AlfalfaGEDB | MsaG046470

M. sativa ssp. caerulea / MsaG046470

KEGG: -
GO: GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0008150 GO:0009889 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044424 GO:0044464 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:0140110 GO:1901363 GO:1903506 GO:2000112 GO:2001141
PFAM: PF03514.17

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG046470	XP_003610571.1	95.956	544	20	1	1	542	1	544	0.0	1092

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG046470	sp\|Q9M0M5\|SCL13_ARATH	61.368	497	177	5	47	540	40	524	0.0	607

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG046470	tr\|G7JLR5\|G7JLR5_MEDTR	95.956	544	20	1	1	542	1	544	0.0	1092

TFs/TRs:

Gene ID	Type	Classification
MsaG046470	TF	GRAS

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsaG000206	MsaG046470	0.840995	1.151045e-57	4.635996e-55
MsaG000309	MsaG046470	0.811517	1.154451e-50	2.045905e-48
MsaG000352	MsaG046470	0.812326	7.707793e-51	1.393446e-48
MsaG000366	MsaG046470	0.814723	2.303435e-51	4.421570e-49
MsaG000450	MsaG046470	0.834962	4.031110e-56	1.348697e-53
MsaG000759	MsaG046470	0.810390	2.020005e-50	3.482599e-48
MsaG000760	MsaG046470	0.842316	5.180598e-58	2.176209e-55
MsaG000880	MsaG046470	0.816848	7.776252e-52	1.575594e-49
MsaG001366	MsaG046470	0.822976	3.132126e-53	7.457256e-51
MsaG001403	MsaG046470	0.825066	1.018328e-53	2.566304e-51
MsaG001660	MsaG046470	0.819327	2.152579e-52	4.651132e-50
MsaG001911	MsaG046470	0.828272	1.763992e-54	4.860661e-52
MsaG001991	MsaG046470	0.819680	1.789202e-52	3.901731e-50
MsaG002170	MsaG046470	0.810935	1.541654e-50	2.693419e-48
MsaG002889	MsaG046470	0.839091	3.591664e-57	1.362796e-54
MsaG003161	MsaG046470	0.806438	1.394112e-49	2.186168e-47
MsaG003423	MsaG046470	0.802154	1.077581e-48	1.529720e-46
MsaG003529	MsaG046470	0.876446	2.888205e-68	4.430161e-65
MsaG003912	MsaG046470	0.833218	1.096899e-55	3.485111e-53
MsaG003960	MsaG046470	0.800769	2.064659e-48	2.840488e-46
MsaG003964	MsaG046470	0.845262	8.501956e-59	3.929175e-56
MsaG004017	MsaG046470	0.815973	1.217873e-51	2.413063e-49
MsaG004041	MsaG046470	0.836290	1.865524e-56	6.495590e-54
MsaG004271	MsaG046470	0.810696	1.735532e-50	3.014457e-48
MsaG004290	MsaG046470	0.820080	1.450915e-52	3.197962e-50
MsaG004370	MsaG046470	0.832633	1.530773e-55	4.780496e-53
MsaG004361	MsaG046470	0.810057	2.380292e-50	4.070518e-48
MsaG004806	MsaG046470	0.842384	4.971900e-58	2.093221e-55
MsaG004807	MsaG046470	0.807389	8.795712e-50	1.410540e-47
MsaG004845	MsaG046470	0.808436	5.278579e-50	8.680701e-48
MsaG005201	MsaG046470	0.806527	1.335960e-49	2.099268e-47
MsaG005217	MsaG046470	0.819117	2.401251e-52	5.159931e-50
MsaG005244	MsaG046470	0.814158	3.066538e-51	5.803556e-49
MsaG005354	MsaG046470	0.803882	4.751313e-49	7.018843e-47
MsaG005405	MsaG046470	0.828507	1.548987e-54	4.296723e-52
MsaG005584	MsaG046470	0.815369	1.658008e-51	3.235174e-49
MsaG005827	MsaG046470	0.806711	1.222209e-49	1.928849e-47
MsaG005957	MsaG046470	0.828669	1.415911e-54	3.945294e-52
MsaG006165	MsaG046470	0.851625	1.502552e-60	8.612848e-58
MsaG006249	MsaG046470	0.809334	3.399687e-50	5.712777e-48
MsaG006254	MsaG046470	0.801025	1.831947e-48	2.534802e-46
MsaG006350	MsaG046470	0.801978	1.170914e-48	1.655592e-46
MsaG006387	MsaG046470	0.811597	1.109421e-50	1.969996e-48
MsaG006423	MsaG046470	0.814205	2.994068e-51	5.673280e-49
MsaG006590	MsaG046470	0.817956	4.390210e-52	9.153030e-50
MsaG006725	MsaG046470	0.805215	2.513223e-49	3.829244e-47
MsaG006763	MsaG046470	0.805134	2.612149e-49	3.972577e-47
MsaG006877	MsaG046470	0.839469	2.869145e-57	1.101580e-54
MsaG006884	MsaG046470	0.820234	1.338750e-52	2.962819e-50
MsaG007072	MsaG046470	0.814819	2.193630e-51	4.221193e-49
MsaG007413	MsaG046470	0.807772	7.299610e-50	1.181426e-47
MsaG007466	MsaG046470	0.832472	1.677386e-55	5.213997e-53
MsaG007565	MsaG046470	0.821730	6.080837e-53	1.400080e-50
MsaG007600	MsaG046470	0.816151	1.112075e-51	2.213436e-49
MsaG007861	MsaG046470	0.816271	1.045730e-51	2.087753e-49
MsaG007767	MsaG046470	0.806642	1.263698e-49	1.991111e-47
MsaG007950	MsaG046470	0.800047	2.891732e-48	3.913945e-46
MsaG008035	MsaG046470	0.810185	2.234767e-50	3.833522e-48
MsaG008085	MsaG046470	0.819776	1.701554e-52	3.720055e-50
MsaG008105	MsaG046470	0.805459	2.235373e-49	3.425207e-47
MsaG008166	MsaG046470	0.811212	1.343371e-50	2.363016e-48
MsaG008712	MsaG046470	0.845798	6.092630e-59	2.866292e-56
MsaG009060	MsaG046470	0.801754	1.300830e-48	1.829946e-46
MsaG009179	MsaG046470	0.802555	8.917215e-49	1.277610e-46
MsaG009230	MsaG046470	0.830842	4.212435e-55	1.248817e-52
MsaG009827	MsaG046470	0.801784	1.282868e-48	1.805883e-46
MsaG009787	MsaG046470	0.804152	4.178617e-49	6.211756e-47
MsaG009859	MsaG046470	0.805726	1.965404e-49	3.030467e-47
MsaG010062	MsaG046470	0.835575	2.827095e-56	9.633935e-54
MsaG010098	MsaG046470	0.810667	1.760983e-50	3.056486e-48
MsaG010678	MsaG046470	0.818579	3.177147e-52	6.731508e-50
MsaG011079	MsaG046470	0.801869	1.232331e-48	1.738162e-46
MsaG011286	MsaG046470	0.806883	1.124282e-49	1.781481e-47
MsaG011405	MsaG046470	0.839990	2.103130e-57	8.207634e-55
MsaG011580	MsaG046470	0.837799	7.710671e-57	2.810483e-54
MsaG011586	MsaG046470	0.803798	4.945884e-49	7.292097e-47
MsaG011824	MsaG046470	0.819605	1.861024e-52	4.050296e-50
MsaG011783	MsaG046470	0.852614	7.890685e-61	4.683377e-58
MsaG011996	MsaG046470	0.805718	1.973299e-49	3.042035e-47
MsaG012117	MsaG046470	0.834703	4.678936e-56	1.553471e-53
MsaG012262	MsaG046470	0.806575	1.305348e-49	2.053523e-47
MsaG012248	MsaG046470	0.808318	5.594173e-50	9.173381e-48
MsaG012289	MsaG046470	0.823420	2.470904e-53	5.953928e-51
MsaG012290	MsaG046470	0.803610	5.407986e-49	7.938668e-47
MsaG012390	MsaG046470	0.800054	2.883141e-48	3.902935e-46
MsaG012454	MsaG046470	0.800033	2.910722e-48	3.938438e-46
MsaG012553	MsaG046470	0.816295	1.032802e-51	2.063202e-49
MsaG041926	MsaG046470	0.833923	7.327689e-56	2.376744e-53
MsaG042142	MsaG046470	0.838781	4.316585e-57	1.622090e-54
MsaG042535	MsaG046470	0.827077	3.404259e-54	9.071287e-52
MsaG042898	MsaG046470	0.803491	5.722101e-49	8.376822e-47
MsaG043133	MsaG046470	0.800688	2.144856e-48	2.945480e-46
MsaG043414	MsaG046470	0.802461	9.323380e-49	1.332913e-46
MsaG043506	MsaG046470	0.848021	1.511524e-59	7.660526e-57
MsaG043881	MsaG046470	0.810031	2.412021e-50	4.122061e-48
MsaG044233	MsaG046470	0.808861	4.288886e-50	7.125766e-48
MsaG044333	MsaG046470	0.808438	5.275283e-50	8.675609e-48
MsaG044614	MsaG046470	0.804297	3.898152e-49	5.814480e-47
MsaG044623	MsaG046470	0.811240	1.324734e-50	2.331851e-48
MsaG045353	MsaG046470	0.802024	1.145823e-48	1.621770e-46
MsaG045357	MsaG046470	0.805358	2.346409e-49	3.586978e-47
MsaG045392	MsaG046470	0.801620	1.385510e-48	1.943137e-46
MsaG045695	MsaG046470	0.809861	2.622904e-50	4.464128e-48
MsaG045807	MsaG046470	0.805164	2.575595e-49	3.919695e-47
MsaG045813	MsaG046470	0.819797	1.683440e-52	3.682463e-50
MsaG045873	MsaG046470	0.835029	3.876523e-56	1.299683e-53
MsaG045968	MsaG046470	0.804072	4.339560e-49	6.439290e-47
MsaG045984	MsaG046470	0.832767	1.418328e-55	4.446875e-53
MsaG046004	MsaG046470	0.800866	1.972976e-48	2.720224e-46
MsaG046247	MsaG046470	0.817771	4.831846e-52	1.002570e-49
MsaG046214	MsaG046470	0.830157	6.183644e-55	1.797658e-52
MsaG046268	MsaG046470	0.816349	1.004784e-51	2.009989e-49
MsaG046360	MsaG046470	0.800022	2.926350e-48	3.958628e-46
MsaG046470	MsaG047118	0.810006	2.441089e-50	4.169317e-48
MsaG046470	MsaG002031	0.807790	7.236300e-50	1.171689e-47
MsaG046470	MsaG002231	0.804006	4.480321e-49	6.637720e-47
MsaG046470	MsaG007338	0.804156	4.170959e-49	6.200952e-47
MsaG046470	MsaG009633	0.831390	3.094298e-55	9.319829e-53
MsaG046470	MsaG007871	0.832235	1.918592e-55	5.922778e-53
MsaG046470	MsaG010534	0.803433	5.882234e-49	8.599730e-47
MsaG046470	MsaG008766	0.854511	2.262952e-61	1.436669e-58
MsaG046470	MsaG010555	0.800295	2.576252e-48	3.506432e-46
MsaG046470	MsaG011549	0.816553	9.047621e-52	1.819356e-49
MsaG046470	MsaG011837	0.822569	3.892775e-53	9.166591e-51
MsaG046470	MsaG013008	0.833742	8.130459e-56	2.623203e-53
MsaG046470	MsaG013872	0.814558	2.504317e-51	4.787261e-49
MsaG046470	MsaG016152	0.867500	2.634492e-65	2.753030e-62
MsaG046470	MsaG016790	0.824960	1.078161e-53	2.709196e-51
MsaG046470	MsaG014865	0.823177	2.813715e-53	6.735432e-51
MsaG046470	MsaG011633	0.800604	2.230671e-48	3.057458e-46
MsaG046470	MsaG012532	0.809967	2.489259e-50	4.247465e-48
MsaG046470	MsaG013237	0.807066	1.028601e-49	1.636953e-47
MsaG046470	MsaG013071	0.823806	2.009060e-53	4.892138e-51
MsaG046470	MsaG021945	0.843784	2.115155e-58	9.313233e-56
MsaG046470	MsaG024279	0.839895	2.225292e-57	8.658797e-55
MsaG046470	MsaG019319	0.825497	8.061590e-54	2.055818e-51
MsaG046470	MsaG019753	0.825597	7.637028e-54	1.952870e-51
MsaG046470	MsaG027643	0.850554	3.001842e-60	1.658328e-57
MsaG046470	MsaG029395	0.804957	2.844226e-49	4.307669e-47
MsaG046470	MsaG032120	0.812061	8.802898e-51	1.580948e-48
MsaG046470	MsaG032598	0.814553	2.510140e-51	4.797913e-49
MsaG046470	MsaG034520	0.814191	3.015434e-51	5.711649e-49
MsaG046470	MsaG031808	0.809816	2.681363e-50	4.558783e-48
MsaG046470	MsaG031718	0.821754	6.003104e-53	1.383052e-50
MsaG046470	MsaG031107	0.801969	1.175769e-48	1.662124e-46
MsaG046470	MsaG031649	0.811437	1.201251e-50	2.124673e-48
MsaG046470	MsaG033182	0.833938	7.263555e-56	2.356973e-53
MsaG046470	MsaG031222	0.815068	1.932676e-51	3.742434e-49
MsaG046470	MsaG030000	0.806304	1.487435e-49	2.325060e-47
MsaG046470	MsaG032866	0.842306	5.211173e-58	2.188388e-55
MsaG046470	MsaG031699	0.891757	6.576195e-74	2.125021e-70
MsaG046470	MsaG037174	0.806452	1.384676e-49	2.172077e-47
MsaG046470	MsaG038711	0.825875	6.564108e-54	1.691694e-51
MsaG046470	MsaG037024	0.809840	2.649470e-50	4.507199e-48
MsaG046470	MsaG035918	0.802342	9.862375e-49	1.406158e-46
MsaG046470	MsaG039793	0.836315	1.839203e-56	6.408597e-54
MsaG046470	MsaG036743	0.846438	4.087501e-59	1.964192e-56
MsaG046470	MsaG042304	0.812565	6.838818e-51	1.243757e-48
MsaG046470	MsaG042078	0.838017	6.779727e-57	2.487841e-54
MsaG046470	MsaG043685	0.814203	2.997942e-51	5.680277e-49
MsaG012778	MsaG046470	0.834320	5.833051e-56	1.914603e-53
MsaG013321	MsaG046470	0.807638	7.792204e-50	1.257055e-47
MsaG013849	MsaG046470	0.805567	2.121697e-49	3.259206e-47
MsaG013916	MsaG046470	0.801836	1.251627e-48	1.764043e-46
MsaG014085	MsaG046470	0.800567	2.268993e-48	3.107408e-46
MsaG014368	MsaG046470	0.810465	1.946069e-50	3.361301e-48
MsaG014481	MsaG046470	0.808072	6.305478e-50	1.027922e-47
MsaG014542	MsaG046470	0.823061	2.994152e-53	7.145059e-51
MsaG015143	MsaG046470	0.810985	1.503716e-50	2.630374e-48
MsaG015807	MsaG046470	0.871086	1.823227e-66	2.212079e-63
MsaG015813	MsaG046470	0.810560	1.856796e-50	3.214458e-48
MsaG016078	MsaG046470	0.856219	7.238739e-62	4.888256e-59
MsaG016352	MsaG046470	0.816806	7.944570e-52	1.608005e-49
MsaG016540	MsaG046470	0.819912	1.585039e-52	3.477864e-50
MsaG016615	MsaG046470	0.806375	1.437373e-49	2.250576e-47
MsaG016862	MsaG046470	0.808693	4.655342e-50	7.703654e-48
MsaG017053	MsaG046470	0.822114	4.958448e-53	1.153407e-50
MsaG017088	MsaG046470	0.823012	3.072841e-53	7.323185e-51
MsaG017105	MsaG046470	0.837301	1.033304e-56	3.709292e-54
MsaG017313	MsaG046470	0.841573	8.126856e-58	3.333894e-55
MsaG017198	MsaG046470	0.836378	1.771995e-56	6.186457e-54
MsaG017259	MsaG046470	0.845169	9.007731e-59	4.150179e-56
MsaG017614	MsaG046470	0.840950	1.182423e-57	4.755793e-55
MsaG017672	MsaG046470	0.820927	9.293262e-53	2.094744e-50
MsaG017772	MsaG046470	0.805135	2.610549e-49	3.970262e-47
MsaG018059	MsaG046470	0.827503	2.695160e-54	7.267926e-52
MsaG018103	MsaG046470	0.823552	2.301744e-53	5.566206e-51
MsaG018113	MsaG046470	0.805875	1.829527e-49	2.830831e-47
MsaG018135	MsaG046470	0.822704	3.621692e-53	8.559629e-51
MsaG018159	MsaG046470	0.802632	8.599967e-49	1.234325e-46
MsaG018212	MsaG046470	0.830710	4.535521e-55	1.339472e-52
MsaG018240	MsaG046470	0.851170	2.017444e-60	1.138414e-57
MsaG018309	MsaG046470	0.800777	2.056859e-48	2.830297e-46
MsaG018430	MsaG046470	0.826095	5.823955e-54	1.510121e-51
MsaG018560	MsaG046470	0.823463	2.414070e-53	5.823623e-51
MsaG018655	MsaG046470	0.803894	4.725373e-49	6.982361e-47
MsaG018902	MsaG046470	0.804779	3.096617e-49	4.670620e-47
MsaG019007	MsaG046470	0.810055	2.383296e-50	4.075387e-48
MsaG019191	MsaG046470	0.836681	1.485034e-56	5.231714e-54
MsaG019221	MsaG046470	0.800874	1.965911e-48	2.710961e-46
MsaG019297	MsaG046470	0.817732	4.928558e-52	1.021617e-49
MsaG019571	MsaG046470	0.815612	1.464959e-51	2.876141e-49
MsaG020062	MsaG046470	0.842333	5.128620e-58	2.155566e-55
MsaG020296	MsaG046470	0.817823	4.702700e-52	9.771186e-50
MsaG020391	MsaG046470	0.800898	1.944117e-48	2.682318e-46
MsaG020402	MsaG046470	0.815712	1.392297e-51	2.740365e-49
MsaG020481	MsaG046470	0.836772	1.408375e-56	4.975321e-54
MsaG020645	MsaG046470	0.832483	1.666468e-55	5.181783e-53
MsaG020787	MsaG046470	0.837786	7.768863e-57	2.830649e-54
MsaG021423	MsaG046470	0.816294	1.033479e-51	2.064490e-49
MsaG021973	MsaG046470	0.817547	5.423636e-52	1.118904e-49
MsaG022116	MsaG046470	0.840514	1.537155e-57	6.098166e-55
MsaG022227	MsaG046470	0.815273	1.740951e-51	3.388799e-49
MsaG022494	MsaG046470	0.820663	1.067999e-52	2.390406e-50
MsaG023205	MsaG046470	0.822458	4.129940e-53	9.696051e-51
MsaG023396	MsaG046470	0.862474	9.781337e-64	8.362612e-61
MsaG023570	MsaG046470	0.851643	1.485211e-60	8.519276e-58
MsaG023680	MsaG046470	0.817457	5.683666e-52	1.169822e-49
MsaG023798	MsaG046470	0.807290	9.226230e-50	1.476104e-47
MsaG024036	MsaG046470	0.800419	2.431516e-48	3.318851e-46
MsaG024550	MsaG046470	0.807649	7.750997e-50	1.250751e-47
MsaG025282	MsaG046470	0.830717	4.519286e-55	1.334928e-52
MsaG025492	MsaG046470	0.816999	7.194591e-52	1.463489e-49
MsaG026734	MsaG046470	0.832835	1.364092e-55	4.285197e-53
MsaG026937	MsaG046470	0.811159	1.379672e-50	2.423684e-48
MsaG026892	MsaG046470	0.802608	8.697305e-49	1.247624e-46
MsaG027027	MsaG046470	0.839211	3.344891e-57	1.273834e-54
MsaG027093	MsaG046470	0.811105	1.416943e-50	2.485880e-48
MsaG027749	MsaG046470	0.862678	8.475547e-64	7.303325e-61
MsaG027868	MsaG046470	0.812580	6.786484e-51	1.234706e-48
MsaG028091	MsaG046470	0.821399	7.245112e-53	1.653535e-50
MsaG028286	MsaG046470	0.814709	2.319925e-51	4.451683e-49
MsaG028487	MsaG046470	0.865987	7.939721e-65	7.803095e-62
MsaG028713	MsaG046470	0.822061	5.101805e-53	1.185054e-50
MsaG028937	MsaG046470	0.810663	1.764330e-50	3.062019e-48
MsaG028925	MsaG046470	0.800085	2.841408e-48	3.849118e-46
MsaG028990	MsaG046470	0.810057	2.380292e-50	4.070518e-48
MsaG029164	MsaG046470	0.829407	9.396481e-55	2.673538e-52
MsaG029232	MsaG046470	0.816224	1.071364e-51	2.136350e-49
MsaG029360	MsaG046470	0.814852	2.157343e-51	4.154771e-49
MsaG029361	MsaG046470	0.820842	9.722237e-53	2.186305e-50
MsaG029459	MsaG046470	0.801325	1.591447e-48	2.217085e-46
MsaG030267	MsaG046470	0.842845	3.755473e-58	1.604565e-55
MsaG030548	MsaG046470	0.813712	3.841260e-51	7.188938e-49
MsaG031645	MsaG046470	0.818743	2.918160e-52	6.209103e-50
MsaG031819	MsaG046470	0.805551	2.138705e-49	3.284052e-47
MsaG032101	MsaG046470	0.823917	1.891859e-53	4.620538e-51
MsaG032404	MsaG046470	0.811105	1.416943e-50	2.485880e-48
MsaG032815	MsaG046470	0.803309	6.240273e-49	9.097000e-47
MsaG033134	MsaG046470	0.850074	4.087718e-60	2.220823e-57
MsaG033688	MsaG046470	0.808392	5.395231e-50	8.862889e-48
MsaG034285	MsaG046470	0.802163	1.073047e-48	1.523607e-46
MsaG034444	MsaG046470	0.847950	1.581077e-59	7.993777e-57
MsaG034605	MsaG046470	0.849136	7.445602e-60	3.918310e-57
MsaG035051	MsaG046470	0.823081	2.961618e-53	7.071350e-51
MsaG035152	MsaG046470	0.810133	2.293337e-50	3.928976e-48
MsaG035439	MsaG046470	0.827168	3.239052e-54	8.653089e-52
MsaG035749	MsaG046470	0.825156	9.699240e-54	2.450286e-51
MsaG036429	MsaG046470	0.800747	2.085736e-48	2.868060e-46
MsaG037061	MsaG046470	0.836307	1.847435e-56	6.435847e-54
MsaG039418	MsaG046470	0.813316	4.689722e-51	8.690089e-49
MsaG039424	MsaG046470	0.804216	4.051959e-49	6.032512e-47
MsaG039760	MsaG046470	0.825720	7.143516e-54	1.833064e-51
MsaG040408	MsaG046470	0.802303	1.004234e-48	1.430545e-46
MsaG040435	MsaG046470	0.823528	2.331890e-53	5.635436e-51
MsaG040474	MsaG046470	0.800224	2.663653e-48	3.619534e-46
MsaG040909	MsaG046470	0.807260	9.364626e-50	1.497124e-47
MsaG041481	MsaG046470	0.806320	1.476464e-49	2.308759e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG046470	MtrunA17_Chr4g0076091	95.956	544	20	1	1	542	1	544	0.0	1092
MsaG046470	MtrunA17_Chr5g0447691	56.831	549	222	7	1	540	1	543	0.0	603
MsaG046470	MtrunA17_Chr2g0290241	66.430	423	139	2	120	542	7	426	0.0	580
MsaG046470	MtrunA17_Chr5g0445331	52.976	504	222	8	49	540	31	531	2.74e-179	515
MsaG046470	MtrunA17_Chr3g0101141	47.594	561	253	9	1	540	1	541	9.85e-175	504
MsaG046470	MtrunA17_Chr2g0319091	49.787	470	183	4	116	540	117	578	2.38e-159	466
MsaG046470	MtrunA17_Chr1g0159461	47.568	370	193	1	171	540	223	591	2.69e-129	390
MsaG046470	MtrunA17_Chr3g0125811	40.316	506	258	9	68	540	75	569	1.21e-125	379
MsaG046470	MtrunA17_Chr7g0224271	35.930	398	224	5	163	542	290	674	3.72e-72	243
MsaG046470	MtrunA17_Chr2g0306641	33.258	442	261	10	111	540	67	486	5.49e-68	228
MsaG046470	MtrunA17_Chr3g0110971	33.681	383	224	8	173	540	219	586	5.71e-66	224
MsaG046470	MtrunA17_Chr8g0376381	34.140	372	220	9	174	540	170	521	5.52e-65	220
MsaG046470	MtrunA17_Chr7g0236851	35.106	376	227	6	171	540	292	656	7.29e-64	220
MsaG046470	MtrunA17_Chr4g0031721	31.733	375	254	2	168	541	311	684	4.57e-63	219
MsaG046470	MtrunA17_Chr7g0238891	30.749	374	257	2	168	540	367	739	4.99e-61	214
MsaG046470	MtrunA17_Chr4g0031731	32.021	381	243	7	168	538	249	623	1.54e-60	211
MsaG046470	MtrunA17_Chr4g0031711	31.088	386	246	8	168	541	356	733	2.30e-60	212
MsaG046470	MtrunA17_Chr2g0328391	30.809	383	249	6	168	541	294	669	3.81e-60	210
MsaG046470	MtrunA17_Chr2g0328381	30.053	376	255	4	168	540	270	640	3.95e-59	207
MsaG046470	MtrunA17_Chr4g0031701	31.496	381	245	7	168	538	249	623	5.03e-59	206
MsaG046470	MtrunA17_Chr2g0328341	30.952	378	251	6	168	541	267	638	1.49e-57	202
MsaG046470	MtrunA17_Chr4g0031741	32.454	379	248	6	166	541	277	650	7.85e-56	198
MsaG046470	MtrunA17_Chr2g0328411	29.211	380	264	4	162	540	278	653	9.73e-56	199
MsaG046470	MtrunA17_Chr7g0245601	34.247	365	224	7	177	540	442	791	1.68e-54	197
MsaG046470	MtrunA17_Chr8g0357601	32.474	388	234	8	168	540	177	551	8.62e-54	191
MsaG046470	MtrunA17_Chr2g0328431	29.710	414	265	9	136	541	259	654	9.93e-54	192
MsaG046470	MtrunA17_Chr6g0468561	31.948	385	231	10	171	540	293	661	2.07e-53	192
MsaG046470	MtrunA17_Chr4g0057891	30.412	388	247	6	168	542	144	521	1.69e-51	184
MsaG046470	MtrunA17_Chr2g0328401	29.577	355	243	5	164	516	281	630	1.70e-50	183
MsaG046470	MtrunA17_Chr3g0085681	27.578	417	245	6	174	540	26	435	2.14e-49	176
MsaG046470	MtrunA17_Chr2g0328361	29.474	380	227	10	168	540	269	614	7.04e-46	170
MsaG046470	MtrunA17_Chr4g0057291	29.534	386	250	10	168	541	287	662	4.15e-45	169
MsaG046470	MtrunA17_Chr1g0183641	34.426	305	182	8	242	542	188	478	3.67e-44	163
MsaG046470	MtrunA17_Chr4g0039661	32.857	350	218	10	197	540	216	554	1.74e-43	162
MsaG046470	MtrunA17_Chr1g0200401	30.976	410	236	15	160	540	67	458	2.96e-43	160
MsaG046470	MtrunA17_Chr4g0038761	30.894	369	235	9	177	540	88	441	8.93e-43	158
MsaG046470	MtrunA17_Chr5g0401131	29.016	386	246	11	173	540	114	489	5.79e-42	157
MsaG046470	MtrunA17_Chr5g0424131	30.423	355	227	9	202	542	152	500	6.37e-40	152
MsaG046470	MtrunA17_Chr3g0114841	28.933	356	226	7	205	542	155	501	2.76e-39	150
MsaG046470	MtrunA17_Chr3g0085361	28.319	339	187	5	251	540	18	349	8.66e-39	145
MsaG046470	MtrunA17_Chr2g0328371	32.937	252	158	5	252	497	5	251	1.98e-38	141
MsaG046470	MtrunA17_Chr2g0294461	25.831	391	268	8	163	540	203	584	4.80e-37	144
MsaG046470	MtrunA17_Chr4g0053901	27.553	421	246	10	170	540	56	467	1.94e-35	138
MsaG046470	MtrunA17_Chr2g0329591	28.571	392	243	11	172	540	73	450	3.52e-35	137
MsaG046470	MtrunA17_Chr2g0294471	24.165	389	277	8	163	540	194	575	1.60e-33	134
MsaG046470	MtrunA17_Chr5g0401421	25.412	425	252	10	170	540	32	445	1.06e-32	130
MsaG046470	MtrunA17_Chr7g0270031	24.277	346	246	8	202	540	217	553	1.58e-27	116
MsaG046470	MtrunA17_Chr4g0012071	24.802	379	252	10	174	542	197	552	4.81e-26	112
MsaG046470	MtrunA17_Chr5g0396491	30.909	220	139	5	173	387	56	267	2.58e-25	109
MsaG046470	MtrunA17_Chr5g0396491	32.886	149	99	1	393	540	329	477	4.41e-22	99.4
MsaG046470	MtrunA17_Chr7g0230731	24.409	381	252	9	174	542	373	729	2.63e-25	110
MsaG046470	MtrunA17_Chr8g0383981	25.377	398	259	14	158	541	123	496	1.27e-24	107
MsaG046470	MtrunA17_Chr4g0038851	31.163	215	140	3	168	381	43	250	9.24e-24	104
MsaG046470	MtrunA17_Chr4g0038851	34.228	149	97	1	393	540	320	468	5.98e-22	99.0
MsaG046470	MtrunA17_Chr7g0230771	24.147	381	253	9	174	542	376	732	2.02e-23	104
MsaG046470	MtrunA17_Chr1g0194621	23.782	349	243	8	205	540	179	517	8.65e-23	102
MsaG046470	MtrunA17_Chr8g0344101	25.250	400	248	14	171	540	221	599	3.65e-22	100
MsaG046470	MtrunA17_Chr8g0373561	23.575	386	262	12	169	542	178	542	3.35e-20	94.0
MsaG046470	MtrunA17_Chr2g0323111	24.719	178	126	3	368	541	133	306	8.22e-13	69.7

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG046470	AT4G17230.1	61.167	497	178	5	47	540	40	524	0.0	603
MsaG046470	AT4G17230.2	61.167	497	178	5	47	540	40	524	0.0	603
MsaG046470	AT5G48150.1	53.877	503	209	7	46	540	2	489	0.0	521
MsaG046470	AT5G48150.4	53.877	503	209	7	46	540	2	489	0.0	521
MsaG046470	AT5G48150.2	53.877	503	209	7	46	540	2	489	0.0	521
MsaG046470	AT5G48150.3	53.877	503	209	7	46	540	2	489	0.0	521
MsaG046470	AT1G50600.3	56.027	448	190	4	94	540	84	525	3.57e-173	500
MsaG046470	AT1G50600.2	56.027	448	190	4	94	540	159	600	1.74e-172	501
MsaG046470	AT1G50600.1	56.027	448	190	4	94	540	155	596	2.12e-172	500
MsaG046470	AT2G04890.1	55.718	411	170	4	130	540	14	412	1.75e-158	458
MsaG046470	AT1G21450.1	42.568	444	239	4	112	540	150	592	1.62e-128	388
MsaG046470	AT1G07530.1	33.600	375	246	3	169	541	392	765	6.90e-67	231
MsaG046470	AT3G03450.1	35.849	371	224	9	174	540	184	544	1.56e-66	225
MsaG046470	AT5G52510.1	36.311	347	196	7	209	540	303	639	6.90e-66	226
MsaG046470	AT1G14920.1	33.867	375	221	8	174	540	173	528	8.64e-66	223
MsaG046470	AT1G66350.1	34.409	372	217	10	174	540	156	505	2.54e-65	221
MsaG046470	AT2G01570.1	33.867	375	221	8	174	540	225	580	1.83e-62	215
MsaG046470	AT5G17490.1	33.511	376	228	9	170	540	157	515	2.09e-59	206
MsaG046470	AT5G59450.1	30.263	380	254	5	168	540	222	597	1.41e-58	205
MsaG046470	AT2G29060.2	30.383	418	276	5	131	541	246	655	1.91e-57	203
MsaG046470	AT2G29060.1	30.383	418	276	5	131	541	283	692	2.47e-57	203
MsaG046470	AT3G46600.2	29.839	372	258	3	170	540	1	370	2.55e-56	193
MsaG046470	AT3G46600.1	30.133	375	257	4	168	540	207	578	5.04e-56	198
MsaG046470	AT3G46600.3	29.947	374	259	3	168	540	175	546	7.06e-56	197
MsaG046470	AT1G07520.2	30.809	383	254	8	168	541	149	529	4.02e-55	194
MsaG046470	AT1G07520.4	30.809	383	254	8	168	541	149	529	4.02e-55	194
MsaG046470	AT1G07520.1	30.809	383	254	8	168	541	313	693	1.72e-54	196
MsaG046470	AT1G07520.3	30.809	383	254	8	168	541	314	694	2.15e-54	195
MsaG046470	AT2G37650.2	29.144	374	261	3	168	540	330	700	3.05e-52	189
MsaG046470	AT2G37650.1	29.144	374	261	3	168	540	342	712	3.43e-52	189
MsaG046470	AT3G54220.1	33.784	370	224	9	177	541	297	650	1.06e-50	184
MsaG046470	AT2G29065.1	30.026	383	258	7	168	541	247	628	9.67e-50	181
MsaG046470	AT5G66770.1	33.621	348	213	7	201	540	246	583	1.70e-49	180
MsaG046470	AT3G50650.1	31.805	349	220	7	201	540	202	541	1.27e-43	163
MsaG046470	AT5G41920.1	29.016	386	241	10	166	540	36	399	1.03e-41	155
MsaG046470	AT1G63100.1	30.114	352	221	6	207	541	286	629	2.61e-41	158
MsaG046470	AT1G63100.2	30.114	352	221	6	207	541	311	654	2.73e-41	158
MsaG046470	AT4G37650.1	29.517	393	242	12	173	540	146	528	5.63e-39	150
MsaG046470	AT1G55580.1	30.097	309	192	7	247	540	145	444	1.40e-38	147
MsaG046470	AT3G49950.1	26.992	389	258	12	170	540	27	407	2.29e-35	137
MsaG046470	AT4G08250.1	26.409	337	240	5	208	540	144	476	1.56e-33	133
MsaG046470	AT3G60630.1	26.724	348	228	9	207	542	291	623	1.96e-26	114
MsaG046470	AT1G50420.1	32.093	215	136	3	168	379	52	259	6.17e-26	111
MsaG046470	AT1G50420.1	33.775	151	99	1	393	542	330	480	1.48e-23	104
MsaG046470	AT3G13840.1	26.593	361	228	13	196	540	170	509	6.04e-24	105
MsaG046470	AT2G45160.1	26.685	356	213	13	207	542	313	640	2.33e-22	101
MsaG046470	AT4G00150.1	23.414	457	301	14	97	542	137	555	1.10e-20	95.9
MsaG046470	AT4G36710.1	24.936	389	252	13	168	540	120	484	6.21e-19	90.1
MsaG046470	AT5G67411.1	29.146	199	128	6	291	478	2	198	5.55e-18	83.2

Find 141 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GGAAGTCCTTCAACATATTT+TGG	0.122383	8:+84888732	None:intergenic
CTCCATCAGCTAAATATAAT+TGG	0.146253	8:-84889795	MsaT046470.1:CDS
TCTATGAAACCGGTGATTTC+TGG	0.156389	8:+84890078	None:intergenic
AGGACTTCCATCAAAATTAT+AGG	0.229164	8:-84888718	MsaT046470.1:CDS
ACCCCTGTTATTCGAATAAA+AGG	0.251389	8:+84889328	None:intergenic
AATCCGCTTCTTATCGTCTT+TGG	0.262124	8:+84888916	None:intergenic
ATGTATGCAAACTTAAAATA+TGG	0.291227	8:+84889481	None:intergenic
CACTGGACATACCGCTTAAC+GGG	0.299460	8:+84889941	None:intergenic
AAACCGAGAGCAGCTGAATT+TGG	0.309152	8:+84890225	None:intergenic
TCCTTTCTTTCAAAGGTTTG+TGG	0.333187	8:-84888990	MsaT046470.1:CDS
TGAGACTCTTGTGGAGAAAA+TGG	0.334739	8:+84890012	None:intergenic
GGTGAAGCGTTGCTGCTTGT+AGG	0.359696	8:+84890113	None:intergenic
TGATTTCTGGGTATGATTCC+AGG	0.361344	8:+84890091	None:intergenic
CAGCACATAGATTGGTTTGT+AGG	0.383859	8:+84890175	None:intergenic
CTCTTCTGCTTGGACGTGTT+AGG	0.389557	8:-84888639	None:intergenic
CAAACTAAAGGGAAAATTTA+CGG	0.391093	8:+84889135	None:intergenic
AAAATCAATTATATGAATCC+TGG	0.393012	8:+84889417	None:intergenic
TTTCTATCACCAACCTGCTC+AGG	0.406462	8:-84890205	MsaT046470.1:CDS
GTGAAGATGGTATCGGTTGC+TGG	0.411075	8:-84889655	MsaT046470.1:CDS
AGAAATAGAGAATTCATTGC+TGG	0.413761	8:-84889884	MsaT046470.1:CDS
AACGACTTTCAAACTTTGCC+AGG	0.417891	8:-84889252	MsaT046470.1:CDS
TTCCACAGCGCTGCAATGTC+TGG	0.420397	8:-84889208	MsaT046470.1:CDS
TAGAGACAGATTGTTGAGAT+TGG	0.422530	8:-84889074	MsaT046470.1:CDS
CTATGAAACCGGTGATTTCT+GGG	0.422823	8:+84890079	None:intergenic
CGGCATATGGTGCAAACTAA+AGG	0.425793	8:+84889123	None:intergenic
TTTGATATTGTTGACAGTTA+CGG	0.438331	8:-84889850	MsaT046470.1:CDS
TTCTGTCCAAAATATGTTGA+AGG	0.440203	8:-84888738	MsaT046470.1:CDS
ACACTGGACATACCGCTTAA+CGG	0.441649	8:+84889940	None:intergenic
TCAACAAGGGTAACAACCTT+TGG	0.445568	8:+84889037	None:intergenic
GAGGTTAAGTGCTTACTTGT+TGG	0.446416	8:-84889620	MsaT046470.1:CDS
TCCACAAACCTTTGAAAGAA+AGG	0.448633	8:+84888989	None:intergenic
CAGAGCAGAACTGCGTGGCC+CGG	0.448928	8:-84888889	MsaT046470.1:CDS
TCCATCAGCTAAATATAATT+GGG	0.450403	8:-84889794	MsaT046470.1:CDS
GCTACCACCAGCACATAGAT+TGG	0.452385	8:+84890167	None:intergenic
AGAGATGGTGCTCTCTATCT+TGG	0.454465	8:-84888686	MsaT046470.1:CDS
TGCTGGTGGTAGCAGCAGCC+AGG	0.459468	8:-84890157	MsaT046470.1:CDS
TTGAAAGAAAGGAGAAGTAT+TGG	0.462842	8:+84889000	None:intergenic
TCGAATAAAAGGTGGTCCAC+CGG	0.467899	8:+84889339	None:intergenic
GAAGCGCTTGCACGCAGGCC+CGG	0.469418	8:-84889358	MsaT046470.1:CDS
TCCATCCAGCCTCTTGCTGT+TGG	0.472205	8:+84889688	None:intergenic
GCATCACTGAAGAACTCAAT+TGG	0.473571	8:+84888762	None:intergenic
TTACACTCTCATCCGGCATA+TGG	0.477901	8:+84889110	None:intergenic
AGAGCAGAACTGCGTGGCCC+GGG	0.478609	8:-84888888	MsaT046470.1:CDS
CTTTAGTTTGCACCATATGC+CGG	0.480501	8:-84889122	MsaT046470.1:CDS
GGCATATGGTGCAAACTAAA+GGG	0.480691	8:+84889124	None:intergenic
GTCATTAGCTCTTTGCTCGT+TGG	0.480715	8:+84889532	None:intergenic
TGTAGGTAAATGCCCTGAGC+AGG	0.480980	8:+84890192	None:intergenic
TCCCAATTATATTTAGCTGA+TGG	0.481678	8:+84889793	None:intergenic
TAAGCACTTAACCTCTGGAT+TGG	0.483912	8:+84889628	None:intergenic
ATACTTCTCCTTTCTTTCAA+AGG	0.491697	8:-84888997	MsaT046470.1:CDS
AGGGAGTTGAGAGGGTGGAG+AGG	0.494885	8:-84888841	MsaT046470.1:CDS
GGTGGAGGACTTCAGATTGT+AGG	0.496448	8:-84889277	MsaT046470.1:CDS
CAGGTCTCGTGGAGTTCTGT+TGG	0.498993	8:-84889233	MsaT046470.1:CDS
CGAAAGAAAGATCAGTTCCC+TGG	0.499255	8:+84890139	None:intergenic
ATATTCCAACAGCAAGAGGC+TGG	0.499931	8:-84889693	MsaT046470.1:CDS
CAACAGAACTCCACGAGACC+TGG	0.504019	8:+84889234	None:intergenic
TCATTTCATGCACGCGGTGG+AGG	0.506284	8:-84889292	MsaT046470.1:CDS
CTATCATGTTGACGATGTCC+CGG	0.506811	8:+84888870	None:intergenic
CGAATAAAAGGTGGTCCACC+GGG	0.511303	8:+84889340	None:intergenic
CTATGGCCACCTCTTCTGCT+TGG	0.512179	8:-84888649	MsaT046470.1:CDS
AAGCAATGGCAAATGAATCC+AGG	0.513079	8:-84889435	MsaT046470.1:CDS
GGATAATGTATTGGTGAAGA+TGG	0.513962	8:-84889668	MsaT046470.1:CDS
ACAAGTAAGCACTTAACCTC+TGG	0.514019	8:+84889623	None:intergenic
GCGCTTGCACGCAGGCCCGG+TGG	0.514392	8:-84889355	MsaT046470.1:CDS
CATTTCAAAGCTTGACATGA+AGG	0.514416	8:-84889755	MsaT046470.1:CDS
CGACTTGTAGATCAAGCTTC+CGG	0.514475	8:+84889570	None:intergenic
TTAAGTGCTTACTTGTTGGA+AGG	0.516488	8:-84889616	MsaT046470.1:CDS
CACCCTCTCAACTCCCTCAC+AGG	0.518699	8:+84888847	None:intergenic
GAAAGGAGAAGTATTGGTGT+TGG	0.519467	8:+84889006	None:intergenic
AGAATCACAGTCTATGAAAC+CGG	0.522986	8:+84890068	None:intergenic
TATCATGTTGACGATGTCCC+GGG	0.523589	8:+84888871	None:intergenic
CAATCATCTGACAACACCTA+TGG	0.525163	8:-84889967	MsaT046470.1:CDS
AGGCCAAATTCAGCTGCTCT+CGG	0.528218	8:-84890228	MsaT046470.1:CDS
TCAAACTTTGCCAGGTCTCG+TGG	0.529305	8:-84889244	MsaT046470.1:CDS
ATCATTCCCATCGTCAACAC+TGG	0.531358	8:+84889924	None:intergenic
ATGGTGCTCTCTATCTTGGT+TGG	0.532409	8:-84888682	MsaT046470.1:CDS
ACCGCTTAACGGGGATCCAT+AGG	0.533680	8:+84889951	None:intergenic
GGTTAAGAGTTTGTCGCCAA+AGG	0.537523	8:-84889053	MsaT046470.1:CDS
TTTACGGCGAGGGCTTCTCC+AGG	0.538623	8:+84889151	None:intergenic
GAAATAGAGAATTCATTGCT+GGG	0.540647	8:-84889883	MsaT046470.1:CDS
CATAGGTGTTGTCAGATGAT+TGG	0.540781	8:+84889968	None:intergenic
CTACAAACCAATCTATGTGC+TGG	0.543214	8:-84890174	MsaT046470.1:CDS
AGAGCAAGATTAGAATCGTC+CGG	0.543631	8:-84889589	MsaT046470.1:CDS
TGTGCACAAGCTGTCTATGA+TGG	0.545177	8:-84889718	MsaT046470.1:CDS
GAATTCATTGCTGGGGCCTG+AGG	0.545314	8:-84889875	MsaT046470.1:CDS
TGTTGGATTCTTGCTCAACA+AGG	0.545794	8:+84889023	None:intergenic
GATTTCTGGGTATGATTCCA+GGG	0.546662	8:+84890092	None:intergenic
TCCAACAGCAAGAGGCTGGA+TGG	0.548787	8:-84889689	MsaT046470.1:CDS
GAAAATCTTAGAGTTAGTCC+TGG	0.549759	8:-84889169	MsaT046470.1:CDS
TCTATGCTTACACTCTCATC+CGG	0.551650	8:+84889103	None:intergenic
AAAGGGAAAATTTACGGCGA+GGG	0.556638	8:+84889141	None:intergenic
AGGCTGGATGGATAATGTAT+TGG	0.564066	8:-84889677	MsaT046470.1:CDS
TCAAAGGTTTGTGGAGACAA+TGG	0.564383	8:-84888981	MsaT046470.1:CDS
TAAGTGCTTACTTGTTGGAA+GGG	0.566804	8:-84889615	MsaT046470.1:CDS
TGACAGTTACGGCAGCTGCA+TGG	0.566890	8:-84889839	MsaT046470.1:CDS
CAGCTTGTGCACACAGCAAG+AGG	0.573250	8:+84889728	None:intergenic
TTCTATCACCAACCTGCTCA+GGG	0.576219	8:-84890204	MsaT046470.1:CDS
TCAACAATATCAAAATCCTC+AGG	0.578052	8:+84889859	None:intergenic
GCTGGTGGTAGCAGCAGCCA+GGG	0.581099	8:-84890156	MsaT046470.1:CDS
GTTAGATGATACACTGGCAT+AGG	0.594598	8:+84890041	None:intergenic
TGCATGGAGACTAGCCTCCA+CGG	0.598856	8:-84889823	MsaT046470.1:CDS
GATGATACACTGGCATAGGA+AGG	0.603436	8:+84890045	None:intergenic
GGTGATATTCCAACAGCAAG+AGG	0.604701	8:-84889697	MsaT046470.1:CDS
AGATGCAAATGTCTCAGCAA+AGG	0.607032	8:-84890248	MsaT046470.1:CDS
CAAGCAGCAACGCTTCACCC+TGG	0.609227	8:-84890109	MsaT046470.1:CDS
GCATTGTCTAAATCCTGCCA+TGG	0.611749	8:+84888784	None:intergenic
GTATGTCCAGTGTTGACGAT+GGG	0.612286	8:-84889930	MsaT046470.1:CDS
CAATCATTTCATGCACGCGG+TGG	0.615401	8:-84889295	MsaT046470.1:CDS
CAAACCAATCTATGTGCTGG+TGG	0.616086	8:-84890171	MsaT046470.1:CDS
GTTGGATTCTTGCTCAACAA+GGG	0.617090	8:+84889024	None:intergenic
CTGTGAGGGAGTTGAGAGGG+TGG	0.617736	8:-84888846	MsaT046470.1:CDS
CTAACACGTCCAAGCAGAAG+AGG	0.617768	8:+84888640	None:intergenic
ACCTATGGATCCCCGTTAAG+CGG	0.622318	8:-84889952	MsaT046470.1:CDS
GAATCATACCCAGAAATCAC+CGG	0.623101	8:-84890087	MsaT046470.1:CDS
AGGTGTTGTCAGATGATTGG+TGG	0.624480	8:+84889971	None:intergenic
TATAGGCTTGAACATAGAGA+TGG	0.624582	8:-84888701	MsaT046470.1:CDS
TGGTTGGATGAAGAGAGCTA+TGG	0.630176	8:-84888666	MsaT046470.1:CDS
TGGCATGATTGAGACTCTTG+TGG	0.635813	8:+84890003	None:intergenic
CGTCAACATGATAGCCTGTG+AGG	0.636782	8:-84888861	MsaT046470.1:CDS
GTCAACATGATAGCCTGTGA+GGG	0.638925	8:-84888860	MsaT046470.1:CDS
AGCCTGTGAGGGAGTTGAGA+GGG	0.643951	8:-84888849	MsaT046470.1:CDS
AGTCTTGTTAGATGATACAC+TGG	0.645472	8:+84890035	None:intergenic
GGTATGTCCAGTGTTGACGA+TGG	0.649722	8:-84889931	MsaT046470.1:CDS
TGTATTGGTGAAGATGGTAT+CGG	0.655186	8:-84889662	MsaT046470.1:CDS
GCGCCAAAGACGATAAGAAG+CGG	0.655603	8:-84888919	MsaT046470.1:CDS
TAAAGGGAAAATTTACGGCG+AGG	0.656398	8:+84889140	None:intergenic
CCTGTTATTCGAATAAAAGG+TGG	0.661170	8:+84889331	None:intergenic
ACACGTCCAAGCAGAAGAGG+TGG	0.661453	8:+84888643	None:intergenic
AACCAGACATTGCAGCGCTG+TGG	0.666708	8:+84889206	None:intergenic
TCACAATCATTTCATGCACG+CGG	0.666725	8:-84889298	MsaT046470.1:CDS
AAATAGAGAATTCATTGCTG+GGG	0.674391	8:-84889882	MsaT046470.1:CDS
TTATTGAAGCGCTTGCACGC+AGG	0.680778	8:-84889363	MsaT046470.1:CDS
ACTGGACATACCGCTTAACG+GGG	0.686166	8:+84889942	None:intergenic
GGTAAATGCCCTGAGCAGGT+TGG	0.700911	8:+84890196	None:intergenic
CTGATGGAGATGCTCCGTGG+AGG	0.702180	8:+84889809	None:intergenic
TAGCTGATGGAGATGCTCCG+TGG	0.705467	8:+84889806	None:intergenic
AAATCGCACAGGGAACACAA+TGG	0.711979	8:-84889393	MsaT046470.1:CDS
TTGCTGGAGATCCAATCCAG+AGG	0.713173	8:-84889639	MsaT046470.1:CDS
TAGTGCAGAGCAGAACTGCG+TGG	0.725432	8:-84888894	MsaT046470.1:CDS
TAGCCTGTGAGGGAGTTGAG+AGG	0.733893	8:-84888850	MsaT046470.1:CDS
ATGATTGGTGGTGATCTGAG+TGG	0.759324	8:+84889983	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content

Chromosome	Type	Strat	End	Strand	Name
Chr8	gene	84888640	84890268	84888640	ID=MsaG046470
Chr8	mRNA	84888640	84890268	84888640	ID=MsaT046470.1;Parent=MsaG046470
Chr8	exon	84888640	84890268	84888640	ID=MsaT046470.1.exon1;Parent=MsaT046470.1
Chr8	CDS	84888640	84890268	84888640	ID=cds.MsaT046470.1;Parent=MsaT046470.1

Gene Sequence

>MsaT046470.1

ATGCAAATGTCTCAGCAAAGGCCAAATTCAGCTGCTCTCGGTTTCTATCACCAACCTGCTCAGGGCATTTACCTACAAACCAATCTATGTGCTGGTGGTAGCAGCAGCCAGGGAACTGATCTTTCTTTCGAAACCTACAAGCAGCAACGCTTCACCCTGGAATCATACCCAGAAATCACCGGTTTCATAGACTGTGATTCTCCTTCCTATGCCAGTGTATCATCTAACAAGACTCCATTTTCTCCACAAGAGTCTCAATCATGCCACTCAGATCACCACCAATCATCTGACAACACCTATGGATCCCCGTTAAGCGGTATGTCCAGTGTTGACGATGGGAATGATTTGAAGCACAAACTTAGAGAAATAGAGAATTCATTGCTGGGGCCTGAGGATTTTGATATTGTTGACAGTTACGGCAGCTGCATGGAGACTAGCCTCCACGGAGCATCTCCATCAGCTAAATATAATTGGGATCTGATTGCCGAAAACATTTCAAAGCTTGACATGAAGGAAGTCCTCTTGCTGTGTGCACAAGCTGTCTATGATGGTGATATTCCAACAGCAAGAGGCTGGATGGATAATGTATTGGTGAAGATGGTATCGGTTGCTGGAGATCCAATCCAGAGGTTAAGTGCTTACTTGTTGGAAGGGCTTAGAGCAAGATTAGAATCGTCCGGAAGCTTGATCTACAAGTCGTTGAAATGTGAACAACCAACGAGCAAAGAGCTAATGACTTACATGCACATGCTGTATCAGATTTGTCCATATTTTAAGTTTGCATACATATCTGCAAATGCTGTTATTTTTGAAGCAATGGCAAATGAATCCAGGATTCATATAATTGATTTTCAAATCGCACAGGGAACACAATGGCAAATGCTTATTGAAGCGCTTGCACGCAGGCCCGGTGGACCACCTTTTATTCGAATAACAGGGGTCGATGATTCACAATCATTTCATGCACGCGGTGGAGGACTTCAGATTGTAGGAGAACGACTTTCAAACTTTGCCAGGTCTCGTGGAGTTCTGTTGGAGTTCCACAGCGCTGCAATGTCTGGTTGCGAAGTTCAACGAGAAAATCTTAGAGTTAGTCCTGGAGAAGCCCTCGCCGTAAATTTTCCCTTTAGTTTGCACCATATGCCGGATGAGAGTGTAAGCATAGAGAATCATAGAGACAGATTGTTGAGATTGGTTAAGAGTTTGTCGCCAAAGGTTGTTACCCTTGTTGAGCAAGAATCCAACACCAATACTTCTCCTTTCTTTCAAAGGTTTGTGGAGACAATGGATTTTTACACGGCTATGTTTGAATCAATAGATGTTGCTTGCGCCAAAGACGATAAGAAGCGGATTAGTGCAGAGCAGAACTGCGTGGCCCGGGACATCGTCAACATGATAGCCTGTGAGGGAGTTGAGAGGGTGGAGAGGCATGAAGTTTTTGGAAAGTGGAGGTCGAGATTTTCCATGGCAGGATTTAGACAATGCCAATTGAGTTCTTCAGTGATGCATTCTGTCCAAAATATGTTGAAGGACTTCCATCAAAATTATAGGCTTGAACATAGAGATGGTGCTCTCTATCTTGGTTGGATGAAGAGAGCTATGGCCACCTCTTCTGCTTGGACGTGTTAG

Protein sequence

>MsaT046470.1

MQMSQQRPNSAALGFYHQPAQGIYLQTNLCAGGSSSQGTDLSFETYKQQRFTLESYPEITGFIDCDSPSYASVSSNKTPFSPQESQSCHSDHHQSSDNTYGSPLSGMSSVDDGNDLKHKLREIENSLLGPEDFDIVDSYGSCMETSLHGASPSAKYNWDLIAENISKLDMKEVLLLCAQAVYDGDIPTARGWMDNVLVKMVSVAGDPIQRLSAYLLEGLRARLESSGSLIYKSLKCEQPTSKELMTYMHMLYQICPYFKFAYISANAVIFEAMANESRIHIIDFQIAQGTQWQMLIEALARRPGGPPFIRITGVDDSQSFHARGGGLQIVGERLSNFARSRGVLLEFHSAAMSGCEVQRENLRVSPGEALAVNFPFSLHHMPDESVSIENHRDRLLRLVKSLSPKVVTLVEQESNTNTSPFFQRFVETMDFYTAMFESIDVACAKDDKKRISAEQNCVARDIVNMIACEGVERVERHEVFGKWRSRFSMAGFRQCQLSSSVMHSVQNMLKDFHQNYRLEHRDGALYLGWMKRAMATSSAWTC*