Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG046096 | XP_013458498.2 | 91.463 | 328 | 19 | 4 | 1 | 320 | 7 | 333 | 0.0 | 516 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG046096 | sp|Q9SZI6|GAT22_ARATH | 42.105 | 247 | 117 | 6 | 91 | 320 | 115 | 352 | 1.53e-37 | 140 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG046096 | tr|A0A072URU2|A0A072URU2_MEDTR | 91.463 | 328 | 19 | 4 | 1 | 320 | 1 | 327 | 0.0 | 516 |
Gene ID | Type | Classification |
---|---|---|
MsaG046096 | TF | C2C2-GATA |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsaG000640 | MsaG046096 | 0.809892 | 2.582614e-50 | 4.398940e-48 |
MsaG001178 | MsaG046096 | 0.817898 | 4.523468e-52 | 9.416635e-50 |
MsaG001237 | MsaG046096 | 0.809468 | 3.182116e-50 | 5.365008e-48 |
MsaG001531 | MsaG046096 | 0.807866 | 6.974093e-50 | 1.131313e-47 |
MsaG001727 | MsaG046096 | 0.805230 | 2.495176e-49 | 3.803100e-47 |
MsaG001859 | MsaG046096 | 0.800381 | 2.474736e-48 | 3.374955e-46 |
MsaG002177 | MsaG046096 | 0.803733 | 5.101156e-49 | 7.509998e-47 |
MsaG003200 | MsaG046096 | 0.812390 | 7.467289e-51 | 1.352138e-48 |
MsaG003203 | MsaG046096 | 0.804357 | 3.789124e-49 | 5.659621e-47 |
MsaG003239 | MsaG046096 | 0.838885 | 4.058098e-57 | 1.529969e-54 |
MsaG003394 | MsaG046096 | 0.810192 | 2.227555e-50 | 3.821787e-48 |
MsaG003468 | MsaG046096 | 0.816576 | 8.943897e-52 | 1.799573e-49 |
MsaG004108 | MsaG046096 | 0.822662 | 3.704033e-53 | 8.744169e-51 |
MsaG005839 | MsaG046096 | 0.836695 | 1.473045e-56 | 5.191762e-54 |
MsaG007066 | MsaG046096 | 0.807143 | 9.908936e-50 | 1.579820e-47 |
MsaG007192 | MsaG046096 | 0.800518 | 2.321540e-48 | 3.175808e-46 |
MsaG007262 | MsaG046096 | 0.851151 | 2.042270e-60 | 1.151672e-57 |
MsaG007666 | MsaG046096 | 0.802937 | 7.441740e-49 | 1.075592e-46 |
MsaG007880 | MsaG046096 | 0.801446 | 1.503482e-48 | 2.100300e-46 |
MsaG007716 | MsaG046096 | 0.802345 | 9.845075e-49 | 1.403814e-46 |
MsaG008101 | MsaG046096 | 0.816609 | 8.792417e-52 | 1.770563e-49 |
MsaG009409 | MsaG046096 | 0.816192 | 1.089211e-51 | 2.170137e-49 |
MsaG010050 | MsaG046096 | 0.822188 | 4.768268e-53 | 1.111354e-50 |
MsaG010053 | MsaG046096 | 0.807280 | 9.273564e-50 | 1.483300e-47 |
MsaG010095 | MsaG046096 | 0.826030 | 6.032644e-54 | 1.561435e-51 |
MsaG011080 | MsaG046096 | 0.812178 | 8.302135e-51 | 1.495372e-48 |
MsaG011296 | MsaG046096 | 0.807675 | 7.651469e-50 | 1.235490e-47 |
MsaG011646 | MsaG046096 | 0.814664 | 2.373114e-51 | 4.548707e-49 |
MsaG012196 | MsaG046096 | 0.818418 | 3.455294e-52 | 7.290158e-50 |
MsaG012341 | MsaG046096 | 0.818683 | 3.010954e-52 | 6.396491e-50 |
MsaG012422 | MsaG046096 | 0.827663 | 2.467900e-54 | 6.685215e-52 |
MsaG012424 | MsaG046096 | 0.813959 | 3.392179e-51 | 6.388031e-49 |
MsaG043665 | MsaG046096 | 0.815575 | 1.493145e-51 | 2.928643e-49 |
MsaG044284 | MsaG046096 | 0.803566 | 5.521579e-49 | 8.097351e-47 |
MsaG044376 | MsaG046096 | 0.804443 | 3.635919e-49 | 5.441496e-47 |
MsaG044606 | MsaG046096 | 0.834690 | 4.715382e-56 | 1.564965e-53 |
MsaG045021 | MsaG046096 | 0.815991 | 1.207127e-51 | 2.392787e-49 |
MsaG045125 | MsaG046096 | 0.805331 | 2.376649e-49 | 3.630939e-47 |
MsaG045339 | MsaG046096 | 0.803903 | 4.703719e-49 | 6.951950e-47 |
MsaG045446 | MsaG046096 | 0.812956 | 5.622556e-51 | 1.032526e-48 |
MsaG045641 | MsaG046096 | 0.801616 | 1.388132e-48 | 1.946638e-46 |
MsaG046051 | MsaG046096 | 0.800839 | 1.998072e-48 | 2.753144e-46 |
MsaG046096 | MsaG046102 | 0.979389 | 3.647056e-147 | 8.495785e-141 |
MsaG046096 | MsaG046205 | 0.804638 | 3.313374e-49 | 4.981145e-47 |
MsaG046096 | MsaG046619 | 0.807738 | 7.423241e-50 | 1.200437e-47 |
MsaG046096 | MsaG046630 | 0.817896 | 4.529221e-52 | 9.428094e-50 |
MsaG046096 | MsaG046816 | 0.826380 | 4.985841e-54 | 1.303064e-51 |
MsaG046096 | MsaG047054 | 0.822300 | 4.492302e-53 | 1.050224e-50 |
MsaG046096 | MsaG008770 | 0.842953 | 3.516536e-58 | 1.507663e-55 |
MsaG046096 | MsaG014891 | 0.811927 | 9.411440e-51 | 1.684825e-48 |
MsaG046096 | MsaG016847 | 0.823744 | 2.076220e-53 | 5.047310e-51 |
MsaG046096 | MsaG020796 | 0.822684 | 3.661129e-53 | 8.647950e-51 |
MsaG046096 | MsaG018864 | 0.801922 | 1.202003e-48 | 1.697409e-46 |
MsaG046096 | MsaG028073 | 0.834219 | 6.182360e-56 | 2.023009e-53 |
MsaG046096 | MsaG027699 | 0.822595 | 3.838861e-53 | 9.046197e-51 |
MsaG046096 | MsaG027786 | 0.814980 | 2.021574e-51 | 3.905944e-49 |
MsaG046096 | MsaG031221 | 0.851250 | 1.916063e-60 | 1.084194e-57 |
MsaG046096 | MsaG036054 | 0.804932 | 2.877636e-49 | 4.355784e-47 |
MsaG046096 | MsaG039770 | 0.802634 | 8.590013e-49 | 1.232968e-46 |
MsaG046096 | MsaG037687 | 0.901072 | 8.957639e-78 | 4.881894e-74 |
MsaG046096 | MsaG036546 | 0.888219 | 1.563936e-72 | 4.205148e-69 |
MsaG046096 | MsaG036984 | 0.811363 | 1.246486e-50 | 2.200683e-48 |
MsaG046096 | MsaG044075 | 0.810437 | 1.973272e-50 | 3.406037e-48 |
MsaG046096 | MsaG043831 | 0.803303 | 6.257188e-49 | 9.120406e-47 |
MsaG012931 | MsaG046096 | 0.800327 | 2.538111e-48 | 3.457103e-46 |
MsaG012941 | MsaG046096 | 0.806085 | 1.653617e-49 | 2.571359e-47 |
MsaG012942 | MsaG046096 | 0.800629 | 2.204850e-48 | 3.023777e-46 |
MsaG013657 | MsaG046096 | 0.803512 | 5.666189e-49 | 8.299050e-47 |
MsaG013909 | MsaG046096 | 0.814671 | 2.364670e-51 | 4.533291e-49 |
MsaG013993 | MsaG046096 | 0.804124 | 4.233489e-49 | 6.289321e-47 |
MsaG014014 | MsaG046096 | 0.803876 | 4.766427e-49 | 7.040083e-47 |
MsaG014422 | MsaG046096 | 0.809328 | 3.408842e-50 | 5.727412e-48 |
MsaG014733 | MsaG046096 | 0.824073 | 1.740099e-53 | 4.267914e-51 |
MsaG014760 | MsaG046096 | 0.810026 | 2.417658e-50 | 4.131223e-48 |
MsaG014953 | MsaG046096 | 0.809505 | 3.124702e-50 | 5.273015e-48 |
MsaG014920 | MsaG046096 | 0.805596 | 2.092663e-49 | 3.216816e-47 |
MsaG015705 | MsaG046096 | 0.805750 | 1.942936e-49 | 2.997517e-47 |
MsaG016006 | MsaG046096 | 0.806340 | 1.462190e-49 | 2.287529e-47 |
MsaG016724 | MsaG046096 | 0.805429 | 2.267036e-49 | 3.471358e-47 |
MsaG017199 | MsaG046096 | 0.824757 | 1.203215e-53 | 3.006673e-51 |
MsaG017209 | MsaG046096 | 0.812874 | 5.858423e-51 | 1.073656e-48 |
MsaG017861 | MsaG046096 | 0.810684 | 1.746246e-50 | 3.032157e-48 |
MsaG017947 | MsaG046096 | 0.804286 | 3.919530e-49 | 5.844864e-47 |
MsaG018170 | MsaG046096 | 0.819326 | 2.153763e-52 | 4.653605e-50 |
MsaG018553 | MsaG046096 | 0.812449 | 7.248710e-51 | 1.314488e-48 |
MsaG020540 | MsaG046096 | 0.806399 | 1.421058e-49 | 2.226253e-47 |
MsaG021088 | MsaG046096 | 0.801329 | 1.588296e-48 | 2.212920e-46 |
MsaG021575 | MsaG046096 | 0.803721 | 5.131360e-49 | 7.552184e-47 |
MsaG021896 | MsaG046096 | 0.808863 | 4.283631e-50 | 7.117463e-48 |
MsaG022465 | MsaG046096 | 0.809725 | 2.804944e-50 | 4.758263e-48 |
MsaG024240 | MsaG046096 | 0.803215 | 6.525247e-49 | 9.491832e-47 |
MsaG026985 | MsaG046096 | 0.800057 | 2.878709e-48 | 3.897260e-46 |
MsaG028163 | MsaG046096 | 0.827013 | 3.526710e-54 | 9.380713e-52 |
MsaG028375 | MsaG046096 | 0.813304 | 4.717921e-51 | 8.739567e-49 |
MsaG029899 | MsaG046096 | 0.810515 | 1.898084e-50 | 3.282398e-48 |
MsaG029888 | MsaG046096 | 0.814165 | 3.055863e-51 | 5.784445e-49 |
MsaG030010 | MsaG046096 | 0.813321 | 4.677587e-51 | 8.668778e-49 |
MsaG030016 | MsaG046096 | 0.810358 | 2.051711e-50 | 3.534577e-48 |
MsaG033766 | MsaG046096 | 0.810594 | 1.825493e-50 | 3.162907e-48 |
MsaG034287 | MsaG046096 | 0.800858 | 1.980716e-48 | 2.730410e-46 |
MsaG035270 | MsaG046096 | 0.816613 | 8.775400e-52 | 1.767300e-49 |
MsaG035511 | MsaG046096 | 0.810869 | 1.593432e-50 | 2.779317e-48 |
MsaG035669 | MsaG046096 | 0.804984 | 2.806554e-49 | 4.253350e-47 |
MsaG035686 | MsaG046096 | 0.802583 | 8.798017e-49 | 1.261368e-46 |
MsaG039739 | MsaG046096 | 0.808059 | 6.346676e-50 | 1.034305e-47 |
MsaG040077 | MsaG046096 | 0.809394 | 3.301355e-50 | 5.555779e-48 |
MsaG040384 | MsaG046096 | 0.803865 | 4.791507e-49 | 7.075445e-47 |
MsaG040985 | MsaG046096 | 0.804814 | 3.044963e-49 | 4.596543e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG046096 | MtrunA17_Chr4g0071301 | 91.463 | 328 | 19 | 4 | 1 | 320 | 7 | 333 | 0.0 | 516 |
MsaG046096 | MtrunA17_Chr2g0299081 | 46.201 | 329 | 130 | 14 | 1 | 320 | 6 | 296 | 5.64e-48 | 163 |
MsaG046096 | MtrunA17_Chr1g0151461 | 44.667 | 150 | 58 | 6 | 122 | 249 | 108 | 254 | 7.21e-26 | 104 |
MsaG046096 | MtrunA17_Chr4g0068031 | 33.784 | 148 | 72 | 4 | 172 | 319 | 22 | 143 | 2.99e-17 | 77.4 |
MsaG046096 | MtrunA17_Chr7g0271861 | 75.000 | 36 | 9 | 0 | 180 | 215 | 22 | 57 | 1.80e-14 | 69.3 |
MsaG046096 | MtrunA17_Chr5g0404131 | 53.448 | 58 | 27 | 0 | 159 | 216 | 171 | 228 | 3.27e-14 | 72.0 |
MsaG046096 | MtrunA17_Chr8g0373231 | 70.270 | 37 | 11 | 0 | 180 | 216 | 125 | 161 | 1.46e-12 | 66.2 |
MsaG046096 | MtrunA17_Chr1g0213161 | 39.506 | 81 | 42 | 2 | 174 | 249 | 146 | 224 | 8.44e-12 | 63.9 |
MsaG046096 | MtrunA17_Chr2g0326771 | 46.377 | 69 | 36 | 1 | 148 | 215 | 183 | 251 | 3.27e-11 | 63.2 |
MsaG046096 | MtrunA17_Chr5g0404981 | 40.244 | 82 | 44 | 2 | 180 | 258 | 300 | 379 | 4.13e-11 | 63.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG046096 | AT4G26150.1 | 42.105 | 247 | 117 | 6 | 91 | 320 | 115 | 352 | 1.56e-38 | 140 |
MsaG046096 | AT5G56860.1 | 44.444 | 153 | 54 | 5 | 91 | 213 | 112 | 263 | 4.63e-24 | 101 |
MsaG046096 | AT5G49300.1 | 36.424 | 151 | 57 | 4 | 169 | 319 | 27 | 138 | 7.33e-18 | 79.3 |
MsaG046096 | AT5G26930.1 | 75.610 | 41 | 10 | 0 | 177 | 217 | 23 | 63 | 4.04e-17 | 76.6 |
MsaG046096 | AT3G06740.1 | 37.778 | 135 | 51 | 5 | 182 | 316 | 43 | 144 | 1.77e-15 | 72.8 |
MsaG046096 | AT4G36620.1 | 50.769 | 65 | 25 | 1 | 180 | 237 | 75 | 139 | 8.06e-15 | 72.8 |
MsaG046096 | AT3G50870.1 | 63.265 | 49 | 17 | 1 | 180 | 227 | 152 | 200 | 3.71e-14 | 72.0 |
MsaG046096 | AT3G16870.1 | 70.000 | 40 | 12 | 0 | 178 | 217 | 40 | 79 | 9.66e-14 | 69.3 |
MsaG046096 | AT4G16141.1 | 67.500 | 40 | 13 | 0 | 178 | 217 | 35 | 74 | 1.84e-13 | 68.6 |
MsaG046096 | AT2G18380.1 | 66.667 | 45 | 14 | 1 | 176 | 219 | 88 | 132 | 2.58e-13 | 68.2 |
MsaG046096 | AT1G08010.2 | 39.773 | 88 | 50 | 2 | 172 | 259 | 212 | 296 | 5.64e-13 | 68.9 |
MsaG046096 | AT1G08010.1 | 39.773 | 88 | 50 | 2 | 172 | 259 | 212 | 296 | 5.64e-13 | 68.9 |
MsaG046096 | AT1G08010.3 | 39.773 | 88 | 50 | 2 | 172 | 259 | 212 | 296 | 5.64e-13 | 68.9 |
MsaG046096 | AT1G08000.2 | 38.636 | 88 | 50 | 2 | 172 | 259 | 210 | 293 | 3.05e-12 | 66.6 |
MsaG046096 | AT1G08000.1 | 38.636 | 88 | 50 | 2 | 172 | 259 | 210 | 293 | 3.05e-12 | 66.6 |
Find 60 sgRNAs with CRISPR-Local
Find sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GCAATAATTATTCAACTATT+AGG | 0.137638 | 8:+80447433 | MsaT046096.1:CDS |
TGAACAATCAAACTCAATTT+TGG | 0.139942 | 8:-80447974 | None:intergenic |
ATTAAGCTTGAGTGAGAATT+TGG | 0.175716 | 8:+80448083 | MsaT046096.1:CDS |
CTTCTCATGGCGTTATCTTA+TGG | 0.189112 | 8:+80448150 | MsaT046096.1:CDS |
GAAAATGAAGAAGAAGAATT+TGG | 0.264622 | 8:-80446868 | None:intergenic |
GCTGCTGCAGCATCGGCAAT+TGG | 0.307111 | 8:+80447883 | MsaT046096.1:CDS |
CAATAATTATTCAACTATTA+GGG | 0.315780 | 8:+80447434 | MsaT046096.1:CDS |
TTGCAGCCTCTCTCTCATCC+TGG | 0.357986 | 8:-80448125 | None:intergenic |
TGCAGCCTCTCTCTCATCCT+GGG | 0.415909 | 8:-80448124 | None:intergenic |
ATGTATACCTTTGGGCCTCT+TGG | 0.416802 | 8:-80447504 | None:intergenic |
CATGTGGTAAGTTGTTTGTT+TGG | 0.417311 | 8:-80446960 | None:intergenic |
TTAAGCTTGAGTGAGAATTT+GGG | 0.418107 | 8:+80448084 | MsaT046096.1:CDS |
AAGGAAGGCAAGACGTGCTT+TGG | 0.419438 | 8:+80447858 | MsaT046096.1:CDS |
ACACCACTAAGACCCCTCTA+TGG | 0.423028 | 8:+80447472 | MsaT046096.1:CDS |
CTTGATCTTGTGAGTCTAAG+AGG | 0.434136 | 8:-80446915 | None:intergenic |
CCTCCATAGAGGGGTCTTAG+TGG | 0.441426 | 8:-80447475 | None:intergenic |
GATGATGGTTTCTGATCAAA+CGG | 0.456924 | 8:+80447320 | MsaT046096.1:CDS |
TTGGTCCACTCCTCCATAGA+GGG | 0.468086 | 8:-80447485 | None:intergenic |
TTTGTTTGGCAGTAATAAGA+TGG | 0.481929 | 8:-80446946 | None:intergenic |
TGATCTTGATTAAGATCAAA+GGG | 0.497131 | 8:-80446826 | None:intergenic |
AAGAAGAATTTGGACTAGAA+AGG | 0.497380 | 8:-80446858 | None:intergenic |
ATTAAGATCAAAGGGCTTGA+CGG | 0.498526 | 8:-80446818 | None:intergenic |
TTATCTTATGGATTAGTCCA+TGG | 0.502722 | 8:+80448162 | MsaT046096.1:CDS |
ATATTCACTCAAGTGGATCA+TGG | 0.512325 | 8:+80447130 | MsaT046096.1:CDS |
GAGAATAATGAAGAAGATGA+TGG | 0.517661 | 8:+80447305 | MsaT046096.1:CDS |
TTTGGCTGCTGCTGCAGCAT+CGG | 0.517772 | 8:+80447876 | MsaT046096.1:CDS |
CTTGGTCCACTCCTCCATAG+AGG | 0.517925 | 8:-80447486 | None:intergenic |
TTGATCTTGATTAAGATCAA+AGG | 0.518492 | 8:-80446827 | None:intergenic |
TGATCTTAATTAGGTTGAGA+AGG | 0.524769 | 8:+80447104 | MsaT046096.1:intron |
TACTTTACCTCTTGATCATG+TGG | 0.541831 | 8:-80446976 | None:intergenic |
AACACAAGCTGACAATTCGT+TGG | 0.542076 | 8:+80447193 | MsaT046096.1:CDS |
AAGGTTAATATTCACTCAAG+TGG | 0.542101 | 8:+80447123 | MsaT046096.1:CDS |
CAGTCACTTTGCAACGCATG+TGG | 0.556816 | 8:+80447826 | MsaT046096.1:intron |
AATTTGGACTAGAAAGGTCA+TGG | 0.556899 | 8:-80446852 | None:intergenic |
CAACTTACCACATGATCAAG+AGG | 0.559110 | 8:+80446969 | MsaT046096.1:CDS |
GCAGCCTCTCTCTCATCCTG+GGG | 0.567150 | 8:-80448123 | None:intergenic |
AGAGGCTGCAATCCTTCTCA+TGG | 0.574547 | 8:+80448137 | MsaT046096.1:CDS |
ATGATGGTTTCTGATCAAAC+GGG | 0.587005 | 8:+80447321 | MsaT046096.1:CDS |
ATGTGGGATTAGACAAAGGA+AGG | 0.591436 | 8:+80447843 | MsaT046096.1:CDS |
CTGCTATTATCTGTTCCTTG+TGG | 0.602551 | 8:-80447408 | None:intergenic |
TGATCATGAGGATGGTACTT+CGG | 0.612710 | 8:+80447260 | MsaT046096.1:CDS |
CAAGAAGCTGATCATGAGGA+TGG | 0.614482 | 8:+80447252 | MsaT046096.1:CDS |
AGGATGGTACTTCGGTGAAG+TGG | 0.614786 | 8:+80447268 | MsaT046096.1:CDS |
TTGATCTTGTGAGTCTAAGA+GGG | 0.615407 | 8:-80446914 | None:intergenic |
CATAAGATAACGCCATGAGA+AGG | 0.615895 | 8:-80448149 | None:intergenic |
TAATCAAGAAGCTGATCATG+AGG | 0.617008 | 8:+80447248 | MsaT046096.1:CDS |
GAGTGGACCAAGAGGCCCAA+AGG | 0.618470 | 8:+80447497 | MsaT046096.1:CDS |
CAATGAACTAAGCTCAACCA+TGG | 0.619076 | 8:-80448179 | None:intergenic |
TCTGTTCCTTGTGGTGACAG+TGG | 0.621928 | 8:-80447399 | None:intergenic |
TTGACGGACGAAGATAGATA+AGG | 0.632473 | 8:-80446802 | None:intergenic |
TGGTCCACTCCTCCATAGAG+GGG | 0.635988 | 8:-80447484 | None:intergenic |
AAGACCCCTCTATGGAGGAG+TGG | 0.638844 | 8:+80447480 | MsaT046096.1:CDS |
GACGAAGATAGATAAGGTGG+TGG | 0.639273 | 8:-80446796 | None:intergenic |
CCACTAAGACCCCTCTATGG+AGG | 0.641407 | 8:+80447475 | MsaT046096.1:CDS |
AGTCACTTTGCAACGCATGT+GGG | 0.651862 | 8:+80447827 | MsaT046096.1:intron |
AAGCAACCACTGTCACCACA+AGG | 0.654177 | 8:+80447393 | MsaT046096.1:CDS |
ACGGACGAAGATAGATAAGG+TGG | 0.673417 | 8:-80446799 | None:intergenic |
ACGCATGTGGGATTAGACAA+AGG | 0.678808 | 8:+80447839 | MsaT046096.1:CDS |
CAGCCTCTCTCTCATCCTGG+GGG | 0.685188 | 8:-80448122 | None:intergenic |
CTATGGAGGAGTGGACCAAG+AGG | 0.688009 | 8:+80447489 | MsaT046096.1:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr8 | gene | 80446790 | 80448188 | 80446790 | ID=MsaG046096 |
Chr8 | mRNA | 80446790 | 80448188 | 80446790 | ID=MsaT046096.1;Parent=MsaG046096 |
Chr8 | exon | 80446790 | 80446990 | 80446790 | ID=MsaT046096.1.exon1;Parent=MsaT046096.1 |
Chr8 | CDS | 80446790 | 80446990 | 80446790 | ID=cds.MsaT046096.1;Parent=MsaT046096.1 |
Chr8 | exon | 80447117 | 80447518 | 80447117 | ID=MsaT046096.1.exon2;Parent=MsaT046096.1 |
Chr8 | CDS | 80447117 | 80447518 | 80447117 | ID=cds.MsaT046096.1;Parent=MsaT046096.1 |
Chr8 | exon | 80447829 | 80448188 | 80447829 | ID=MsaT046096.1.exon3;Parent=MsaT046096.1 |
Chr8 | CDS | 80447829 | 80448188 | 80447829 | ID=cds.MsaT046096.1;Parent=MsaT046096.1 |
Gene Sequence |
Protein sequence |