Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG046424 | AES92666.1 | 96.207 | 870 | 33 | 0 | 1 | 870 | 1 | 870 | 0.0 | 1748 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG046424 | sp|Q9SSE9|JMJ25_ARATH | 48.814 | 506 | 189 | 8 | 388 | 865 | 429 | 892 | 8.97e-144 | 454 |
MsaG046424 | sp|Q9SSE9|JMJ25_ARATH | 43.316 | 187 | 100 | 5 | 168 | 349 | 155 | 340 | 2.35e-37 | 155 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG046424 | tr|G7JJA9|G7JJA9_MEDTR | 96.207 | 870 | 33 | 0 | 1 | 870 | 1 | 870 | 0.0 | 1748 |
Gene ID | Type | Classification |
---|---|---|
MsaG046424 | TR | Jumonji |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsaG000046 | MsaG046424 | 0.833137 | 1.148947e-55 | 3.641847e-53 |
MsaG000047 | MsaG046424 | 0.830560 | 4.935152e-55 | 1.451253e-52 |
MsaG000461 | MsaG046424 | 0.869457 | 6.193315e-66 | 7.015530e-63 |
MsaG000744 | MsaG046424 | 0.865479 | 1.147265e-64 | 1.104810e-61 |
MsaG000906 | MsaG046424 | 0.805312 | 2.398959e-49 | 3.663336e-47 |
MsaG001397 | MsaG046424 | 0.845818 | 6.018704e-59 | 2.833420e-56 |
MsaG001503 | MsaG046424 | 0.861794 | 1.577682e-63 | 1.313470e-60 |
MsaG001934 | MsaG046424 | 0.896283 | 9.671497e-76 | 3.999762e-72 |
MsaG002146 | MsaG046424 | 0.846235 | 4.640958e-59 | 2.215280e-56 |
MsaG002269 | MsaG046424 | 0.875248 | 7.414654e-68 | 1.077965e-64 |
MsaG002811 | MsaG046424 | 0.809275 | 3.499121e-50 | 5.871619e-48 |
MsaG003024 | MsaG046424 | 0.814095 | 3.166798e-51 | 5.983929e-49 |
MsaG003373 | MsaG046424 | 0.811049 | 1.456679e-50 | 2.552143e-48 |
MsaG003403 | MsaG046424 | 0.816275 | 1.043574e-51 | 2.083690e-49 |
MsaG003706 | MsaG046424 | 0.929966 | 8.854115e-93 | 3.593912e-88 |
MsaG004025 | MsaG046424 | 0.807951 | 6.689656e-50 | 1.087384e-47 |
MsaG004303 | MsaG046424 | 0.800530 | 2.308817e-48 | 3.159258e-46 |
MsaG004413 | MsaG046424 | 0.805626 | 2.062715e-49 | 3.173053e-47 |
MsaG005129 | MsaG046424 | 0.801661 | 1.358795e-48 | 1.907479e-46 |
MsaG005303 | MsaG046424 | 0.853476 | 4.481081e-61 | 2.741855e-58 |
MsaG005665 | MsaG046424 | 0.900588 | 1.454429e-77 | 7.703238e-74 |
MsaG005843 | MsaG046424 | 0.807219 | 9.552235e-50 | 1.525668e-47 |
MsaG006087 | MsaG046424 | 0.849355 | 6.476825e-60 | 3.434151e-57 |
MsaG006263 | MsaG046424 | 0.812511 | 7.028585e-51 | 1.276554e-48 |
MsaG007500 | MsaG046424 | 0.803543 | 5.584542e-49 | 8.185397e-47 |
MsaG007766 | MsaG046424 | 0.809761 | 2.754623e-50 | 4.677091e-48 |
MsaG007821 | MsaG046424 | 0.824005 | 1.805175e-53 | 4.419403e-51 |
MsaG007841 | MsaG046424 | 0.805951 | 1.763875e-49 | 2.734124e-47 |
MsaG007891 | MsaG046424 | 0.800707 | 2.125186e-48 | 2.919746e-46 |
MsaG008046 | MsaG046424 | 0.840882 | 1.232364e-57 | 4.945845e-55 |
MsaG008052 | MsaG046424 | 0.845015 | 9.905296e-59 | 4.541643e-56 |
MsaG008510 | MsaG046424 | 0.811978 | 9.173139e-51 | 1.644182e-48 |
MsaG008603 | MsaG046424 | 0.826431 | 4.848898e-54 | 1.269102e-51 |
MsaG009191 | MsaG046424 | 0.801331 | 1.586866e-48 | 2.211026e-46 |
MsaG009271 | MsaG046424 | 0.840023 | 2.061659e-57 | 8.054448e-55 |
MsaG009273 | MsaG046424 | 0.868655 | 1.124364e-65 | 1.232082e-62 |
MsaG009400 | MsaG046424 | 0.862643 | 8.685142e-64 | 7.474814e-61 |
MsaG010484 | MsaG046424 | 0.857642 | 2.767800e-62 | 1.969325e-59 |
MsaG011023 | MsaG046424 | 0.800023 | 2.924968e-48 | 3.956849e-46 |
MsaG011194 | MsaG046424 | 0.858224 | 1.862867e-62 | 1.354565e-59 |
MsaG011395 | MsaG046424 | 0.825686 | 7.276057e-54 | 1.865267e-51 |
MsaG011499 | MsaG046424 | 0.893365 | 1.501084e-74 | 5.289991e-71 |
MsaG011845 | MsaG046424 | 0.842935 | 3.554732e-58 | 1.523204e-55 |
MsaG012477 | MsaG046424 | 0.803552 | 5.559640e-49 | 8.150651e-47 |
MsaG042162 | MsaG046424 | 0.818715 | 2.960919e-52 | 6.295607e-50 |
MsaG042207 | MsaG046424 | 0.832230 | 1.924062e-55 | 5.938789e-53 |
MsaG042263 | MsaG046424 | 0.827388 | 2.870963e-54 | 7.717386e-52 |
MsaG042341 | MsaG046424 | 0.844777 | 1.147965e-58 | 5.222006e-56 |
MsaG042337 | MsaG046424 | 0.813342 | 4.628594e-51 | 8.582415e-49 |
MsaG042729 | MsaG046424 | 0.831613 | 2.727935e-55 | 8.270619e-53 |
MsaG042780 | MsaG046424 | 0.804717 | 3.189201e-49 | 4.803355e-47 |
MsaG042801 | MsaG046424 | 0.817851 | 4.634990e-52 | 9.637159e-50 |
MsaG043345 | MsaG046424 | 0.851101 | 2.109481e-60 | 1.187532e-57 |
MsaG044149 | MsaG046424 | 0.807868 | 6.965072e-50 | 1.129926e-47 |
MsaG044571 | MsaG046424 | 0.807158 | 9.840183e-50 | 1.569393e-47 |
MsaG045759 | MsaG046424 | 0.872414 | 6.641864e-67 | 8.530845e-64 |
MsaG045866 | MsaG046424 | 0.873534 | 2.811574e-67 | 3.791121e-64 |
MsaG045867 | MsaG046424 | 0.801870 | 1.231791e-48 | 1.737444e-46 |
MsaG045888 | MsaG046424 | 0.832862 | 1.343832e-55 | 4.224922e-53 |
MsaG046424 | MsaG046432 | 0.834135 | 6.490201e-56 | 2.118334e-53 |
MsaG046424 | MsaG046580 | 0.872152 | 8.112664e-67 | 1.030436e-63 |
MsaG046424 | MsaG046781 | 0.820345 | 1.263078e-52 | 2.803545e-50 |
MsaG046424 | MsaG046886 | 0.803623 | 5.374113e-49 | 7.891442e-47 |
MsaG046424 | MsaG046962 | 0.916487 | 4.209130e-85 | 6.155667e-81 |
MsaG046424 | MsaG047181 | 0.805933 | 1.778823e-49 | 2.756153e-47 |
MsaG046424 | MsaG002750 | 0.814090 | 3.174245e-51 | 5.997251e-49 |
MsaG046424 | MsaG004179 | 0.818662 | 3.043596e-52 | 6.462488e-50 |
MsaG046424 | MsaG002388 | 0.872253 | 7.514620e-67 | 9.585977e-64 |
MsaG046424 | MsaG002982 | 0.802498 | 9.159706e-49 | 1.310637e-46 |
MsaG046424 | MsaG001341 | 0.832379 | 1.767890e-55 | 5.480483e-53 |
MsaG046424 | MsaG001483 | 0.805731 | 1.961362e-49 | 3.024537e-47 |
MsaG046424 | MsaG002751 | 0.874744 | 1.099861e-67 | 1.564031e-64 |
MsaG046424 | MsaG001948 | 0.837746 | 7.956366e-57 | 2.895309e-54 |
MsaG046424 | MsaG008804 | 0.831049 | 3.748558e-55 | 1.117974e-52 |
MsaG046424 | MsaG006966 | 0.824855 | 1.141346e-53 | 2.859721e-51 |
MsaG046424 | MsaG013433 | 0.851770 | 1.367106e-60 | 7.877700e-58 |
MsaG046424 | MsaG012223 | 0.822686 | 3.656985e-53 | 8.638604e-51 |
MsaG046424 | MsaG013395 | 0.800164 | 2.738177e-48 | 3.715862e-46 |
MsaG046424 | MsaG014890 | 0.802110 | 1.100272e-48 | 1.560345e-46 |
MsaG046424 | MsaG021948 | 0.844542 | 1.327057e-58 | 5.989712e-56 |
MsaG046424 | MsaG027456 | 0.814348 | 2.785892e-51 | 5.297793e-49 |
MsaG046424 | MsaG026953 | 0.822957 | 3.164590e-53 | 7.530694e-51 |
MsaG046424 | MsaG027016 | 0.821523 | 6.784677e-53 | 1.553581e-50 |
MsaG046424 | MsaG029783 | 0.822381 | 4.303472e-53 | 1.008276e-50 |
MsaG046424 | MsaG027700 | 0.842231 | 5.455081e-58 | 2.285131e-55 |
MsaG046424 | MsaG024919 | 0.850549 | 3.012484e-60 | 1.663881e-57 |
MsaG046424 | MsaG029962 | 0.811128 | 1.400838e-50 | 2.458992e-48 |
MsaG046424 | MsaG031792 | 0.808994 | 4.016245e-50 | 6.694298e-48 |
MsaG046424 | MsaG037197 | 0.810267 | 2.146492e-50 | 3.689481e-48 |
MsaG046424 | MsaG039968 | 0.810767 | 1.675824e-50 | 2.915850e-48 |
MsaG046424 | MsaG036674 | 0.800458 | 2.387484e-48 | 3.261634e-46 |
MsaG046424 | MsaG036898 | 0.805501 | 2.190431e-49 | 3.359597e-47 |
MsaG046424 | MsaG034945 | 0.816341 | 1.009037e-51 | 2.018080e-49 |
MsaG046424 | MsaG043568 | 0.802519 | 9.069506e-49 | 1.298362e-46 |
MsaG046424 | MsaG041540 | 0.828219 | 1.815704e-54 | 4.995962e-52 |
MsaG046424 | MsaG042682 | 0.804083 | 4.317795e-49 | 6.408624e-47 |
MsaG046424 | MsaG044450 | 0.800939 | 1.907001e-48 | 2.633567e-46 |
MsaG046424 | MsaG045731 | 0.827701 | 2.416851e-54 | 6.553994e-52 |
MsaG046424 | MsaG043833 | 0.824594 | 1.314063e-53 | 3.269052e-51 |
MsaG012839 | MsaG046424 | 0.815150 | 1.853671e-51 | 3.596832e-49 |
MsaG013264 | MsaG046424 | 0.903783 | 5.685256e-79 | 3.639955e-75 |
MsaG014248 | MsaG046424 | 0.843605 | 2.360586e-58 | 1.033467e-55 |
MsaG015591 | MsaG046424 | 0.906666 | 2.761647e-80 | 2.106791e-76 |
MsaG015779 | MsaG046424 | 0.801786 | 1.281512e-48 | 1.804054e-46 |
MsaG015896 | MsaG046424 | 0.801174 | 1.707986e-48 | 2.371308e-46 |
MsaG017214 | MsaG046424 | 0.815155 | 1.849341e-51 | 3.588891e-49 |
MsaG017334 | MsaG046424 | 0.847423 | 2.203748e-59 | 1.094647e-56 |
MsaG017463 | MsaG046424 | 0.802273 | 1.018676e-48 | 1.450092e-46 |
MsaG017854 | MsaG046424 | 0.815319 | 1.701332e-51 | 3.315434e-49 |
MsaG017855 | MsaG046424 | 0.804501 | 3.536557e-49 | 5.299949e-47 |
MsaG018344 | MsaG046424 | 0.874702 | 1.136193e-67 | 1.612645e-64 |
MsaG018345 | MsaG046424 | 0.815467 | 1.577163e-51 | 3.085046e-49 |
MsaG018630 | MsaG046424 | 0.807260 | 9.364674e-50 | 1.497131e-47 |
MsaG018659 | MsaG046424 | 0.819588 | 1.878009e-52 | 4.085445e-50 |
MsaG018785 | MsaG046424 | 0.800518 | 2.321856e-48 | 3.176221e-46 |
MsaG019502 | MsaG046424 | 0.846837 | 3.185885e-59 | 1.551564e-56 |
MsaG019897 | MsaG046424 | 0.806742 | 1.203950e-49 | 1.901464e-47 |
MsaG020225 | MsaG046424 | 0.800176 | 2.722832e-48 | 3.696024e-46 |
MsaG020683 | MsaG046424 | 0.829518 | 8.834158e-55 | 2.521631e-52 |
MsaG020913 | MsaG046424 | 0.821752 | 6.010110e-53 | 1.384599e-50 |
MsaG020940 | MsaG046424 | 0.844464 | 1.392582e-58 | 6.269203e-56 |
MsaG021342 | MsaG046424 | 0.862818 | 7.674212e-64 | 6.650388e-61 |
MsaG021976 | MsaG046424 | 0.846532 | 3.856022e-59 | 1.858811e-56 |
MsaG022726 | MsaG046424 | 0.861718 | 1.664298e-63 | 1.381555e-60 |
MsaG022736 | MsaG046424 | 0.824407 | 1.453916e-53 | 3.598547e-51 |
MsaG022896 | MsaG046424 | 0.836907 | 1.301085e-56 | 4.615158e-54 |
MsaG023118 | MsaG046424 | 0.822746 | 3.542119e-53 | 8.381102e-51 |
MsaG023256 | MsaG046424 | 0.835278 | 3.357328e-56 | 1.133936e-53 |
MsaG023264 | MsaG046424 | 0.817884 | 4.557581e-52 | 9.484270e-50 |
MsaG023285 | MsaG046424 | 0.818849 | 2.762200e-52 | 5.893703e-50 |
MsaG023676 | MsaG046424 | 0.806353 | 1.452779e-49 | 2.273518e-47 |
MsaG023760 | MsaG046424 | 0.814650 | 2.390697e-51 | 4.580699e-49 |
MsaG023947 | MsaG046424 | 0.807659 | 7.714354e-50 | 1.245133e-47 |
MsaG023948 | MsaG046424 | 0.820997 | 8.959558e-53 | 2.023272e-50 |
MsaG024735 | MsaG046424 | 0.802129 | 1.090133e-48 | 1.546672e-46 |
MsaG025465 | MsaG046424 | 0.826436 | 4.835729e-54 | 1.265840e-51 |
MsaG025882 | MsaG046424 | 0.818834 | 2.782938e-52 | 5.935640e-50 |
MsaG026931 | MsaG046424 | 0.830653 | 4.683785e-55 | 1.380992e-52 |
MsaG027482 | MsaG046424 | 0.810501 | 1.911526e-50 | 3.304504e-48 |
MsaG027861 | MsaG046424 | 0.806456 | 1.382535e-49 | 2.168892e-47 |
MsaG028107 | MsaG046424 | 0.808722 | 4.590649e-50 | 7.601895e-48 |
MsaG028201 | MsaG046424 | 0.914633 | 3.777494e-84 | 4.863676e-80 |
MsaG028680 | MsaG046424 | 0.820336 | 1.269012e-52 | 2.816056e-50 |
MsaG028810 | MsaG046424 | 0.812340 | 7.656110e-51 | 1.384585e-48 |
MsaG028834 | MsaG046424 | 0.803350 | 6.119109e-49 | 8.928940e-47 |
MsaG029372 | MsaG046424 | 0.824845 | 1.147802e-53 | 2.875071e-51 |
MsaG029379 | MsaG046424 | 0.829186 | 1.062731e-54 | 3.004538e-52 |
MsaG029469 | MsaG046424 | 0.805301 | 2.411717e-49 | 3.681887e-47 |
MsaG029804 | MsaG046424 | 0.832471 | 1.678548e-55 | 5.217503e-53 |
MsaG029809 | MsaG046424 | 0.836132 | 2.045178e-56 | 7.087340e-54 |
MsaG029895 | MsaG046424 | 0.812998 | 5.503125e-51 | 1.011686e-48 |
MsaG030031 | MsaG046424 | 0.821915 | 5.510590e-53 | 1.275045e-50 |
MsaG030094 | MsaG046424 | 0.816667 | 8.537051e-52 | 1.721640e-49 |
MsaG030445 | MsaG046424 | 0.808244 | 5.799369e-50 | 9.493419e-48 |
MsaG030522 | MsaG046424 | 0.800696 | 2.136042e-48 | 2.933928e-46 |
MsaG030761 | MsaG046424 | 0.812532 | 6.954757e-51 | 1.263783e-48 |
MsaG031038 | MsaG046424 | 0.809098 | 3.817563e-50 | 6.379073e-48 |
MsaG031065 | MsaG046424 | 0.850830 | 2.514052e-60 | 1.402145e-57 |
MsaG031679 | MsaG046424 | 0.867649 | 2.361635e-65 | 2.483256e-62 |
MsaG032180 | MsaG046424 | 0.898760 | 8.843366e-77 | 4.207576e-73 |
MsaG032798 | MsaG046424 | 0.801713 | 1.326379e-48 | 1.864123e-46 |
MsaG032841 | MsaG046424 | 0.840660 | 1.407765e-57 | 5.610619e-55 |
MsaG033598 | MsaG046424 | 0.837208 | 1.090755e-56 | 3.904578e-54 |
MsaG033927 | MsaG046424 | 0.857272 | 3.557200e-62 | 2.496524e-59 |
MsaG033913 | MsaG046424 | 0.831389 | 3.095526e-55 | 9.323355e-53 |
MsaG033925 | MsaG046424 | 0.870552 | 2.727841e-66 | 3.234536e-63 |
MsaG034372 | MsaG046424 | 0.828401 | 1.642150e-54 | 4.541633e-52 |
MsaG034504 | MsaG046424 | 0.809584 | 3.006624e-50 | 5.083278e-48 |
MsaG035450 | MsaG046424 | 0.906328 | 3.958332e-80 | 2.957390e-76 |
MsaG035638 | MsaG046424 | 0.867978 | 1.853187e-65 | 1.974957e-62 |
MsaG035645 | MsaG046424 | 0.873385 | 3.152555e-67 | 4.223562e-64 |
MsaG035741 | MsaG046424 | 0.851505 | 1.624417e-60 | 9.273378e-58 |
MsaG035864 | MsaG046424 | 0.856905 | 4.559077e-62 | 3.156772e-59 |
MsaG035933 | MsaG046424 | 0.807464 | 8.478318e-50 | 1.362109e-47 |
MsaG035936 | MsaG046424 | 0.868904 | 9.348997e-66 | 1.034907e-62 |
MsaG036481 | MsaG046424 | 0.801717 | 1.323404e-48 | 1.860150e-46 |
MsaG036658 | MsaG046424 | 0.858892 | 1.179814e-62 | 8.795882e-60 |
MsaG036975 | MsaG046424 | 0.870517 | 2.800826e-66 | 3.316372e-63 |
MsaG037010 | MsaG046424 | 0.884103 | 5.473433e-71 | 1.200359e-67 |
MsaG037664 | MsaG046424 | 0.849973 | 4.362330e-60 | 2.362092e-57 |
MsaG037666 | MsaG046424 | 0.867288 | 3.077365e-65 | 3.188373e-62 |
MsaG038048 | MsaG046424 | 0.826692 | 4.202601e-54 | 1.107969e-51 |
MsaG038768 | MsaG046424 | 0.833927 | 7.310199e-56 | 2.371361e-53 |
MsaG039841 | MsaG046424 | 0.807897 | 6.868630e-50 | 1.115037e-47 |
MsaG039958 | MsaG046424 | 0.858031 | 2.125759e-62 | 1.534637e-59 |
MsaG040027 | MsaG046424 | 0.804237 | 4.012532e-49 | 5.976659e-47 |
MsaG040261 | MsaG046424 | 0.820126 | 1.416612e-52 | 3.126151e-50 |
MsaG040352 | MsaG046424 | 0.889927 | 3.431703e-73 | 1.007406e-69 |
MsaG040400 | MsaG046424 | 0.888016 | 1.869674e-72 | 4.976361e-69 |
MsaG040477 | MsaG046424 | 0.811358 | 1.249773e-50 | 2.206212e-48 |
MsaG040895 | MsaG046424 | 0.810220 | 2.196301e-50 | 3.770797e-48 |
MsaG041483 | MsaG046424 | 0.826945 | 3.659690e-54 | 9.716394e-52 |
MsaG041581 | MsaG046424 | 0.828373 | 1.668033e-54 | 4.609691e-52 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG046424 | MtrunA17_Chr4g0075261 | 96.207 | 870 | 33 | 0 | 1 | 870 | 1 | 870 | 0.0 | 1748 |
MsaG046424 | MtrunA17_Chr2g0289121 | 59.974 | 777 | 248 | 14 | 107 | 870 | 99 | 825 | 0.0 | 885 |
MsaG046424 | MtrunA17_Chr1g0211711 | 47.410 | 753 | 315 | 17 | 157 | 864 | 332 | 1048 | 0.0 | 658 |
MsaG046424 | MtrunA17_Chr1g0183311 | 48.257 | 746 | 327 | 16 | 168 | 864 | 144 | 879 | 0.0 | 632 |
MsaG046424 | MtrunA17_Chr7g0275771 | 42.623 | 793 | 355 | 16 | 168 | 866 | 140 | 926 | 0.0 | 619 |
MsaG046424 | MtrunA17_Chr5g0426961 | 45.867 | 750 | 310 | 16 | 161 | 864 | 133 | 832 | 0.0 | 603 |
MsaG046424 | MtrunA17_Chr2g0289031 | 62.037 | 432 | 118 | 4 | 438 | 868 | 11 | 397 | 0.0 | 527 |
MsaG046424 | MtrunA17_Chr1g0211661 | 42.939 | 701 | 307 | 16 | 154 | 807 | 211 | 865 | 1.74e-173 | 525 |
MsaG046424 | MtrunA17_Chr5g0420361 | 44.923 | 650 | 283 | 17 | 247 | 848 | 157 | 779 | 1.14e-169 | 512 |
MsaG046424 | MtrunA17_Chr1g0192011 | 36.813 | 728 | 405 | 12 | 166 | 867 | 265 | 963 | 1.37e-158 | 489 |
MsaG046424 | MtrunA17_Chr6g0472441 | 41.541 | 662 | 292 | 19 | 235 | 848 | 87 | 701 | 1.70e-148 | 455 |
MsaG046424 | MtrunA17_Chr1g0211691 | 40.881 | 658 | 297 | 15 | 152 | 755 | 326 | 945 | 2.48e-139 | 438 |
MsaG046424 | MtrunA17_Chr1g0147021 | 44.874 | 517 | 231 | 11 | 167 | 651 | 869 | 1363 | 3.14e-126 | 417 |
MsaG046424 | MtrunA17_Chr1g0147021 | 68.874 | 151 | 47 | 0 | 718 | 868 | 1549 | 1699 | 4.07e-61 | 226 |
MsaG046424 | MtrunA17_Chr2g0281051 | 33.123 | 794 | 441 | 18 | 144 | 866 | 182 | 956 | 6.85e-125 | 400 |
MsaG046424 | MtrunA17_Chr5g0448301 | 39.785 | 558 | 228 | 16 | 263 | 777 | 139 | 631 | 2.71e-104 | 336 |
MsaG046424 | MtrunA17_Chr4g0048531 | 36.380 | 558 | 280 | 13 | 378 | 866 | 727 | 1278 | 4.64e-97 | 330 |
MsaG046424 | MtrunA17_Chr4g0048531 | 35.081 | 248 | 138 | 8 | 166 | 395 | 258 | 500 | 5.40e-34 | 141 |
MsaG046424 | MtrunA17_Chr2g0289041 | 67.647 | 204 | 63 | 2 | 188 | 388 | 1 | 204 | 7.80e-89 | 280 |
MsaG046424 | MtrunA17_Chr8g0361381 | 60.541 | 185 | 68 | 1 | 434 | 618 | 29 | 208 | 1.76e-72 | 237 |
MsaG046424 | MtrunA17_Chr2g0289091 | 61.579 | 190 | 58 | 5 | 644 | 829 | 242 | 420 | 1.83e-62 | 217 |
MsaG046424 | MtrunA17_Chr2g0289091 | 69.065 | 139 | 43 | 0 | 507 | 645 | 20 | 158 | 1.43e-58 | 206 |
MsaG046424 | MtrunA17_Chr8g0361391 | 55.191 | 183 | 34 | 4 | 688 | 870 | 26 | 160 | 8.53e-56 | 189 |
MsaG046424 | MtrunA17_Chr1g0211701 | 70.536 | 112 | 33 | 0 | 753 | 864 | 4 | 115 | 3.83e-51 | 176 |
MsaG046424 | MtrunA17_Chr7g0231061 | 49.733 | 187 | 82 | 2 | 478 | 660 | 1 | 179 | 2.18e-50 | 176 |
MsaG046424 | MtrunA17_Chr2g0289101 | 61.475 | 122 | 44 | 2 | 296 | 414 | 8 | 129 | 6.06e-43 | 153 |
MsaG046424 | MtrunA17_Chr8g0340381 | 66.667 | 90 | 26 | 2 | 528 | 617 | 33 | 118 | 5.36e-31 | 120 |
MsaG046424 | MtrunA17_Chr8g0364421 | 32.273 | 220 | 121 | 7 | 279 | 482 | 10 | 217 | 3.14e-21 | 93.6 |
MsaG046424 | MtrunA17_Chr8g0364411 | 37.097 | 124 | 74 | 4 | 155 | 275 | 21 | 143 | 1.01e-17 | 80.9 |
MsaG046424 | MtrunA17_Chr1g0211671 | 54.237 | 59 | 27 | 0 | 806 | 864 | 15 | 73 | 1.57e-15 | 74.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG046424 | AT1G62310.1 | 56.148 | 732 | 255 | 9 | 147 | 847 | 181 | 877 | 0.0 | 808 |
MsaG046424 | AT1G11950.1 | 55.263 | 722 | 258 | 8 | 168 | 867 | 193 | 871 | 0.0 | 808 |
MsaG046424 | AT1G11950.3 | 55.263 | 722 | 258 | 8 | 168 | 867 | 193 | 871 | 0.0 | 808 |
MsaG046424 | AT1G11950.2 | 52.454 | 652 | 245 | 8 | 168 | 797 | 193 | 801 | 0.0 | 684 |
MsaG046424 | AT4G00990.1 | 43.025 | 767 | 362 | 18 | 168 | 870 | 80 | 835 | 0.0 | 566 |
MsaG046424 | AT4G00990.3 | 41.690 | 710 | 339 | 18 | 168 | 813 | 80 | 778 | 5.72e-162 | 492 |
MsaG046424 | AT4G00990.2 | 42.023 | 702 | 332 | 18 | 168 | 805 | 80 | 770 | 2.47e-161 | 490 |
MsaG046424 | AT3G07610.1 | 48.814 | 506 | 189 | 8 | 388 | 865 | 429 | 892 | 9.11e-145 | 454 |
MsaG046424 | AT3G07610.1 | 43.316 | 187 | 100 | 5 | 168 | 349 | 155 | 340 | 2.39e-38 | 155 |
MsaG046424 | AT3G07610.3 | 46.476 | 525 | 195 | 9 | 388 | 865 | 429 | 914 | 5.12e-137 | 434 |
MsaG046424 | AT3G07610.3 | 43.316 | 187 | 100 | 5 | 168 | 349 | 155 | 340 | 2.56e-38 | 155 |
MsaG046424 | AT1G09060.2 | 33.612 | 717 | 430 | 14 | 168 | 867 | 206 | 893 | 6.52e-125 | 399 |
MsaG046424 | AT1G09060.1 | 33.612 | 717 | 430 | 14 | 168 | 867 | 206 | 893 | 6.52e-125 | 399 |
MsaG046424 | AT1G09060.4 | 33.612 | 717 | 430 | 14 | 168 | 867 | 220 | 907 | 8.80e-125 | 399 |
MsaG046424 | AT1G09060.3 | 33.612 | 717 | 430 | 14 | 168 | 867 | 220 | 907 | 8.80e-125 | 399 |
MsaG046424 | AT4G21430.1 | 29.679 | 748 | 441 | 15 | 156 | 866 | 215 | 914 | 3.24e-90 | 306 |
MsaG046424 | AT3G07610.2 | 44.565 | 276 | 118 | 5 | 372 | 619 | 419 | 687 | 5.70e-62 | 224 |
MsaG046424 | AT3G07610.2 | 43.316 | 187 | 100 | 5 | 168 | 349 | 155 | 340 | 4.57e-38 | 153 |
Find 173 sgRNAs with CRISPR-Local
Find sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AATACTCGTATGTTCTTTAA+AGG | 0.110692 | 8:-84366068 | MsaT046424.1:CDS |
TTCTCTAGCTTTGTGTTTCT+TGG | 0.148326 | 8:+84364365 | None:intergenic |
CTCGCAGTATGCTGAAAATT+TGG | 0.155349 | 8:-84366809 | MsaT046424.1:CDS |
CCATGTTCTAAAACCTGATA+TGG | 0.202757 | 8:-84365859 | MsaT046424.1:CDS |
TTTGAGGCAGCATGCTTCTT+TGG | 0.209357 | 8:+84368213 | None:intergenic |
AGAACATCACGAACAATAAT+TGG | 0.212049 | 8:+84366669 | None:intergenic |
ACAGTTTCACAAGAAAATTT+TGG | 0.236784 | 8:-84368363 | MsaT046424.1:CDS |
TCTGGATGCGCAAAAGCTTT+TGG | 0.237412 | 8:-84368486 | MsaT046424.1:CDS |
CAAAGCTCATAGGAACAATT+TGG | 0.255616 | 8:+84367113 | None:intergenic |
TCATGCACTGATGACATTTC+CGG | 0.257622 | 8:+84367934 | None:intergenic |
CAGAGAACATATAGAAAATA+AGG | 0.299885 | 8:-84365115 | MsaT046424.1:CDS |
TGTCGCAAGGTCGACCATTT+AGG | 0.315353 | 8:+84365139 | None:intergenic |
GAAGTTCCAATATGTGAATA+GGG | 0.316073 | 8:-84367036 | MsaT046424.1:CDS |
TGACAAATTTGTTTCAGATA+TGG | 0.324144 | 8:+84367433 | None:intergenic |
ACTTCTTCTATAGACATATC+AGG | 0.326397 | 8:+84367716 | None:intergenic |
AGGGCTGATGTATGCCTAAA+TGG | 0.327833 | 8:-84365153 | MsaT046424.1:CDS |
ATGTCATCAGTGCATGAAAA+AGG | 0.335195 | 8:-84367928 | MsaT046424.1:CDS |
AAGTTTCTGTTTCTTCTTTG+AGG | 0.339318 | 8:+84368197 | None:intergenic |
AAGAAGTTGAAGGAGGAGTT+TGG | 0.343772 | 8:-84364725 | MsaT046424.1:intron |
CATGCACTGATGACATTTCC+GGG | 0.344655 | 8:+84367935 | None:intergenic |
GCGTTCAAAAGGAACAATTA+AGG | 0.347282 | 8:-84367642 | MsaT046424.1:intron |
TGAAGTTCCAATATGTGAAT+AGG | 0.348367 | 8:-84367037 | MsaT046424.1:CDS |
AATAAATTCTTCACAATGTC+GGG | 0.349503 | 8:+84365953 | None:intergenic |
AGAAGGAAAAGGAAATACTA+TGG | 0.362427 | 8:-84368403 | MsaT046424.1:CDS |
CATAGCCCCTATTCACATAT+TGG | 0.366484 | 8:+84367030 | None:intergenic |
TCTCTAGCTTTGTGTTTCTT+GGG | 0.369110 | 8:+84364366 | None:intergenic |
GGTATTAGAGTGCAACAATA+TGG | 0.378136 | 8:-84365091 | MsaT046424.1:CDS |
GAAAACACTCGAAAGAATTC+AGG | 0.382065 | 8:-84364909 | MsaT046424.1:CDS |
CATTATAATACCTGCTCAAC+CGG | 0.384038 | 8:+84364871 | None:intergenic |
AACAATTCAGTAAAGCTTCT+AGG | 0.385507 | 8:+84364132 | None:intergenic |
GAAAATGAAACAATGGTAAC+AGG | 0.395384 | 8:-84364991 | MsaT046424.1:CDS |
GTGCCCTGTGGGATATATTT+CGG | 0.395741 | 8:-84364966 | MsaT046424.1:CDS |
TCTCTTCTTAGATGCTAGAT+TGG | 0.395903 | 8:+84368242 | None:intergenic |
TTAATAATACCTCCGCTGTA+TGG | 0.402466 | 8:+84365256 | None:intergenic |
GAGGATATGTTGAAGTTCTC+TGG | 0.404767 | 8:-84368504 | MsaT046424.1:CDS |
TCTGTGTGCTTCTTTCAAAT+TGG | 0.411095 | 8:+84365209 | None:intergenic |
AAAAGGGCATAAAGATGTTC+TGG | 0.411429 | 8:-84368283 | MsaT046424.1:CDS |
TTGTCACTACAGAGACTTTG+TGG | 0.411737 | 8:+84367271 | None:intergenic |
TCGCAGTATGCTGAAAATTT+GGG | 0.419890 | 8:-84366808 | MsaT046424.1:CDS |
CGGAGGTATTATTAACTGAT+AGG | 0.429669 | 8:-84365248 | MsaT046424.1:CDS |
TAGTTGTGTCCCAAAAGAAA+TGG | 0.431073 | 8:-84366907 | MsaT046424.1:CDS |
CTCTTCTTAGATGCTAGATT+GGG | 0.431195 | 8:+84368243 | None:intergenic |
CATACCGATACAAATTCAAA+AGG | 0.431375 | 8:-84368300 | MsaT046424.1:CDS |
AGAGAGGACACTGAAAAGTT+AGG | 0.433154 | 8:-84364943 | MsaT046424.1:CDS |
ACATTTGAGGCAAAGCTCAT+AGG | 0.433228 | 8:+84367103 | None:intergenic |
CCAGCCCGAGGATCAGTATA+CGG | 0.441774 | 8:+84365912 | None:intergenic |
AGGCATACATCAGCCCTCTC+TGG | 0.443538 | 8:+84365159 | None:intergenic |
GTATTTCTTTGCAACATTTG+AGG | 0.457251 | 8:+84367090 | None:intergenic |
AAAGCTCATAGGAACAATTT+GGG | 0.457327 | 8:+84367114 | None:intergenic |
TTGGAACTTCATCTCAGCTC+GGG | 0.458986 | 8:+84367049 | None:intergenic |
AATGTTTGCCTGCGTTCAAA+AGG | 0.459522 | 8:-84367653 | MsaT046424.1:CDS |
TTCCGAAAACATTGGACAAA+TGG | 0.462884 | 8:-84366696 | MsaT046424.1:CDS |
AGTTGTGTCCCAAAAGAAAT+GGG | 0.463161 | 8:-84366906 | MsaT046424.1:CDS |
AACATGGGACAGGTCTGAGC+TGG | 0.463529 | 8:-84366644 | MsaT046424.1:CDS |
GTCTTTGACAGCTTGATCAA+TGG | 0.468451 | 8:+84364154 | None:intergenic |
CTGGATGCCCACATCAAGTC+AGG | 0.469410 | 8:-84364571 | MsaT046424.1:CDS |
GGATCAGTATACGGTTGAAA+TGG | 0.473452 | 8:+84365921 | None:intergenic |
GATCTTCAAATTTATCAGAA+GGG | 0.473985 | 8:+84365982 | None:intergenic |
ACAAAGAGCAGGAGCAGAGC+TGG | 0.474771 | 8:-84368114 | MsaT046424.1:CDS |
AAATACTATGGGATGTTTGA+AGG | 0.476643 | 8:-84368391 | MsaT046424.1:CDS |
GTTCTTTAAAGGTTATATAG+AGG | 0.476754 | 8:-84366057 | MsaT046424.1:CDS |
GTGTGGTGGTAATGAGAAAT+CGG | 0.481094 | 8:-84368430 | MsaT046424.1:CDS |
TGATTTGACTGTTCTTGTCT+AGG | 0.483352 | 8:+84368534 | None:intergenic |
GGGTTGTGGTAGTTCTCTGT+TGG | 0.483953 | 8:-84366883 | MsaT046424.1:CDS |
GAGGCAGTATTTATTCCTGC+TGG | 0.484620 | 8:-84364590 | MsaT046424.1:CDS |
GTGACAAGGAACGTGTCTAT+TGG | 0.486752 | 8:-84367255 | MsaT046424.1:intron |
TCGGGCTGGAACTCTCAATC+TGG | 0.493514 | 8:-84365898 | MsaT046424.1:CDS |
GGATTAAAGAAGAACTTGGC+AGG | 0.496045 | 8:-84365812 | MsaT046424.1:CDS |
TTCTTTAAAGGTTATATAGA+GGG | 0.499890 | 8:-84366056 | MsaT046424.1:CDS |
TTATTGTTCACCGGTTGAGC+AGG | 0.500773 | 8:-84364881 | MsaT046424.1:intron |
AAATCGGAACCAGAAGGAAA+AGG | 0.500939 | 8:-84368414 | MsaT046424.1:CDS |
CTGAGGCGCATTCTCCCACA+TGG | 0.504365 | 8:-84366858 | MsaT046424.1:CDS |
ACATCAAGTCAGGAATCTTA+AGG | 0.504379 | 8:-84364561 | MsaT046424.1:intron |
CAGGCATACTTATTGTTCAC+CGG | 0.508030 | 8:-84364890 | MsaT046424.1:CDS |
GAAGAACATATAGTAATCTC+TGG | 0.510135 | 8:-84366034 | MsaT046424.1:CDS |
AAATTGAACAAACTACTCTT+CGG | 0.511155 | 8:-84366785 | MsaT046424.1:CDS |
ACATGGGTGGATGTCTGCCT+TGG | 0.513331 | 8:-84366841 | MsaT046424.1:CDS |
GGAGCACAAGAAGAAGTTGA+AGG | 0.513811 | 8:-84364735 | MsaT046424.1:CDS |
AGGTCTGAGCTGGGAGCCGA+TGG | 0.514364 | 8:-84366634 | MsaT046424.1:CDS |
TAATAATACCTCCGCTGTAT+GGG | 0.515560 | 8:+84365257 | None:intergenic |
AGATCTTCAAATTTATCAGA+AGG | 0.521629 | 8:+84365981 | None:intergenic |
ACTTGATGTGGGCATCCAGC+AGG | 0.524603 | 8:+84364575 | None:intergenic |
GTTCGTGATGTTCTAAAACA+TGG | 0.525158 | 8:-84366660 | MsaT046424.1:CDS |
CTCTCCGAAATATATCCCAC+AGG | 0.525312 | 8:+84364962 | None:intergenic |
TTCAACCGTATACTGATCCT+CGG | 0.526738 | 8:-84365917 | MsaT046424.1:CDS |
GAGTGTAATGCCAGGAGTGA+TGG | 0.530231 | 8:-84366936 | MsaT046424.1:CDS |
TTCGTGATGTTCTAAAACAT+GGG | 0.530753 | 8:-84366659 | MsaT046424.1:CDS |
ATCTTCAAATTTATCAGAAG+GGG | 0.535676 | 8:+84365983 | None:intergenic |
CTACTTTCAGACATCTAACA+TGG | 0.537773 | 8:-84367512 | MsaT046424.1:intron |
TGTGTTTCTTGGGAAGCTGA+CGG | 0.538542 | 8:+84364376 | None:intergenic |
ATCTTTCACAATGTGTCTGA+GGG | 0.539751 | 8:-84365039 | MsaT046424.1:CDS |
TTCTTCTTAAGACAAAGAGC+AGG | 0.540103 | 8:-84368125 | MsaT046424.1:CDS |
GAAGAAGATGTATCGAGCTA+TGG | 0.550506 | 8:-84366759 | MsaT046424.1:CDS |
TATGGGATTAAAGAAGAACT+TGG | 0.552658 | 8:-84365816 | MsaT046424.1:CDS |
TTAAGATTCCTGACTTGATG+TGG | 0.553851 | 8:+84364563 | None:intergenic |
AAATCACAAGACACTGGTAG+AGG | 0.557418 | 8:+84366987 | None:intergenic |
ATATGTTCTCTGTTGTCGCA+AGG | 0.559696 | 8:+84365126 | None:intergenic |
CTCCACTGATTTCGATAGGA+CGG | 0.560809 | 8:+84365064 | None:intergenic |
GAATAAATTCTTCACAATGT+CGG | 0.560919 | 8:+84365952 | None:intergenic |
CCGTATACTGATCCTCGGGC+TGG | 0.561803 | 8:-84365912 | MsaT046424.1:CDS |
CTAGCATCTAAGAAGAGAGA+TGG | 0.561973 | 8:-84368237 | MsaT046424.1:CDS |
ATTGGAACTTCATCTCAGCT+CGG | 0.562205 | 8:+84367048 | None:intergenic |
GAAGGAAAAGGAAATACTAT+GGG | 0.562668 | 8:-84368402 | MsaT046424.1:CDS |
TGTTGCTCTTCCGAAAACAT+TGG | 0.563196 | 8:-84366704 | MsaT046424.1:CDS |
GTATGCGATGCATCAATCAA+TGG | 0.564613 | 8:-84367860 | MsaT046424.1:intron |
AATTTGGGCAGATTCGATGA+AGG | 0.564967 | 8:+84367129 | None:intergenic |
AGATGCTGAAGCTAAAAGAC+TGG | 0.565379 | 8:-84366007 | MsaT046424.1:CDS |
TCAACCGTATACTGATCCTC+GGG | 0.565860 | 8:-84365916 | MsaT046424.1:CDS |
ACTAACACTTCCATCACTCC+TGG | 0.566645 | 8:+84366926 | None:intergenic |
CGATTGCATGGCTAATTGTG+AGG | 0.570429 | 8:-84366541 | MsaT046424.1:intron |
ACTGCGAGCTTTGTCTTCCA+AGG | 0.570985 | 8:+84366824 | None:intergenic |
AGTGAAGGCCATCGATTGCA+TGG | 0.575237 | 8:-84366553 | MsaT046424.1:CDS |
AAATTTGTTTCAGATATGGA+AGG | 0.578176 | 8:+84367437 | None:intergenic |
CATGTTCTAAAACCTGATAT+GGG | 0.578332 | 8:-84365858 | MsaT046424.1:CDS |
ACAATTAGCCATGCAATCGA+TGG | 0.580189 | 8:+84366545 | None:intergenic |
ATACCGATACAAATTCAAAA+GGG | 0.582996 | 8:-84368299 | MsaT046424.1:CDS |
AGGGGCTATGATTATATGCA+TGG | 0.585379 | 8:-84367017 | MsaT046424.1:CDS |
GTAGTTCTCTGTTGGAGCTG+AGG | 0.590028 | 8:-84366875 | MsaT046424.1:CDS |
TTCTACAGAAAATGAAACAA+TGG | 0.590271 | 8:-84364998 | MsaT046424.1:CDS |
TATCTTTCACAATGTGTCTG+AGG | 0.590309 | 8:-84365040 | MsaT046424.1:CDS |
GATGTTCTAAAACATGGGAC+AGG | 0.591339 | 8:-84366654 | MsaT046424.1:CDS |
GGCGCATTCTCCCACATGGG+TGG | 0.591623 | 8:-84366854 | MsaT046424.1:CDS |
TATCTACCGAGTGTAATGCC+AGG | 0.591693 | 8:-84366944 | MsaT046424.1:CDS |
ACATGGGACAGGTCTGAGCT+GGG | 0.594876 | 8:-84366643 | MsaT046424.1:CDS |
ATATCTCCACTGATTTCGAT+AGG | 0.597449 | 8:+84365060 | None:intergenic |
GAGAACACCGTGCTCCAGAG+AGG | 0.597552 | 8:-84365173 | MsaT046424.1:CDS |
AGAGAACTTCAACATATCCT+CGG | 0.600419 | 8:+84368506 | None:intergenic |
AATGCTCGCCACATGACCAT+CGG | 0.603094 | 8:+84366618 | None:intergenic |
TAAGATTCCTGACTTGATGT+GGG | 0.603534 | 8:+84364564 | None:intergenic |
AGAACACCGTGCTCCAGAGA+GGG | 0.606805 | 8:-84365172 | MsaT046424.1:CDS |
TGTTGCAAAGAAATACGTGA+TGG | 0.607475 | 8:-84367083 | MsaT046424.1:CDS |
CTTCTTCTATAGACATATCA+GGG | 0.611493 | 8:+84367717 | None:intergenic |
TACTATGGGATGTTTGAAGG+AGG | 0.613119 | 8:-84368388 | MsaT046424.1:CDS |
ATCACTCCTGGCATTACACT+CGG | 0.613940 | 8:+84366938 | None:intergenic |
GATTAAAGAAGAACTTGGCA+GGG | 0.616962 | 8:-84365811 | MsaT046424.1:CDS |
GGTAACAGGTAGTGCCCTGT+GGG | 0.617284 | 8:-84364977 | MsaT046424.1:CDS |
TTGTGTCCCAAAAGAAATGG+GGG | 0.617770 | 8:-84366904 | MsaT046424.1:CDS |
GTCTCTAAATCACAAGACAC+TGG | 0.619904 | 8:+84366981 | None:intergenic |
GCTGAAGAATTTCACGAGTG+TGG | 0.620552 | 8:-84368447 | MsaT046424.1:CDS |
TTGTCATGAACAAAGTGTAG+AGG | 0.621423 | 8:-84367416 | MsaT046424.1:CDS |
GCGAGCATTGTGTGATAATG+TGG | 0.622160 | 8:-84366604 | MsaT046424.1:CDS |
CATCAGCCCTCTCTGGAGCA+CGG | 0.622167 | 8:+84365166 | None:intergenic |
AATGAGAAATCGGAACCAGA+AGG | 0.622864 | 8:-84368420 | MsaT046424.1:CDS |
GTGGGATATATTTCGGAGAG+AGG | 0.626190 | 8:-84364959 | MsaT046424.1:CDS |
AAGTTCCAATATGTGAATAG+GGG | 0.632079 | 8:-84367035 | MsaT046424.1:CDS |
ATTAAAGAAGAACTTGGCAG+GGG | 0.632276 | 8:-84365810 | MsaT046424.1:CDS |
ACAGTCAAATCAACATTCCG+AGG | 0.632981 | 8:-84368523 | MsaT046424.1:CDS |
TGGTAGAATCGATAACATAA+CGG | 0.633314 | 8:-84368094 | MsaT046424.1:intron |
CTTTCACAATGTGTCTGAGG+GGG | 0.633363 | 8:-84365037 | MsaT046424.1:CDS |
TGAGGCGCATTCTCCCACAT+GGG | 0.633374 | 8:-84366857 | MsaT046424.1:CDS |
TCTTCAAATTTATCAGAAGG+GGG | 0.635024 | 8:+84365984 | None:intergenic |
AACCGTCCTATCGAAATCAG+TGG | 0.635864 | 8:-84365066 | MsaT046424.1:CDS |
TGGTAACAGGTAGTGCCCTG+TGG | 0.639563 | 8:-84364978 | MsaT046424.1:CDS |
AATCACAAGACACTGGTAGA+GGG | 0.646755 | 8:+84366988 | None:intergenic |
AGGGTGTTCAACAAAATACC+CGG | 0.650067 | 8:-84367953 | MsaT046424.1:CDS |
GCACAAGAAGAAGTTGAAGG+AGG | 0.651643 | 8:-84364732 | MsaT046424.1:CDS |
GAAGAATTTCACGAGTGTGG+TGG | 0.651936 | 8:-84368444 | MsaT046424.1:CDS |
AGATTGAGAGTTCCAGCCCG+AGG | 0.651977 | 8:+84365900 | None:intergenic |
GTTGTGTCCCAAAAGAAATG+GGG | 0.654890 | 8:-84366905 | MsaT046424.1:CDS |
AGGCAGACATCCACCCATGT+GGG | 0.655161 | 8:+84366844 | None:intergenic |
AAGGCAGACATCCACCCATG+TGG | 0.656813 | 8:+84366843 | None:intergenic |
AACCTTGCAGTCGTGCACAA+AGG | 0.657614 | 8:-84364460 | MsaT046424.1:intron |
GCTGGGAGCCGATGGTCATG+TGG | 0.662730 | 8:-84366626 | MsaT046424.1:CDS |
TGGAACTTCATCTCAGCTCG+GGG | 0.672240 | 8:+84367050 | None:intergenic |
ACAAAGTCTCTGTAGTGACA+AGG | 0.677477 | 8:-84367269 | MsaT046424.1:CDS |
ATAAATTCTTCACAATGTCG+GGG | 0.685345 | 8:+84365954 | None:intergenic |
AGAACATATAGAAAATAAGG+AGG | 0.686564 | 8:-84365112 | MsaT046424.1:CDS |
TCACTGTGATATGTCAGATG+CGG | 0.691771 | 8:-84365769 | MsaT046424.1:intron |
TCTTTCACAATGTGTCTGAG+GGG | 0.694238 | 8:-84365038 | MsaT046424.1:CDS |
AGCTAGAGAAGATAAACTTG+AGG | 0.698411 | 8:-84364352 | MsaT046424.1:intron |
TCTCCGAAATATATCCCACA+GGG | 0.704301 | 8:+84364963 | None:intergenic |
TGTGTCCCAAAAGAAATGGG+GGG | 0.738710 | 8:-84366903 | MsaT046424.1:CDS |
GGCTATGATTATATGCATGG+TGG | 0.762734 | 8:-84367014 | MsaT046424.1:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr8 | gene | 84364127 | 84368571 | 84364127 | ID=MsaG046424 |
Chr8 | mRNA | 84364127 | 84368571 | 84364127 | ID=MsaT046424.1;Parent=MsaG046424 |
Chr8 | exon | 84364127 | 84364198 | 84364127 | ID=MsaT046424.1.exon12;Parent=MsaT046424.1 |
Chr8 | CDS | 84364127 | 84364198 | 84364127 | ID=cds.MsaT046424.1;Parent=MsaT046424.1 |
Chr8 | exon | 84364353 | 84364472 | 84364353 | ID=MsaT046424.1.exon11;Parent=MsaT046424.1 |
Chr8 | CDS | 84364353 | 84364472 | 84364353 | ID=cds.MsaT046424.1;Parent=MsaT046424.1 |
Chr8 | exon | 84364562 | 84364647 | 84364562 | ID=MsaT046424.1.exon10;Parent=MsaT046424.1 |
Chr8 | CDS | 84364562 | 84364647 | 84364562 | ID=cds.MsaT046424.1;Parent=MsaT046424.1 |
Chr8 | exon | 84364726 | 84364798 | 84364726 | ID=MsaT046424.1.exon9;Parent=MsaT046424.1 |
Chr8 | CDS | 84364726 | 84364798 | 84364726 | ID=cds.MsaT046424.1;Parent=MsaT046424.1 |
Chr8 | exon | 84364882 | 84365292 | 84364882 | ID=MsaT046424.1.exon8;Parent=MsaT046424.1 |
Chr8 | CDS | 84364882 | 84365292 | 84364882 | ID=cds.MsaT046424.1;Parent=MsaT046424.1 |
Chr8 | exon | 84365770 | 84366099 | 84365770 | ID=MsaT046424.1.exon7;Parent=MsaT046424.1 |
Chr8 | CDS | 84365770 | 84366099 | 84365770 | ID=cds.MsaT046424.1;Parent=MsaT046424.1 |
Chr8 | exon | 84366542 | 84367178 | 84366542 | ID=MsaT046424.1.exon6;Parent=MsaT046424.1 |
Chr8 | CDS | 84366542 | 84367178 | 84366542 | ID=cds.MsaT046424.1;Parent=MsaT046424.1 |
Chr8 | exon | 84367256 | 84367316 | 84367256 | ID=MsaT046424.1.exon5;Parent=MsaT046424.1 |
Chr8 | CDS | 84367256 | 84367316 | 84367256 | ID=cds.MsaT046424.1;Parent=MsaT046424.1 |
Chr8 | exon | 84367392 | 84367524 | 84367392 | ID=MsaT046424.1.exon4;Parent=MsaT046424.1 |
Chr8 | CDS | 84367392 | 84367524 | 84367392 | ID=cds.MsaT046424.1;Parent=MsaT046424.1 |
Chr8 | exon | 84367643 | 84367742 | 84367643 | ID=MsaT046424.1.exon3;Parent=MsaT046424.1 |
Chr8 | CDS | 84367643 | 84367742 | 84367643 | ID=cds.MsaT046424.1;Parent=MsaT046424.1 |
Chr8 | exon | 84367861 | 84367973 | 84367861 | ID=MsaT046424.1.exon2;Parent=MsaT046424.1 |
Chr8 | CDS | 84367861 | 84367973 | 84367861 | ID=cds.MsaT046424.1;Parent=MsaT046424.1 |
Chr8 | exon | 84368095 | 84368571 | 84368095 | ID=MsaT046424.1.exon1;Parent=MsaT046424.1 |
Chr8 | CDS | 84368095 | 84368571 | 84368095 | ID=cds.MsaT046424.1;Parent=MsaT046424.1 |
Gene Sequence |
Protein sequence |