Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG046352 | AES92578.2 | 92.384 | 604 | 38 | 3 | 1 | 604 | 1 | 596 | 0.0 | 1110 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG046352 | sp|A2X1N2|ORR24_ORYSI | 44.250 | 400 | 183 | 8 | 15 | 389 | 23 | 407 | 3.31e-97 | 313 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG046352 | tr|G7JHZ1|G7JHZ1_MEDTR | 92.384 | 604 | 38 | 3 | 1 | 604 | 1 | 596 | 0.0 | 1110 |
Gene ID | Type | Classification |
---|---|---|
MsaG046352 | TF | GARP-ARR-B |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsaG000151 | MsaG046352 | 0.818915 | 2.668719e-52 | 5.704043e-50 |
MsaG000163 | MsaG046352 | 0.810921 | 1.552441e-50 | 2.711310e-48 |
MsaG000242 | MsaG046352 | 0.829524 | 8.807487e-55 | 2.514376e-52 |
MsaG000648 | MsaG046352 | 0.803674 | 5.245068e-49 | 7.711211e-47 |
MsaG000796 | MsaG046352 | 0.806822 | 1.158178e-49 | 1.832547e-47 |
MsaG000968 | MsaG046352 | 0.817777 | 4.815911e-52 | 9.994275e-50 |
MsaG001037 | MsaG046352 | 0.839364 | 3.054484e-57 | 1.168757e-54 |
MsaG001713 | MsaG046352 | 0.826974 | 3.602921e-54 | 9.573108e-52 |
MsaG001765 | MsaG046352 | 0.803794 | 4.954913e-49 | 7.304759e-47 |
MsaG001909 | MsaG046352 | 0.813707 | 3.852369e-51 | 7.208769e-49 |
MsaG002885 | MsaG046352 | 0.830519 | 5.047899e-55 | 1.482683e-52 |
MsaG003545 | MsaG046352 | 0.813457 | 4.369339e-51 | 8.125171e-49 |
MsaG003658 | MsaG046352 | 0.815103 | 1.898237e-51 | 3.678954e-49 |
MsaG003662 | MsaG046352 | 0.836389 | 1.761469e-56 | 6.151656e-54 |
MsaG003730 | MsaG046352 | 0.806484 | 1.363482e-49 | 2.140422e-47 |
MsaG003778 | MsaG046352 | 0.808075 | 6.298823e-50 | 1.026891e-47 |
MsaG003891 | MsaG046352 | 0.802213 | 1.048133e-48 | 1.489935e-46 |
MsaG004029 | MsaG046352 | 0.824440 | 1.428240e-53 | 3.538224e-51 |
MsaG004324 | MsaG046352 | 0.813466 | 4.349699e-51 | 8.090390e-49 |
MsaG004654 | MsaG046352 | 0.801104 | 1.764994e-48 | 2.446558e-46 |
MsaG004718 | MsaG046352 | 0.803821 | 4.892052e-49 | 7.216538e-47 |
MsaG004887 | MsaG046352 | 0.809968 | 2.487632e-50 | 4.244868e-48 |
MsaG004987 | MsaG046352 | 0.804546 | 3.462486e-49 | 5.194311e-47 |
MsaG005078 | MsaG046352 | 0.805892 | 1.814786e-49 | 2.809162e-47 |
MsaG005100 | MsaG046352 | 0.806525 | 1.336830e-49 | 2.100563e-47 |
MsaG005573 | MsaG046352 | 0.806768 | 1.188665e-49 | 1.878469e-47 |
MsaG005641 | MsaG046352 | 0.803852 | 4.821175e-49 | 7.116995e-47 |
MsaG005728 | MsaG046352 | 0.835180 | 3.554348e-56 | 1.196955e-53 |
MsaG005995 | MsaG046352 | 0.806856 | 1.138989e-49 | 1.803639e-47 |
MsaG006143 | MsaG046352 | 0.807857 | 7.002619e-50 | 1.135708e-47 |
MsaG006085 | MsaG046352 | 0.848637 | 1.023064e-59 | 5.293171e-57 |
MsaG006240 | MsaG046352 | 0.824296 | 1.543167e-53 | 3.808038e-51 |
MsaG006635 | MsaG046352 | 0.832772 | 1.414210e-55 | 4.434611e-53 |
MsaG006638 | MsaG046352 | 0.810519 | 1.895072e-50 | 3.277444e-48 |
MsaG006741 | MsaG046352 | 0.818655 | 3.055064e-52 | 6.485619e-50 |
MsaG006786 | MsaG046352 | 0.803154 | 6.715358e-49 | 9.754580e-47 |
MsaG006934 | MsaG046352 | 0.822418 | 4.218175e-53 | 9.892725e-51 |
MsaG006940 | MsaG046352 | 0.800834 | 2.002682e-48 | 2.759202e-46 |
MsaG007030 | MsaG046352 | 0.831137 | 3.567914e-55 | 1.066785e-52 |
MsaG007279 | MsaG046352 | 0.803102 | 6.884188e-49 | 9.988000e-47 |
MsaG007403 | MsaG046352 | 0.826787 | 3.990360e-54 | 1.054733e-51 |
MsaG007683 | MsaG046352 | 0.800920 | 1.924047e-48 | 2.655929e-46 |
MsaG007966 | MsaG046352 | 0.800789 | 2.045621e-48 | 2.815585e-46 |
MsaG008003 | MsaG046352 | 0.842366 | 5.026206e-58 | 2.114832e-55 |
MsaG008155 | MsaG046352 | 0.818892 | 2.699739e-52 | 5.766893e-50 |
MsaG008238 | MsaG046352 | 0.806493 | 1.357585e-49 | 2.131590e-47 |
MsaG008357 | MsaG046352 | 0.840810 | 1.286647e-57 | 5.152039e-55 |
MsaG008428 | MsaG046352 | 0.801919 | 1.203789e-48 | 1.699803e-46 |
MsaG010119 | MsaG046352 | 0.802423 | 9.491893e-49 | 1.355840e-46 |
MsaG010637 | MsaG046352 | 0.881150 | 6.463543e-70 | 1.230696e-66 |
MsaG010644 | MsaG046352 | 0.804606 | 3.363079e-49 | 5.052160e-47 |
MsaG010890 | MsaG046352 | 0.835867 | 2.386489e-56 | 8.203915e-54 |
MsaG010978 | MsaG046352 | 0.809043 | 3.921350e-50 | 6.543798e-48 |
MsaG011508 | MsaG046352 | 0.811768 | 1.018686e-50 | 1.816446e-48 |
MsaG011972 | MsaG046352 | 0.802920 | 7.504265e-49 | 1.084168e-46 |
MsaG012498 | MsaG046352 | 0.819268 | 2.219087e-52 | 4.787506e-50 |
MsaG012576 | MsaG046352 | 0.813380 | 4.541314e-51 | 8.428721e-49 |
MsaG041985 | MsaG046352 | 0.817561 | 5.386407e-52 | 1.111620e-49 |
MsaG042070 | MsaG046352 | 0.845146 | 9.134668e-59 | 4.205630e-56 |
MsaG042071 | MsaG046352 | 0.801396 | 1.538905e-48 | 2.147349e-46 |
MsaG042511 | MsaG046352 | 0.813756 | 3.757985e-51 | 7.040889e-49 |
MsaG042795 | MsaG046352 | 0.817750 | 4.885256e-52 | 1.013078e-49 |
MsaG043695 | MsaG046352 | 0.854688 | 2.011945e-61 | 1.285383e-58 |
MsaG043879 | MsaG046352 | 0.805189 | 2.544220e-49 | 3.874214e-47 |
MsaG044049 | MsaG046352 | 0.810480 | 1.931362e-50 | 3.337109e-48 |
MsaG044107 | MsaG046352 | 0.828505 | 1.550652e-54 | 4.301113e-52 |
MsaG044499 | MsaG046352 | 0.834647 | 4.832233e-56 | 1.601696e-53 |
MsaG044546 | MsaG046352 | 0.812918 | 5.730222e-51 | 1.051309e-48 |
MsaG044938 | MsaG046352 | 0.812108 | 8.597441e-51 | 1.545860e-48 |
MsaG045045 | MsaG046352 | 0.806454 | 1.383822e-49 | 2.170798e-47 |
MsaG045290 | MsaG046352 | 0.800434 | 2.414178e-48 | 3.296308e-46 |
MsaG045331 | MsaG046352 | 0.804822 | 3.032934e-49 | 4.579235e-47 |
MsaG045510 | MsaG046352 | 0.852311 | 9.615698e-61 | 5.647256e-58 |
MsaG045822 | MsaG046352 | 0.816564 | 9.000279e-52 | 1.810326e-49 |
MsaG045986 | MsaG046352 | 0.818498 | 3.315030e-52 | 7.008685e-50 |
MsaG046018 | MsaG046352 | 0.820668 | 1.065406e-52 | 2.384880e-50 |
MsaG046203 | MsaG046352 | 0.813284 | 4.765864e-51 | 8.824060e-49 |
MsaG046352 | MsaG046660 | 0.808294 | 5.657622e-50 | 9.272439e-48 |
MsaG046352 | MsaG046771 | 0.813201 | 4.969031e-51 | 9.181361e-49 |
MsaG046352 | MsaG046981 | 0.816686 | 8.450918e-52 | 1.705172e-49 |
MsaG046352 | MsaG001966 | 0.816886 | 7.628041e-52 | 1.547082e-49 |
MsaG046352 | MsaG002578 | 0.875381 | 6.684078e-68 | 9.773869e-65 |
MsaG046352 | MsaG009468 | 0.821408 | 7.209010e-53 | 1.645691e-50 |
MsaG046352 | MsaG008963 | 0.814747 | 2.275225e-51 | 4.370196e-49 |
MsaG046352 | MsaG012667 | 0.819950 | 1.553519e-52 | 3.412266e-50 |
MsaG046352 | MsaG011821 | 0.852349 | 9.378261e-61 | 5.515336e-58 |
MsaG046352 | MsaG018216 | 0.834020 | 6.931519e-56 | 2.254638e-53 |
MsaG046352 | MsaG019915 | 0.801483 | 1.477560e-48 | 2.065774e-46 |
MsaG046352 | MsaG028977 | 0.805381 | 2.320640e-49 | 3.549434e-47 |
MsaG046352 | MsaG028220 | 0.807703 | 7.548743e-50 | 1.219744e-47 |
MsaG046352 | MsaG033426 | 0.800893 | 1.948360e-48 | 2.687869e-46 |
MsaG046352 | MsaG032757 | 0.805454 | 2.240335e-49 | 3.432486e-47 |
MsaG046352 | MsaG032991 | 0.833079 | 1.187587e-55 | 3.757626e-53 |
MsaG046352 | MsaG032427 | 0.822376 | 4.313891e-53 | 1.010592e-50 |
MsaG046352 | MsaG031599 | 0.821059 | 8.670008e-53 | 1.961080e-50 |
MsaG046352 | MsaG033167 | 0.824133 | 1.685179e-53 | 4.139924e-51 |
MsaG046352 | MsaG033035 | 0.805229 | 2.496334e-49 | 3.804760e-47 |
MsaG046352 | MsaG036962 | 0.804194 | 4.095441e-49 | 6.093978e-47 |
MsaG046352 | MsaG039788 | 0.800800 | 2.035261e-48 | 2.801978e-46 |
MsaG046352 | MsaG037527 | 0.824612 | 1.301737e-53 | 3.239851e-51 |
MsaG046352 | MsaG036408 | 0.827547 | 2.629512e-54 | 7.100180e-52 |
MsaG046352 | MsaG043306 | 0.828464 | 1.585544e-54 | 4.393019e-52 |
MsaG012639 | MsaG046352 | 0.831847 | 2.389976e-55 | 7.295847e-53 |
MsaG012814 | MsaG046352 | 0.865149 | 1.454613e-64 | 1.382589e-61 |
MsaG013974 | MsaG046352 | 0.858834 | 1.228134e-62 | 9.135484e-60 |
MsaG014465 | MsaG046352 | 0.856860 | 4.700529e-62 | 3.249523e-59 |
MsaG015145 | MsaG046352 | 0.815653 | 1.434706e-51 | 2.819689e-49 |
MsaG016329 | MsaG046352 | 0.818525 | 3.268997e-52 | 6.916375e-50 |
MsaG016433 | MsaG046352 | 0.828353 | 1.686056e-54 | 4.656826e-52 |
MsaG016436 | MsaG046352 | 0.851826 | 1.318305e-60 | 7.611487e-58 |
MsaG016536 | MsaG046352 | 0.814070 | 3.206343e-51 | 6.054770e-49 |
MsaG017017 | MsaG046352 | 0.804368 | 3.769572e-49 | 5.631767e-47 |
MsaG017023 | MsaG046352 | 0.820335 | 1.269631e-52 | 2.817338e-50 |
MsaG017187 | MsaG046352 | 0.816470 | 9.445144e-52 | 1.895198e-49 |
MsaG017529 | MsaG046352 | 0.841317 | 9.481707e-58 | 3.858145e-55 |
MsaG018082 | MsaG046352 | 0.801493 | 1.470330e-48 | 2.056153e-46 |
MsaG018598 | MsaG046352 | 0.838407 | 5.386871e-57 | 2.000669e-54 |
MsaG018689 | MsaG046352 | 0.811077 | 1.436861e-50 | 2.519107e-48 |
MsaG018722 | MsaG046352 | 0.808553 | 4.986818e-50 | 8.223932e-48 |
MsaG018897 | MsaG046352 | 0.836025 | 2.177416e-56 | 7.520822e-54 |
MsaG019118 | MsaG046352 | 0.839870 | 2.259495e-57 | 8.784813e-55 |
MsaG019122 | MsaG046352 | 0.833509 | 9.287550e-56 | 2.976106e-53 |
MsaG019567 | MsaG046352 | 0.809370 | 3.339455e-50 | 5.616620e-48 |
MsaG020149 | MsaG046352 | 0.824499 | 1.383138e-53 | 3.432056e-51 |
MsaG020161 | MsaG046352 | 0.819182 | 2.321023e-52 | 4.996091e-50 |
MsaG020287 | MsaG046352 | 0.800820 | 2.016458e-48 | 2.777294e-46 |
MsaG020418 | MsaG046352 | 0.829953 | 6.931834e-55 | 2.003466e-52 |
MsaG020509 | MsaG046352 | 0.808042 | 6.401179e-50 | 1.042754e-47 |
MsaG020532 | MsaG046352 | 0.801396 | 1.538905e-48 | 2.147349e-46 |
MsaG020716 | MsaG046352 | 0.822154 | 4.855197e-53 | 1.130609e-50 |
MsaG020834 | MsaG046352 | 0.833224 | 1.093383e-55 | 3.474522e-53 |
MsaG020981 | MsaG046352 | 0.803688 | 5.210843e-49 | 7.663325e-47 |
MsaG021291 | MsaG046352 | 0.816126 | 1.126221e-51 | 2.240162e-49 |
MsaG021395 | MsaG046352 | 0.808869 | 4.270603e-50 | 7.096930e-48 |
MsaG021650 | MsaG046352 | 0.800199 | 2.694186e-48 | 3.658980e-46 |
MsaG022007 | MsaG046352 | 0.810091 | 2.340897e-50 | 4.006480e-48 |
MsaG022868 | MsaG046352 | 0.804876 | 2.956011e-49 | 4.468668e-47 |
MsaG022933 | MsaG046352 | 0.827887 | 2.180996e-54 | 5.945398e-52 |
MsaG023641 | MsaG046352 | 0.815460 | 1.583325e-51 | 3.096504e-49 |
MsaG023698 | MsaG046352 | 0.816666 | 8.540120e-52 | 1.722224e-49 |
MsaG023893 | MsaG046352 | 0.828924 | 1.229106e-54 | 3.449337e-52 |
MsaG024139 | MsaG046352 | 0.819106 | 2.415691e-52 | 5.189390e-50 |
MsaG024303 | MsaG046352 | 0.800442 | 2.405555e-48 | 3.285126e-46 |
MsaG024329 | MsaG046352 | 0.806889 | 1.120808e-49 | 1.776245e-47 |
MsaG024615 | MsaG046352 | 0.835213 | 3.485480e-56 | 1.174939e-53 |
MsaG024879 | MsaG046352 | 0.819564 | 1.901240e-52 | 4.133423e-50 |
MsaG025644 | MsaG046352 | 0.823143 | 2.866100e-53 | 6.854480e-51 |
MsaG026891 | MsaG046352 | 0.804996 | 2.790764e-49 | 4.230604e-47 |
MsaG027248 | MsaG046352 | 0.821576 | 6.595279e-53 | 1.512316e-50 |
MsaG027499 | MsaG046352 | 0.810238 | 2.177323e-50 | 3.739899e-48 |
MsaG027557 | MsaG046352 | 0.810841 | 1.615674e-50 | 2.816242e-48 |
MsaG027567 | MsaG046352 | 0.819765 | 1.711828e-52 | 3.741303e-50 |
MsaG027590 | MsaG046352 | 0.821751 | 6.011240e-53 | 1.384838e-50 |
MsaG027756 | MsaG046352 | 0.800722 | 2.110805e-48 | 2.900889e-46 |
MsaG027845 | MsaG046352 | 0.812438 | 7.287084e-51 | 1.321100e-48 |
MsaG028248 | MsaG046352 | 0.803968 | 4.561530e-49 | 6.751990e-47 |
MsaG028620 | MsaG046352 | 0.832432 | 1.715383e-55 | 5.326050e-53 |
MsaG029063 | MsaG046352 | 0.834504 | 5.247284e-56 | 1.731805e-53 |
MsaG029370 | MsaG046352 | 0.802327 | 9.932658e-49 | 1.415697e-46 |
MsaG030196 | MsaG046352 | 0.821773 | 5.942068e-53 | 1.369675e-50 |
MsaG030708 | MsaG046352 | 0.837712 | 8.115842e-57 | 2.950274e-54 |
MsaG030899 | MsaG046352 | 0.864945 | 1.685380e-64 | 1.588768e-61 |
MsaG031007 | MsaG046352 | 0.812308 | 7.776846e-51 | 1.405309e-48 |
MsaG031494 | MsaG046352 | 0.822341 | 4.395041e-53 | 1.028640e-50 |
MsaG031781 | MsaG046352 | 0.857892 | 2.336177e-62 | 1.677788e-59 |
MsaG032491 | MsaG046352 | 0.814262 | 2.910088e-51 | 5.521901e-49 |
MsaG032970 | MsaG046352 | 0.809262 | 3.521890e-50 | 5.907947e-48 |
MsaG033640 | MsaG046352 | 0.810577 | 1.841185e-50 | 3.188745e-48 |
MsaG034778 | MsaG046352 | 0.815335 | 1.687408e-51 | 3.289646e-49 |
MsaG035267 | MsaG046352 | 0.812680 | 6.455833e-51 | 1.177430e-48 |
MsaG035659 | MsaG046352 | 0.815755 | 1.361749e-51 | 2.683133e-49 |
MsaG035779 | MsaG046352 | 0.803122 | 6.817810e-49 | 9.896268e-47 |
MsaG035835 | MsaG046352 | 0.810646 | 1.778905e-50 | 3.086120e-48 |
MsaG036122 | MsaG046352 | 0.805654 | 2.034884e-49 | 3.132304e-47 |
MsaG036468 | MsaG046352 | 0.804044 | 4.397943e-49 | 6.521723e-47 |
MsaG036856 | MsaG046352 | 0.815347 | 1.676460e-51 | 3.269390e-49 |
MsaG036935 | MsaG046352 | 0.822922 | 3.225380e-53 | 7.667854e-51 |
MsaG038682 | MsaG046352 | 0.806210 | 1.556886e-49 | 2.428229e-47 |
MsaG039573 | MsaG046352 | 0.802883 | 7.634387e-49 | 1.102065e-46 |
MsaG039727 | MsaG046352 | 0.800745 | 2.088229e-48 | 2.871337e-46 |
MsaG039901 | MsaG046352 | 0.804868 | 2.966881e-49 | 4.484292e-47 |
MsaG040028 | MsaG046352 | 0.806316 | 1.479199e-49 | 2.312827e-47 |
MsaG040732 | MsaG046352 | 0.832450 | 1.698667e-55 | 5.276787e-53 |
MsaG040850 | MsaG046352 | 0.806528 | 1.335023e-49 | 2.097887e-47 |
MsaG041299 | MsaG046352 | 0.832905 | 1.311188e-55 | 4.127619e-53 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG046352 | MtrunA17_Chr4g0074401 | 92.384 | 604 | 38 | 3 | 1 | 604 | 1 | 596 | 0.0 | 1110 |
MsaG046352 | MtrunA17_Chr4g0074411 | 78.000 | 600 | 121 | 4 | 1 | 599 | 2 | 591 | 0.0 | 909 |
MsaG046352 | MtrunA17_Chr2g0304841 | 43.353 | 662 | 291 | 18 | 3 | 595 | 4 | 650 | 5.95e-139 | 420 |
MsaG046352 | MtrunA17_Chr3g0137101 | 49.850 | 333 | 153 | 4 | 14 | 341 | 5 | 328 | 7.53e-92 | 296 |
MsaG046352 | MtrunA17_Chr4g0074421 | 73.822 | 191 | 41 | 1 | 66 | 256 | 1 | 182 | 2.73e-88 | 272 |
MsaG046352 | MtrunA17_Chr1g0149841 | 47.788 | 339 | 158 | 6 | 15 | 341 | 3 | 334 | 1.24e-87 | 281 |
MsaG046352 | MtrunA17_Chr4g0067981 | 42.040 | 402 | 170 | 11 | 15 | 382 | 29 | 401 | 1.88e-80 | 267 |
MsaG046352 | MtrunA17_Chr2g0294911 | 42.424 | 363 | 187 | 6 | 6 | 357 | 18 | 369 | 4.95e-80 | 264 |
MsaG046352 | MtrunA17_Chr1g0161431 | 47.855 | 303 | 134 | 5 | 16 | 304 | 10 | 302 | 9.04e-80 | 264 |
MsaG046352 | MtrunA17_Chr1g0149851 | 43.363 | 339 | 167 | 7 | 15 | 332 | 3 | 337 | 1.30e-74 | 248 |
MsaG046352 | MtrunA17_Chr7g0275401 | 49.805 | 257 | 120 | 3 | 13 | 266 | 1 | 251 | 2.64e-74 | 239 |
MsaG046352 | MtrunA17_Chr3g0123131 | 51.154 | 260 | 107 | 4 | 16 | 267 | 12 | 259 | 3.50e-74 | 248 |
MsaG046352 | MtrunA17_Chr8g0376881 | 50.980 | 255 | 113 | 3 | 17 | 268 | 25 | 270 | 3.80e-74 | 246 |
MsaG046352 | MtrunA17_Chr7g0275891 | 47.925 | 265 | 115 | 4 | 15 | 263 | 3 | 260 | 1.02e-72 | 237 |
MsaG046352 | MtrunA17_Chr3g0134461 | 46.888 | 241 | 71 | 4 | 17 | 256 | 8 | 192 | 1.43e-52 | 178 |
MsaG046352 | MtrunA17_Chr1g0149831 | 49.746 | 197 | 80 | 4 | 76 | 266 | 1 | 184 | 1.19e-49 | 172 |
MsaG046352 | MtrunA17_Chr3g0134481 | 60.769 | 130 | 51 | 0 | 11 | 140 | 2 | 131 | 7.10e-45 | 157 |
MsaG046352 | MtrunA17_Chr3g0134481 | 62.264 | 53 | 20 | 0 | 206 | 258 | 131 | 183 | 2.92e-15 | 74.7 |
MsaG046352 | MtrunA17_Chr4g0009901 | 35.433 | 254 | 132 | 5 | 17 | 270 | 10 | 231 | 6.10e-43 | 155 |
MsaG046352 | MtrunA17_Chr4g0009851 | 33.858 | 254 | 136 | 5 | 17 | 270 | 11 | 232 | 2.46e-42 | 154 |
MsaG046352 | MtrunA17_Chr6g0471041 | 31.439 | 264 | 144 | 4 | 1 | 263 | 1 | 228 | 2.10e-36 | 140 |
MsaG046352 | MtrunA17_Chr4g0009981 | 33.014 | 209 | 109 | 3 | 62 | 270 | 2 | 179 | 5.57e-32 | 124 |
MsaG046352 | MtrunA17_Chr8g0391911 | 32.331 | 266 | 130 | 6 | 13 | 256 | 5 | 242 | 7.14e-28 | 112 |
MsaG046352 | MtrunA17_Chr8g0350761 | 27.799 | 259 | 167 | 6 | 20 | 262 | 20 | 274 | 7.08e-26 | 111 |
MsaG046352 | MtrunA17_Chr4g0031961 | 56.818 | 88 | 35 | 1 | 177 | 264 | 104 | 188 | 1.74e-22 | 98.6 |
MsaG046352 | MtrunA17_Chr3g0127941 | 29.911 | 224 | 138 | 7 | 21 | 237 | 56 | 267 | 7.70e-22 | 100 |
MsaG046352 | MtrunA17_Chr6g0473731 | 34.503 | 171 | 82 | 4 | 96 | 263 | 8 | 151 | 1.01e-21 | 98.6 |
MsaG046352 | MtrunA17_Chr8g0383961 | 33.113 | 151 | 98 | 1 | 1 | 151 | 1 | 148 | 1.74e-21 | 94.7 |
MsaG046352 | MtrunA17_Chr7g0276361 | 30.256 | 195 | 114 | 3 | 18 | 206 | 11 | 189 | 1.78e-21 | 98.6 |
MsaG046352 | MtrunA17_Chr8g0345901 | 37.600 | 125 | 75 | 2 | 23 | 144 | 38 | 162 | 2.78e-21 | 98.2 |
MsaG046352 | MtrunA17_Chr7g0255711 | 55.000 | 80 | 36 | 0 | 185 | 264 | 69 | 148 | 3.35e-21 | 94.4 |
MsaG046352 | MtrunA17_Chr6g0456631 | 34.058 | 138 | 88 | 2 | 13 | 148 | 5 | 141 | 1.67e-20 | 89.0 |
MsaG046352 | MtrunA17_Chr4g0009991 | 36.486 | 148 | 62 | 3 | 109 | 256 | 1 | 116 | 1.04e-19 | 85.5 |
MsaG046352 | MtrunA17_Chr4g0030271 | 36.691 | 139 | 81 | 4 | 5 | 139 | 75 | 210 | 1.19e-19 | 93.6 |
MsaG046352 | MtrunA17_Chr1g0181811 | 36.885 | 122 | 74 | 2 | 21 | 139 | 85 | 206 | 3.40e-19 | 92.0 |
MsaG046352 | MtrunA17_Chr4g0011071 | 29.167 | 168 | 88 | 4 | 63 | 230 | 35 | 171 | 1.58e-18 | 83.6 |
MsaG046352 | MtrunA17_Chr4g0061021 | 30.986 | 142 | 90 | 2 | 21 | 159 | 33 | 169 | 3.97e-17 | 85.1 |
MsaG046352 | MtrunA17_Chr3g0091641 | 30.894 | 123 | 82 | 1 | 21 | 140 | 24 | 146 | 5.60e-17 | 84.3 |
MsaG046352 | MtrunA17_Chr4g0054981 | 60.656 | 61 | 24 | 0 | 200 | 260 | 303 | 363 | 4.05e-16 | 81.6 |
MsaG046352 | MtrunA17_Chr4g0054981 | 36.508 | 126 | 76 | 2 | 15 | 139 | 12 | 134 | 9.61e-15 | 77.4 |
MsaG046352 | MtrunA17_Chr5g0400241 | 59.016 | 61 | 25 | 0 | 200 | 260 | 304 | 364 | 5.74e-16 | 81.3 |
MsaG046352 | MtrunA17_Chr5g0400241 | 37.302 | 126 | 75 | 2 | 15 | 139 | 12 | 134 | 1.27e-14 | 77.0 |
MsaG046352 | MtrunA17_Chr1g0198601 | 51.389 | 72 | 33 | 2 | 196 | 266 | 201 | 271 | 3.59e-14 | 74.7 |
MsaG046352 | MtrunA17_Chr4g0040481 | 50.909 | 55 | 27 | 0 | 205 | 259 | 156 | 210 | 5.00e-13 | 71.2 |
MsaG046352 | MtrunA17_Chr2g0324891 | 50.909 | 55 | 27 | 0 | 205 | 259 | 159 | 213 | 1.21e-12 | 70.1 |
MsaG046352 | MtrunA17_Chr7g0274471 | 55.000 | 60 | 26 | 1 | 207 | 265 | 218 | 277 | 3.52e-12 | 68.9 |
MsaG046352 | MtrunA17_Chr1g0190301 | 50.000 | 64 | 31 | 1 | 203 | 265 | 171 | 234 | 3.53e-12 | 68.6 |
MsaG046352 | MtrunA17_Chr4g0062921 | 47.059 | 68 | 35 | 1 | 204 | 270 | 232 | 299 | 5.99e-12 | 68.2 |
MsaG046352 | MtrunA17_Chr7g0261911 | 51.562 | 64 | 30 | 1 | 203 | 265 | 258 | 321 | 7.18e-12 | 68.2 |
MsaG046352 | MtrunA17_Chr5g0423031 | 37.037 | 81 | 50 | 1 | 17 | 97 | 10 | 89 | 7.85e-12 | 64.3 |
MsaG046352 | MtrunA17_Chr1g0170741 | 27.941 | 136 | 83 | 3 | 21 | 141 | 8 | 143 | 1.19e-11 | 64.3 |
MsaG046352 | MtrunA17_Chr2g0321461 | 53.333 | 60 | 27 | 1 | 203 | 261 | 41 | 100 | 1.70e-11 | 66.2 |
MsaG046352 | MtrunA17_Chr5g0414931 | 29.444 | 180 | 104 | 8 | 21 | 181 | 16 | 191 | 3.20e-11 | 63.9 |
MsaG046352 | MtrunA17_Chr6g0461641 | 51.667 | 60 | 28 | 1 | 203 | 261 | 38 | 97 | 3.27e-11 | 65.5 |
MsaG046352 | MtrunA17_Chr5g0417521 | 52.542 | 59 | 27 | 1 | 203 | 260 | 11 | 69 | 3.96e-11 | 65.1 |
MsaG046352 | MtrunA17_Chr4g0059571 | 27.972 | 143 | 88 | 5 | 15 | 142 | 17 | 159 | 5.32e-11 | 62.8 |
MsaG046352 | MtrunA17_Chr8g0352871 | 26.241 | 141 | 84 | 3 | 22 | 142 | 10 | 150 | 8.36e-11 | 61.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG046352 | AT2G25180.1 | 45.918 | 392 | 188 | 8 | 1 | 381 | 1 | 379 | 7.89e-92 | 295 |
MsaG046352 | AT4G31920.1 | 49.560 | 341 | 137 | 10 | 1 | 330 | 1 | 317 | 2.89e-83 | 271 |
MsaG046352 | AT5G58080.1 | 44.652 | 374 | 183 | 7 | 9 | 376 | 6 | 361 | 8.11e-83 | 272 |
MsaG046352 | AT3G16857.1 | 43.567 | 342 | 165 | 6 | 15 | 333 | 31 | 367 | 4.62e-78 | 261 |
MsaG046352 | AT3G16857.2 | 43.567 | 342 | 165 | 6 | 15 | 333 | 31 | 367 | 8.92e-78 | 260 |
MsaG046352 | AT1G67710.1 | 54.510 | 255 | 103 | 4 | 18 | 267 | 8 | 254 | 1.87e-72 | 242 |
MsaG046352 | AT2G01760.1 | 45.055 | 273 | 121 | 3 | 13 | 269 | 3 | 262 | 5.81e-67 | 223 |
MsaG046352 | AT3G16857.3 | 42.857 | 301 | 144 | 6 | 56 | 333 | 2 | 297 | 1.37e-63 | 221 |
MsaG046352 | AT2G01760.2 | 41.137 | 299 | 119 | 4 | 15 | 269 | 5 | 290 | 4.27e-61 | 208 |
MsaG046352 | AT5G49240.1 | 39.357 | 249 | 140 | 3 | 11 | 256 | 32 | 272 | 3.80e-49 | 173 |
MsaG046352 | AT1G67710.2 | 51.777 | 197 | 82 | 4 | 76 | 267 | 1 | 189 | 1.31e-46 | 171 |
MsaG046352 | AT2G01760.3 | 44.762 | 210 | 87 | 4 | 76 | 269 | 1 | 197 | 1.10e-43 | 159 |
MsaG046352 | AT1G49190.1 | 32.492 | 317 | 177 | 10 | 17 | 322 | 30 | 320 | 2.06e-41 | 155 |
MsaG046352 | AT3G62670.1 | 34.948 | 289 | 147 | 9 | 36 | 311 | 54 | 314 | 2.86e-38 | 147 |
MsaG046352 | AT1G67710.3 | 47.727 | 176 | 79 | 4 | 97 | 267 | 13 | 180 | 9.12e-34 | 134 |
MsaG046352 | AT5G07210.2 | 30.996 | 271 | 163 | 5 | 21 | 269 | 16 | 284 | 2.36e-31 | 129 |
MsaG046352 | AT5G07210.1 | 30.466 | 279 | 162 | 6 | 21 | 269 | 16 | 292 | 7.32e-29 | 122 |
MsaG046352 | AT2G27070.1 | 28.328 | 293 | 183 | 7 | 9 | 276 | 4 | 294 | 1.87e-27 | 117 |
MsaG046352 | AT4G18020.8 | 30.678 | 339 | 139 | 9 | 15 | 259 | 12 | 348 | 3.71e-27 | 115 |
MsaG046352 | AT4G18020.11 | 30.678 | 339 | 139 | 9 | 15 | 259 | 12 | 348 | 3.71e-27 | 115 |
MsaG046352 | AT4G18020.4 | 30.678 | 339 | 139 | 9 | 15 | 259 | 12 | 348 | 3.71e-27 | 115 |
MsaG046352 | AT4G18020.5 | 30.678 | 339 | 139 | 9 | 15 | 259 | 12 | 348 | 3.71e-27 | 115 |
MsaG046352 | AT4G18020.10 | 30.678 | 339 | 139 | 9 | 15 | 259 | 12 | 348 | 3.71e-27 | 115 |
MsaG046352 | AT4G18020.7 | 30.678 | 339 | 139 | 9 | 15 | 259 | 12 | 348 | 3.71e-27 | 115 |
MsaG046352 | AT4G18020.3 | 30.678 | 339 | 139 | 9 | 15 | 259 | 12 | 348 | 6.33e-27 | 115 |
MsaG046352 | AT4G18020.2 | 30.678 | 339 | 139 | 9 | 15 | 259 | 12 | 348 | 6.33e-27 | 115 |
MsaG046352 | AT4G18020.1 | 30.678 | 339 | 139 | 9 | 15 | 259 | 12 | 348 | 6.33e-27 | 115 |
MsaG046352 | AT4G18020.6 | 30.678 | 339 | 139 | 9 | 15 | 259 | 12 | 348 | 6.33e-27 | 115 |
MsaG046352 | AT4G18020.9 | 30.678 | 339 | 139 | 9 | 15 | 259 | 12 | 348 | 6.33e-27 | 115 |
MsaG046352 | AT5G59570.2 | 54.945 | 91 | 41 | 0 | 174 | 264 | 108 | 198 | 4.53e-24 | 103 |
MsaG046352 | AT5G59570.1 | 54.945 | 91 | 41 | 0 | 174 | 264 | 108 | 198 | 4.53e-24 | 103 |
MsaG046352 | AT1G49190.2 | 38.400 | 125 | 77 | 0 | 17 | 141 | 30 | 154 | 9.16e-24 | 106 |
MsaG046352 | AT1G49190.2 | 34.722 | 144 | 66 | 10 | 194 | 322 | 405 | 535 | 7.89e-11 | 65.5 |
MsaG046352 | AT3G46640.2 | 61.333 | 75 | 29 | 0 | 190 | 264 | 127 | 201 | 1.78e-22 | 99.4 |
MsaG046352 | AT3G46640.1 | 61.333 | 75 | 29 | 0 | 190 | 264 | 127 | 201 | 1.78e-22 | 99.4 |
MsaG046352 | AT2G46790.3 | 37.209 | 129 | 78 | 2 | 21 | 146 | 37 | 165 | 2.18e-22 | 100 |
MsaG046352 | AT3G46640.3 | 61.333 | 75 | 29 | 0 | 190 | 264 | 127 | 201 | 2.55e-22 | 98.6 |
MsaG046352 | AT2G46790.1 | 37.209 | 129 | 78 | 2 | 21 | 146 | 37 | 165 | 2.85e-22 | 100 |
MsaG046352 | AT5G24470.1 | 31.847 | 157 | 103 | 3 | 19 | 172 | 48 | 203 | 8.53e-22 | 100 |
MsaG046352 | AT3G10760.1 | 61.429 | 70 | 27 | 0 | 195 | 264 | 93 | 162 | 2.53e-21 | 95.9 |
MsaG046352 | AT5G05090.1 | 57.895 | 76 | 32 | 0 | 189 | 264 | 63 | 138 | 4.30e-21 | 94.0 |
MsaG046352 | AT2G40970.1 | 59.155 | 71 | 29 | 0 | 194 | 264 | 92 | 162 | 3.08e-20 | 90.9 |
MsaG046352 | AT5G60100.7 | 37.795 | 127 | 75 | 3 | 17 | 139 | 59 | 185 | 9.83e-20 | 92.4 |
MsaG046352 | AT5G60100.6 | 37.795 | 127 | 75 | 3 | 17 | 139 | 59 | 185 | 9.83e-20 | 92.4 |
MsaG046352 | AT5G60100.4 | 37.795 | 127 | 75 | 3 | 17 | 139 | 59 | 185 | 9.83e-20 | 92.4 |
MsaG046352 | AT5G60100.5 | 37.795 | 127 | 75 | 3 | 17 | 139 | 59 | 185 | 1.83e-19 | 92.4 |
MsaG046352 | AT5G60100.3 | 37.795 | 127 | 75 | 3 | 17 | 139 | 59 | 185 | 1.83e-19 | 92.4 |
MsaG046352 | AT5G60100.1 | 37.795 | 127 | 75 | 3 | 17 | 139 | 59 | 185 | 1.83e-19 | 92.4 |
MsaG046352 | AT5G60100.2 | 37.795 | 127 | 75 | 3 | 17 | 139 | 59 | 185 | 2.79e-19 | 92.0 |
MsaG046352 | AT5G02810.1 | 36.885 | 122 | 74 | 2 | 21 | 139 | 78 | 199 | 1.02e-17 | 87.8 |
MsaG046352 | AT1G68210.1 | 26.241 | 282 | 168 | 7 | 23 | 270 | 15 | 290 | 2.42e-17 | 86.7 |
MsaG046352 | AT5G61380.1 | 33.333 | 123 | 79 | 1 | 21 | 140 | 19 | 141 | 1.12e-16 | 84.0 |
MsaG046352 | AT5G44190.2 | 58.333 | 60 | 25 | 0 | 200 | 259 | 140 | 199 | 3.30e-16 | 80.9 |
MsaG046352 | AT5G44190.1 | 58.333 | 60 | 25 | 0 | 200 | 259 | 140 | 199 | 3.55e-16 | 81.3 |
MsaG046352 | AT2G20570.1 | 45.000 | 80 | 42 | 1 | 180 | 259 | 128 | 205 | 3.45e-13 | 72.4 |
MsaG046352 | AT2G03500.1 | 44.000 | 75 | 41 | 1 | 206 | 279 | 232 | 306 | 1.70e-12 | 70.1 |
MsaG046352 | AT2G20570.2 | 62.500 | 48 | 18 | 0 | 212 | 259 | 174 | 221 | 2.10e-12 | 70.1 |
MsaG046352 | AT1G79430.2 | 43.750 | 96 | 34 | 3 | 203 | 297 | 30 | 106 | 2.63e-12 | 68.9 |
MsaG046352 | AT1G25550.1 | 45.333 | 75 | 38 | 2 | 195 | 266 | 195 | 269 | 4.10e-12 | 68.6 |
MsaG046352 | AT5G45580.1 | 47.761 | 67 | 34 | 1 | 207 | 272 | 7 | 73 | 4.88e-12 | 67.0 |
MsaG046352 | AT5G45580.2 | 47.761 | 67 | 34 | 1 | 207 | 272 | 23 | 89 | 5.10e-12 | 67.4 |
MsaG046352 | AT2G01060.1 | 50.000 | 72 | 32 | 2 | 191 | 261 | 2 | 70 | 1.11e-11 | 66.2 |
MsaG046352 | AT1G19050.1 | 27.389 | 157 | 99 | 4 | 1 | 142 | 1 | 157 | 1.24e-11 | 64.7 |
MsaG046352 | AT1G68670.1 | 42.169 | 83 | 42 | 2 | 185 | 266 | 198 | 275 | 1.52e-11 | 66.6 |
MsaG046352 | AT5G18240.2 | 55.000 | 60 | 26 | 1 | 203 | 261 | 41 | 100 | 1.88e-11 | 66.6 |
MsaG046352 | AT5G18240.3 | 55.000 | 60 | 26 | 1 | 203 | 261 | 41 | 100 | 1.88e-11 | 66.6 |
MsaG046352 | AT3G04030.1 | 53.333 | 60 | 27 | 1 | 203 | 261 | 41 | 100 | 1.89e-11 | 66.6 |
MsaG046352 | AT3G04030.3 | 53.333 | 60 | 27 | 1 | 203 | 261 | 41 | 100 | 2.02e-11 | 66.6 |
MsaG046352 | AT5G18240.5 | 55.000 | 60 | 26 | 1 | 203 | 261 | 41 | 100 | 2.07e-11 | 66.6 |
MsaG046352 | AT5G18240.1 | 55.000 | 60 | 26 | 1 | 203 | 261 | 41 | 100 | 2.11e-11 | 66.6 |
MsaG046352 | AT5G18240.4 | 55.000 | 60 | 26 | 1 | 203 | 261 | 41 | 100 | 2.11e-11 | 66.6 |
MsaG046352 | AT1G10470.3 | 30.000 | 130 | 79 | 3 | 21 | 138 | 20 | 149 | 5.61e-11 | 63.5 |
MsaG046352 | AT1G74890.1 | 26.154 | 130 | 84 | 2 | 21 | 138 | 18 | 147 | 6.96e-11 | 62.8 |
Find 116 sgRNAs with CRISPR-Local
Find sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCTCGCTCAGTTCTCAATTT+AGG | 0.173828 | 8:-83685270 | MsaT046352.1:CDS |
AGCTTGAATCCATCCATTTC+TGG | 0.203555 | 8:+83686979 | None:intergenic |
TTATAGTTTGTACCTGTAAA+TGG | 0.224166 | 8:+83686187 | None:intergenic |
TGAAAACTCGAGTGCTTTAA+AGG | 0.227005 | 8:-83685644 | MsaT046352.1:CDS |
AAACAATGGCTGCTTGTAAC+TGG | 0.250042 | 8:+83685675 | None:intergenic |
CGTCATTGATGTTCCTTTAG+AGG | 0.255703 | 8:-83685218 | MsaT046352.1:CDS |
TATTAGCTTGGGGTACATTA+TGG | 0.266193 | 8:+83685056 | None:intergenic |
GGAAGAAGCCTCGTTTAGTT+TGG | 0.283283 | 8:-83686482 | MsaT046352.1:CDS |
TCCTGTGGGAATGCATGTTC+TGG | 0.298859 | 8:-83688143 | MsaT046352.1:CDS |
CTTCTCATGTGCAAGTATAA+TGG | 0.318350 | 8:-83688076 | MsaT046352.1:intron |
GAGAAAGAAGATTGAAAGTA+AGG | 0.340472 | 8:-83686685 | MsaT046352.1:CDS |
TGAGGCATCTGAGTGATTAA+TGG | 0.341513 | 8:+83685031 | None:intergenic |
CAATGTCAAGATGGATTACT+TGG | 0.343348 | 8:-83685187 | MsaT046352.1:CDS |
AAGAATTCAGTAGCTGGATA+TGG | 0.366836 | 8:-83685859 | MsaT046352.1:CDS |
AGTGCATTTACAGATTCTTC+TGG | 0.369412 | 8:-83685535 | MsaT046352.1:CDS |
GAAGAAGCCTCGTTTAGTTT+GGG | 0.371171 | 8:-83686481 | MsaT046352.1:CDS |
TTATTCAGATGAAAGAACTA+TGG | 0.373116 | 8:-83684996 | MsaT046352.1:CDS |
CATTGCATCGTTTCCTCTAA+AGG | 0.374710 | 8:+83685205 | None:intergenic |
AGGACTGGAAGCAAAGTTAT+AGG | 0.378746 | 8:+83685351 | None:intergenic |
GATGGCTTTGGAGAATCCTT+TGG | 0.383986 | 8:-83688194 | MsaT046352.1:CDS |
TCTCAAAAGGCCATCTAAAC+AGG | 0.387755 | 8:-83685917 | MsaT046352.1:CDS |
GATAAATGTTCCGGTGAAAC+TGG | 0.391840 | 8:+83685596 | None:intergenic |
TCAGTAATGATACCTTTATT+CGG | 0.392934 | 8:+83686660 | None:intergenic |
AAATGTGGCTAGCCATTTAC+AGG | 0.398143 | 8:-83686199 | MsaT046352.1:intron |
CTCTTGAATTATGTGTTTGT+AGG | 0.401274 | 8:+83685446 | None:intergenic |
ATTCTGGTTCATGATGGCTT+TGG | 0.405441 | 8:-83688206 | None:intergenic |
TCTACTCTAGCCTGTTTAGA+TGG | 0.413458 | 8:+83685907 | None:intergenic |
GAAAGTAAGGATCCGAATAA+AGG | 0.416092 | 8:-83686672 | MsaT046352.1:CDS |
CTTAAGATTCTTCTTGATCC+AGG | 0.420041 | 8:+83685820 | None:intergenic |
TGTCGGCTGAACGCACCATC+TGG | 0.422911 | 8:-83685760 | MsaT046352.1:CDS |
TGAGCAAGTTGGACATGAAA+TGG | 0.425491 | 8:-83686953 | MsaT046352.1:CDS |
TTCAGAATAGTTGTTTGCCT+TGG | 0.425668 | 8:-83684919 | MsaT046352.1:CDS |
GAGCAATTGCTTGATGTAGA+TGG | 0.426617 | 8:-83684947 | MsaT046352.1:CDS |
TTTATAAATCACCCATCTGT+TGG | 0.434200 | 8:-83685421 | MsaT046352.1:CDS |
AATGCACTTGAATCATCAAT+TGG | 0.435178 | 8:+83685550 | None:intergenic |
GATTAATGGACTATTAGCTT+GGG | 0.435758 | 8:+83685045 | None:intergenic |
GAAAACGCAGAAGAAGATAA+TGG | 0.437835 | 8:-83686534 | MsaT046352.1:CDS |
TACCAGGTGGATAAATGTTC+CGG | 0.439267 | 8:+83685587 | None:intergenic |
CATCTAGTAACATGTATTGT+CGG | 0.449068 | 8:-83685777 | MsaT046352.1:CDS |
TCTCTTGCTTCTTCTAATGC+AGG | 0.449172 | 8:-83685094 | MsaT046352.1:CDS |
TAACATTAGCTCTGATGTCT+TGG | 0.449900 | 8:+83685509 | None:intergenic |
CACCGGAACATTTATCCACC+TGG | 0.455890 | 8:-83685589 | MsaT046352.1:CDS |
TTGGAGGTTGAAGATGTCTT+CGG | 0.457510 | 8:-83688175 | MsaT046352.1:CDS |
TTATAGGAACCACTTGTAGC+AGG | 0.464041 | 8:+83685367 | None:intergenic |
AATACAAACTTAGTCTCAAA+AGG | 0.473606 | 8:-83685930 | MsaT046352.1:CDS |
TGGAAGAGCTTAAGAACATA+TGG | 0.475204 | 8:-83686719 | MsaT046352.1:CDS |
GGAGATTTGTGTACCTTACC+TGG | 0.477382 | 8:-83685838 | MsaT046352.1:CDS |
TGATTAATGGACTATTAGCT+TGG | 0.477988 | 8:+83685044 | None:intergenic |
TGATGTAAACATGCCAGAAA+TGG | 0.478571 | 8:-83686992 | MsaT046352.1:CDS |
TTCTTCCTTCAACAATACCT+TGG | 0.480791 | 8:-83685119 | MsaT046352.1:CDS |
TTAAGCTCTTCCAATCGGAT+TGG | 0.487989 | 8:+83686729 | None:intergenic |
TCAAACTTGTCTCAAACTGT+TGG | 0.489304 | 8:-83688107 | MsaT046352.1:CDS |
TGTTCTTAAGCTCTTCCAAT+CGG | 0.493421 | 8:+83686724 | None:intergenic |
GGCTTTGGAGAATCCTTTGG+AGG | 0.494937 | 8:-83688191 | MsaT046352.1:CDS |
CTCACTCAATGGAGAAGGAC+TGG | 0.495705 | 8:+83685336 | None:intergenic |
TGAATGTTGAAGGGCTTACA+AGG | 0.497287 | 8:-83686224 | MsaT046352.1:CDS |
GAAAGAACTATGGAATCAAA+TGG | 0.497837 | 8:-83684986 | MsaT046352.1:CDS |
CAGTCCTTCTCCATTGAGTG+AGG | 0.499289 | 8:-83685335 | MsaT046352.1:CDS |
CTACAAAAGAATTCAGTAGC+TGG | 0.500934 | 8:-83685865 | MsaT046352.1:CDS |
ATCTGTTGGAGGTCCTGCTA+TGG | 0.503540 | 8:-83685407 | MsaT046352.1:CDS |
GAAAACTCGAGTGCTTTAAA+GGG | 0.504861 | 8:-83685643 | MsaT046352.1:CDS |
AGAATCCAAGGTATTGTTGA+AGG | 0.506294 | 8:+83685114 | None:intergenic |
TTATTAAAATCCTCACTCAA+TGG | 0.507785 | 8:+83685325 | None:intergenic |
CAGGAAATGATGATAGAGAG+AGG | 0.513398 | 8:-83686797 | MsaT046352.1:CDS |
TGTGATCATATAGTGTTGTC+AGG | 0.513792 | 8:-83686816 | MsaT046352.1:intron |
AGAAGAAGCAAGAGAATCCA+AGG | 0.514940 | 8:+83685102 | None:intergenic |
AATAAAGGTATCATTACTGA+TGG | 0.516274 | 8:-83686657 | MsaT046352.1:CDS |
GGACTTAAGTTCATGTTACC+AGG | 0.516544 | 8:+83685571 | None:intergenic |
TTCAAGCTCCTTGAGCAAGT+TGG | 0.519096 | 8:-83686964 | MsaT046352.1:CDS |
GATTCTTCTTGATCCAGGTA+AGG | 0.519260 | 8:+83685825 | None:intergenic |
AACAATGGCTGCTTGTAACT+GGG | 0.528436 | 8:+83685676 | None:intergenic |
GAATAAAATTTCTCAACTTG+AGG | 0.529905 | 8:+83685013 | None:intergenic |
GTCACATAAACTCACTATCA+AGG | 0.536123 | 8:+83686412 | None:intergenic |
TTCACTTATTGTATCATCCA+AGG | 0.536142 | 8:+83684902 | None:intergenic |
TCTTGTGAAACCAATCCGAT+TGG | 0.545613 | 8:-83686739 | MsaT046352.1:CDS |
TGTGACTTGATGAATGTTGA+AGG | 0.547972 | 8:-83686234 | MsaT046352.1:CDS |
ATAAATCACCCATCTGTTGG+AGG | 0.552382 | 8:-83685418 | MsaT046352.1:CDS |
GTGTGTGAGCTTACTGATGA+AGG | 0.556710 | 8:+83686924 | None:intergenic |
TAATGCAGGCACTAGTTCCA+TGG | 0.559067 | 8:-83685080 | MsaT046352.1:CDS |
ATGATGAGGAACGCTCGACT+CGG | 0.562718 | 8:-83686503 | MsaT046352.1:CDS |
AGGAAATGATGATAGAGAGA+GGG | 0.563967 | 8:-83686796 | MsaT046352.1:CDS |
TTTCATGTCCAACTTGCTCA+AGG | 0.564395 | 8:+83686956 | None:intergenic |
TGGAAATTAACCAGTTTCAC+CGG | 0.564960 | 8:-83685606 | MsaT046352.1:CDS |
ATGTTACTAGATGCATATGT+TGG | 0.572114 | 8:+83685787 | None:intergenic |
AAATCCTCACTCAATGGAGA+AGG | 0.576468 | 8:+83685331 | None:intergenic |
ATAGCAGGACCTCCAACAGA+TGG | 0.581262 | 8:+83685409 | None:intergenic |
GAAACGATGCAATGTCAAGA+TGG | 0.581317 | 8:-83685196 | MsaT046352.1:CDS |
CCATCTGGATTGAACTTGAG+AGG | 0.585944 | 8:-83685745 | MsaT046352.1:CDS |
TATAGGAACCACTTGTAGCA+GGG | 0.588786 | 8:+83685368 | None:intergenic |
AAAGGGTGTTCGAACGTCAG+TGG | 0.592037 | 8:-83685626 | MsaT046352.1:CDS |
ATTACTTGGGAATGTTGTAA+CGG | 0.596089 | 8:-83685173 | MsaT046352.1:CDS |
GATAGAGAGAGGGTGATGAA+AGG | 0.596610 | 8:-83686786 | MsaT046352.1:CDS |
CCTCTCAAGTTCAATCCAGA+TGG | 0.601365 | 8:+83685745 | None:intergenic |
GTAAACATGCCAGAAATGGA+TGG | 0.605525 | 8:-83686988 | MsaT046352.1:CDS |
TAGCAGGACCTCCAACAGAT+GGG | 0.607030 | 8:+83685410 | None:intergenic |
AAGACATCTTCAACCTCCAA+AGG | 0.613959 | 8:+83688178 | None:intergenic |
ATAAAGGTATCATTACTGAT+GGG | 0.617908 | 8:-83686656 | MsaT046352.1:CDS |
CCTAAATTGAGAACTGAGCG+AGG | 0.617995 | 8:+83685270 | None:intergenic |
GCCAGAACATGCATTCCCAC+AGG | 0.618067 | 8:+83688142 | None:intergenic |
GTGATGAAAGGTGTGATGAA+AGG | 0.623017 | 8:-83686774 | MsaT046352.1:CDS |
TTACACGCAGCAGCAAAATG+TGG | 0.623240 | 8:-83685143 | MsaT046352.1:CDS |
AGGGCTTACAAGGGAAAATG+TGG | 0.634196 | 8:-83686214 | MsaT046352.1:CDS |
ATTAATGGACTATTAGCTTG+GGG | 0.634710 | 8:+83685046 | None:intergenic |
GTATCTATAGTTAGTCAACT+CGG | 0.636343 | 8:-83686435 | MsaT046352.1:CDS |
TAATGGTAGAGAGAATGATG+AGG | 0.638904 | 8:-83686517 | MsaT046352.1:CDS |
TACACGCAGCAGCAAAATGT+GGG | 0.639739 | 8:-83685142 | MsaT046352.1:CDS |
TGAGCTTACTGATGAAGGGT+AGG | 0.644624 | 8:+83686929 | None:intergenic |
GTGACTTGATGAATGTTGAA+GGG | 0.645884 | 8:-83686233 | MsaT046352.1:CDS |
AATGTCAAGATGGATTACTT+GGG | 0.659008 | 8:-83685186 | MsaT046352.1:CDS |
TGTGTGAGCTTACTGATGAA+GGG | 0.665662 | 8:+83686925 | None:intergenic |
CTTAAGTTCATGTTACCAGG+TGG | 0.668465 | 8:+83685574 | None:intergenic |
GAATGTTGAAGGGCTTACAA+GGG | 0.675399 | 8:-83686223 | MsaT046352.1:CDS |
TCATCATCCCAAACTAAACG+AGG | 0.691444 | 8:+83686474 | None:intergenic |
TTGGGGTACATTATGGACCA+TGG | 0.694419 | 8:+83685063 | None:intergenic |
GCTAACAAGAATAAAACCCG+TGG | 0.697003 | 8:-83686600 | MsaT046352.1:CDS |
AGAACTATGGAATCAAATGG+TGG | 0.707711 | 8:-83684983 | MsaT046352.1:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr8 | gene | 83684907 | 83688215 | 83684907 | ID=MsaG046352 |
Chr8 | mRNA | 83684907 | 83688215 | 83684907 | ID=MsaT046352.1;Parent=MsaG046352 |
Chr8 | exon | 83684907 | 83685953 | 83684907 | ID=MsaT046352.1.exon5;Parent=MsaT046352.1 |
Chr8 | CDS | 83684907 | 83685953 | 83684907 | ID=cds.MsaT046352.1;Parent=MsaT046352.1 |
Chr8 | exon | 83686200 | 83686276 | 83686200 | ID=MsaT046352.1.exon4;Parent=MsaT046352.1 |
Chr8 | CDS | 83686200 | 83686276 | 83686200 | ID=cds.MsaT046352.1;Parent=MsaT046352.1 |
Chr8 | exon | 83686427 | 83686825 | 83686427 | ID=MsaT046352.1.exon3;Parent=MsaT046352.1 |
Chr8 | CDS | 83686427 | 83686825 | 83686427 | ID=cds.MsaT046352.1;Parent=MsaT046352.1 |
Chr8 | exon | 83686938 | 83687090 | 83686938 | ID=MsaT046352.1.exon2;Parent=MsaT046352.1 |
Chr8 | CDS | 83686938 | 83687090 | 83686938 | ID=cds.MsaT046352.1;Parent=MsaT046352.1 |
Chr8 | exon | 83688077 | 83688215 | 83688077 | ID=MsaT046352.1.exon1;Parent=MsaT046352.1 |
Chr8 | CDS | 83688077 | 83688215 | 83688077 | ID=cds.MsaT046352.1;Parent=MsaT046352.1 |
Gene Sequence |
Protein sequence |