
MsaG032741	MsaG045856	0.802662	8.475677e-49	1.217349e-46
MsaG032901	MsaG045856	0.835519	2.919971e-56	9.934252e-54
MsaG032947	MsaG045856	0.816258	1.052963e-51	2.101463e-49
MsaG034147	MsaG045856	0.808513	5.083402e-50	8.375394e-48
MsaG034741	MsaG045856	0.806117	1.628307e-49	2.533923e-47
MsaG034977	MsaG045856	0.866384	5.952478e-65	5.944634e-62
MsaG035156	MsaG045856	0.833698	8.337154e-56	2.686511e-53
MsaG035532	MsaG045856	0.838129	6.349686e-57	2.338073e-54
MsaG035552	MsaG045856	0.803790	4.965596e-49	7.319740e-47
MsaG035682	MsaG045856	0.829370	9.595838e-55	2.727356e-52
MsaG036065	MsaG045856	0.822460	4.126090e-53	9.687478e-51
MsaG036288	MsaG045856	0.823017	3.065378e-53	7.306320e-51
MsaG038421	MsaG045856	0.819134	2.380221e-52	5.117073e-50
MsaG039178	MsaG045856	0.812272	7.918621e-51	1.429621e-48
MsaG039487	MsaG045856	0.851360	1.784564e-60	1.013583e-57
MsaG039489	MsaG045856	0.833309	1.041254e-55	3.316936e-53
MsaG039599	MsaG045856	0.805510	2.180866e-49	3.345666e-47
MsaG040670	MsaG045856	0.815454	1.588093e-51	3.105405e-49
MsaG040714	MsaG045856	0.800578	2.257366e-48	3.092284e-46
MsaG041721	MsaG045856	0.801743	1.307832e-48	1.839349e-46

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG045856	MtrunA17_Chr4g0068331	97.297	407	11	0	1	407	1	407	0.0	823
MsaG045856	MtrunA17_Chr3g0105631	37.037	405	219	15	13	406	8	387	2.22e-72	231
MsaG045856	MtrunA17_Chr4g0001411	34.390	410	239	11	8	407	20	409	2.62e-63	209
MsaG045856	MtrunA17_Chr4g0053961	33.571	420	241	12	11	407	7	411	3.01e-62	206
MsaG045856	MtrunA17_Chr5g0401351	33.976	415	242	12	7	406	5	402	2.95e-60	201

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG045856	AT4G37580.1	35.817	416	232	14	12	407	3	403	9.97e-69	223
MsaG045856	AT2G23060.1	33.570	423	241	13	11	407	5	413	1.23e-65	215
MsaG045856	AT4G37580.2	33.994	353	204	10	74	407	4	346	7.75e-54	182
MsaG045856	AT2G30090.1	34.390	410	214	20	13	406	15	385	1.74e-53	182
MsaG045856	AT5G67430.1	33.007	409	230	13	11	406	8	385	3.37e-52	179
MsaG045856	AT5G67430.2	31.861	317	196	8	91	406	23	320	3.87e-38	140
MsaG045856	AT2G23060.2	30.208	288	188	7	124	407	1	279	9.23e-36	133

Find 85 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AAAAGTGTGCAAACTCCTTC+TGG	0.261524	8:+77609611	MsaT045856.1:CDS
GAGCTTGTTGGAGTTGTTAA+AGG	0.270934	8:+77609581	MsaT045856.1:CDS
GATTAATGGGACTACTAAAA+AGG	0.272190	8:+77609294	MsaT045856.1:CDS
AGGGTTGTTATAACTGAGTT+AGG	0.299823	8:+77610640	MsaT045856.1:CDS
GTGACCCTTTATCTAGGATT+AGG	0.304028	8:+77609350	MsaT045856.1:CDS
AGTTGCATTTGTTGGTGAAT+AGG	0.308058	8:-77610057	None:intergenic
TTTCAAGATTCTTGTGTAGA+AGG	0.309351	8:-77610194	None:intergenic
AGAAACTGTACTGAGATTAA+TGG	0.318075	8:+77609280	MsaT045856.1:CDS
TAGAACCTAATCCTAGATAA+AGG	0.318214	8:-77609355	None:intergenic
ATCTAATGGATACAACTCTT+TGG	0.333407	8:-77610218	None:intergenic
GTTGGTGAATAGGTTATTAG+AGG	0.345184	8:-77610047	None:intergenic
TTCTTAGAAATGTGGTTTGT+TGG	0.348075	8:-77610130	None:intergenic
ATGTGTAACAACAGTACATT+TGG	0.356097	8:+77610511	MsaT045856.1:CDS
GAAACTGTACTGAGATTAAT+GGG	0.378728	8:+77609281	MsaT045856.1:CDS
AGAATAATGTCCATATCTAA+TGG	0.380464	8:-77610232	None:intergenic
GCGGGCTAATGGAATCAATA+TGG	0.381668	8:+77610578	MsaT045856.1:CDS
AGAGAATCTTGGCGGGCTAA+TGG	0.382594	8:+77610567	MsaT045856.1:CDS
TCTTAGAAATGTGGTTTGTT+GGG	0.383397	8:-77610129	None:intergenic
GTTATAACTGAGTTAGGGTT+TGG	0.401121	8:+77610646	MsaT045856.1:CDS
TTCAAGATGGGTTGTATACT+AGG	0.416953	8:+77609641	MsaT045856.1:CDS
TGATGATGAAAATGATGAAT+TGG	0.425086	8:+77610756	MsaT045856.1:CDS
TGGAGGTTTACATCAAGATT+AGG	0.428439	8:+77610598	MsaT045856.1:CDS
CATGATAATTACCTGTGTAT+AGG	0.429059	8:-77609677	None:intergenic
TTCTGGATCACTCTTCAAGA+TGG	0.429973	8:+77609628	MsaT045856.1:CDS
ATTGAAATAGTTGCATTTGT+TGG	0.433692	8:-77610065	None:intergenic
GTTGAAAACAAGGAGCTTGT+TGG	0.434978	8:+77609569	MsaT045856.1:CDS
AGAGTTGTATCCATTAGATA+TGG	0.437070	8:+77610222	MsaT045856.1:CDS
AAATTTACTGTGCAGGAGAA+AGG	0.442722	8:+77609931	MsaT045856.1:intron
GTAATGGTGACCCTTTATCT+AGG	0.452354	8:+77609344	MsaT045856.1:CDS
GGAATGTGTTTGTTGATCCT+AGG	0.455878	8:+77610803	MsaT045856.1:CDS
CAAAATTATTTCAACCACTT+AGG	0.457975	8:+77610422	MsaT045856.1:CDS
GGGTTGTTATAACTGAGTTA+GGG	0.463044	8:+77610641	MsaT045856.1:CDS
CTATCCCCTTCGTGTTATGT+TGG	0.463391	8:+77609375	MsaT045856.1:CDS
TAGCATCCACTCTTCAATTG+AGG	0.471060	8:-77609975	None:intergenic
GTTAGTTATTACAAAGATGA+AGG	0.474099	8:+77610283	MsaT045856.1:CDS
CATGGAGAGGGAGAGAATCT+TGG	0.478715	8:+77610556	MsaT045856.1:CDS
TGTGTATAGGAGAGACTCTA+AGG	0.479289	8:-77609664	None:intergenic
AATAACTAACCCAAGTTCCT+AGG	0.480250	8:-77610270	None:intergenic
TCTGGATCACTCTTCAAGAT+GGG	0.484366	8:+77609629	MsaT045856.1:CDS
GATAGAGACGTTAAAGTGGT+GGG	0.487062	8:+77609247	MsaT045856.1:CDS
GAATGTGTTTGTTGATCCTA+GGG	0.487462	8:+77610804	MsaT045856.1:CDS
AGAACCTAATCCTAGATAAA+GGG	0.491131	8:-77609354	None:intergenic
CACGACATAGAATCAATTTG+AGG	0.498622	8:-77610691	None:intergenic
AATTTACTGTGCAGGAGAAA+GGG	0.506218	8:+77609932	MsaT045856.1:intron
TGTGTAACAACAGTACATTT+GGG	0.506653	8:+77610512	MsaT045856.1:CDS
AACAAACCACATTTCTAAGA+AGG	0.512894	8:+77610132	MsaT045856.1:CDS
TTGGGAAACTAGTTGGTGGA+TGG	0.520506	8:-77610111	None:intergenic
TTCACCAACATGATGAGTAA+TGG	0.521767	8:+77609328	MsaT045856.1:CDS
CTTTATGGACTTCATGGAGA+GGG	0.530822	8:+77610544	MsaT045856.1:CDS
TGGTTTGTTGGGAAACTAGT+TGG	0.533846	8:-77610118	None:intergenic
AGCTGAGATGGTTGAAAACA+AGG	0.541254	8:+77609559	MsaT045856.1:CDS
AAAGTACAACAAGCTCATCA+TGG	0.542735	8:+77610341	MsaT045856.1:CDS
AAAACTCAGCCTAGGAACTT+GGG	0.550630	8:+77610261	MsaT045856.1:CDS
TTTGTTGGGAAACTAGTTGG+TGG	0.550774	8:-77610115	None:intergenic
TGACATCCTTCTTAGAAATG+TGG	0.553319	8:-77610138	None:intergenic
TGATGAAAATGATGAATTGG+TGG	0.563601	8:+77610759	MsaT045856.1:CDS
TGAGGAACATGGTTTACAAG+TGG	0.564375	8:-77610673	None:intergenic
ATAGAGACGTTAAAGTGGTG+GGG	0.567023	8:+77609248	MsaT045856.1:CDS
GGAGAGGGAGAGAATCTTGG+CGG	0.572469	8:+77610559	MsaT045856.1:CDS
GAAGAGTGGATGCTAAGAAA+TGG	0.583171	8:+77609983	MsaT045856.1:CDS
TGAAGATAGAGACGTTAAAG+TGG	0.583839	8:+77609243	MsaT045856.1:CDS
TAGAATCAATTTGAGGAACA+TGG	0.588050	8:-77610684	None:intergenic
AGATAGAGACGTTAAAGTGG+TGG	0.592949	8:+77609246	MsaT045856.1:CDS
CTGTGCAGGAGAAAGGGAGT+TGG	0.597746	8:+77609938	MsaT045856.1:intron
GTCGCATGAAGAAACCTAAG+TGG	0.602408	8:-77610436	None:intergenic
TGCGACATTAAATCATGCAA+AGG	0.605817	8:+77610453	MsaT045856.1:CDS
TGGCCTGCAGGTAGCTGAGA+TGG	0.614618	8:+77609547	MsaT045856.1:intron
GAGAGGGAGAGAATCTTGGC+GGG	0.615284	8:+77610560	MsaT045856.1:CDS
GAGGTGATGAAGAGACAACT+CGG	0.616820	8:+77610781	MsaT045856.1:CDS
ACACACCAACATAACACGAA+GGG	0.618929	8:-77609380	None:intergenic
GTCACCATTACTCATCATGT+TGG	0.630070	8:-77609332	None:intergenic
TTGTAACCTCAATTGAAGAG+TGG	0.632770	8:+77609969	MsaT045856.1:CDS
CACATACAGTATAGAGAGCG+AGG	0.638269	8:+77609201	MsaT045856.1:CDS
TGTCGTGTATTGATGATATG+TGG	0.645905	8:+77610707	MsaT045856.1:CDS
AGGTGATGAAGAGACAACTC+GGG	0.647405	8:+77610782	MsaT045856.1:CDS
TCTTTATGGACTTCATGGAG+AGG	0.647924	8:+77610543	MsaT045856.1:CDS
TGAAAATGATGAATTGGTGG+AGG	0.648658	8:+77610762	MsaT045856.1:CDS
TTAGAGTCTCTCCTATACAC+AGG	0.650718	8:+77609666	MsaT045856.1:CDS
GAGACGTTAAAGTGGTGGGG+AGG	0.666370	8:+77609251	MsaT045856.1:CDS
CACACCAACATAACACGAAG+GGG	0.668902	8:-77609379	None:intergenic
TACACACCAACATAACACGA+AGG	0.672948	8:-77609381	None:intergenic
GGCTAATGGAATCAATATGG+AGG	0.674786	8:+77610581	MsaT045856.1:CDS
ATGGAGATATATGATGAGTG+AGG	0.681980	8:-77610092	None:intergenic
GAGTCAAACATTCTCAAACA+AGG	0.685595	8:-77610487	None:intergenic
ATCTTGAAGAGTGATCCAGA+AGG	0.751962	8:-77609626	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content

Chromosome	Type	Strat	End	Strand	Name
Chr8	gene	77609193	77610834	77609193	ID=MsaG045856
Chr8	mRNA	77609193	77610834	77609193	ID=MsaT045856.1;Parent=MsaG045856
Chr8	exon	77609193	77609396	77609193	ID=MsaT045856.1.exon1;Parent=MsaT045856.1
Chr8	CDS	77609193	77609396	77609193	ID=cds.MsaT045856.1;Parent=MsaT045856.1
Chr8	exon	77609557	77609687	77609557	ID=MsaT045856.1.exon2;Parent=MsaT045856.1
Chr8	CDS	77609557	77609687	77609557	ID=cds.MsaT045856.1;Parent=MsaT045856.1
Chr8	exon	77609946	77610834	77609946	ID=MsaT045856.1.exon3;Parent=MsaT045856.1
Chr8	CDS	77609946	77610834	77609946	ID=cds.MsaT045856.1;Parent=MsaT045856.1

Gene Sequence

>MsaT045856.1

ATGGCTGACACATACAGTATAGAGAGCGAGGTTGTTATAAGAGAGTTTGATGAAGATAGAGACGTTAAAGTGGTGGGGAGGCTTGAAAGAAACTGTACTGAGATTAATGGGACTACTAAAAAGGGTTTATCTATTTTCACCAACATGATGAGTAATGGTGACCCTTTATCTAGGATTAGGTTCTATCCCCTTCGTGTTATGTTGGTAGCTGAGATGGTTGAAAACAAGGAGCTTGTTGGAGTTGTTAAAGGATGCATTAAAAGTGTGCAAACTCCTTCTGGATCACTCTTCAAGATGGGTTGTATACTAGGCCTTAGAGTCTCTCCTATACACAGGAGAAAGGGAGTTGGACTAAAACTTGTAACCTCAATTGAAGAGTGGATGCTAAGAAATGGTGCTGATTATGCCTTCCTAGCCACAGAAAAGAATAACAATGCCTCTAATAACCTATTCACCAACAAATGCAACTATTTCAATCTCACCTCACTCATCATATATCTCCATCCACCAACTAGTTTCCCAACAAACCACATTTCTAAGAAGGATGTCAAAATTGACAAGATAAATATAGATCAAGCAATTTCCTTCTACACAAGAATCTTGAAAACCAAAGAGTTGTATCCATTAGATATGGACATTATTCTCAAAGAAAAACTCAGCCTAGGAACTTGGGTTAGTTATTACAAAGATGAAGGCTTCAAACTCAACATTGAAGATATTATTACCCATAAAAGTACAACAAGCTCATCATGGATCATTTTCAGTTTATGGAATACTTGTGAAGCTTGTGACAATAACCTTCAAGTTAAAACAAAATTATTTCAACCACTTAGGTTTCTTCATGCGACATTAAATCATGCAAAGGACAAAATATGTCCTTGTTTGAGAATGTTTGACTCAATGTGTAACAACAGTACATTTGGGTTTCTTTTTCTTTATGGACTTCATGGAGAGGGAGAGAATCTTGGCGGGCTAATGGAATCAATATGGAGGTTTACATCAAGATTAGGAGAAAAATTAAAGGAGTGTAGGGTTGTTATAACTGAGTTAGGGTTTGGTGATCCACTTGTAAACCATGTTCCTCAAATTGATTCTATGTCGTGTATTGATGATATGTGGTACACAAAAAGACTTGGAAATCACAGTGATGATGAAAATGATGAATTGGTGGAGGTGATGAAGAGACAACTCGGGAATGTGTTTGTTGATCCTAGGGATTTTTAG

Protein sequence

>MsaT045856.1

MADTYSIESEVVIREFDEDRDVKVVGRLERNCTEINGTTKKGLSIFTNMMSNGDPLSRIRFYPLRVMLVAEMVENKELVGVVKGCIKSVQTPSGSLFKMGCILGLRVSPIHRRKGVGLKLVTSIEEWMLRNGADYAFLATEKNNNASNNLFTNKCNYFNLTSLIIYLHPPTSFPTNHISKKDVKIDKINIDQAISFYTRILKTKELYPLDMDIILKEKLSLGTWVSYYKDEGFKLNIEDIITHKSTTSSSWIIFSLWNTCEACDNNLQVKTKLFQPLRFLHATLNHAKDKICPCLRMFDSMCNNSTFGFLFLYGLHGEGENLGGLMESIWRFTSRLGEKLKECRVVITELGFGDPLVNHVPQIDSMSCIDDMWYTKRLGNHSDDENDELVEVMKRQLGNVFVDPRDF*