Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG046419 | XP_003610463.2 | 93.400 | 500 | 26 | 6 | 1 | 495 | 1 | 498 | 0.0 | 843 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG046419 | sp|Q9C519|WRKY6_ARATH | 50.688 | 509 | 186 | 17 | 10 | 473 | 50 | 538 | 4.37e-124 | 376 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG046419 | tr|A0A396IHD7|A0A396IHD7_MEDTR | 93.400 | 500 | 26 | 6 | 1 | 495 | 1 | 498 | 0.0 | 843 |
Gene ID | Type | Classification |
---|---|---|
MsaG046419 | TF | WRKY |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsaG000356 | MsaG046419 | 0.805229 | 2.496334e-49 | 3.804760e-47 |
MsaG003526 | MsaG046419 | 0.820107 | 1.430637e-52 | 3.155520e-50 |
MsaG003567 | MsaG046419 | 0.835787 | 2.499800e-56 | 8.572862e-54 |
MsaG004100 | MsaG046419 | 0.864806 | 1.862342e-64 | 1.745898e-61 |
MsaG004419 | MsaG046419 | 0.807046 | 1.038608e-49 | 1.652096e-47 |
MsaG005297 | MsaG046419 | 0.817239 | 6.357397e-52 | 1.301235e-49 |
MsaG005541 | MsaG046419 | 0.845976 | 5.454937e-59 | 2.581455e-56 |
MsaG005924 | MsaG046419 | 0.852380 | 9.192493e-61 | 5.411673e-58 |
MsaG005966 | MsaG046419 | 0.807569 | 8.058183e-50 | 1.297812e-47 |
MsaG006783 | MsaG046419 | 0.808577 | 4.927942e-50 | 8.131661e-48 |
MsaG007255 | MsaG046419 | 0.872239 | 7.591240e-67 | 9.677471e-64 |
MsaG008109 | MsaG046419 | 0.865796 | 9.119828e-65 | 8.894761e-62 |
MsaG010949 | MsaG046419 | 0.891460 | 8.611886e-74 | 2.740018e-70 |
MsaG011531 | MsaG046419 | 0.837421 | 9.629955e-57 | 3.469893e-54 |
MsaG012333 | MsaG046419 | 0.827371 | 2.897068e-54 | 7.783947e-52 |
MsaG012282 | MsaG046419 | 0.804310 | 3.874456e-49 | 5.780770e-47 |
MsaG044337 | MsaG046419 | 0.924458 | 1.802327e-89 | 4.736414e-85 |
MsaG045081 | MsaG046419 | 0.800735 | 2.098233e-48 | 2.884406e-46 |
MsaG045598 | MsaG046419 | 0.931682 | 7.255927e-94 | 3.390607e-89 |
MsaG045649 | MsaG046419 | 0.816378 | 9.897606e-52 | 1.981411e-49 |
MsaG045653 | MsaG046419 | 0.810358 | 2.052164e-50 | 3.535278e-48 |
MsaG046244 | MsaG046419 | 0.813788 | 3.697893e-51 | 6.934072e-49 |
MsaG046419 | MsaG047031 | 0.880700 | 9.358893e-70 | 1.745534e-66 |
MsaG046419 | MsaG047049 | 0.813565 | 4.136670e-51 | 7.713563e-49 |
MsaG046419 | MsaG014699 | 0.818250 | 3.770142e-52 | 7.919935e-50 |
MsaG046419 | MsaG013523 | 0.805952 | 1.763200e-49 | 2.733111e-47 |
MsaG046419 | MsaG023461 | 0.808296 | 5.653845e-50 | 9.266535e-48 |
MsaG046419 | MsaG019962 | 0.808513 | 5.084374e-50 | 8.376859e-48 |
MsaG046419 | MsaG028857 | 0.802741 | 8.164599e-49 | 1.174743e-46 |
MsaG046419 | MsaG031432 | 0.812069 | 8.763659e-51 | 1.574254e-48 |
MsaG046419 | MsaG030537 | 0.875245 | 7.432211e-68 | 1.080387e-64 |
MsaG046419 | MsaG030572 | 0.815160 | 1.844708e-51 | 3.580303e-49 |
MsaG046419 | MsaG030436 | 0.868373 | 1.384570e-65 | 1.499838e-62 |
MsaG046419 | MsaG031301 | 0.832122 | 2.045641e-55 | 6.294955e-53 |
MsaG046419 | MsaG036926 | 0.847113 | 2.678613e-59 | 1.316593e-56 |
MsaG046419 | MsaG035322 | 0.845736 | 6.334561e-59 | 2.974087e-56 |
MsaG046419 | MsaG037135 | 0.818510 | 3.293102e-52 | 6.964694e-50 |
MsaG046419 | MsaG037983 | 0.818060 | 4.161123e-52 | 8.698539e-50 |
MsaG017397 | MsaG046419 | 0.833466 | 9.517601e-56 | 3.046010e-53 |
MsaG017530 | MsaG046419 | 0.816764 | 8.119201e-52 | 1.641577e-49 |
MsaG017776 | MsaG046419 | 0.814504 | 2.573384e-51 | 4.912769e-49 |
MsaG018223 | MsaG046419 | 0.819025 | 2.519079e-52 | 5.399992e-50 |
MsaG018662 | MsaG046419 | 0.839679 | 2.531207e-57 | 9.782333e-55 |
MsaG018701 | MsaG046419 | 0.845926 | 5.626880e-59 | 2.658410e-56 |
MsaG018986 | MsaG046419 | 0.821335 | 7.493610e-53 | 1.707388e-50 |
MsaG019439 | MsaG046419 | 0.807978 | 6.603435e-50 | 1.074053e-47 |
MsaG019675 | MsaG046419 | 0.878812 | 4.357119e-69 | 7.445271e-66 |
MsaG019728 | MsaG046419 | 0.918725 | 2.773764e-86 | 4.766577e-82 |
MsaG019770 | MsaG046419 | 0.838562 | 4.916321e-57 | 1.834818e-54 |
MsaG019917 | MsaG046419 | 0.802141 | 1.084089e-48 | 1.538504e-46 |
MsaG019924 | MsaG046419 | 0.815917 | 1.253390e-51 | 2.479849e-49 |
MsaG019930 | MsaG046419 | 0.806364 | 1.444922e-49 | 2.261800e-47 |
MsaG019974 | MsaG046419 | 0.846658 | 3.562566e-59 | 1.724570e-56 |
MsaG020823 | MsaG046419 | 0.845301 | 8.295764e-59 | 3.838869e-56 |
MsaG021043 | MsaG046419 | 0.816275 | 1.043678e-51 | 2.083870e-49 |
MsaG021703 | MsaG046419 | 0.801014 | 1.840738e-48 | 2.546400e-46 |
MsaG022114 | MsaG046419 | 0.806552 | 1.319557e-49 | 2.074742e-47 |
MsaG023694 | MsaG046419 | 0.830823 | 4.258031e-55 | 1.261619e-52 |
MsaG024094 | MsaG046419 | 0.818356 | 3.568329e-52 | 7.516543e-50 |
MsaG024106 | MsaG046419 | 0.934927 | 5.333166e-96 | 3.255980e-91 |
MsaG024316 | MsaG046419 | 0.810482 | 1.930141e-50 | 3.335105e-48 |
MsaG026956 | MsaG046419 | 0.805556 | 2.133457e-49 | 3.276390e-47 |
MsaG027083 | MsaG046419 | 0.809311 | 3.437325e-50 | 5.772856e-48 |
MsaG027881 | MsaG046419 | 0.807672 | 7.662487e-50 | 1.237171e-47 |
MsaG028062 | MsaG046419 | 0.843536 | 2.462120e-58 | 1.075586e-55 |
MsaG032434 | MsaG046419 | 0.839563 | 2.712399e-57 | 1.044430e-54 |
MsaG032689 | MsaG046419 | 0.806791 | 1.175380e-49 | 1.858466e-47 |
MsaG034394 | MsaG046419 | 0.853222 | 5.297549e-61 | 3.212315e-58 |
MsaG034677 | MsaG046419 | 0.840409 | 1.636766e-57 | 6.472076e-55 |
MsaG036058 | MsaG046419 | 0.885376 | 1.850106e-71 | 4.316048e-68 |
MsaG038332 | MsaG046419 | 0.811934 | 9.379516e-51 | 1.679398e-48 |
MsaG038393 | MsaG046419 | 0.847851 | 1.682522e-59 | 8.478696e-57 |
MsaG039892 | MsaG046419 | 0.807253 | 9.393781e-50 | 1.501556e-47 |
MsaG039895 | MsaG046419 | 0.844638 | 1.250660e-58 | 5.663236e-56 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG046419 | MtrunA17_Chr4g0075201 | 93.400 | 500 | 26 | 6 | 1 | 495 | 1 | 498 | 0.0 | 843 |
MsaG046419 | MtrunA17_Chr2g0288871 | 54.808 | 520 | 161 | 21 | 1 | 476 | 43 | 532 | 1.62e-139 | 413 |
MsaG046419 | MtrunA17_Chr2g0322391 | 49.614 | 518 | 195 | 16 | 34 | 494 | 81 | 589 | 5.55e-129 | 387 |
MsaG046419 | MtrunA17_Chr3g0099641 | 41.538 | 455 | 207 | 11 | 34 | 473 | 34 | 444 | 6.83e-101 | 311 |
MsaG046419 | MtrunA17_Chr7g0270831 | 39.914 | 466 | 188 | 15 | 41 | 484 | 17 | 412 | 3.14e-81 | 259 |
MsaG046419 | MtrunA17_Chr5g0419241 | 97.196 | 107 | 3 | 0 | 188 | 294 | 1 | 107 | 2.37e-72 | 224 |
MsaG046419 | MtrunA17_Chr4g0025061 | 50.588 | 255 | 107 | 4 | 232 | 481 | 328 | 568 | 1.20e-69 | 233 |
MsaG046419 | MtrunA17_Chr4g0024391 | 55.042 | 238 | 98 | 4 | 242 | 474 | 207 | 440 | 7.40e-69 | 228 |
MsaG046419 | MtrunA17_Chr4g0025051 | 56.846 | 241 | 101 | 3 | 242 | 480 | 313 | 552 | 1.76e-68 | 230 |
MsaG046419 | MtrunA17_Chr2g0302391 | 33.596 | 381 | 215 | 9 | 117 | 489 | 68 | 418 | 1.63e-52 | 183 |
MsaG046419 | MtrunA17_Chr7g0216891 | 31.224 | 474 | 196 | 16 | 109 | 474 | 32 | 483 | 4.11e-48 | 174 |
MsaG046419 | MtrunA17_Chr4g0060271 | 37.209 | 344 | 164 | 8 | 94 | 385 | 46 | 389 | 2.51e-43 | 162 |
MsaG046419 | MtrunA17_Chr4g0051181 | 84.416 | 77 | 12 | 0 | 248 | 324 | 227 | 303 | 4.45e-42 | 156 |
MsaG046419 | MtrunA17_Chr4g0001361 | 33.190 | 232 | 97 | 8 | 239 | 470 | 137 | 310 | 8.72e-29 | 115 |
MsaG046419 | MtrunA17_Chr2g0333851 | 27.778 | 360 | 157 | 13 | 113 | 470 | 51 | 309 | 2.25e-27 | 112 |
MsaG046419 | MtrunA17_Chr1g0150281 | 33.051 | 236 | 128 | 7 | 104 | 338 | 8 | 214 | 7.04e-27 | 109 |
MsaG046419 | MtrunA17_Chr1g0150271 | 32.599 | 227 | 95 | 6 | 116 | 340 | 7 | 177 | 2.64e-26 | 107 |
MsaG046419 | MtrunA17_Chr3g0136961 | 27.419 | 372 | 165 | 9 | 106 | 473 | 15 | 285 | 2.29e-25 | 105 |
MsaG046419 | MtrunA17_Chr3g0079691 | 48.039 | 102 | 52 | 1 | 225 | 326 | 456 | 556 | 1.54e-24 | 107 |
MsaG046419 | MtrunA17_Chr3g0079691 | 41.935 | 93 | 52 | 2 | 233 | 325 | 249 | 339 | 1.12e-14 | 76.6 |
MsaG046419 | MtrunA17_Chr3g0101131 | 43.182 | 132 | 60 | 4 | 247 | 364 | 398 | 528 | 3.74e-24 | 105 |
MsaG046419 | MtrunA17_Chr3g0101131 | 49.180 | 61 | 29 | 2 | 264 | 324 | 243 | 301 | 9.48e-12 | 67.4 |
MsaG046419 | MtrunA17_Chr3g0106491 | 54.430 | 79 | 35 | 1 | 246 | 324 | 347 | 424 | 5.09e-24 | 105 |
MsaG046419 | MtrunA17_Chr3g0106491 | 38.298 | 94 | 52 | 3 | 233 | 326 | 171 | 258 | 4.51e-13 | 71.2 |
MsaG046419 | MtrunA17_Chr5g0445311 | 55.000 | 80 | 35 | 1 | 247 | 326 | 347 | 425 | 5.88e-24 | 105 |
MsaG046419 | MtrunA17_Chr5g0445311 | 50.820 | 61 | 28 | 2 | 264 | 324 | 200 | 258 | 2.54e-12 | 68.9 |
MsaG046419 | MtrunA17_Chr7g0243891 | 42.029 | 138 | 63 | 4 | 241 | 375 | 351 | 474 | 1.07e-23 | 104 |
MsaG046419 | MtrunA17_Chr7g0243891 | 46.575 | 73 | 32 | 3 | 252 | 324 | 209 | 274 | 1.41e-11 | 66.6 |
MsaG046419 | MtrunA17_Chr5g0432161 | 52.381 | 84 | 39 | 1 | 243 | 326 | 400 | 482 | 3.88e-23 | 102 |
MsaG046419 | MtrunA17_Chr5g0432161 | 43.590 | 78 | 42 | 2 | 264 | 341 | 244 | 319 | 3.02e-13 | 72.0 |
MsaG046419 | MtrunA17_Chr4g0004911 | 53.165 | 79 | 36 | 1 | 246 | 324 | 318 | 395 | 4.20e-23 | 102 |
MsaG046419 | MtrunA17_Chr4g0004911 | 41.333 | 75 | 41 | 2 | 250 | 324 | 172 | 243 | 1.44e-13 | 72.8 |
MsaG046419 | MtrunA17_Chr5g0447701 | 44.643 | 112 | 59 | 3 | 231 | 341 | 218 | 327 | 4.26e-23 | 101 |
MsaG046419 | MtrunA17_Chr2g0294231 | 50.000 | 82 | 40 | 1 | 248 | 329 | 187 | 267 | 4.36e-23 | 100 |
MsaG046419 | MtrunA17_Chr1g0150801 | 52.703 | 74 | 34 | 1 | 249 | 322 | 87 | 159 | 5.90e-23 | 95.5 |
MsaG046419 | MtrunA17_Chr7g0218081 | 51.190 | 84 | 40 | 1 | 243 | 326 | 389 | 471 | 6.32e-23 | 102 |
MsaG046419 | MtrunA17_Chr7g0218081 | 52.459 | 61 | 27 | 2 | 264 | 324 | 228 | 286 | 7.21e-13 | 70.9 |
MsaG046419 | MtrunA17_Chr7g0270191 | 46.316 | 95 | 46 | 2 | 248 | 342 | 129 | 218 | 8.31e-23 | 98.6 |
MsaG046419 | MtrunA17_Chr7g0224801 | 52.113 | 71 | 33 | 1 | 253 | 323 | 82 | 151 | 2.30e-22 | 94.0 |
MsaG046419 | MtrunA17_Chr5g0418191 | 50.617 | 81 | 39 | 1 | 246 | 326 | 302 | 381 | 5.68e-22 | 98.2 |
MsaG046419 | MtrunA17_Chr5g0418191 | 37.615 | 109 | 64 | 3 | 264 | 372 | 151 | 255 | 7.82e-13 | 70.5 |
MsaG046419 | MtrunA17_Chr7g0249311 | 51.250 | 80 | 38 | 1 | 247 | 326 | 375 | 453 | 9.86e-22 | 99.0 |
MsaG046419 | MtrunA17_Chr7g0249311 | 48.333 | 60 | 29 | 2 | 265 | 324 | 180 | 237 | 4.78e-11 | 65.5 |
MsaG046419 | MtrunA17_Chr7g0249301 | 51.250 | 80 | 38 | 1 | 247 | 326 | 275 | 353 | 1.50e-21 | 96.3 |
MsaG046419 | MtrunA17_Chr7g0249301 | 46.154 | 65 | 33 | 2 | 260 | 324 | 58 | 120 | 4.21e-11 | 64.7 |
MsaG046419 | MtrunA17_Chr4g0042831 | 46.316 | 95 | 44 | 2 | 232 | 326 | 252 | 339 | 2.06e-21 | 96.3 |
MsaG046419 | MtrunA17_Chr1g0194481 | 51.948 | 77 | 36 | 1 | 248 | 324 | 142 | 217 | 2.68e-21 | 94.7 |
MsaG046419 | MtrunA17_Chr8g0386241 | 45.570 | 79 | 42 | 1 | 249 | 327 | 88 | 165 | 6.30e-21 | 90.1 |
MsaG046419 | MtrunA17_Chr4g0051881 | 44.554 | 101 | 49 | 2 | 251 | 345 | 165 | 264 | 1.19e-20 | 93.2 |
MsaG046419 | MtrunA17_Chr4g0068541 | 50.649 | 77 | 37 | 1 | 248 | 324 | 192 | 267 | 2.43e-20 | 93.2 |
MsaG046419 | MtrunA17_Chr7g0263531 | 41.489 | 94 | 54 | 1 | 231 | 324 | 328 | 420 | 4.85e-20 | 92.4 |
MsaG046419 | MtrunA17_Chr7g0263531 | 50.000 | 60 | 28 | 2 | 265 | 324 | 190 | 247 | 9.91e-12 | 67.0 |
MsaG046419 | MtrunA17_Chr5g0418781 | 47.561 | 82 | 42 | 1 | 240 | 321 | 100 | 180 | 5.42e-20 | 90.1 |
MsaG046419 | MtrunA17_Chr8g0383251 | 45.946 | 74 | 39 | 1 | 251 | 324 | 95 | 167 | 1.18e-19 | 86.7 |
MsaG046419 | MtrunA17_Chr7g0270051 | 52.703 | 74 | 32 | 1 | 264 | 337 | 53 | 123 | 2.71e-19 | 87.8 |
MsaG046419 | MtrunA17_Chr4g0074001 | 50.633 | 79 | 36 | 2 | 248 | 324 | 343 | 420 | 2.86e-19 | 90.9 |
MsaG046419 | MtrunA17_Chr5g0443131 | 50.000 | 74 | 36 | 1 | 251 | 324 | 144 | 216 | 1.15e-18 | 86.7 |
MsaG046419 | MtrunA17_Chr7g0248721 | 47.500 | 80 | 40 | 2 | 243 | 322 | 120 | 197 | 1.59e-18 | 84.3 |
MsaG046419 | MtrunA17_Chr3g0129361 | 48.000 | 75 | 38 | 1 | 247 | 321 | 127 | 200 | 1.61e-18 | 84.3 |
MsaG046419 | MtrunA17_Chr1g0147881 | 48.649 | 74 | 38 | 0 | 248 | 321 | 246 | 319 | 1.93e-18 | 86.7 |
MsaG046419 | MtrunA17_Chr8g0335811 | 43.902 | 82 | 45 | 1 | 240 | 321 | 130 | 210 | 2.61e-18 | 84.0 |
MsaG046419 | MtrunA17_Chr3g0129321 | 47.297 | 74 | 38 | 1 | 251 | 324 | 105 | 177 | 3.96e-18 | 82.8 |
MsaG046419 | MtrunA17_Chr5g0401821 | 48.684 | 76 | 39 | 0 | 248 | 323 | 183 | 258 | 6.19e-18 | 84.0 |
MsaG046419 | MtrunA17_Chr4g0053281 | 48.101 | 79 | 41 | 0 | 248 | 326 | 250 | 328 | 7.19e-18 | 84.7 |
MsaG046419 | MtrunA17_Chr8g0379461 | 52.113 | 71 | 29 | 1 | 264 | 334 | 76 | 141 | 1.49e-17 | 82.0 |
MsaG046419 | MtrunA17_Chr2g0319961 | 39.623 | 106 | 50 | 2 | 233 | 324 | 35 | 140 | 2.33e-17 | 82.0 |
MsaG046419 | MtrunA17_Chr8g0348311 | 52.113 | 71 | 34 | 0 | 264 | 334 | 155 | 225 | 2.76e-17 | 83.2 |
MsaG046419 | MtrunA17_Chr8g0383351 | 47.368 | 76 | 38 | 2 | 247 | 321 | 142 | 216 | 3.93e-17 | 80.9 |
MsaG046419 | MtrunA17_Chr7g0228941 | 47.887 | 71 | 37 | 0 | 251 | 321 | 39 | 109 | 4.54e-17 | 77.4 |
MsaG046419 | MtrunA17_Chr1g0188941 | 41.667 | 84 | 48 | 1 | 241 | 324 | 28 | 110 | 4.91e-17 | 77.0 |
MsaG046419 | MtrunA17_Chr1g0184691 | 52.459 | 61 | 29 | 0 | 265 | 325 | 294 | 354 | 6.60e-17 | 82.4 |
MsaG046419 | MtrunA17_Chr2g0284321 | 51.613 | 62 | 30 | 0 | 264 | 325 | 35 | 96 | 8.56e-17 | 79.3 |
MsaG046419 | MtrunA17_Chr4g0071521 | 47.297 | 74 | 39 | 0 | 248 | 321 | 229 | 302 | 9.03e-17 | 81.3 |
MsaG046419 | MtrunA17_Chr2g0293481 | 48.571 | 70 | 36 | 0 | 265 | 334 | 268 | 337 | 1.33e-16 | 82.4 |
MsaG046419 | MtrunA17_Chr3g0139021 | 45.946 | 74 | 40 | 0 | 248 | 321 | 298 | 371 | 5.56e-16 | 79.7 |
MsaG046419 | MtrunA17_Chr2g0289181 | 34.074 | 135 | 79 | 3 | 259 | 383 | 9 | 143 | 6.63e-16 | 77.0 |
MsaG046419 | MtrunA17_Chr7g0248691 | 37.607 | 117 | 71 | 2 | 220 | 334 | 108 | 224 | 7.75e-16 | 78.6 |
MsaG046419 | MtrunA17_Chr6g0485431 | 48.000 | 75 | 37 | 2 | 251 | 324 | 141 | 214 | 1.10e-14 | 75.5 |
MsaG046419 | MtrunA17_Chr8g0387501 | 44.286 | 70 | 39 | 0 | 265 | 334 | 130 | 199 | 1.27e-14 | 74.3 |
MsaG046419 | MtrunA17_Chr7g0238921 | 52.308 | 65 | 30 | 1 | 264 | 328 | 124 | 187 | 1.39e-14 | 74.7 |
MsaG046419 | MtrunA17_Chr1g0189391 | 43.056 | 72 | 39 | 2 | 251 | 321 | 84 | 154 | 9.38e-14 | 72.4 |
MsaG046419 | MtrunA17_Chr1g0202461 | 43.421 | 76 | 43 | 0 | 265 | 340 | 262 | 337 | 1.70e-13 | 72.0 |
MsaG046419 | MtrunA17_Chr3g0126391 | 53.333 | 60 | 26 | 1 | 263 | 320 | 132 | 191 | 5.51e-13 | 70.1 |
MsaG046419 | MtrunA17_Chr5g0432071 | 38.462 | 78 | 46 | 2 | 264 | 341 | 104 | 179 | 1.29e-12 | 67.0 |
MsaG046419 | MtrunA17_Chr8g0347251 | 47.826 | 69 | 34 | 1 | 263 | 329 | 135 | 203 | 1.78e-12 | 68.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG046419 | AT1G62300.1 | 50.688 | 509 | 186 | 17 | 10 | 473 | 50 | 538 | 4.44e-125 | 376 |
MsaG046419 | AT4G04450.1 | 47.773 | 494 | 189 | 15 | 34 | 473 | 25 | 503 | 6.05e-124 | 372 |
MsaG046419 | AT4G22070.4 | 47.776 | 517 | 172 | 14 | 33 | 476 | 26 | 517 | 1.12e-112 | 343 |
MsaG046419 | AT4G22070.3 | 47.776 | 517 | 172 | 14 | 33 | 476 | 26 | 517 | 1.12e-112 | 343 |
MsaG046419 | AT4G22070.2 | 47.776 | 517 | 172 | 14 | 33 | 476 | 26 | 517 | 1.12e-112 | 343 |
MsaG046419 | AT4G22070.1 | 47.776 | 517 | 172 | 14 | 33 | 476 | 26 | 517 | 1.12e-112 | 343 |
MsaG046419 | AT4G04450.2 | 49.761 | 418 | 158 | 13 | 99 | 473 | 1 | 409 | 6.31e-110 | 333 |
MsaG046419 | AT4G01720.1 | 45.312 | 384 | 169 | 15 | 103 | 470 | 85 | 443 | 2.17e-66 | 222 |
MsaG046419 | AT5G15130.2 | 44.118 | 272 | 115 | 5 | 236 | 475 | 157 | 423 | 8.91e-50 | 178 |
MsaG046419 | AT5G15130.1 | 44.118 | 272 | 115 | 5 | 236 | 475 | 199 | 465 | 1.17e-49 | 179 |
MsaG046419 | AT1G68150.1 | 42.194 | 237 | 110 | 6 | 120 | 345 | 96 | 316 | 6.01e-47 | 167 |
MsaG046419 | AT1G18860.1 | 42.069 | 290 | 107 | 8 | 247 | 475 | 222 | 511 | 6.36e-44 | 162 |
MsaG046419 | AT1G69810.1 | 36.364 | 308 | 155 | 10 | 114 | 387 | 22 | 322 | 4.72e-38 | 143 |
MsaG046419 | AT1G69810.2 | 54.930 | 142 | 58 | 3 | 247 | 387 | 128 | 264 | 2.31e-36 | 137 |
MsaG046419 | AT4G31800.1 | 35.270 | 241 | 125 | 5 | 111 | 342 | 36 | 254 | 2.97e-33 | 128 |
MsaG046419 | AT1G80840.1 | 34.034 | 238 | 108 | 7 | 98 | 324 | 7 | 206 | 3.77e-31 | 122 |
MsaG046419 | AT2G25000.1 | 32.870 | 216 | 103 | 4 | 113 | 328 | 37 | 210 | 1.11e-26 | 109 |
MsaG046419 | AT2G25000.2 | 33.173 | 208 | 97 | 4 | 121 | 328 | 2 | 167 | 2.34e-26 | 107 |
MsaG046419 | AT2G25000.4 | 33.173 | 208 | 97 | 4 | 121 | 328 | 2 | 167 | 2.34e-26 | 107 |
MsaG046419 | AT2G25000.3 | 33.173 | 208 | 97 | 4 | 121 | 328 | 24 | 189 | 3.36e-26 | 107 |
MsaG046419 | AT4G31800.2 | 55.000 | 80 | 36 | 0 | 263 | 342 | 110 | 189 | 3.56e-25 | 104 |
MsaG046419 | AT2G38470.1 | 53.086 | 81 | 37 | 1 | 246 | 326 | 344 | 423 | 2.74e-24 | 106 |
MsaG046419 | AT2G38470.1 | 46.575 | 73 | 36 | 3 | 252 | 324 | 173 | 242 | 8.09e-13 | 70.9 |
MsaG046419 | AT4G26640.5 | 55.128 | 78 | 34 | 1 | 247 | 324 | 188 | 264 | 7.04e-24 | 103 |
MsaG046419 | AT4G26640.5 | 38.095 | 84 | 50 | 2 | 241 | 324 | 12 | 93 | 4.51e-12 | 68.2 |
MsaG046419 | AT4G26640.6 | 55.128 | 78 | 34 | 1 | 247 | 324 | 188 | 264 | 7.04e-24 | 103 |
MsaG046419 | AT4G26640.6 | 38.095 | 84 | 50 | 2 | 241 | 324 | 12 | 93 | 4.51e-12 | 68.2 |
MsaG046419 | AT4G26640.4 | 55.128 | 78 | 34 | 1 | 247 | 324 | 188 | 264 | 7.04e-24 | 103 |
MsaG046419 | AT4G26640.4 | 38.095 | 84 | 50 | 2 | 241 | 324 | 12 | 93 | 4.51e-12 | 68.2 |
MsaG046419 | AT4G26640.3 | 55.128 | 78 | 34 | 1 | 247 | 324 | 188 | 264 | 7.04e-24 | 103 |
MsaG046419 | AT4G26640.3 | 38.095 | 84 | 50 | 2 | 241 | 324 | 12 | 93 | 4.51e-12 | 68.2 |
MsaG046419 | AT4G26640.7 | 55.128 | 78 | 34 | 1 | 247 | 324 | 324 | 400 | 1.54e-23 | 103 |
MsaG046419 | AT4G26640.7 | 38.095 | 84 | 50 | 2 | 241 | 324 | 148 | 229 | 6.06e-12 | 68.2 |
MsaG046419 | AT4G26640.1 | 55.128 | 78 | 34 | 1 | 247 | 324 | 292 | 368 | 1.67e-23 | 103 |
MsaG046419 | AT4G26640.1 | 38.095 | 84 | 50 | 2 | 241 | 324 | 116 | 197 | 6.29e-12 | 68.2 |
MsaG046419 | AT4G26640.2 | 55.128 | 78 | 34 | 1 | 247 | 324 | 364 | 440 | 2.01e-23 | 103 |
MsaG046419 | AT4G26640.2 | 38.095 | 84 | 50 | 2 | 241 | 324 | 188 | 269 | 6.16e-12 | 68.6 |
MsaG046419 | AT5G56270.1 | 50.000 | 90 | 44 | 1 | 237 | 326 | 460 | 548 | 2.90e-23 | 103 |
MsaG046419 | AT5G56270.1 | 49.180 | 61 | 29 | 2 | 265 | 325 | 274 | 332 | 1.90e-11 | 67.0 |
MsaG046419 | AT5G26170.1 | 52.778 | 72 | 33 | 1 | 250 | 321 | 99 | 169 | 3.85e-23 | 96.7 |
MsaG046419 | AT2G04880.2 | 47.674 | 86 | 44 | 1 | 243 | 328 | 262 | 346 | 4.88e-23 | 102 |
MsaG046419 | AT2G04880.2 | 31.081 | 148 | 82 | 5 | 262 | 398 | 109 | 247 | 6.17e-13 | 71.2 |
MsaG046419 | AT2G04880.1 | 47.674 | 86 | 44 | 1 | 243 | 328 | 286 | 370 | 6.25e-23 | 102 |
MsaG046419 | AT2G04880.1 | 47.143 | 70 | 34 | 3 | 262 | 330 | 109 | 176 | 1.46e-12 | 70.1 |
MsaG046419 | AT1G29860.1 | 46.392 | 97 | 48 | 2 | 248 | 344 | 120 | 212 | 6.25e-23 | 99.0 |
MsaG046419 | AT5G49520.1 | 51.948 | 77 | 36 | 1 | 248 | 324 | 205 | 280 | 7.82e-23 | 100 |
MsaG046419 | AT5G07100.2 | 48.276 | 87 | 44 | 1 | 238 | 324 | 115 | 200 | 8.94e-23 | 97.1 |
MsaG046419 | AT5G07100.2 | 39.189 | 74 | 44 | 1 | 264 | 337 | 24 | 96 | 4.03e-11 | 63.2 |
MsaG046419 | AT5G07100.4 | 48.276 | 87 | 44 | 1 | 238 | 324 | 115 | 200 | 8.94e-23 | 97.1 |
MsaG046419 | AT5G07100.4 | 39.189 | 74 | 44 | 1 | 264 | 337 | 24 | 96 | 4.03e-11 | 63.2 |
MsaG046419 | AT5G07100.5 | 48.276 | 87 | 44 | 1 | 238 | 324 | 115 | 200 | 8.94e-23 | 97.1 |
MsaG046419 | AT5G07100.5 | 39.189 | 74 | 44 | 1 | 264 | 337 | 24 | 96 | 4.03e-11 | 63.2 |
MsaG046419 | AT5G07100.3 | 48.276 | 87 | 44 | 1 | 238 | 324 | 115 | 200 | 8.94e-23 | 97.1 |
MsaG046419 | AT5G07100.3 | 39.189 | 74 | 44 | 1 | 264 | 337 | 24 | 96 | 4.03e-11 | 63.2 |
MsaG046419 | AT1G13960.2 | 43.697 | 119 | 53 | 4 | 207 | 324 | 210 | 315 | 1.19e-22 | 99.8 |
MsaG046419 | AT1G13960.2 | 49.180 | 61 | 29 | 2 | 264 | 324 | 76 | 134 | 6.23e-12 | 67.4 |
MsaG046419 | AT1G13960.1 | 51.190 | 84 | 40 | 1 | 241 | 324 | 386 | 468 | 1.28e-22 | 101 |
MsaG046419 | AT1G13960.1 | 49.180 | 61 | 29 | 2 | 264 | 324 | 229 | 287 | 5.42e-12 | 68.6 |
MsaG046419 | AT5G07100.1 | 48.276 | 87 | 44 | 1 | 238 | 324 | 208 | 293 | 1.37e-22 | 98.6 |
MsaG046419 | AT5G07100.1 | 39.189 | 74 | 44 | 1 | 264 | 337 | 117 | 189 | 9.03e-11 | 63.5 |
MsaG046419 | AT2G03340.1 | 48.837 | 86 | 43 | 1 | 241 | 326 | 392 | 476 | 1.25e-21 | 98.2 |
MsaG046419 | AT2G03340.1 | 49.180 | 61 | 29 | 2 | 264 | 324 | 250 | 308 | 2.58e-12 | 69.3 |
MsaG046419 | AT5G13080.1 | 53.425 | 73 | 33 | 1 | 251 | 323 | 54 | 125 | 1.67e-21 | 91.3 |
MsaG046419 | AT4G18170.1 | 51.948 | 77 | 36 | 1 | 248 | 324 | 156 | 231 | 1.70e-21 | 95.5 |
MsaG046419 | AT2G47260.1 | 45.161 | 93 | 50 | 1 | 240 | 332 | 150 | 241 | 2.05e-21 | 95.9 |
MsaG046419 | AT1G64000.1 | 45.882 | 85 | 45 | 1 | 238 | 322 | 88 | 171 | 2.45e-21 | 92.0 |
MsaG046419 | AT5G41570.1 | 51.250 | 80 | 37 | 2 | 244 | 322 | 77 | 155 | 5.95e-21 | 90.5 |
MsaG046419 | AT2G46130.1 | 47.126 | 87 | 45 | 1 | 236 | 322 | 2 | 87 | 7.59e-21 | 88.2 |
MsaG046419 | AT4G31800.3 | 32.500 | 200 | 104 | 5 | 111 | 301 | 36 | 213 | 1.04e-20 | 91.7 |
MsaG046419 | AT1G55600.1 | 43.333 | 90 | 50 | 1 | 237 | 326 | 280 | 368 | 1.98e-20 | 94.4 |
MsaG046419 | AT4G26440.1 | 41.071 | 112 | 63 | 2 | 237 | 348 | 345 | 453 | 2.00e-20 | 94.7 |
MsaG046419 | AT3G01080.1 | 46.429 | 84 | 44 | 1 | 241 | 324 | 283 | 365 | 2.44e-20 | 93.6 |
MsaG046419 | AT3G01080.1 | 49.180 | 61 | 29 | 2 | 264 | 324 | 167 | 225 | 7.75e-11 | 64.3 |
MsaG046419 | AT3G01080.2 | 49.367 | 79 | 39 | 1 | 246 | 324 | 326 | 403 | 2.69e-20 | 94.0 |
MsaG046419 | AT3G01080.2 | 49.180 | 61 | 29 | 2 | 264 | 324 | 205 | 263 | 8.24e-11 | 64.7 |
MsaG046419 | AT3G62340.1 | 53.165 | 79 | 36 | 1 | 251 | 329 | 105 | 182 | 2.78e-20 | 91.3 |
MsaG046419 | AT4G30935.1 | 41.176 | 119 | 58 | 3 | 231 | 341 | 298 | 412 | 3.70e-20 | 93.6 |
MsaG046419 | AT1G69310.4 | 45.783 | 83 | 44 | 1 | 239 | 321 | 122 | 203 | 3.94e-20 | 90.9 |
MsaG046419 | AT1G69310.2 | 45.783 | 83 | 44 | 1 | 239 | 321 | 122 | 203 | 3.94e-20 | 90.9 |
MsaG046419 | AT1G69310.1 | 45.783 | 83 | 44 | 1 | 239 | 321 | 122 | 203 | 3.94e-20 | 90.9 |
MsaG046419 | AT2G30250.1 | 50.000 | 80 | 39 | 1 | 247 | 326 | 311 | 389 | 4.26e-20 | 92.8 |
MsaG046419 | AT5G46350.1 | 50.000 | 74 | 36 | 1 | 251 | 324 | 170 | 242 | 4.54e-20 | 91.7 |
MsaG046419 | AT3G01970.1 | 51.389 | 72 | 34 | 1 | 250 | 321 | 51 | 121 | 1.46e-19 | 85.9 |
MsaG046419 | AT2G23320.1 | 59.322 | 59 | 24 | 0 | 265 | 323 | 241 | 299 | 1.06e-18 | 87.4 |
MsaG046419 | AT5G64810.1 | 47.887 | 71 | 36 | 1 | 251 | 321 | 97 | 166 | 1.10e-18 | 84.7 |
MsaG046419 | AT2G30590.1 | 50.000 | 82 | 40 | 1 | 248 | 328 | 297 | 378 | 1.12e-18 | 88.2 |
MsaG046419 | AT3G58710.1 | 42.056 | 107 | 47 | 2 | 233 | 324 | 25 | 131 | 1.24e-18 | 86.3 |
MsaG046419 | AT3G58710.2 | 42.453 | 106 | 47 | 2 | 233 | 324 | 25 | 130 | 2.02e-18 | 85.9 |
MsaG046419 | AT5G28650.1 | 62.264 | 53 | 20 | 0 | 269 | 321 | 267 | 319 | 3.85e-18 | 85.9 |
MsaG046419 | AT2G44745.1 | 46.667 | 75 | 39 | 1 | 247 | 321 | 128 | 201 | 3.98e-18 | 83.6 |
MsaG046419 | AT1G29280.1 | 52.459 | 61 | 29 | 0 | 264 | 324 | 74 | 134 | 7.65e-18 | 84.0 |
MsaG046419 | AT4G39410.1 | 48.000 | 75 | 38 | 1 | 247 | 321 | 206 | 279 | 9.60e-18 | 84.3 |
MsaG046419 | AT3G04670.1 | 57.895 | 57 | 24 | 0 | 265 | 321 | 263 | 319 | 2.24e-17 | 83.6 |
MsaG046419 | AT4G24240.1 | 48.684 | 76 | 39 | 0 | 248 | 323 | 265 | 340 | 3.30e-17 | 83.6 |
MsaG046419 | AT4G31550.1 | 48.649 | 74 | 38 | 0 | 248 | 321 | 230 | 303 | 3.55e-17 | 83.2 |
MsaG046419 | AT4G31550.2 | 48.649 | 74 | 38 | 0 | 248 | 321 | 229 | 302 | 3.58e-17 | 82.8 |
MsaG046419 | AT2G24570.1 | 48.649 | 74 | 38 | 0 | 248 | 321 | 227 | 300 | 5.15e-17 | 82.4 |
MsaG046419 | AT4G01250.1 | 40.426 | 94 | 51 | 1 | 246 | 334 | 105 | 198 | 1.47e-16 | 80.9 |
MsaG046419 | AT5G52830.1 | 46.753 | 77 | 41 | 0 | 258 | 334 | 159 | 235 | 1.85e-16 | 81.3 |
MsaG046419 | AT2G37260.3 | 45.977 | 87 | 41 | 3 | 259 | 340 | 264 | 349 | 1.85e-16 | 81.3 |
MsaG046419 | AT2G37260.3 | 43.243 | 74 | 40 | 2 | 265 | 338 | 86 | 157 | 7.30e-14 | 73.2 |
MsaG046419 | AT2G37260.2 | 45.977 | 87 | 41 | 3 | 259 | 340 | 262 | 347 | 1.99e-16 | 81.3 |
MsaG046419 | AT2G37260.2 | 43.243 | 74 | 40 | 2 | 265 | 338 | 84 | 155 | 7.59e-14 | 73.2 |
MsaG046419 | AT2G34830.1 | 46.053 | 76 | 40 | 1 | 250 | 324 | 200 | 275 | 2.02e-16 | 81.6 |
MsaG046419 | AT1G30650.1 | 46.053 | 76 | 40 | 1 | 250 | 324 | 202 | 277 | 2.46e-16 | 81.6 |
MsaG046419 | AT2G34830.2 | 46.053 | 76 | 40 | 1 | 250 | 324 | 209 | 284 | 2.51e-16 | 81.6 |
MsaG046419 | AT2G37260.1 | 45.977 | 87 | 41 | 3 | 259 | 340 | 344 | 429 | 3.98e-16 | 80.9 |
MsaG046419 | AT2G37260.1 | 43.243 | 74 | 40 | 2 | 265 | 338 | 166 | 237 | 1.22e-13 | 73.2 |
MsaG046419 | AT2G46130.2 | 43.678 | 87 | 44 | 2 | 236 | 322 | 2 | 83 | 7.39e-16 | 73.9 |
MsaG046419 | AT4G23550.1 | 41.975 | 81 | 47 | 0 | 259 | 339 | 135 | 215 | 1.31e-15 | 78.2 |
MsaG046419 | AT1G69310.3 | 42.169 | 83 | 43 | 2 | 239 | 321 | 122 | 199 | 3.53e-15 | 76.3 |
MsaG046419 | AT5G43290.1 | 35.455 | 110 | 52 | 3 | 221 | 329 | 87 | 178 | 1.17e-14 | 74.7 |
MsaG046419 | AT5G45050.2 | 40.449 | 89 | 41 | 1 | 264 | 340 | 1152 | 1240 | 2.10e-13 | 73.6 |
MsaG046419 | AT5G45050.1 | 40.449 | 89 | 41 | 1 | 264 | 340 | 1180 | 1268 | 2.28e-13 | 73.6 |
MsaG046419 | AT5G45050.4 | 40.449 | 89 | 41 | 1 | 264 | 340 | 1041 | 1129 | 2.46e-13 | 73.2 |
MsaG046419 | AT2G21900.1 | 43.548 | 62 | 34 | 1 | 263 | 324 | 108 | 168 | 2.89e-13 | 69.3 |
MsaG046419 | AT2G46400.1 | 42.500 | 80 | 44 | 1 | 243 | 320 | 83 | 162 | 3.36e-12 | 67.8 |
MsaG046419 | AT5G24110.1 | 50.000 | 60 | 28 | 1 | 263 | 320 | 112 | 171 | 5.28e-12 | 67.0 |
MsaG046419 | AT5G45260.1 | 37.255 | 102 | 57 | 3 | 240 | 339 | 1189 | 1285 | 7.58e-12 | 68.6 |
MsaG046419 | AT2G40740.1 | 35.849 | 106 | 51 | 3 | 264 | 352 | 173 | 278 | 3.02e-11 | 64.7 |
MsaG046419 | AT2G40740.3 | 35.849 | 106 | 51 | 3 | 264 | 352 | 182 | 287 | 3.49e-11 | 64.7 |
MsaG046419 | AT3G01080.3 | 49.180 | 61 | 29 | 2 | 264 | 324 | 205 | 263 | 4.61e-11 | 64.7 |
Find 125 sgRNAs with CRISPR-Local
Find sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CATTTGAAGGCCGGAGAATT+TGG | 0.150973 | 8:+84304416 | None:intergenic |
AAGAATTCTGGCTAGTAAAT+TGG | 0.190593 | 8:+84304626 | None:intergenic |
TCAGCATTTCCTTCAGCTTT+TGG | 0.196513 | 8:+84305641 | None:intergenic |
GCTGCTACTGTGTTACTATC+TGG | 0.288928 | 8:-84304681 | MsaT046419.1:CDS |
GGGATTACTGTTATTGTTGC+TGG | 0.289882 | 8:+84304257 | None:intergenic |
GGCATTGGAGGGGTTTAATC+TGG | 0.291166 | 8:+84305245 | None:intergenic |
GGGAGGAGCAGCACCAATTA+TGG | 0.310343 | 8:+84304278 | None:intergenic |
GAGGCTGTCCAAGCTGGAAT+TGG | 0.315291 | 8:+84304496 | None:intergenic |
CACTTCCGGTGTTAGTAATA+AGG | 0.320090 | 8:+84305975 | None:intergenic |
AGAATTCTGGCTAGTAAATT+GGG | 0.323046 | 8:+84304627 | None:intergenic |
TTCTGAGGTGTGCATGGTTC+AGG | 0.327374 | 8:+84305333 | None:intergenic |
ATCAGAACTAGTACAACTTT+TGG | 0.338708 | 8:-84305283 | MsaT046419.1:CDS |
CACCATTGATTGATCACTTC+CGG | 0.338711 | 8:+84305961 | None:intergenic |
GGATGCCAATGGCGAAAATA+TGG | 0.339559 | 8:-84305036 | MsaT046419.1:CDS |
GGTAGCACTGTTGATGATAT+TGG | 0.345701 | 8:+84304236 | None:intergenic |
GAAACATCATCAAGTTGTTC+TGG | 0.348285 | 8:+84306436 | None:intergenic |
CCTGATCATGTTCTGTGGTT+TGG | 0.349953 | 8:+84305551 | None:intergenic |
GCTGCTATCTCCTCCATAAT+TGG | 0.361075 | 8:-84304291 | MsaT046419.1:CDS |
TGCTTGATCAGCGGCATTGG+AGG | 0.372243 | 8:+84305233 | None:intergenic |
GTAGCACTGTTGATGATATT+GGG | 0.374246 | 8:+84304237 | None:intergenic |
GCGAGTGCTGCCGTGAAGTT+TGG | 0.385939 | 8:+84304315 | None:intergenic |
CGGCATGAATCGTGTAACTA+TGG | 0.386196 | 8:-84306500 | MsaT046419.1:CDS |
CTTGGACAGCCTCAAAACTT+TGG | 0.392430 | 8:-84304486 | MsaT046419.1:CDS |
GTTCTGTTGCTGTTGCATTA+AGG | 0.395721 | 8:+84305573 | None:intergenic |
AGAGCAATTAGGAAGAATTC+TGG | 0.399082 | 8:+84304614 | None:intergenic |
TTACAGATGCACAATGGCTC+TGG | 0.402318 | 8:-84304974 | MsaT046419.1:CDS |
AGACTCACTTGTTTGCGAAC+GGG | 0.403359 | 8:+84304946 | None:intergenic |
AGTTCTGATGCGTCTGGATC+AGG | 0.404046 | 8:+84305297 | None:intergenic |
TGATCATCCACTTCTGCTGC+TGG | 0.410282 | 8:+84305363 | None:intergenic |
CCTGTTGAGTTGGATGCAAC+TGG | 0.412568 | 8:+84304370 | None:intergenic |
TACCATGTGGGCTTCTGATC+GGG | 0.414425 | 8:+84305167 | None:intergenic |
CAACATCTTGAGACATTTGA+AGG | 0.433132 | 8:+84304403 | None:intergenic |
CTGTAATATGCGCGAGGACA+AGG | 0.435386 | 8:+84304991 | None:intergenic |
TATCTGTAGTGTCGCGTGTA+AGG | 0.437510 | 8:+84304538 | None:intergenic |
CCAGTTGCATCCAACTCAAC+AGG | 0.445863 | 8:-84304370 | MsaT046419.1:CDS |
AGGCTGTCCAAGCTGGAATT+GGG | 0.454087 | 8:+84304497 | None:intergenic |
TCCTAATTGCTCTTCTAGCA+TGG | 0.455237 | 8:-84304604 | MsaT046419.1:CDS |
TATAACCAATCCAAATTCTC+CGG | 0.471393 | 8:-84304426 | MsaT046419.1:CDS |
GTGTGCATGGTTCAGGCTCT+TGG | 0.473309 | 8:+84305340 | None:intergenic |
GAAATTGACCTGTTCAGTCT+TGG | 0.478191 | 8:+84305901 | None:intergenic |
GCTGCGGTGGTCGATGCCAT+TGG | 0.480782 | 8:+84304705 | None:intergenic |
CTGCTACTGTGTTACTATCT+GGG | 0.480934 | 8:-84304680 | MsaT046419.1:CDS |
GCTTGATCAGCGGCATTGGA+GGG | 0.485891 | 8:+84305234 | None:intergenic |
GAAGTTTGGATCCGCGGTGA+TGG | 0.486096 | 8:+84304329 | None:intergenic |
CAGCCTCAAAACTTTGGATC+AGG | 0.489452 | 8:-84304480 | MsaT046419.1:CDS |
GGATTACTGTTATTGTTGCT+GGG | 0.489961 | 8:+84304258 | None:intergenic |
TCTAGTGTCACAGTAGGAAA+TGG | 0.493043 | 8:+84304561 | None:intergenic |
TGTACTAGTTCTGATGCGTC+TGG | 0.496058 | 8:+84305291 | None:intergenic |
TAAGCGTGCCAAGACTGAAC+AGG | 0.497408 | 8:-84305909 | MsaT046419.1:intron |
ATTTGCTTGATCAGCGGCAT+TGG | 0.498345 | 8:+84305230 | None:intergenic |
GGCTCTTTCTGATTGTTCTG+AGG | 0.499101 | 8:+84305318 | None:intergenic |
GGCATAGCAGCAGGTGGGAG+TGG | 0.499597 | 8:+84304726 | None:intergenic |
ATCTTGAGACATTTGAAGGC+CGG | 0.503538 | 8:+84304407 | None:intergenic |
TAGCAGCAGGTGGGAGTGGA+TGG | 0.505934 | 8:+84304730 | None:intergenic |
GACTCACTTGTTTGCGAACG+GGG | 0.507020 | 8:+84304947 | None:intergenic |
TCTCCTTCCCAATTCCAGCT+TGG | 0.508244 | 8:-84304504 | MsaT046419.1:CDS |
TTTACATTTCAGATTGTCAA+AGG | 0.510724 | 8:-84305438 | MsaT046419.1:intron |
CTTGATCAGCGGCATTGGAG+GGG | 0.514641 | 8:+84305235 | None:intergenic |
CCAAACCACAGAACATGATC+AGG | 0.515476 | 8:-84305551 | MsaT046419.1:intron |
ATACCATGTGGGCTTCTGAT+CGG | 0.516534 | 8:+84305166 | None:intergenic |
ATGAATCTAATAAGCACAAA+CGG | 0.517014 | 8:-84306571 | MsaT046419.1:CDS |
GGTCAATGTCAAGTGCTGAT+GGG | 0.517767 | 8:-84304659 | MsaT046419.1:CDS |
GGGTCAATGTCAAGTGCTGA+TGG | 0.517914 | 8:-84304660 | MsaT046419.1:CDS |
TGATTGTTCTGAGGTGTGCA+TGG | 0.520062 | 8:+84305327 | None:intergenic |
GCCATGCTAGAAGAGCAATT+AGG | 0.522733 | 8:+84304603 | None:intergenic |
AAAGGAAAAGCTGAGGAGAA+AGG | 0.526527 | 8:-84305420 | MsaT046419.1:CDS |
GAGCAATTGCAAGAGGAGCT+TGG | 0.529769 | 8:-84305682 | MsaT046419.1:CDS |
AAAGCTGAGGAGAAAGGAGA+TGG | 0.531880 | 8:-84305414 | MsaT046419.1:CDS |
GCATTGGAGGGGTTTAATCT+GGG | 0.534841 | 8:+84305246 | None:intergenic |
GATGCCATTGGCATAGCAGC+AGG | 0.540165 | 8:+84304717 | None:intergenic |
GTTTGGATCCGCGGTGATGG+CGG | 0.540992 | 8:+84304332 | None:intergenic |
GATCAATCAATGGTGGATGA+TGG | 0.542601 | 8:-84305953 | MsaT046419.1:CDS |
TTAATCTGGGAAGCTGACTT+CGG | 0.543926 | 8:+84305259 | None:intergenic |
TCACAATTGCAGATCAATGA+TGG | 0.544968 | 8:-84305057 | MsaT046419.1:intron |
TGTGGGCTTCTGATCGGGCA+CGG | 0.545553 | 8:+84305172 | None:intergenic |
TACAGATGCACAATGGCTCT+GGG | 0.545795 | 8:-84304973 | MsaT046419.1:CDS |
AGTGATGATGCCTGTTGAGT+TGG | 0.552709 | 8:+84304360 | None:intergenic |
CACCGGAAGTGATCAATCAA+TGG | 0.556816 | 8:-84305963 | MsaT046419.1:CDS |
CTTCAAATGTCTCAAGATGT+TGG | 0.558376 | 8:-84304402 | MsaT046419.1:CDS |
CAGACTCACTTGTTTGCGAA+CGG | 0.559552 | 8:+84304945 | None:intergenic |
CACAGTAGCAGCAGCTGCGG+TGG | 0.562058 | 8:+84304692 | None:intergenic |
GAATGGTCCAGCAGCAGAAG+TGG | 0.565888 | 8:-84305370 | MsaT046419.1:CDS |
TTCTGCATTTGCTTGATCAG+CGG | 0.571955 | 8:+84305224 | None:intergenic |
CCCACCTGCTGCTATGCCAA+TGG | 0.574594 | 8:-84304721 | MsaT046419.1:CDS |
GAAGGCCGGAGAATTTGGAT+TGG | 0.577352 | 8:+84304421 | None:intergenic |
CGCGACACTACAGATAATAA+CGG | 0.582926 | 8:-84304531 | MsaT046419.1:CDS |
GCCATTGGCATAGCAGCAGG+TGG | 0.589340 | 8:+84304720 | None:intergenic |
TGTAATATGCGCGAGGACAA+GGG | 0.590385 | 8:+84304992 | None:intergenic |
CAACTCCTTATTACTAACAC+CGG | 0.591469 | 8:-84305980 | MsaT046419.1:CDS |
CAAATGTCTCAAGATGTTGG+AGG | 0.596501 | 8:-84304399 | MsaT046419.1:CDS |
AATCACCTGATCATGTTCTG+TGG | 0.597094 | 8:+84305546 | None:intergenic |
GTGCTTATTAGATTCATCGT+CGG | 0.598438 | 8:+84306577 | None:intergenic |
ATTATAGGTTCAACGTTGTG+CGG | 0.604622 | 8:-84304796 | MsaT046419.1:intron |
CGCATATTACAGATGCACAA+TGG | 0.609217 | 8:-84304980 | MsaT046419.1:CDS |
TGCAGAGAACCAAAAGCTGA+AGG | 0.611336 | 8:-84305650 | MsaT046419.1:CDS |
CACCGCGGATCCAAACTTCA+CGG | 0.616851 | 8:-84304325 | MsaT046419.1:CDS |
TGCCCGATCAGAAGCCCACA+TGG | 0.617135 | 8:-84305169 | MsaT046419.1:intron |
CGGAAGTGATCAATCAATGG+TGG | 0.617601 | 8:-84305960 | MsaT046419.1:CDS |
TGCCGTGAAGTTTGGATCCG+CGG | 0.618501 | 8:+84304323 | None:intergenic |
GTCAATGTCAAGTGCTGATG+GGG | 0.622615 | 8:-84304658 | MsaT046419.1:CDS |
TGTCCAAGCTGGAATTGGGA+AGG | 0.625433 | 8:+84304501 | None:intergenic |
TTAGACGGAGCAATTGCAAG+AGG | 0.625946 | 8:-84305689 | MsaT046419.1:intron |
GAATTCTGGCTAGTAAATTG+GGG | 0.628387 | 8:+84304628 | None:intergenic |
GTGGCTAGAAAGTTGATGAA+TGG | 0.628570 | 8:-84305387 | MsaT046419.1:CDS |
GTAAGGTCTAGTGTCACAGT+AGG | 0.632116 | 8:+84304555 | None:intergenic |
TGAGGAGAAAGGAGATGGTG+TGG | 0.634590 | 8:-84305409 | MsaT046419.1:CDS |
TTACTGTTATTGTTGCTGGG+AGG | 0.638488 | 8:+84304261 | None:intergenic |
ATAGGTTCAACGTTGTGCGG+AGG | 0.648017 | 8:-84304793 | MsaT046419.1:intron |
TGGTGCTGATGCTGAGAGTG+TGG | 0.648731 | 8:+84304581 | None:intergenic |
CCATTGGCATAGCAGCAGGT+GGG | 0.656238 | 8:+84304721 | None:intergenic |
GATTGTCAAAGGAAAAGCTG+AGG | 0.658561 | 8:-84305427 | MsaT046419.1:CDS |
AGTGCTTGTGCAATCACTTG+TGG | 0.658579 | 8:+84304450 | None:intergenic |
AGGAGCAGCACCAATTATGG+AGG | 0.660834 | 8:+84304281 | None:intergenic |
TAACACAGTAGCAGCAGCTG+CGG | 0.661912 | 8:+84304689 | None:intergenic |
TAAGCACAAACGGAGCAACA+TGG | 0.662166 | 8:-84306561 | MsaT046419.1:CDS |
CTGTTGAGTTGGATGCAACT+GGG | 0.664888 | 8:+84304371 | None:intergenic |
GTGCATCTGTAATATGCGCG+AGG | 0.676244 | 8:+84304985 | None:intergenic |
ACTAATATAGTATACCATGT+GGG | 0.681722 | 8:+84305155 | None:intergenic |
AGATCAATGATGGATGCCAA+TGG | 0.705200 | 8:-84305047 | MsaT046419.1:CDS |
AATGAAGATGATCAAAATCG+CGG | 0.707922 | 8:-84306523 | MsaT046419.1:CDS |
GGAGAAAGGAGATGGTGTGG+TGG | 0.745088 | 8:-84305406 | MsaT046419.1:CDS |
TCAGCGCGGAGATTGCAATG+AGG | 0.745989 | 8:+84306373 | None:intergenic |
ACTAAGTGCCGCCATCACCG+CGG | 0.753006 | 8:-84304340 | MsaT046419.1:CDS |
GAAGATGATCAAAATCGCGG+CGG | 0.753200 | 8:-84306520 | MsaT046419.1:CDS |
TTACGTTGACATGGTCAGCG+CGG | 0.778275 | 8:+84306359 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr8 | gene | 84304224 | 84306611 | 84304224 | ID=MsaG046419 |
Chr8 | mRNA | 84304224 | 84306611 | 84304224 | ID=MsaT046419.1;Parent=MsaG046419 |
Chr8 | exon | 84304224 | 84304811 | 84304224 | ID=MsaT046419.1.exon6;Parent=MsaT046419.1 |
Chr8 | CDS | 84304224 | 84304811 | 84304224 | ID=cds.MsaT046419.1;Parent=MsaT046419.1 |
Chr8 | exon | 84304954 | 84305067 | 84304954 | ID=MsaT046419.1.exon5;Parent=MsaT046419.1 |
Chr8 | CDS | 84304954 | 84305067 | 84304954 | ID=cds.MsaT046419.1;Parent=MsaT046419.1 |
Chr8 | exon | 84305170 | 84305448 | 84305170 | ID=MsaT046419.1.exon4;Parent=MsaT046419.1 |
Chr8 | CDS | 84305170 | 84305448 | 84305170 | ID=cds.MsaT046419.1;Parent=MsaT046419.1 |
Chr8 | exon | 84305552 | 84305707 | 84305552 | ID=MsaT046419.1.exon3;Parent=MsaT046419.1 |
Chr8 | CDS | 84305552 | 84305707 | 84305552 | ID=cds.MsaT046419.1;Parent=MsaT046419.1 |
Chr8 | exon | 84305910 | 84306011 | 84305910 | ID=MsaT046419.1.exon2;Parent=MsaT046419.1 |
Chr8 | CDS | 84305910 | 84306011 | 84305910 | ID=cds.MsaT046419.1;Parent=MsaT046419.1 |
Chr8 | exon | 84306363 | 84306611 | 84306363 | ID=MsaT046419.1.exon1;Parent=MsaT046419.1 |
Chr8 | CDS | 84306363 | 84306611 | 84306363 | ID=cds.MsaT046419.1;Parent=MsaT046419.1 |
Gene Sequence |
Protein sequence |