AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa ssp. caerulea / MsaG046067

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG046067 MtrunA17_Chr4g0055451 69.364 173 29 3 17 179 64 222 3.98e-75 228
MsaG046067 MtrunA17_Chr4g0055431 67.630 173 32 3 17 179 70 228 9.53e-72 219
MsaG046067 MtrunA17_Chr8g0381821 64.740 173 37 3 17 179 63 221 1.22e-70 217
MsaG046067 MtrunA17_Chr4g0045371 63.006 173 40 3 17 179 82 240 7.15e-69 213
MsaG046067 MtrunA17_Chr1g0162301 64.242 165 35 3 17 171 83 233 1.71e-67 209
MsaG046067 MtrunA17_Chr2g0277501 62.069 174 42 3 17 180 63 222 2.06e-67 209
MsaG046067 MtrunA17_Chr8g0385281 62.069 174 42 3 17 180 64 223 3.05e-67 209
MsaG046067 MtrunA17_Chr5g0399911 61.850 173 42 3 17 179 78 236 4.55e-67 208
MsaG046067 MtrunA17_Chr3g0131061 61.494 174 43 3 17 180 63 222 3.09e-66 206
MsaG046067 MtrunA17_Chr3g0123791 61.850 173 42 3 17 179 64 222 6.23e-66 205
MsaG046067 MtrunA17_Chr5g0426521 60.345 174 45 3 17 180 63 222 2.95e-65 203
MsaG046067 MtrunA17_Chr8g0374571 59.538 173 46 3 17 179 82 240 3.49e-65 204
MsaG046067 MtrunA17_Chr5g0402661 57.803 173 49 3 17 179 77 235 2.70e-63 199
MsaG046067 MtrunA17_Chr8g0380661 48.851 174 62 4 17 180 63 219 1.84e-49 162
MsaG046067 MtrunA17_Chr2g0302431 38.125 160 70 5 19 167 85 226 7.64e-27 105
MsaG046067 MtrunA17_Chr8g0346081 40.373 161 65 6 15 161 76 219 1.87e-26 103
MsaG046067 MtrunA17_Chr8g0346071 39.752 161 66 6 15 161 76 219 2.32e-26 103
MsaG046067 MtrunA17_Chr5g0432491 38.857 175 80 5 8 169 75 235 3.96e-26 103
MsaG046067 MtrunA17_Chr6g0468751 38.415 164 75 3 19 172 84 231 5.86e-26 103
MsaG046067 MtrunA17_Chr6g0453681 38.415 164 75 3 19 172 84 231 5.88e-26 103
MsaG046067 MtrunA17_Chr4g0013131 39.264 163 71 6 19 169 77 223 4.29e-25 100
MsaG046067 MtrunA17_Chr3g0132671 37.888 161 74 5 19 169 114 258 6.48e-25 100
MsaG046067 MtrunA17_Chr2g0304111 41.176 153 65 4 19 160 88 226 1.67e-24 99.0
MsaG046067 MtrunA17_Chr7g0244521 38.889 162 73 5 19 169 77 223 2.05e-24 98.6
MsaG046067 MtrunA17_Chr5g0428031 41.558 154 61 5 19 160 74 210 3.14e-24 98.2
MsaG046067 MtrunA17_Chr4g0001331 38.788 165 75 5 17 170 83 232 1.10e-23 96.7
MsaG046067 MtrunA17_Chr1g0150321 39.610 154 67 5 17 159 76 214 3.36e-23 95.1
MsaG046067 MtrunA17_Chr4g0069301 38.462 169 73 6 12 167 82 232 5.36e-23 94.7
MsaG046067 MtrunA17_Chr3g0107051 39.506 162 72 6 19 169 86 232 2.56e-22 92.8
MsaG046067 MtrunA17_Chr1g0188031 35.849 159 75 4 15 160 81 225 4.77e-22 92.0
MsaG046067 MtrunA17_Chr5g0441011 39.103 156 66 5 19 161 78 217 5.17e-22 91.7
MsaG046067 MtrunA17_Chr4g0063881 36.000 175 77 7 11 169 66 221 5.56e-22 91.7
MsaG046067 MtrunA17_Chr4g0074111 37.342 158 63 6 19 160 83 220 2.61e-21 89.4
MsaG046067 MtrunA17_Chr3g0114511 33.333 180 86 7 6 170 82 242 4.06e-21 89.4
MsaG046067 MtrunA17_Chr3g0107011 36.196 163 76 7 19 169 79 225 5.13e-21 89.0
MsaG046067 MtrunA17_Chr1g0166101 34.810 158 77 4 15 160 84 227 8.30e-21 88.2
MsaG046067 MtrunA17_Chr2g0333821 35.758 165 80 5 17 170 77 226 8.48e-21 88.6
MsaG046067 MtrunA17_Chr5g0432471 36.196 163 76 6 19 169 77 223 9.03e-21 88.6
MsaG046067 MtrunA17_Chr2g0284011 36.774 155 72 5 17 160 75 214 1.73e-20 87.4
MsaG046067 MtrunA17_Chr6g0453671 32.317 164 85 3 19 172 84 231 1.84e-20 87.0
MsaG046067 MtrunA17_Chr2g0284031 37.086 151 69 5 19 158 96 231 6.63e-20 86.3
MsaG046067 MtrunA17_Chr8g0379091 35.542 166 77 6 19 171 91 239 2.04e-19 84.7
MsaG046067 MtrunA17_Chr4g0072831 34.694 147 72 4 14 160 49 171 2.61e-19 83.2
MsaG046067 MtrunA17_Chr1g0205421 33.333 165 77 6 19 167 77 224 2.77e-17 78.6
MsaG046067 MtrunA17_Chr4g0059751 36.709 158 71 5 21 169 163 300 4.25e-17 77.8
MsaG046067 MtrunA17_Chr3g0091281 37.748 151 67 5 19 158 77 211 1.12e-16 75.1
MsaG046067 MtrunA17_Chr7g0244561 38.562 153 69 4 19 160 82 220 4.94e-16 74.7
MsaG046067 MtrunA17_Chr3g0091421 34.000 150 74 4 19 158 77 211 1.14e-15 72.4
MsaG046067 MtrunA17_Chr3g0131181 35.065 154 69 5 29 169 105 240 9.77e-15 71.2
MsaG046067 MtrunA17_Chr8g0345801 31.126 151 80 4 19 159 79 215 4.98e-14 68.2
MsaG046067 MtrunA17_Chr1g0203881 34.146 164 77 5 17 167 105 250 6.27e-14 68.9
MsaG046067 MtrunA17_Chr6g0479211 31.126 151 65 5 27 158 129 259 7.68e-14 68.2
MsaG046067 MtrunA17_Chr7g0267771 33.939 165 84 5 17 171 152 301 8.45e-14 68.6
MsaG046067 MtrunA17_Chr2g0286501 28.877 187 88 5 3 158 75 247 9.26e-14 68.6
MsaG046067 MtrunA17_Chr8g0353621 31.818 154 78 5 29 173 85 220 1.19e-13 67.0
MsaG046067 MtrunA17_Chr4g0033371 30.464 151 82 4 17 158 136 272 1.73e-12 64.7
MsaG046067 MtrunA17_Chr1g0200601 32.692 156 74 5 29 171 106 243 1.92e-12 64.7
MsaG046067 MtrunA17_Chr1g0190131 30.968 155 79 5 15 158 69 206 3.29e-12 63.2
MsaG046067 MtrunA17_Chr3g0091291 29.286 140 82 4 7 144 11 135 5.75e-12 61.6
MsaG046067 MtrunA17_Chr4g0045261 29.697 165 92 5 17 171 204 354 8.07e-12 62.8
MsaG046067 MtrunA17_Chr1g0157131 29.801 151 83 4 17 158 138 274 1.16e-11 62.4
MsaG046067 MtrunA17_Chr5g0444171 30.921 152 80 5 17 158 156 292 1.36e-11 62.0
MsaG046067 MtrunA17_Chr8g0374701 29.091 165 93 5 17 171 195 345 1.42e-11 62.0
MsaG046067 MtrunA17_Chr4g0008561 28.667 150 83 4 19 158 83 218 1.54e-11 62.0
MsaG046067 MtrunA17_Chr2g0326531 30.000 140 73 4 29 158 202 326 1.96e-11 61.6
MsaG046067 MtrunA17_Chr5g0402551 28.313 166 93 6 17 171 201 351 2.24e-11 61.6
MsaG046067 MtrunA17_Chr8g0355131 33.113 151 75 5 19 158 113 248 2.26e-11 61.6
MsaG046067 MtrunA17_Chr1g0170551 26.829 164 93 6 6 158 56 203 2.34e-11 61.6
MsaG046067 MtrunA17_Chr1g0176751 33.333 141 67 5 29 158 200 324 2.39e-11 61.6
MsaG046067 MtrunA17_Chr3g0098951 31.126 151 81 4 17 158 148 284 2.62e-11 61.2
MsaG046067 MtrunA17_Chr1g0173541 30.263 152 81 5 17 158 116 252 2.69e-11 61.2
MsaG046067 MtrunA17_Chr5g0448721 35.000 140 66 5 29 158 172 296 3.08e-11 61.2
MsaG046067 MtrunA17_Chr4g0029241 33.654 104 54 3 66 158 225 324 3.70e-11 60.8
MsaG046067 MtrunA17_Chr5g0441691 32.215 149 76 5 20 158 135 268 5.12e-11 60.5
MsaG046067 MtrunA17_Chr1g0176421 31.373 153 80 5 29 171 237 374 5.63e-11 60.5
MsaG046067 MtrunA17_Chr7g0267751 32.895 152 77 5 17 158 199 335 5.89e-11 60.5
MsaG046067 MtrunA17_Chr3g0129721 33.571 140 69 4 29 158 99 224 6.72e-11 59.7
MsaG046067 MtrunA17_Chr7g0256001 28.485 165 94 5 17 171 208 358 7.81e-11 60.1
MsaG046067 MtrunA17_Chr5g0424501 31.250 128 63 4 55 162 272 394 7.89e-11 59.7
MsaG046067 MtrunA17_Chr8g0387671 34.752 141 65 6 29 158 142 266 8.87e-11 59.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG046067 AT1G10940.2 63.218 174 48 3 17 180 63 230 7.00e-69 214
MsaG046067 AT1G10940.1 62.069 174 42 3 17 180 63 222 3.86e-68 212
MsaG046067 AT4G33950.2 62.286 175 38 4 17 177 80 240 2.05e-67 209
MsaG046067 AT4G33950.1 62.286 175 38 4 17 177 80 240 3.24e-67 209
MsaG046067 AT5G66880.1 60.694 173 44 3 17 179 81 239 2.05e-66 207
MsaG046067 AT5G66880.2 60.694 173 44 3 17 179 81 239 2.05e-66 207
MsaG046067 AT1G60940.1 60.920 174 44 3 17 180 63 222 2.19e-66 207
MsaG046067 AT1G60940.2 60.920 174 44 3 17 180 63 222 2.19e-66 207
MsaG046067 AT3G50500.1 63.636 165 36 3 17 171 82 232 2.61e-66 207
MsaG046067 AT5G08590.1 61.494 174 43 3 17 180 63 222 4.41e-66 206
MsaG046067 AT3G50500.2 60.674 178 43 3 17 179 82 247 7.67e-66 206
MsaG046067 AT4G40010.1 61.850 173 42 3 17 179 63 221 1.36e-65 205
MsaG046067 AT2G23030.1 58.621 174 48 3 17 180 63 222 6.35e-65 202
MsaG046067 AT5G63650.1 60.345 174 45 3 17 180 63 222 7.98e-65 203
MsaG046067 AT1G78290.3 61.446 166 40 3 17 172 63 214 7.04e-64 200
MsaG046067 AT1G78290.2 61.446 166 40 3 17 172 63 214 7.04e-64 200
MsaG046067 AT5G08590.2 59.375 160 41 3 31 180 1 146 1.79e-57 182
MsaG046067 AT5G39440.1 38.411 151 68 3 19 160 84 218 7.03e-26 103
MsaG046067 AT3G01090.3 38.323 167 71 4 19 172 84 231 8.85e-26 103
MsaG046067 AT3G01090.1 38.323 167 71 4 19 172 84 231 8.85e-26 103
MsaG046067 AT3G01090.2 38.323 167 71 4 19 172 107 254 9.34e-26 103
MsaG046067 AT1G01140.2 40.260 154 67 4 19 161 84 223 1.49e-25 102
MsaG046067 AT1G01140.1 40.260 154 67 4 19 161 84 223 1.57e-25 102
MsaG046067 AT1G01140.3 40.260 154 67 4 19 161 84 223 1.86e-25 102
MsaG046067 AT3G29160.3 37.725 167 72 4 19 172 85 232 2.58e-25 100
MsaG046067 AT1G30270.2 39.216 153 68 4 19 160 96 234 5.15e-25 100
MsaG046067 AT1G30270.1 39.216 153 68 4 19 160 96 234 5.82e-25 100
MsaG046067 AT4G24400.2 40.789 152 65 4 19 160 74 210 6.52e-25 100
MsaG046067 AT4G24400.1 40.789 152 65 4 19 160 74 210 1.00e-24 99.8
MsaG046067 AT3G29160.1 37.725 167 72 4 19 172 85 232 1.17e-24 100
MsaG046067 AT3G29160.2 37.725 167 72 4 19 172 85 232 1.17e-24 100
MsaG046067 AT2G26980.2 40.000 155 64 5 19 160 79 217 2.66e-24 96.3
MsaG046067 AT5G35410.2 38.012 171 79 5 11 169 66 221 5.78e-24 97.1
MsaG046067 AT1G30270.3 38.926 149 66 4 23 160 3 137 6.58e-24 97.1
MsaG046067 AT5G35410.1 38.012 171 79 5 11 169 66 221 7.00e-24 97.4
MsaG046067 AT2G26980.1 40.000 155 64 5 19 160 79 217 1.04e-23 96.3
MsaG046067 AT2G26980.3 40.000 155 64 5 19 160 79 217 1.15e-23 96.7
MsaG046067 AT2G26980.4 40.000 155 64 5 19 160 89 227 1.26e-23 96.7
MsaG046067 AT2G26980.5 40.000 155 64 5 19 160 79 217 1.61e-23 96.3
MsaG046067 AT2G30360.1 37.427 171 74 7 15 169 81 234 2.62e-23 95.9
MsaG046067 AT1G48260.1 37.179 156 67 5 19 160 76 214 3.47e-23 95.5
MsaG046067 AT5G21326.1 36.364 165 80 4 19 172 78 228 5.18e-23 95.1
MsaG046067 AT5G10930.1 37.805 164 76 5 17 169 76 224 6.04e-23 94.7
MsaG046067 AT3G17510.2 33.939 165 76 5 16 167 2 146 8.07e-23 93.6
MsaG046067 AT3G17510.1 36.250 160 73 5 19 167 85 226 9.48e-23 94.4
MsaG046067 AT5G21222.1 37.255 153 71 4 19 160 78 216 2.23e-22 94.0
MsaG046067 AT5G21222.2 37.255 153 71 4 19 160 78 216 2.23e-22 94.0
MsaG046067 AT5G21222.4 37.255 153 71 4 19 160 78 216 2.23e-22 94.0
MsaG046067 AT5G21222.3 37.255 153 71 4 19 160 78 216 2.23e-22 94.0
MsaG046067 AT2G25090.1 36.875 160 69 4 17 158 79 224 4.82e-22 92.4
MsaG046067 AT1G48260.2 38.356 146 59 5 29 160 1 129 6.16e-22 91.3
MsaG046067 AT1G48260.4 38.356 146 59 5 29 160 1 129 6.16e-22 91.3
MsaG046067 AT1G48260.3 38.356 146 59 5 29 160 1 129 6.16e-22 91.3
MsaG046067 AT1G48260.5 38.356 146 59 5 29 160 1 129 6.16e-22 91.3
MsaG046067 AT5G58380.1 35.185 162 79 6 19 169 77 223 6.20e-22 92.0
MsaG046067 AT5G25110.1 35.366 164 80 5 17 169 106 254 1.13e-21 91.7
MsaG046067 AT5G45820.1 37.423 163 74 6 19 169 77 223 1.34e-21 90.9
MsaG046067 AT2G34180.1 37.267 161 59 7 19 160 122 259 5.95e-21 89.4
MsaG046067 AT5G01810.3 39.103 156 63 7 19 160 77 214 6.43e-21 88.6
MsaG046067 AT2G38490.1 35.542 166 79 5 16 169 90 239 7.75e-21 89.0
MsaG046067 AT3G23000.1 35.503 169 79 5 15 169 85 237 8.47e-21 88.6
MsaG046067 AT4G14580.1 36.310 168 80 5 15 169 81 234 8.69e-21 88.6
MsaG046067 AT5G01810.1 39.103 156 63 7 19 160 77 214 9.35e-21 88.6
MsaG046067 AT5G01810.2 39.103 156 63 7 19 160 77 214 9.35e-21 88.6
MsaG046067 AT5G45810.1 37.908 153 69 5 19 160 93 230 1.70e-20 88.2
MsaG046067 AT4G18700.1 37.086 151 69 5 19 158 91 226 4.09e-20 87.0
MsaG046067 AT1G29230.1 37.580 157 60 6 19 158 139 274 5.04e-20 87.0
MsaG046067 AT5G57630.2 36.184 152 70 4 19 160 77 211 9.93e-20 85.5
MsaG046067 AT5G57630.1 36.184 152 70 4 19 160 77 211 1.02e-19 85.5
MsaG046067 AT4G30960.1 36.585 164 74 6 19 169 89 235 1.13e-19 85.5
MsaG046067 AT5G07070.1 35.185 162 79 6 19 169 77 223 4.36e-17 78.2
MsaG046067 AT5G57630.3 35.714 140 63 4 31 160 1 123 7.80e-17 77.0
MsaG046067 AT5G01820.1 37.179 156 66 7 19 160 87 224 1.08e-16 77.0
MsaG046067 AT3G10540.1 32.370 173 81 6 20 172 111 267 2.05e-16 76.6
MsaG046067 AT5G62310.1 30.526 190 79 5 21 171 821 996 3.39e-14 70.1
MsaG046067 AT5G23580.1 33.540 161 82 5 29 180 98 242 5.01e-14 69.7
MsaG046067 AT1G76040.3 34.211 152 75 5 17 158 176 312 2.13e-13 67.8
MsaG046067 AT5G57565.4 31.852 135 73 4 17 149 22 139 2.35e-13 65.5
MsaG046067 AT1G76040.2 34.211 152 75 5 17 158 176 312 2.94e-13 67.4
MsaG046067 AT5G57565.5 34.426 122 63 3 17 138 22 126 3.62e-13 63.9
MsaG046067 AT5G57565.1 34.426 122 63 3 17 138 22 126 3.62e-13 63.9
MsaG046067 AT2G31500.1 32.450 151 79 4 17 158 130 266 5.53e-13 66.6
MsaG046067 AT2G45490.2 29.221 154 82 4 29 173 97 232 7.85e-13 65.1
MsaG046067 AT2G17290.1 34.437 151 76 4 17 158 149 285 9.38e-13 65.9
MsaG046067 AT2G17290.2 34.437 151 76 4 17 158 149 285 9.38e-13 65.9
MsaG046067 AT1G12680.1 30.216 139 73 3 29 159 176 298 1.23e-12 65.5
MsaG046067 AT2G45490.1 29.221 154 82 4 29 173 97 232 1.32e-12 64.7
MsaG046067 AT3G45240.2 31.429 140 71 4 29 158 191 315 1.36e-12 65.5
MsaG046067 AT3G45240.1 31.429 140 71 4 29 158 191 315 1.36e-12 65.5
MsaG046067 AT4G38230.4 33.113 151 78 4 17 158 88 224 1.75e-12 65.1
MsaG046067 AT4G38230.3 33.113 151 78 4 17 158 88 224 1.75e-12 65.1
MsaG046067 AT4G38230.2 33.113 151 78 4 17 158 118 254 2.27e-12 64.7
MsaG046067 AT3G45240.3 31.429 140 68 4 29 158 191 312 3.37e-12 64.3
MsaG046067 AT1G49180.2 31.690 142 75 3 27 159 79 207 4.84e-12 63.5
MsaG046067 AT1G45160.1 28.324 173 75 5 21 158 737 895 6.17e-12 63.5
MsaG046067 AT1G45160.2 28.324 173 75 5 21 158 737 895 7.07e-12 63.5
MsaG046067 AT1G49180.1 31.690 142 75 3 27 159 79 207 7.56e-12 63.2
MsaG046067 AT1G48490.4 29.480 173 71 6 21 158 896 1052 7.61e-12 63.5
MsaG046067 AT1G48490.3 29.480 173 71 6 21 158 895 1051 7.90e-12 63.5
MsaG046067 AT1G48490.2 29.480 173 71 6 21 158 895 1051 7.90e-12 63.5
MsaG046067 AT1G48490.1 29.480 173 71 6 21 158 895 1051 7.90e-12 63.5
MsaG046067 AT4G23650.1 35.000 140 66 5 29 158 154 278 8.29e-12 63.2
MsaG046067 AT2G38910.1 30.719 153 81 5 29 171 210 347 1.46e-11 62.4
MsaG046067 AT2G41860.2 30.409 171 87 6 17 177 118 266 1.54e-11 62.4
MsaG046067 AT5G12480.1 31.126 151 81 4 17 158 123 259 1.98e-11 62.0
MsaG046067 AT2G41860.1 30.000 170 89 5 17 177 118 266 2.09e-11 62.0
MsaG046067 AT5G18700.1 27.322 183 92 4 3 158 30 198 2.26e-11 62.0
MsaG046067 AT3G04530.1 32.317 164 80 9 15 163 71 218 2.46e-11 61.2
MsaG046067 AT2G41140.1 29.167 168 95 5 17 174 190 343 2.61e-11 61.6
MsaG046067 AT3G49370.1 30.323 155 78 6 17 158 209 346 2.81e-11 61.6
MsaG046067 AT4G35310.2 35.714 140 65 5 29 158 173 297 2.82e-11 61.6
MsaG046067 AT4G35310.1 35.714 140 65 5 29 158 173 297 2.82e-11 61.6
MsaG046067 AT5G57565.2 34.821 112 50 3 17 128 22 110 3.01e-11 58.5
MsaG046067 AT5G57565.6 34.821 112 50 3 17 128 22 110 3.01e-11 58.5
MsaG046067 AT4G38470.3 30.357 168 87 6 24 177 357 508 3.33e-11 61.2
MsaG046067 AT2G37840.1 28.205 156 86 5 15 158 70 211 4.14e-11 61.2
MsaG046067 AT4G38470.2 31.507 146 74 5 24 159 357 486 4.85e-11 60.8
MsaG046067 AT5G19450.2 30.464 151 82 4 17 158 121 257 5.24e-11 60.8
MsaG046067 AT5G19450.1 30.464 151 82 4 17 158 121 257 5.24e-11 60.8
MsaG046067 AT4G38470.1 31.507 146 74 5 24 159 357 486 5.65e-11 60.8
MsaG046067 AT4G04710.2 30.719 153 79 5 29 168 112 250 5.66e-11 60.8
MsaG046067 AT4G04710.3 30.719 153 79 5 29 168 98 236 6.17e-11 60.5
MsaG046067 AT4G04710.1 31.944 144 71 5 29 159 112 241 6.40e-11 60.5
MsaG046067 AT4G04710.4 31.944 144 71 5 29 159 112 241 6.59e-11 60.5
MsaG046067 AT4G26890.1 28.966 145 73 4 29 163 77 201 6.66e-11 60.5
MsaG046067 AT1G54960.1 30.556 144 76 4 27 160 146 275 6.70e-11 60.5
MsaG046067 AT1G54960.2 30.556 144 76 4 27 160 146 275 6.70e-11 60.5
MsaG046067 AT1G50700.2 31.126 151 81 4 17 158 137 273 6.76e-11 60.5
MsaG046067 AT1G09000.2 29.861 144 77 4 27 160 147 276 8.91e-11 60.1
MsaG046067 AT1G50700.1 31.126 151 81 4 17 158 137 273 8.96e-11 60.1
MsaG046067 AT5G57565.7 39.024 82 37 1 17 98 22 90 9.34e-11 57.0
MsaG046067 AT1G50700.3 31.126 151 81 4 17 158 137 273 9.34e-11 60.1
MsaG046067 AT5G24430.1 29.605 152 83 5 17 158 210 347 9.62e-11 60.1

Find 45 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGTGTTTCTGAGACACTTTC+TGG 0.093470 8:-80052824 None:intergenic
CTGAAATTTCTATGATCTTC+TGG 0.176143 8:-80054182 None:intergenic
TCATCATAGAGATTTGAAAT+TGG 0.298226 8:+80053647 MsaT046067.1:CDS
GAAATTTCAGAAAGACTATT+GGG 0.308763 8:+80054195 MsaT046067.1:CDS
AGAAATTTCAGAAAGACTAT+TGG 0.330609 8:+80054194 MsaT046067.1:CDS
TTATTCCAAAAGCTAATATC+TGG 0.351628 8:+80053532 MsaT046067.1:CDS
TAACACCAGATATTAGCTTT+TGG 0.354034 8:-80053537 None:intergenic
GGAGTTCCAACTGTCGCCTT+TGG 0.373657 8:-80053845 None:intergenic
TGATCTTCTGGTTCTTCAAA+TGG 0.389191 8:-80054170 None:intergenic
GAAATTGGAAAACACTCTCT+TGG 0.399280 8:+80053662 MsaT046067.1:CDS
TTCTCATCTAGCCATTGTCT+TGG 0.448653 8:+80053328 MsaT046067.1:CDS
ATCTTGCATGTAGCAAATAT+AGG 0.479710 8:-80053507 None:intergenic
TTGAGCTATAACATGTTGTC+GGG 0.481559 8:-80052848 None:intergenic
TTTGAGCTATAACATGTTGT+CGG 0.492735 8:-80052849 None:intergenic
TTCATGAGGATAGGCACAAC+CGG 0.498161 8:+80053374 MsaT046067.1:CDS
AAGAGATTATTCATAGTGAA+TGG 0.509645 8:-80054250 None:intergenic
TTGGAAAACACTCTCTTGGA+TGG 0.513601 8:+80053666 MsaT046067.1:CDS
CAAGATTTAAGCCGAGGGGA+TGG 0.525817 8:-80053693 None:intergenic
ATGTGAATTACTATTAACCT+TGG 0.541672 8:-80053730 None:intergenic
AAGACAATGGCTAGATGAGA+AGG 0.542672 8:-80053326 None:intergenic
TGTTAGCTACTATCATTCAA+TGG 0.549706 8:+80053555 MsaT046067.1:CDS
TCCTTCATTCAGTGCTCCTG+AGG 0.551255 8:+80053865 MsaT046067.1:CDS
GTCATAAAGTGTCACACCAC+AGG 0.555054 8:-80054129 None:intergenic
ACCTCAGGAGCACTGAATGA+AGG 0.560856 8:-80053866 None:intergenic
CAGTTCTCACTCTGATCCAA+AGG 0.569817 8:+80053829 MsaT046067.1:CDS
ACACTTTATGACATGCTAGT+TGG 0.570446 8:+80054140 MsaT046067.1:CDS
CTCGTCTTCACTAAATCGAC+CGG 0.572882 8:-80053393 None:intergenic
TTGCAACTTCGATTACTCCA+AGG 0.574622 8:+80053713 MsaT046067.1:CDS
TCTGATCCAAAGGCGACAGT+TGG 0.577370 8:+80053839 MsaT046067.1:CDS
AGACAATGGCTAGATGAGAA+GGG 0.591203 8:-80053325 None:intergenic
TAATATTTACAGATTCAAAG+AGG 0.597629 8:+80052932 MsaT046067.1:intron
ATTGCAGATGTGTGGTCCTG+TGG 0.607065 8:+80054113 MsaT046067.1:CDS
AAGTTGCAAGATTTAAGCCG+AGG 0.609007 8:-80053699 None:intergenic
CGGTCGATTTAGTGAAGACG+AGG 0.612886 8:+80053394 MsaT046067.1:CDS
GGTGAACTCTTCATGAGGAT+AGG 0.616301 8:+80053365 MsaT046067.1:CDS
AGTTGCAAGATTTAAGCCGA+GGG 0.618700 8:-80053698 None:intergenic
TTGTATAGATTGCAGATGTG+TGG 0.620311 8:+80054105 MsaT046067.1:intron
TGGATGGAAATCCATCCCCT+CGG 0.620502 8:+80053682 MsaT046067.1:CDS
ATTGTCTTGGAGTATGCTGA+TGG 0.625672 8:+80053341 MsaT046067.1:CDS
GACAATGGCTAGATGAGAAG+GGG 0.626872 8:-80053324 None:intergenic
GTCTTGGAGTATGCTGATGG+TGG 0.656453 8:+80053344 MsaT046067.1:CDS
ATCAGCATACTCCAAGACAA+TGG 0.671309 8:-80053339 None:intergenic
AAATTTCAGAAAGACTATTG+GGG 0.682464 8:+80054196 MsaT046067.1:CDS
ATGGTGGTGAACTCTTCATG+AGG 0.713505 8:+80053360 MsaT046067.1:CDS
GTTGCAAGATTTAAGCCGAG+GGG 0.717502 8:-80053697 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
Chromosome Type Strat End Strand Name
Chr8 gene 80052812 80054266 80052812 ID=MsaG046067
Chr8 mRNA 80052812 80054266 80052812 ID=MsaT046067.1;Parent=MsaG046067
Chr8 exon 80052812 80052858 80052812 ID=MsaT046067.1.exon1;Parent=MsaT046067.1
Chr8 CDS 80052812 80052858 80052812 ID=cds.MsaT046067.1;Parent=MsaT046067.1
Chr8 exon 80052944 80052953 80052944 ID=MsaT046067.1.exon2;Parent=MsaT046067.1
Chr8 CDS 80052944 80052953 80052944 ID=cds.MsaT046067.1;Parent=MsaT046067.1
Chr8 exon 80053314 80053415 80053314 ID=MsaT046067.1.exon3;Parent=MsaT046067.1
Chr8 CDS 80053314 80053415 80053314 ID=cds.MsaT046067.1;Parent=MsaT046067.1
Chr8 exon 80053487 80053576 80053487 ID=MsaT046067.1.exon4;Parent=MsaT046067.1
Chr8 CDS 80053487 80053576 80053487 ID=cds.MsaT046067.1;Parent=MsaT046067.1
Chr8 exon 80053642 80053741 80053642 ID=MsaT046067.1.exon5;Parent=MsaT046067.1
Chr8 CDS 80053642 80053741 80053642 ID=cds.MsaT046067.1;Parent=MsaT046067.1
Chr8 exon 80053825 80053886 80053825 ID=MsaT046067.1.exon6;Parent=MsaT046067.1
Chr8 CDS 80053825 80053886 80053825 ID=cds.MsaT046067.1;Parent=MsaT046067.1
Chr8 exon 80054113 80054217 80054113 ID=MsaT046067.1.exon7;Parent=MsaT046067.1
Chr8 CDS 80054113 80054217 80054113 ID=cds.MsaT046067.1;Parent=MsaT046067.1
Chr8 exon 80054240 80054266 80054240 ID=MsaT046067.1.exon8;Parent=MsaT046067.1
Chr8 CDS 80054240 80054266 80054240 ID=cds.MsaT046067.1;Parent=MsaT046067.1
Gene Sequence

>MsaT046067.1

ATGAGTTTCAAACCAGAAAGTGTCTCAGAAACACGTCCCGACAACATATTCAAAGAGGTCTTTCTTACCCCTTCTCATCTAGCCATTGTCTTGGAGTATGCTGATGGTGGTGAACTCTTCATGAGGATAGGCACAACCGGTCGATTTAGTGAAGACGAGTTATTCACATTGAAAATTTTCCTATATTTGCTACATGCAAGATATTTATTCCAAAAGCTAATATCTGGTGTTAGCTACTATCATTCAATGGAAATTCATCATAGAGATTTGAAATTGGAAAACACTCTCTTGGATGGAAATCCATCCCCTCGGCTTAAATCTTGCAACTTCGATTACTCCAAGGTTAATATCTGCAGTTCTCACTCTGATCCAAAGGCGACAGTTGGAACTCCTTCATTCAGTGCTCCTGAGATTGCAGATGTGTGGTCCTGTGGTGTGACACTTTATGACATGCTAGTTGGTGCATATCCATTTGAAGAACCAGAAGATCATAGAAATTTCAGAAAGACTATTGGGGTTCAAAGTGCCATTCACTATGAATAA
Protein sequence

>MsaT046067.1

MSFKPESVSETRPDNIFKEVFLTPSHLAIVLEYADGGELFMRIGTTGRFSEDELFTLKIFLYLLHARYLFQKLISGVSYYHSMEIHHRDLKLENTLLDGNPSPRLKSCNFDYSKVNICSSHSDPKATVGTPSFSAPEIADVWSCGVTLYDMLVGAYPFEEPEDHRNFRKTIGVQSAIHYE*