AlfalfaGEDB | MsaG046115

M. sativa ssp. caerulea / MsaG046115

KEGG: -
GO: -
PFAM: PF10533.12

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG046115	XP_003610020.1	94.688	320	9	4	1	315	1	317	0.0	600

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG046115	sp\|Q9SV15\|WRK11_ARATH	54.518	332	100	11	1	305	1	308	1.64e-106	316

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG046115	tr\|B3U396\|B3U396_MEDTR	94.688	320	9	4	1	315	1	317	0.0	600

TFs/TRs:

Gene ID	Type	Classification
MsaG046115	TF	WRKY

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsaG000309	MsaG046115	0.829872	7.251404e-55	2.091019e-52
MsaG001013	MsaG046115	0.816733	8.249820e-52	1.666620e-49
MsaG001366	MsaG046115	0.815080	1.920801e-51	3.720520e-49
MsaG001653	MsaG046115	0.868793	1.014798e-65	1.118310e-62
MsaG005217	MsaG046115	0.801667	1.354815e-48	1.902151e-46
MsaG005913	MsaG046115	0.810149	2.275278e-50	3.899590e-48
MsaG006235	MsaG046115	0.877509	1.240447e-68	1.996336e-65
MsaG006237	MsaG046115	0.815873	1.281890e-51	2.533412e-49
MsaG006304	MsaG046115	0.803739	5.087611e-49	7.490970e-47
MsaG006884	MsaG046115	0.824706	1.237382e-53	3.087639e-51
MsaG007070	MsaG046115	0.800122	2.792506e-48	3.785977e-46
MsaG007798	MsaG046115	0.834896	4.186051e-56	1.397843e-53
MsaG008035	MsaG046115	0.812214	8.154853e-51	1.470125e-48
MsaG008326	MsaG046115	0.804196	4.090508e-49	6.087007e-47
MsaG008881	MsaG046115	0.800457	2.389088e-48	3.263726e-46
MsaG009050	MsaG046115	0.813674	3.916243e-51	7.322315e-49
MsaG009701	MsaG046115	0.800990	1.861990e-48	2.574370e-46
MsaG010571	MsaG046115	0.825444	8.296894e-54	2.112722e-51
MsaG011772	MsaG046115	0.803989	4.514957e-49	6.686376e-47
MsaG012138	MsaG046115	0.805070	2.693738e-49	4.090512e-47
MsaG012226	MsaG046115	0.831480	2.940462e-55	8.879966e-53
MsaG042122	MsaG046115	0.806508	1.347696e-49	2.116838e-47
MsaG042546	MsaG046115	0.832191	1.967560e-55	6.066278e-53
MsaG043414	MsaG046115	0.803609	5.409681e-49	7.941067e-47
MsaG043976	MsaG046115	0.836873	1.327166e-56	4.702825e-54
MsaG044389	MsaG046115	0.800966	1.883232e-48	2.602288e-46
MsaG044390	MsaG046115	0.850710	2.716104e-60	1.508528e-57
MsaG045536	MsaG046115	0.817237	6.365966e-52	1.302905e-49
MsaG045873	MsaG046115	0.812577	6.799831e-51	1.237012e-48
MsaG046115	MsaG002460	0.805203	2.527050e-49	3.849322e-47
MsaG046115	MsaG000837	0.812715	6.345352e-51	1.158275e-48
MsaG046115	MsaG007338	0.802824	7.853047e-49	1.132043e-46
MsaG046115	MsaG011182	0.813453	4.377292e-51	8.139290e-49
MsaG046115	MsaG009207	0.828561	1.502781e-54	4.174834e-52
MsaG046115	MsaG013115	0.819134	2.380286e-52	5.117203e-50
MsaG046115	MsaG016881	0.826954	3.641899e-54	9.671680e-52
MsaG046115	MsaG011633	0.808073	6.304472e-50	1.027767e-47
MsaG046115	MsaG013857	0.832349	1.799022e-55	5.572087e-53
MsaG046115	MsaG013372	0.805820	1.878580e-49	2.902982e-47
MsaG046115	MsaG023315	0.820705	1.045090e-52	2.341651e-50
MsaG046115	MsaG032342	0.814742	2.281303e-51	4.381278e-49
MsaG046115	MsaG031107	0.811620	1.096924e-50	1.948863e-48
MsaG046115	MsaG033182	0.820849	9.685068e-53	2.178394e-50
MsaG046115	MsaG038622	0.809707	2.829900e-50	4.798564e-48
MsaG046115	MsaG037254	0.823378	2.526424e-53	6.081059e-51
MsaG013336	MsaG046115	0.811058	1.450439e-50	2.541759e-48
MsaG015020	MsaG046115	0.806627	1.272727e-49	2.004686e-47
MsaG016352	MsaG046115	0.815720	1.386579e-51	2.729667e-49
MsaG016544	MsaG046115	0.828605	1.466739e-54	4.079815e-52
MsaG017259	MsaG046115	0.800715	2.117990e-48	2.910310e-46
MsaG017614	MsaG046115	0.804055	4.375653e-49	6.490286e-47
MsaG017672	MsaG046115	0.801283	1.622761e-48	2.258543e-46
MsaG018322	MsaG046115	0.806798	1.171410e-49	1.852493e-47
MsaG018519	MsaG046115	0.832851	1.352032e-55	4.249256e-53
MsaG018808	MsaG046115	0.820832	9.774349e-53	2.197463e-50
MsaG019542	MsaG046115	0.833219	1.096095e-55	3.482692e-53
MsaG020525	MsaG046115	0.803071	6.984450e-49	1.012629e-46
MsaG021311	MsaG046115	0.824008	1.801692e-53	4.411338e-51
MsaG022595	MsaG046115	0.834509	5.231808e-56	1.726981e-53
MsaG022597	MsaG046115	0.842310	5.200621e-58	2.184202e-55
MsaG022714	MsaG046115	0.802768	8.061775e-49	1.160660e-46
MsaG022970	MsaG046115	0.814850	2.159384e-51	4.158520e-49
MsaG023205	MsaG046115	0.861283	2.257117e-63	1.842731e-60
MsaG023530	MsaG046115	0.830292	5.733696e-55	1.673279e-52
MsaG027692	MsaG046115	0.829781	7.631563e-55	2.194799e-52
MsaG027897	MsaG046115	0.810082	2.352074e-50	4.024634e-48
MsaG028091	MsaG046115	0.841434	8.837068e-58	3.609297e-55
MsaG030334	MsaG046115	0.821578	6.589044e-53	1.510959e-50
MsaG031058	MsaG046115	0.811090	1.427774e-50	2.503954e-48
MsaG033568	MsaG046115	0.805642	2.046826e-49	3.149841e-47
MsaG034605	MsaG046115	0.830001	6.747070e-55	1.952748e-52
MsaG034633	MsaG046115	0.845552	7.100145e-59	3.313153e-56
MsaG035439	MsaG046115	0.801613	1.389749e-48	1.948795e-46
MsaG035935	MsaG046115	0.809595	2.989623e-50	5.055838e-48
MsaG037009	MsaG046115	0.830045	6.582839e-55	1.907590e-52
MsaG038015	MsaG046115	0.805705	1.985511e-49	3.059969e-47
MsaG038117	MsaG046115	0.802125	1.092429e-48	1.549780e-46
MsaG041738	MsaG046115	0.857623	2.804085e-62	1.993653e-59
MsaG041741	MsaG046115	0.824341	1.505915e-53	3.720820e-51
MsaG041743	MsaG046115	0.865811	9.025473e-65	8.807848e-62

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG046115	MtrunA17_Chr4g0071521	94.688	320	9	4	1	315	1	317	0.0	600
MsaG046115	MtrunA17_Chr1g0147881	50.286	350	93	11	1	300	1	319	4.17e-95	285
MsaG046115	MtrunA17_Chr4g0053281	43.072	332	137	11	15	311	20	334	5.14e-70	221
MsaG046115	MtrunA17_Chr5g0401821	44.850	301	110	7	15	311	19	267	5.87e-68	213
MsaG046115	MtrunA17_Chr3g0139021	61.842	152	47	5	161	302	223	373	1.15e-56	188
MsaG046115	MtrunA17_Chr3g0139021	30.734	218	90	6	1	194	1	181	1.20e-16	80.1
MsaG046115	MtrunA17_Chr1g0184691	53.086	162	65	4	150	303	195	353	1.99e-45	157
MsaG046115	MtrunA17_Chr7g0228941	67.089	79	26	0	222	300	31	109	3.65e-36	126
MsaG046115	MtrunA17_Chr2g0293481	59.770	87	30	1	219	300	238	324	1.00e-29	117
MsaG046115	MtrunA17_Chr8g0379461	52.688	93	37	1	219	304	45	137	1.95e-28	110
MsaG046115	MtrunA17_Chr7g0248691	61.446	83	27	1	218	300	134	211	6.81e-28	110
MsaG046115	MtrunA17_Chr2g0284321	56.471	85	36	1	218	301	9	93	1.35e-27	107
MsaG046115	MtrunA17_Chr2g0319961	54.255	94	27	2	219	301	50	138	5.02e-27	106
MsaG046115	MtrunA17_Chr8g0348311	61.446	83	27	1	218	300	135	212	7.02e-27	107
MsaG046115	MtrunA17_Chr7g0270051	55.172	87	35	2	218	300	24	110	4.29e-26	104
MsaG046115	MtrunA17_Chr2g0289181	60.317	63	25	0	240	302	11	73	6.13e-24	97.8
MsaG046115	MtrunA17_Chr1g0202461	51.163	86	41	1	218	302	235	320	3.35e-23	98.6
MsaG046115	MtrunA17_Chr8g0387501	64.407	59	21	0	244	302	130	188	1.99e-21	91.7
MsaG046115	MtrunA17_Chr5g0418191	47.368	95	37	3	218	300	283	376	8.57e-21	92.0
MsaG046115	MtrunA17_Chr5g0418191	47.761	67	32	3	235	300	142	206	2.45e-12	67.0
MsaG046115	MtrunA17_Chr4g0042831	47.312	93	37	3	219	300	243	334	2.37e-20	90.5
MsaG046115	MtrunA17_Chr3g0106491	47.872	94	43	3	227	315	346	438	3.95e-20	90.5
MsaG046115	MtrunA17_Chr3g0106491	46.032	63	32	2	244	306	199	259	1.08e-11	65.5
MsaG046115	MtrunA17_Chr3g0101131	49.451	91	37	3	218	300	382	471	4.17e-20	90.9
MsaG046115	MtrunA17_Chr5g0445311	50.633	79	35	2	225	300	343	420	9.16e-20	89.7
MsaG046115	MtrunA17_Chr7g0263531	57.576	66	27	1	235	300	353	417	1.51e-19	88.6
MsaG046115	MtrunA17_Chr7g0263531	50.725	69	31	3	235	302	180	246	5.81e-15	75.1
MsaG046115	MtrunA17_Chr5g0432161	48.276	87	44	1	223	309	401	486	3.93e-19	87.8
MsaG046115	MtrunA17_Chr3g0079691	43.519	108	50	3	203	300	445	551	6.29e-19	87.4
MsaG046115	MtrunA17_Chr3g0079691	44.928	69	35	3	233	300	269	335	2.81e-12	67.4
MsaG046115	MtrunA17_Chr7g0270191	40.449	89	52	1	218	306	120	207	6.34e-19	85.1
MsaG046115	MtrunA17_Chr4g0001361	45.556	90	45	2	217	302	132	221	9.50e-19	85.1
MsaG046115	MtrunA17_Chr7g0218081	59.016	61	24	1	240	300	407	466	1.19e-18	86.3
MsaG046115	MtrunA17_Chr7g0218081	50.746	67	30	3	235	300	219	283	1.24e-13	71.2
MsaG046115	MtrunA17_Chr3g0136961	56.897	58	25	0	244	301	139	196	1.51e-18	84.3
MsaG046115	MtrunA17_Chr3g0099641	47.500	80	41	1	222	301	231	309	1.68e-18	85.9
MsaG046115	MtrunA17_Chr7g0243891	42.857	105	54	3	207	310	342	441	3.01e-18	85.1
MsaG046115	MtrunA17_Chr4g0004911	49.351	77	35	2	227	300	317	392	3.10e-18	85.1
MsaG046115	MtrunA17_Chr4g0004911	41.333	75	39	2	244	314	185	258	1.73e-11	64.7
MsaG046115	MtrunA17_Chr2g0288871	50.000	74	37	0	227	300	289	362	5.58e-18	84.3
MsaG046115	MtrunA17_Chr2g0322391	48.000	75	39	0	227	301	333	407	5.91e-18	84.3
MsaG046115	MtrunA17_Chr7g0249301	48.718	78	36	2	226	300	272	348	7.36e-18	83.2
MsaG046115	MtrunA17_Chr7g0249301	52.542	59	26	2	244	302	63	119	6.64e-13	68.6
MsaG046115	MtrunA17_Chr5g0418781	39.583	96	57	1	218	313	99	193	9.54e-18	81.6
MsaG046115	MtrunA17_Chr7g0238921	37.190	121	64	4	182	300	70	180	1.90e-17	81.3
MsaG046115	MtrunA17_Chr7g0249311	45.745	94	39	3	218	300	356	448	2.23e-17	82.8
MsaG046115	MtrunA17_Chr7g0249311	49.153	59	28	2	244	302	180	236	6.09e-12	66.2
MsaG046115	MtrunA17_Chr1g0194481	37.624	101	58	2	218	314	133	232	2.63e-17	81.3
MsaG046115	MtrunA17_Chr4g0075201	47.297	74	39	0	227	300	251	324	2.92e-17	82.0
MsaG046115	MtrunA17_Chr7g0270831	53.226	62	29	0	239	300	212	273	4.67e-17	81.3
MsaG046115	MtrunA17_Chr4g0074001	53.125	64	29	1	241	304	357	419	7.25e-17	80.9
MsaG046115	MtrunA17_Chr1g0150801	46.479	71	37	1	230	300	89	158	8.30e-17	76.6
MsaG046115	MtrunA17_Chr4g0051881	46.479	71	37	1	230	300	165	234	9.46e-17	79.7
MsaG046115	MtrunA17_Chr4g0051181	39.806	103	53	2	198	300	207	300	1.03e-16	80.5
MsaG046115	MtrunA17_Chr1g0150281	50.000	58	29	0	244	301	141	198	1.10e-16	79.0
MsaG046115	MtrunA17_Chr7g0216891	43.678	87	41	2	224	308	204	284	1.51e-16	80.1
MsaG046115	MtrunA17_Chr5g0443131	47.887	71	36	1	230	300	144	213	1.68e-16	78.6
MsaG046115	MtrunA17_Chr2g0333851	45.570	79	42	1	222	300	149	226	2.81e-16	78.2
MsaG046115	MtrunA17_Chr2g0294231	39.560	91	52	2	226	314	186	275	3.01e-16	78.6
MsaG046115	MtrunA17_Chr5g0447701	45.122	82	42	2	230	311	239	317	6.24e-16	77.8
MsaG046115	MtrunA17_Chr8g0335811	39.080	87	49	2	218	301	126	211	6.32e-16	75.5
MsaG046115	MtrunA17_Chr8g0383351	46.032	63	33	1	239	301	156	217	9.25e-16	75.5
MsaG046115	MtrunA17_Chr8g0347251	41.935	93	51	2	214	303	106	198	1.19e-15	76.6
MsaG046115	MtrunA17_Chr1g0188941	44.578	83	42	2	218	300	29	107	2.08e-15	71.2
MsaG046115	MtrunA17_Chr4g0068541	39.560	91	51	2	227	314	192	281	2.19e-15	76.3
MsaG046115	MtrunA17_Chr7g0275531	33.884	121	74	3	184	298	55	175	2.28e-15	75.5
MsaG046115	MtrunA17_Chr4g0025061	51.724	58	28	0	243	300	360	417	2.57e-15	76.6
MsaG046115	MtrunA17_Chr3g0129361	42.105	76	40	2	229	301	127	201	2.82e-15	73.6
MsaG046115	MtrunA17_Chr4g0060271	44.304	79	37	2	230	301	235	313	2.85e-15	76.3
MsaG046115	MtrunA17_Chr2g0302391	52.632	57	27	0	244	300	212	268	6.45e-15	75.1
MsaG046115	MtrunA17_Chr8g0383251	50.820	61	29	1	240	300	105	164	8.22e-15	71.6
MsaG046115	MtrunA17_Chr7g0248721	43.373	83	42	3	221	300	116	196	8.98e-15	72.4
MsaG046115	MtrunA17_Chr7g0224801	46.774	62	32	1	239	300	89	149	1.49e-14	70.5
MsaG046115	MtrunA17_Chr3g0126391	35.652	115	66	3	187	298	81	190	1.94e-14	72.8
MsaG046115	MtrunA17_Chr3g0129321	29.744	195	101	8	121	300	1	174	2.35e-14	70.9
MsaG046115	MtrunA17_Chr6g0485431	47.059	68	34	2	240	306	151	217	3.53e-14	72.4
MsaG046115	MtrunA17_Chr4g0025051	44.304	79	38	2	222	300	320	392	5.01e-14	72.4
MsaG046115	MtrunA17_Chr1g0150271	47.541	61	32	0	241	301	99	159	5.17e-14	70.9
MsaG046115	MtrunA17_Chr1g0189391	51.515	66	30	2	240	304	94	158	7.26e-14	71.2
MsaG046115	MtrunA17_Chr8g0386241	44.262	61	33	1	240	300	100	159	2.00e-13	67.8
MsaG046115	MtrunA17_Chr5g0428351	42.857	84	39	2	217	298	164	240	9.10e-13	67.8
MsaG046115	MtrunA17_Chr8g0387981	40.449	89	48	3	218	302	106	193	3.02e-12	66.6
MsaG046115	MtrunA17_Chr5g0402931	50.877	57	25	2	244	300	124	177	4.34e-12	63.9
MsaG046115	MtrunA17_Chr3g0128671	40.000	90	44	2	219	306	111	192	6.15e-12	65.5
MsaG046115	MtrunA17_Chr5g0431811	28.409	176	99	5	149	315	591	748	1.13e-11	65.9
MsaG046115	MtrunA17_Chr7g0244981	40.000	85	40	3	217	298	103	179	9.65e-11	61.6

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG046115	AT4G31550.1	54.518	332	100	11	1	305	1	308	1.67e-107	316
MsaG046115	AT4G31550.2	54.518	332	99	12	1	305	1	307	3.03e-106	313
MsaG046115	AT2G24570.1	51.039	337	101	12	1	305	1	305	1.64e-93	280
MsaG046115	AT4G31550.3	51.034	290	90	12	1	263	1	265	6.69e-76	234
MsaG046115	AT2G23320.1	40.523	306	133	9	18	301	20	298	2.37e-62	201
MsaG046115	AT4G24240.1	71.311	122	27	2	186	306	230	344	8.76e-55	182
MsaG046115	AT5G28650.1	36.527	334	150	8	19	304	4	323	9.73e-54	179
MsaG046115	AT3G04670.1	35.503	338	148	8	19	304	4	323	3.89e-51	172
MsaG046115	AT2G30590.1	57.718	149	52	3	161	300	224	370	2.43e-50	171
MsaG046115	AT2G23320.2	35.448	268	124	9	18	263	20	260	4.45e-36	131
MsaG046115	AT2G34830.1	62.069	87	28	2	219	300	186	272	1.93e-30	119
MsaG046115	AT2G34830.2	62.069	87	28	2	219	300	195	281	2.01e-30	119
MsaG046115	AT1G30650.1	56.842	95	36	2	219	308	188	282	2.11e-29	116
MsaG046115	AT1G29280.1	59.783	92	30	3	216	300	40	131	2.62e-29	113
MsaG046115	AT4G24240.2	70.886	79	15	2	186	263	230	301	1.22e-28	112
MsaG046115	AT3G04670.2	31.561	301	136	8	19	267	4	286	1.41e-27	109
MsaG046115	AT4G01250.1	59.036	83	29	1	218	300	108	185	2.73e-26	105
MsaG046115	AT3G58710.2	53.763	93	27	2	219	300	40	127	2.78e-26	105
MsaG046115	AT3G58710.1	53.763	93	27	2	219	300	41	128	8.61e-26	103
MsaG046115	AT5G52830.1	59.036	83	30	1	218	300	144	222	9.46e-26	105
MsaG046115	AT5G45050.2	53.012	83	35	1	218	300	1131	1209	7.64e-22	96.7
MsaG046115	AT5G45050.1	53.012	83	35	1	218	300	1159	1237	7.81e-22	96.7
MsaG046115	AT5G45050.4	53.012	83	35	1	218	300	1020	1098	8.31e-22	96.7
MsaG046115	AT4G23550.1	60.938	64	25	0	237	300	134	197	3.19e-21	92.4
MsaG046115	AT2G04880.1	54.930	71	31	1	230	300	294	363	8.30e-21	92.8
MsaG046115	AT2G04880.2	54.930	71	31	1	230	300	270	339	8.75e-21	92.8
MsaG046115	AT2G38470.1	47.191	89	43	2	227	312	343	430	9.72e-21	92.8
MsaG046115	AT2G38470.1	49.123	57	27	2	244	300	185	239	3.49e-11	64.3
MsaG046115	AT1G13960.2	37.584	149	73	5	155	300	181	312	3.51e-20	90.1
MsaG046115	AT1G13960.2	50.000	62	28	3	240	300	72	131	4.63e-13	69.3
MsaG046115	AT5G07100.2	51.852	81	37	2	220	300	119	197	4.58e-20	87.0
MsaG046115	AT5G07100.4	51.852	81	37	2	220	300	119	197	4.58e-20	87.0
MsaG046115	AT5G07100.5	51.852	81	37	2	220	300	119	197	4.58e-20	87.0
MsaG046115	AT5G07100.3	51.852	81	37	2	220	300	119	197	4.58e-20	87.0
MsaG046115	AT1G13960.1	47.368	95	36	3	219	300	372	465	5.23e-20	90.9
MsaG046115	AT1G13960.1	50.000	62	28	3	240	300	225	284	4.59e-13	70.1
MsaG046115	AT5G07100.1	42.718	103	56	2	200	300	189	290	7.74e-20	88.6
MsaG046115	AT5G26170.1	50.000	72	35	1	230	301	100	170	7.98e-20	85.5
MsaG046115	AT2G03340.1	46.809	94	37	3	219	300	379	471	2.33e-19	89.0
MsaG046115	AT2G03340.1	49.206	63	29	3	239	300	245	305	1.03e-12	68.9
MsaG046115	AT2G37260.3	50.602	83	40	1	218	300	244	325	3.90e-19	87.0
MsaG046115	AT2G37260.3	49.153	59	28	2	244	302	86	142	4.50e-11	63.5
MsaG046115	AT2G37260.2	50.602	83	40	1	218	300	242	323	4.10e-19	87.0
MsaG046115	AT2G37260.2	49.153	59	28	2	244	302	84	140	4.67e-11	63.5
MsaG046115	AT2G37260.1	50.602	83	40	1	218	300	324	405	5.83e-19	87.4
MsaG046115	AT2G37260.1	49.153	59	28	2	244	302	166	222	3.51e-11	63.9
MsaG046115	AT4G26640.5	52.703	74	34	1	227	300	189	261	5.85e-19	87.0
MsaG046115	AT4G26640.6	52.703	74	34	1	227	300	189	261	5.85e-19	87.0
MsaG046115	AT4G26640.4	52.703	74	34	1	227	300	189	261	5.85e-19	87.0
MsaG046115	AT4G26640.3	52.703	74	34	1	227	300	189	261	5.85e-19	87.0
MsaG046115	AT4G26640.2	52.703	74	34	1	227	300	365	437	9.52e-19	87.0
MsaG046115	AT4G26640.1	52.703	74	34	1	227	300	293	365	1.02e-18	86.7
MsaG046115	AT4G26640.7	52.703	74	34	1	227	300	325	397	1.09e-18	86.7
MsaG046115	AT5G45260.1	48.235	85	34	3	219	300	1190	1267	1.65e-18	86.7
MsaG046115	AT4G31800.2	46.575	73	39	0	228	300	96	168	2.15e-18	83.2
MsaG046115	AT4G31800.1	46.575	73	39	0	228	300	161	233	3.38e-18	84.0
MsaG046115	AT5G56270.1	47.872	94	37	3	218	300	451	543	4.70e-18	85.1
MsaG046115	AT5G49520.1	47.297	74	38	1	227	300	205	277	5.71e-18	84.3
MsaG046115	AT4G04450.2	48.649	74	38	0	227	300	182	255	6.89e-18	84.3
MsaG046115	AT1G29860.1	47.297	74	38	1	227	300	120	192	7.54e-18	82.4
MsaG046115	AT1G62300.1	48.649	74	38	0	227	300	296	369	1.20e-17	84.0
MsaG046115	AT4G18170.1	43.243	111	49	4	195	300	127	228	1.26e-17	82.4
MsaG046115	AT4G04450.1	48.649	74	38	0	227	300	276	349	1.45e-17	83.6
MsaG046115	AT4G22070.4	48.649	74	38	0	227	300	281	354	1.57e-17	83.6
MsaG046115	AT4G22070.3	48.649	74	38	0	227	300	281	354	1.57e-17	83.6
MsaG046115	AT4G22070.2	48.649	74	38	0	227	300	281	354	1.57e-17	83.6
MsaG046115	AT4G22070.1	48.649	74	38	0	227	300	281	354	1.57e-17	83.6
MsaG046115	AT4G39410.1	43.023	86	45	2	219	301	196	280	1.75e-17	81.6
MsaG046115	AT2G40740.1	41.905	105	53	3	202	298	126	230	2.02e-17	81.3
MsaG046115	AT2G40740.3	41.905	105	53	3	202	298	135	239	2.59e-17	81.3
MsaG046115	AT1G69310.4	41.667	96	49	4	220	311	121	213	3.63e-17	80.5
MsaG046115	AT1G69310.2	41.667	96	49	4	220	311	121	213	3.63e-17	80.5
MsaG046115	AT1G69310.1	41.667	96	49	4	220	311	121	213	3.63e-17	80.5
MsaG046115	AT4G26440.1	43.519	108	45	3	204	300	326	428	3.70e-17	82.4
MsaG046115	AT4G26440.1	47.458	59	29	2	244	302	179	235	1.67e-11	65.5
MsaG046115	AT2G47260.1	39.000	100	55	2	218	312	149	247	3.96e-17	81.3
MsaG046115	AT3G01080.2	46.914	81	39	2	223	300	321	400	8.86e-17	80.9
MsaG046115	AT3G01080.2	50.000	64	29	3	240	302	201	262	3.12e-13	70.5
MsaG046115	AT3G01080.1	46.914	81	39	2	223	300	283	362	9.03e-17	80.9
MsaG046115	AT3G01080.1	50.000	64	29	3	240	302	163	224	3.51e-13	70.1
MsaG046115	AT5G15130.2	38.168	131	63	6	186	301	116	243	1.01e-16	80.9
MsaG046115	AT5G15130.1	38.168	131	63	6	186	301	158	285	1.13e-16	80.9
MsaG046115	AT4G30935.1	33.813	139	70	4	184	304	257	391	1.76e-16	80.1
MsaG046115	AT1G64000.1	39.286	84	50	1	217	300	88	170	1.83e-16	76.6
MsaG046115	AT1G68150.1	53.448	58	27	0	243	300	235	292	4.94e-16	78.2
MsaG046115	AT3G62340.1	42.529	87	44	3	223	305	95	179	5.30e-16	77.0
MsaG046115	AT4G01720.1	46.250	80	37	2	221	300	223	296	6.25e-16	78.6
MsaG046115	AT1G55600.1	43.590	78	43	1	223	300	287	363	7.82e-16	78.2
MsaG046115	AT3G01970.1	49.206	63	31	1	239	301	61	122	1.14e-15	73.6
MsaG046115	AT2G44745.1	39.286	84	47	2	220	300	119	201	1.16e-15	75.1
MsaG046115	AT2G21900.1	44.186	86	41	3	219	300	83	165	1.17e-15	74.7
MsaG046115	AT5G41570.1	40.698	86	47	2	218	300	70	154	1.35e-15	73.9
MsaG046115	AT5G46350.1	46.479	71	37	1	230	300	170	239	1.39e-15	76.6
MsaG046115	AT5G64810.1	46.479	71	37	1	230	300	97	166	5.14e-15	72.8
MsaG046115	AT5G43290.1	49.367	79	35	3	223	300	96	170	9.44e-15	73.6
MsaG046115	AT1G80840.1	38.636	88	50	2	217	300	116	203	1.10e-14	73.6
MsaG046115	AT2G25000.2	49.123	57	29	0	244	300	104	160	1.21e-14	72.4
MsaG046115	AT2G25000.4	49.123	57	29	0	244	300	104	160	1.21e-14	72.4
MsaG046115	AT2G30250.1	52.459	61	28	1	240	300	325	384	1.43e-14	74.3
MsaG046115	AT1G18860.1	51.724	58	28	0	243	300	239	296	1.54e-14	74.3
MsaG046115	AT5G13080.1	46.774	62	32	1	239	300	63	123	1.80e-14	70.1
MsaG046115	AT2G25000.3	49.123	57	29	0	244	300	126	182	2.46e-14	72.0
MsaG046115	AT2G25000.1	49.123	57	29	0	244	300	147	203	3.20e-14	72.0
MsaG046115	AT4G11070.2	36.090	133	74	3	183	304	40	172	5.85e-14	71.2
MsaG046115	AT4G11070.1	36.090	133	74	3	183	304	72	204	6.77e-14	71.6
MsaG046115	AT2G46130.1	46.774	62	32	1	239	300	26	86	8.93e-14	67.0
MsaG046115	AT5G24110.1	40.217	92	52	2	218	307	89	179	1.38e-13	70.5
MsaG046115	AT1G66560.1	54.237	59	25	1	242	298	102	160	2.19e-13	69.3
MsaG046115	AT3G01080.3	51.613	62	27	3	240	300	201	260	2.33e-13	70.1
MsaG046115	AT4G23810.1	38.053	113	63	3	199	304	109	221	4.86e-13	69.3
MsaG046115	AT1G69310.3	39.583	96	47	5	220	311	121	209	6.51e-13	68.2
MsaG046115	AT1G69810.1	47.458	59	30	1	243	300	203	261	2.08e-12	67.8
MsaG046115	AT3G56400.1	39.286	84	41	2	217	298	102	177	2.33e-12	67.0
MsaG046115	AT1G69810.2	47.458	59	30	1	243	300	145	203	2.61e-12	67.0
MsaG046115	AT5G01900.1	50.000	60	28	1	241	298	108	167	3.43e-11	63.2
MsaG046115	AT1G66550.2	47.458	59	29	1	242	298	102	160	6.18e-11	62.0
MsaG046115	AT1G66550.1	47.458	59	29	1	242	298	107	165	6.44e-11	62.0

Find 68 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GCTATAAGCTTCCTTTGATT+TGG	0.254346	8:+80658742	None:intergenic
TGTTCATCCATCCTCATCTT+TGG	0.260460	8:+80659169	None:intergenic
TTGGATTTGACATGACTAAT+TGG	0.260726	8:+80658831	None:intergenic
TTGAGATTGGGATTTGGATT+TGG	0.315751	8:+80658812	None:intergenic
GGGTAAGGTGAACCTTTAAT+AGG	0.321141	8:+80658331	None:intergenic
CAGCGCCGGTTACGACGGTT+TGG	0.360565	8:+80658062	None:intergenic
ATAGGTAACAACAAGCATAT+TGG	0.370765	8:+80658105	None:intergenic
GGTTGAATCTTGAATTTCTC+AGG	0.376048	8:+80658887	None:intergenic
TAGGTAACAACAAGCATATT+GGG	0.376102	8:+80658106	None:intergenic
ATGCTTGTTGTTACCTATGA+AGG	0.398920	8:-80658100	MsaT046115.1:CDS
CACGCCCAAACCGTCGTAAC+CGG	0.404595	8:-80658067	MsaT046115.1:CDS
ATTCAAGAAGCTGCTTCTGC+TGG	0.410708	8:-80659139	MsaT046115.1:CDS
ATCGGAAACGCTTCCATCTC+CGG	0.412134	8:+80658682	None:intergenic
AGCGCCGGTTACGACGGTTT+GGG	0.420754	8:+80658063	None:intergenic
TTAGGTTTGAGATTGGGATT+TGG	0.423199	8:+80658806	None:intergenic
CACTGTTTCTAAGTTTAAAA+CGG	0.427675	8:-80658993	MsaT046115.1:CDS
TTCTGCTGGATTGAAAAGTA+TGG	0.429072	8:-80659125	MsaT046115.1:CDS
GAAGAGAACAATTCGTGTTC+CGG	0.431711	8:-80658419	MsaT046115.1:CDS
TTGCTTCATCTCACCGGAAA+AGG	0.439863	8:-80658619	MsaT046115.1:CDS
GTGACGGTGCTCTCCTTCAT+AGG	0.447462	8:+80658087	None:intergenic
AGCGTTTCCGATGGGAAAAT+CGG	0.462137	8:-80658671	MsaT046115.1:CDS
TGTCACGAAGCCACCATCTC+CGG	0.476339	8:-80658596	MsaT046115.1:CDS
TCAACGTAACCAACTAGATC+TGG	0.482987	8:-80659050	MsaT046115.1:CDS
AGACAAGATGGTTGTAGATC+CGG	0.492204	8:-80659200	None:intergenic
TATAAGTGTAGTAGCTTCAA+AGG	0.492847	8:-80658169	MsaT046115.1:CDS
ACCGGAGGATGAGACTTTGC+CGG	0.493124	8:+80658577	None:intergenic
ATAGAAAATTACCGTGGGTA+AGG	0.495916	8:+80658316	None:intergenic
GTTTATTAACCAGATCTAGT+TGG	0.498964	8:+80659041	None:intergenic
GGATGAGACTTTGCCGGAGA+TGG	0.499465	8:+80658583	None:intergenic
TCCGGCAAAGTCTCATCCTC+CGG	0.500468	8:-80658578	MsaT046115.1:CDS
CCCCTCTTGCTTCATCTCAC+CGG	0.500785	8:-80658625	MsaT046115.1:CDS
CTCCACGAAAATTCGTCTGA+TGG	0.502658	8:+80658370	None:intergenic
TGAAATTGAGAAGAAGAAGA+AGG	0.502708	8:+80658923	None:intergenic
CAAACCGTCGTAACCGGCGC+TGG	0.504594	8:-80658061	MsaT046115.1:CDS
AACGCTTCCATCTCCGGTGA+TGG	0.507110	8:+80658688	None:intergenic
ATCGGTCCTATCATTTCCTC+CGG	0.509860	8:-80658653	MsaT046115.1:CDS
CTCATCTTTGGAATCACTAC+CGG	0.510127	8:+80659181	None:intergenic
ATGTCCACCATCACCGGAGA+TGG	0.512485	8:-80658695	MsaT046115.1:CDS
TCTTTCATGTCCACCATCAC+CGG	0.515159	8:-80658701	MsaT046115.1:CDS
TAGTAGCTTCAAAGGATGTC+CGG	0.515213	8:-80658161	MsaT046115.1:CDS
ATTAACTTGTTAAATCGTAC+CGG	0.518687	8:-80658968	MsaT046115.1:CDS
CTTTCTACATGCTTCCTCGC+CGG	0.525809	8:+80658142	None:intergenic
ATCACCAGCGACGCTTAAAG+AGG	0.531601	8:+80658025	None:intergenic
CTTAGAGCAATGGCAGTGAC+CGG	0.532910	8:+80658559	None:intergenic
GAATCCAGCGCCGGTTACGA+CGG	0.554487	8:+80658057	None:intergenic
TTTACCTTCTCTTAGAGCAA+TGG	0.555901	8:+80658549	None:intergenic
GCTTCCATCTCCGGTGATGG+TGG	0.558489	8:+80658691	None:intergenic
TCCGGTGAGATGAAGCAAGA+GGG	0.562916	8:+80658624	None:intergenic
TGAGACTTTGCCGGAGATGG+TGG	0.571854	8:+80658586	None:intergenic
ACGACGAAAACGAGCATGAC+CGG	0.579228	8:+80658949	None:intergenic
TTTGACATGACTAATTGGAT+CGG	0.592954	8:+80658836	None:intergenic
TTCTCAATACTCCAAATCAA+AGG	0.597573	8:-80658753	MsaT046115.1:CDS
TTACGACGGTTTGGGCGTGA+CGG	0.599073	8:+80658071	None:intergenic
GGAGATGGAAGCGTTTCCGA+TGG	0.600674	8:-80658680	MsaT046115.1:CDS
GGCTTGCCGGAGGAAATGAT+AGG	0.601533	8:+80658647	None:intergenic
CGGTAGTGATTCCAAAGATG+AGG	0.606458	8:-80659180	MsaT046115.1:CDS
ACTGCCATTGCTCTAAGAGA+AGG	0.610372	8:-80658553	MsaT046115.1:intron
AGTGATTCCAAAGATGAGGA+TGG	0.614432	8:-80659176	MsaT046115.1:CDS
CTGAGATATGAATCCAGCGC+CGG	0.615026	8:+80658048	None:intergenic
GAGATGGAAGCGTTTCCGAT+GGG	0.631567	8:-80658679	MsaT046115.1:CDS
TTCCGGTGAGATGAAGCAAG+AGG	0.637613	8:+80658623	None:intergenic
CGGTGAGATGAAGCAAGAGG+GGG	0.640070	8:+80658626	None:intergenic
CCGGTGAGATGAAGCAAGAG+GGG	0.640954	8:+80658625	None:intergenic
TTAAAGGTTCACCTTACCCA+CGG	0.642405	8:-80658327	MsaT046115.1:intron
GGACATGAAAGACGAAGTAG+TGG	0.653461	8:+80658712	None:intergenic
AGAGCAATGGCAGTGACCGG+AGG	0.667641	8:+80658562	None:intergenic
GCTTCAAAGGATGTCCGGCG+AGG	0.702260	8:-80658156	MsaT046115.1:CDS
AAATCAAGAGTAGTTGACTG+TGG	0.752289	8:+80658866	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content

Chromosome	Type	Strat	End	Strand	Name
Chr8	gene	80658039	80659215	80658039	ID=MsaG046115
Chr8	mRNA	80658039	80659215	80658039	ID=MsaT046115.1;Parent=MsaG046115
Chr8	exon	80658039	80658198	80658039	ID=MsaT046115.1.exon3;Parent=MsaT046115.1
Chr8	CDS	80658039	80658198	80658039	ID=cds.MsaT046115.1;Parent=MsaT046115.1
Chr8	exon	80658328	80658453	80658328	ID=MsaT046115.1.exon2;Parent=MsaT046115.1
Chr8	CDS	80658328	80658453	80658328	ID=cds.MsaT046115.1;Parent=MsaT046115.1
Chr8	exon	80658554	80659215	80658554	ID=MsaT046115.1.exon1;Parent=MsaT046115.1
Chr8	CDS	80658554	80659215	80658554	ID=cds.MsaT046115.1;Parent=MsaT046115.1

Gene Sequence

>MsaT046115.1

ATGGTTGTAGATCCGGTAGTGATTCCAAAGATGAGGATGGATGAACAAAGAGCTATTCAAGAAGCTGCTTCTGCTGGATTGAAAAGTATGGAGCAACTAATTCACGTGCTTTCTTCTCAAACTTCATCTTCTTGTTCTTCAAATCAACGTAACCAACTAGATCTGGTTAATAAACTTGATTGTACTGAAATTACTGATTTCACTGTTTCTAAGTTTAAAACGGTTATTAACTTGTTAAATCGTACCGGTCATGCTCGTTTTCGTCGTGCACCTTCTTCTTCTTCTCAATTTCAATCTCTTATTCAACCTGAGAAATTCAAGATTCAACCACAGTCAACTACTCTTGATTTTGCAAAACCGATCCAATTAGTCATGTCAAATCCAAATCCAAATCCCAATCTCAAACCTAAAACTAATCAATCTACTCTTGATTTATCTGTTTCTCAATACTCCAAATCAAAGGAAGCTTATAGCATCTCTACCACTACTTCGTCTTTCATGTCCACCATCACCGGAGATGGAAGCGTTTCCGATGGGAAAATCGGTCCTATCATTTCCTCCGGCAAGCCCCCTCTTGCTTCATCTCACCGGAAAAGGTGTCACGAAGCCACCATCTCCGGCAAAGTCTCATCCTCCGGTCACTGCCATTGCTCTAAGAGAAGGAAATCTCGTGTGAAGAGAACAATTCGTGTTCCGGCGATAAGTTCAAAAGTCGCTGATATTCCATCAGACGAATTTTCGTGGAGGAAATACGGTCAAAAACCTATTAAAGGTTCACCTTACCCACGTGGTTACTATAAGTGTAGTAGCTTCAAAGGATGTCCGGCGAGGAAGCATGTAGAAAGAGCACAAGACGATCCCAATATGCTTGTTGTTACCTATGAAGGAGAGCACCGTCACGCCCAAACCGTCGTAACCGGCGCTGGATTCATATCTCAGCCTCTTTAA

Protein sequence

>MsaT046115.1

MVVDPVVIPKMRMDEQRAIQEAASAGLKSMEQLIHVLSSQTSSSCSSNQRNQLDLVNKLDCTEITDFTVSKFKTVINLLNRTGHARFRRAPSSSSQFQSLIQPEKFKIQPQSTTLDFAKPIQLVMSNPNPNPNLKPKTNQSTLDLSVSQYSKSKEAYSISTTTSSFMSTITGDGSVSDGKIGPIISSGKPPLASSHRKRCHEATISGKVSSSGHCHCSKRRKSRVKRTIRVPAISSKVADIPSDEFSWRKYGQKPIKGSPYPRGYYKCSSFKGCPARKHVERAQDDPNMLVVTYEGEHRHAQTVVTGAGFISQPL*