AlfalfaGEDB | MsaG046546

M. sativa ssp. caerulea / MsaG046546

KEGG: -
GO: GO:0003674 GO:0003676 GO:0003677 GO:0005488 GO:0006417 GO:0006950 GO:0006970 GO:0008150 GO:0009628 GO:0009651 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010608 GO:0010628 GO:0019222 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0032268 GO:0032270 GO:0033554 GO:0034248 GO:0034250 GO:0045727 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051246 GO:0051247 GO:0051716 GO:0060255 GO:0065007 GO:0071214 GO:0071470 GO:0071472 GO:0080090 GO:0097159 GO:0104004 GO:1901363 GO:2000112
PFAM: PF12165.11

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG046546	Q40359.1	99.611	257	1	0	1	257	1	257	0.0	536

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG046546	sp\|Q40359\|ALFIN_MEDSA	99.611	257	1	0	1	257	1	257	0.0	536

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG046546	tr\|A0A072UTR5\|A0A072UTR5_MEDTR	99.611	257	0	1	1	257	1	256	0.0	532

TFs/TRs:

Gene ID	Type	Classification
MsaG046546	TF	Alfin-like

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsaG000093	MsaG046546	0.842970	3.479495e-58	1.492635e-55
MsaG000117	MsaG046546	0.851391	1.748502e-60	9.942076e-58
MsaG000309	MsaG046546	0.818347	3.585114e-52	7.550119e-50
MsaG000578	MsaG046546	0.815174	1.830943e-51	3.554968e-49
MsaG000514	MsaG046546	0.855190	1.440353e-61	9.369058e-59
MsaG000547	MsaG046546	0.818950	2.620103e-52	5.605458e-50
MsaG000759	MsaG046546	0.822280	4.539482e-53	1.060668e-50
MsaG000760	MsaG046546	0.829527	8.788704e-55	2.509327e-52
MsaG000828	MsaG046546	0.818389	3.507335e-52	7.394506e-50
MsaG000982	MsaG046546	0.822313	4.461129e-53	1.043314e-50
MsaG001001	MsaG046546	0.884264	4.774137e-71	1.055149e-67
MsaG001366	MsaG046546	0.822214	4.702695e-53	1.096845e-50
MsaG001496	MsaG046546	0.827262	3.075296e-54	8.237553e-52
MsaG002021	MsaG046546	0.832726	1.451703e-55	4.546127e-53
MsaG003423	MsaG046546	0.813214	4.937203e-51	9.125546e-49
MsaG003657	MsaG046546	0.817738	4.915553e-52	1.019046e-49
MsaG004012	MsaG046546	0.857511	3.024852e-62	2.141873e-59
MsaG004279	MsaG046546	0.853742	3.762682e-61	2.324080e-58
MsaG004479	MsaG046546	0.864369	2.547229e-64	2.346634e-61
MsaG004480	MsaG046546	0.811680	1.064452e-50	1.893962e-48
MsaG004754	MsaG046546	0.880064	1.575978e-69	2.852472e-66
MsaG004760	MsaG046546	0.804176	4.130526e-49	6.143662e-47
MsaG004793	MsaG046546	0.828897	1.247805e-54	3.499265e-52
MsaG004830	MsaG046546	0.834509	5.234187e-56	1.727714e-53
MsaG004827	MsaG046546	0.828209	1.826059e-54	5.023015e-52
MsaG004910	MsaG046546	0.803215	6.522894e-49	9.488526e-47
MsaG004929	MsaG046546	0.917597	1.102686e-85	1.748785e-81
MsaG004938	MsaG046546	0.803535	5.605226e-49	8.214124e-47
MsaG004977	MsaG046546	0.839714	2.479681e-57	9.593381e-55
MsaG005051	MsaG046546	0.817068	6.943557e-52	1.414930e-49
MsaG005405	MsaG046546	0.883701	7.690846e-71	1.654300e-67
MsaG005537	MsaG046546	0.843864	2.013653e-58	8.889066e-56
MsaG005830	MsaG046546	0.809051	3.906629e-50	6.520470e-48
MsaG006029	MsaG046546	0.806129	1.618531e-49	2.519464e-47
MsaG006133	MsaG046546	0.851638	1.490145e-60	8.545929e-58
MsaG006249	MsaG046546	0.825167	9.641733e-54	2.436541e-51
MsaG006304	MsaG046546	0.837057	1.192162e-56	4.247981e-54
MsaG006334	MsaG046546	0.819972	1.535934e-52	3.375596e-50
MsaG006572	MsaG046546	0.824655	1.271571e-53	3.168544e-51
MsaG006561	MsaG046546	0.811497	1.165866e-50	2.065169e-48
MsaG007109	MsaG046546	0.852524	8.365579e-61	4.949159e-58
MsaG007159	MsaG046546	0.824142	1.677089e-53	4.121002e-51
MsaG007296	MsaG046546	0.845382	7.891232e-59	3.661891e-56
MsaG007274	MsaG046546	0.826341	5.093181e-54	1.329674e-51
MsaG007568	MsaG046546	0.801621	1.384679e-48	1.942028e-46
MsaG007861	MsaG046546	0.839738	2.444046e-57	9.462776e-55
MsaG008035	MsaG046546	0.808392	5.395231e-50	8.862889e-48
MsaG008085	MsaG046546	0.832278	1.872818e-55	5.788714e-53
MsaG008479	MsaG046546	0.801518	1.453720e-48	2.034064e-46
MsaG008615	MsaG046546	0.825936	6.348677e-54	1.638996e-51
MsaG009059	MsaG046546	0.829667	8.132458e-55	2.331254e-52
MsaG009068	MsaG046546	0.840631	1.432516e-57	5.703919e-55
MsaG009265	MsaG046546	0.877976	8.535345e-69	1.403147e-65
MsaG009701	MsaG046546	0.814666	2.371166e-51	4.545118e-49
MsaG009703	MsaG046546	0.865986	7.947077e-65	7.809920e-62
MsaG010213	MsaG046546	0.802147	1.080830e-48	1.534117e-46
MsaG010571	MsaG046546	0.856232	7.172515e-62	4.846235e-59
MsaG011235	MsaG046546	0.810244	2.170812e-50	3.729238e-48
MsaG011528	MsaG046546	0.832136	2.029594e-55	6.247998e-53
MsaG011824	MsaG046546	0.815929	1.246043e-51	2.466043e-49
MsaG012186	MsaG046546	0.821046	8.728661e-53	1.973681e-50
MsaG012206	MsaG046546	0.855556	1.128690e-61	7.440123e-59
MsaG012261	MsaG046546	0.807980	6.595214e-50	1.072783e-47
MsaG042142	MsaG046546	0.803734	5.098508e-49	7.506228e-47
MsaG042222	MsaG046546	0.822222	4.683571e-53	1.092608e-50
MsaG042327	MsaG046546	0.819207	2.291817e-52	4.936368e-50
MsaG042557	MsaG046546	0.810682	1.747659e-50	3.034465e-48
MsaG042898	MsaG046546	0.813869	3.548351e-51	6.667205e-49
MsaG043414	MsaG046546	0.804368	3.769808e-49	5.632114e-47
MsaG044227	MsaG046546	0.817837	4.668636e-52	9.703741e-50
MsaG044218	MsaG046546	0.807689	7.600793e-50	1.227706e-47
MsaG044411	MsaG046546	0.806970	1.077933e-49	1.711539e-47
MsaG044389	MsaG046546	0.800612	2.221624e-48	3.045689e-46
MsaG044786	MsaG046546	0.815739	1.373230e-51	2.704665e-49
MsaG044849	MsaG046546	0.812357	7.590440e-51	1.373309e-48
MsaG044885	MsaG046546	0.856238	7.146165e-62	4.829458e-59
MsaG044894	MsaG046546	0.831431	3.023776e-55	9.118514e-53
MsaG045004	MsaG046546	0.843060	3.294325e-58	1.417276e-55
MsaG045108	MsaG046546	0.804196	4.090452e-49	6.086931e-47
MsaG045109	MsaG046546	0.822294	4.505680e-53	1.053165e-50
MsaG045225	MsaG046546	0.804373	3.759433e-49	5.617366e-47
MsaG045345	MsaG046546	0.853453	4.551871e-61	2.782802e-58
MsaG045392	MsaG046546	0.812517	7.007184e-51	1.272841e-48
MsaG045576	MsaG046546	0.846403	4.177821e-59	2.005352e-56
MsaG045974	MsaG046546	0.869820	4.723384e-66	5.431995e-63
MsaG046247	MsaG046546	0.826009	6.101914e-54	1.578417e-51
MsaG046313	MsaG046546	0.822453	4.141426e-53	9.721434e-51
MsaG046546	MsaG046554	0.841118	1.069144e-57	4.323107e-55
MsaG046546	MsaG046746	0.817284	6.212527e-52	1.273052e-49
MsaG046546	MsaG046807	0.806076	1.660427e-49	2.581432e-47
MsaG046546	MsaG047014	0.855727	1.006606e-61	6.675795e-59
MsaG046546	MsaG047067	0.832418	1.729276e-55	5.366848e-53
MsaG046546	MsaG047095	0.805475	2.217418e-49	3.399028e-47
MsaG046546	MsaG047152	0.823145	2.862187e-53	6.845573e-51
MsaG046546	MsaG047135	0.823258	2.695136e-53	6.465880e-51
MsaG046546	MsaG000630	0.817436	5.743944e-52	1.181621e-49
MsaG046546	MsaG001986	0.885706	1.392548e-71	3.301478e-68
MsaG046546	MsaG003672	0.822564	3.903388e-53	9.190398e-51
MsaG046546	MsaG003742	0.806440	1.393251e-49	2.184881e-47
MsaG046546	MsaG000974	0.846212	4.707502e-59	2.245322e-56
MsaG046546	MsaG008772	0.850368	3.384634e-60	1.857566e-57
MsaG046546	MsaG010579	0.805911	1.798274e-49	2.784784e-47
MsaG046546	MsaG008766	0.812564	6.843197e-51	1.244512e-48
MsaG046546	MsaG014425	0.820718	1.037817e-52	2.326202e-50
MsaG046546	MsaG016780	0.851189	1.992590e-60	1.125121e-57
MsaG046546	MsaG013226	0.804687	3.235977e-49	4.870308e-47
MsaG046546	MsaG013115	0.806119	1.626758e-49	2.531626e-47
MsaG046546	MsaG014177	0.855022	1.611555e-61	1.041907e-58
MsaG046546	MsaG015710	0.839969	2.128968e-57	8.303083e-55
MsaG046546	MsaG015507	0.862796	7.793321e-64	6.747806e-61
MsaG046546	MsaG019831	0.836975	1.250614e-56	4.445069e-54
MsaG046546	MsaG023443	0.888804	9.326777e-73	2.583283e-69
MsaG046546	MsaG028462	0.833605	8.792230e-56	2.825306e-53
MsaG046546	MsaG028141	0.815466	1.577944e-51	3.086493e-49
MsaG046546	MsaG027790	0.830795	4.325788e-55	1.280663e-52
MsaG046546	MsaG028538	0.802874	7.667109e-49	1.106531e-46
MsaG046546	MsaG033149	0.839673	2.540879e-57	9.817516e-55
MsaG046546	MsaG033548	0.858118	2.002240e-62	1.450050e-59
MsaG046546	MsaG032288	0.843562	2.423895e-58	1.059741e-55
MsaG046546	MsaG030315	0.809642	2.920991e-50	4.945310e-48
MsaG046546	MsaG030190	0.827407	2.840895e-54	7.640499e-52
MsaG046546	MsaG034520	0.867347	2.947973e-65	3.061572e-62
MsaG046546	MsaG034532	0.825286	9.038064e-54	2.291434e-51
MsaG046546	MsaG032266	0.814944	2.058826e-51	3.974200e-49
MsaG046546	MsaG030214	0.817182	6.549635e-52	1.338581e-49
MsaG046546	MsaG032941	0.802335	9.893220e-49	1.410343e-46
MsaG046546	MsaG030000	0.843541	2.454428e-58	1.072391e-55
MsaG046546	MsaG031914	0.820792	9.980888e-53	2.241594e-50
MsaG046546	MsaG031699	0.812223	8.117251e-51	1.463677e-48
MsaG046546	MsaG036784	0.881326	5.588176e-70	1.072862e-66
MsaG046546	MsaG038287	0.818413	3.463414e-52	7.306395e-50
MsaG046546	MsaG036873	0.810487	1.925266e-50	3.327077e-48
MsaG046546	MsaG037156	0.827733	2.373848e-54	6.443285e-52
MsaG046546	MsaG035112	0.874944	9.408294e-68	1.349767e-64
MsaG046546	MsaG036457	0.804599	3.375304e-49	5.069621e-47
MsaG046546	MsaG040777	0.830448	5.253167e-55	1.539857e-52
MsaG046546	MsaG038711	0.851875	1.276998e-60	7.385620e-58
MsaG046546	MsaG036751	0.826019	6.068047e-54	1.570102e-51
MsaG046546	MsaG036540	0.801827	1.257023e-48	1.771284e-46
MsaG046546	MsaG036671	0.831645	2.678796e-55	8.129466e-53
MsaG046546	MsaG038291	0.825998	6.140236e-54	1.587840e-51
MsaG046546	MsaG036963	0.810034	2.408165e-50	4.115844e-48
MsaG046546	MsaG039091	0.804006	4.478999e-49	6.635831e-47
MsaG046546	MsaG035498	0.815525	1.531353e-51	2.999778e-49
MsaG046546	MsaG042833	0.833296	1.048916e-55	3.340127e-53
MsaG046546	MsaG043823	0.828474	1.577313e-54	4.371331e-52
MsaG046546	MsaG043826	0.833556	9.039839e-56	2.900717e-53
MsaG046546	MsaG043146	0.833627	8.683639e-56	2.792190e-53
MsaG046546	MsaG042299	0.811495	1.167350e-50	2.067673e-48
MsaG012761	MsaG046546	0.804486	3.561622e-49	5.335593e-47
MsaG013374	MsaG046546	0.869667	5.296866e-66	6.052898e-63
MsaG015082	MsaG046546	0.822303	4.484299e-53	1.048448e-50
MsaG016368	MsaG046546	0.843065	3.284480e-58	1.413262e-55
MsaG016544	MsaG046546	0.801128	1.745250e-48	2.420512e-46
MsaG016571	MsaG046546	0.883620	8.231317e-71	1.763563e-67
MsaG016826	MsaG046546	0.804117	4.247909e-49	6.309694e-47
MsaG017313	MsaG046546	0.811754	1.025850e-50	1.828598e-48
MsaG017437	MsaG046546	0.835143	3.630798e-56	1.221379e-53
MsaG017441	MsaG046546	0.829181	1.065580e-54	3.012185e-52
MsaG017543	MsaG046546	0.832588	1.570178e-55	4.897130e-53
MsaG017762	MsaG046546	0.860579	3.685156e-63	2.929445e-60
MsaG017772	MsaG046546	0.874090	1.827692e-67	2.525691e-64
MsaG018290	MsaG046546	0.812905	5.767097e-51	1.057733e-48
MsaG018367	MsaG046546	0.866548	5.282598e-65	5.311120e-62
MsaG018417	MsaG046546	0.807744	7.400205e-50	1.196880e-47
MsaG018565	MsaG046546	0.813351	4.608997e-51	8.547859e-49
MsaG018648	MsaG046546	0.830607	4.806696e-55	1.415349e-52
MsaG018738	MsaG046546	0.857378	3.310372e-62	2.332478e-59
MsaG018902	MsaG046546	0.867627	2.399174e-65	2.520621e-62
MsaG018961	MsaG046546	0.804320	3.855601e-49	5.754014e-47
MsaG018988	MsaG046546	0.817748	4.889646e-52	1.013937e-49
MsaG019055	MsaG046546	0.828030	2.015534e-54	5.516389e-52
MsaG019221	MsaG046546	0.853394	4.729946e-61	2.885802e-58
MsaG019303	MsaG046546	0.893812	9.912607e-75	3.579453e-71
MsaG019265	MsaG046546	0.823967	1.842620e-53	4.506357e-51
MsaG019296	MsaG046546	0.826892	3.767954e-54	9.988881e-52
MsaG019542	MsaG046546	0.815018	1.982169e-51	3.833486e-49
MsaG019784	MsaG046546	0.811801	1.001950e-50	1.788108e-48
MsaG020104	MsaG046546	0.873629	2.611453e-67	3.536079e-64
MsaG020296	MsaG046546	0.857853	2.399376e-62	1.720755e-59
MsaG020393	MsaG046546	0.810125	2.302035e-50	3.943151e-48
MsaG020402	MsaG046546	0.815834	1.307740e-51	2.581941e-49
MsaG020616	MsaG046546	0.817954	4.396022e-52	9.164533e-50
MsaG020731	MsaG046546	0.867988	1.840171e-65	1.961809e-62
MsaG020787	MsaG046546	0.811113	1.411559e-50	2.476892e-48
MsaG020963	MsaG046546	0.867191	3.304468e-65	3.410259e-62
MsaG021238	MsaG046546	0.860132	5.024357e-63	3.926485e-60
MsaG021986	MsaG046546	0.849412	6.243792e-60	3.317163e-57
MsaG021997	MsaG046546	0.811529	1.147472e-50	2.034141e-48
MsaG022116	MsaG046546	0.812932	5.689929e-51	1.044276e-48
MsaG022079	MsaG046546	0.800396	2.457753e-48	3.352901e-46
MsaG022494	MsaG046546	0.828273	1.762182e-54	4.855938e-52
MsaG022806	MsaG046546	0.802356	9.797184e-49	1.397313e-46
MsaG023133	MsaG046546	0.851478	1.652782e-60	9.426690e-58
MsaG023396	MsaG046546	0.845262	8.501956e-59	3.929175e-56
MsaG023609	MsaG046546	0.890929	1.394004e-73	4.311191e-70
MsaG023787	MsaG046546	0.873405	3.103759e-67	4.161873e-64
MsaG023974	MsaG046546	0.801155	1.723443e-48	2.391702e-46
MsaG024998	MsaG046546	0.806059	1.674316e-49	2.601958e-47
MsaG025290	MsaG046546	0.811984	9.146168e-51	1.639588e-48
MsaG025428	MsaG046546	0.809015	3.975798e-50	6.630167e-48
MsaG025722	MsaG046546	0.825144	9.759823e-54	2.464788e-51
MsaG027027	MsaG046546	0.803215	6.523481e-49	9.489353e-47
MsaG027361	MsaG046546	0.839521	2.781762e-57	1.069682e-54
MsaG027416	MsaG046546	0.815957	1.228262e-51	2.432620e-49
MsaG027569	MsaG046546	0.834350	5.735332e-56	1.884202e-53
MsaG027618	MsaG046546	0.828301	1.735583e-54	4.786367e-52
MsaG027774	MsaG046546	0.827911	2.152010e-54	5.870354e-52
MsaG027749	MsaG046546	0.860890	2.967056e-63	2.386381e-60
MsaG027862	MsaG046546	0.884038	5.782790e-71	1.264274e-67
MsaG027966	MsaG046546	0.850164	3.859689e-60	2.103400e-57
MsaG028246	MsaG046546	0.869437	6.288532e-66	7.117420e-63
MsaG028339	MsaG046546	0.802566	8.868901e-49	1.271033e-46
MsaG028530	MsaG046546	0.801289	1.618379e-48	2.252740e-46
MsaG028713	MsaG046546	0.845706	6.451372e-59	3.026019e-56
MsaG028951	MsaG046546	0.834384	5.622681e-56	1.849078e-53
MsaG029232	MsaG046546	0.816703	8.379120e-52	1.691427e-49
MsaG029481	MsaG046546	0.840181	1.875481e-57	7.363045e-55
MsaG029548	MsaG046546	0.808835	4.342931e-50	7.211108e-48
MsaG029600	MsaG046546	0.815485	1.562600e-51	3.057865e-49
MsaG029773	MsaG046546	0.814163	3.059581e-51	5.791099e-49
MsaG029763	MsaG046546	0.877265	1.507458e-68	2.399024e-65
MsaG029887	MsaG046546	0.850224	3.713689e-60	2.027981e-57
MsaG029987	MsaG046546	0.837851	7.476557e-57	2.729471e-54
MsaG030158	MsaG046546	0.821811	5.822895e-53	1.343559e-50
MsaG030359	MsaG046546	0.800908	1.934430e-48	2.669577e-46
MsaG030905	MsaG046546	0.811884	9.612889e-51	1.719060e-48
MsaG030955	MsaG046546	0.912329	5.402717e-83	5.945039e-79
MsaG030986	MsaG046546	0.869369	6.614048e-66	7.464406e-63
MsaG032101	MsaG046546	0.825254	9.198455e-54	2.330000e-51
MsaG032294	MsaG046546	0.857671	2.714167e-62	1.933260e-59
MsaG032332	MsaG046546	0.824130	1.687497e-53	4.145335e-51
MsaG032448	MsaG046546	0.848459	1.145098e-59	5.888277e-57
MsaG032786	MsaG046546	0.814748	2.274434e-51	4.368761e-49
MsaG033134	MsaG046546	0.813228	4.902424e-51	9.064550e-49
MsaG033298	MsaG046546	0.859212	9.474574e-63	7.149355e-60
MsaG033400	MsaG046546	0.884175	5.150346e-71	1.133348e-67
MsaG033519	MsaG046546	0.819529	1.937133e-52	4.207557e-50
MsaG033596	MsaG046546	0.878740	4.616243e-69	7.861683e-66
MsaG033694	MsaG046546	0.883582	8.501725e-71	1.818414e-67
MsaG033796	MsaG046546	0.812727	6.304602e-51	1.151203e-48
MsaG034132	MsaG046546	0.871459	1.374653e-66	1.694678e-63
MsaG034444	MsaG046546	0.814209	2.989180e-51	5.664492e-49
MsaG034875	MsaG046546	0.875138	8.083388e-68	1.169606e-64
MsaG035054	MsaG046546	0.802405	9.569465e-49	1.366392e-46
MsaG035190	MsaG046546	0.830787	4.344452e-55	1.285922e-52
MsaG035148	MsaG046546	0.805387	2.313532e-49	3.539097e-47
MsaG035465	MsaG046546	0.811119	1.407087e-50	2.469416e-48
MsaG035439	MsaG046546	0.803304	6.255739e-49	9.118351e-47
MsaG035660	MsaG046546	0.822887	3.285331e-53	7.803040e-51
MsaG035935	MsaG046546	0.804864	2.973353e-49	4.493625e-47
MsaG036047	MsaG046546	0.847416	2.214284e-59	1.099557e-56
MsaG036056	MsaG046546	0.824357	1.493057e-53	3.690566e-51
MsaG039160	MsaG046546	0.836846	1.348670e-56	4.775044e-54
MsaG039196	MsaG046546	0.836829	1.361831e-56	4.819277e-54
MsaG039679	MsaG046546	0.802242	1.033709e-48	1.470400e-46
MsaG039932	MsaG046546	0.863701	4.103393e-64	3.681606e-61
MsaG039995	MsaG046546	0.809544	3.065920e-50	5.178481e-48
MsaG040546	MsaG046546	0.801746	1.305528e-48	1.836251e-46
MsaG040679	MsaG046546	0.827662	2.468513e-54	6.686750e-52
MsaG040682	MsaG046546	0.800570	2.266237e-48	3.103813e-46
MsaG040909	MsaG046546	0.807840	7.062782e-50	1.144954e-47
MsaG041335	MsaG046546	0.809268	3.511479e-50	5.891304e-48

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG046546	MtrunA17_Chr4g0076771	99.611	257	0	1	1	257	1	256	0.0	532
MsaG046546	MtrunA17_Chr8g0343441	71.311	244	70	0	10	253	9	252	3.42e-111	320
MsaG046546	MtrunA17_Chr1g0150821	67.589	253	75	2	10	255	10	262	2.98e-105	305
MsaG046546	MtrunA17_Chr2g0300241	68.548	248	69	4	10	255	12	252	1.77e-104	303
MsaG046546	MtrunA17_Chr2g0329821	67.194	253	77	2	1	253	1	247	2.56e-103	300
MsaG046546	MtrunA17_Chr7g0242511	62.302	252	84	5	4	255	1	241	1.36e-93	275
MsaG046546	MtrunA17_Chr4g0006381	61.508	252	86	5	4	255	1	241	2.78e-90	267

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG046546	AT2G02470.1	79.151	259	46	5	1	255	1	255	3.52e-130	369
MsaG046546	AT1G14510.1	78.656	253	49	3	1	253	1	248	5.26e-128	363
MsaG046546	AT2G02470.2	76.744	258	45	5	1	255	1	246	4.40e-124	353
MsaG046546	AT5G20510.1	67.568	259	80	3	1	255	1	259	8.81e-112	322
MsaG046546	AT3G42790.1	66.275	255	80	3	1	255	1	249	1.06e-108	314
MsaG046546	AT5G05610.2	63.347	251	79	5	5	255	3	240	1.73e-95	280
MsaG046546	AT5G05610.1	63.347	251	79	5	5	255	3	240	1.73e-95	280
MsaG046546	AT5G26210.1	67.331	251	72	3	10	255	9	254	5.23e-93	275
MsaG046546	AT3G11200.1	63.137	255	84	4	1	255	1	245	7.65e-89	263
MsaG046546	AT5G20510.2	66.512	215	68	3	45	255	4	218	5.70e-86	255
MsaG046546	AT2G02470.3	82.927	164	24	3	1	164	1	160	2.71e-85	255
MsaG046546	AT5G20510.3	73.171	164	42	2	1	162	1	164	2.97e-75	227
MsaG046546	AT3G11200.2	62.844	218	71	4	38	255	25	232	6.78e-75	228

Find 75 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CTCGCTGTTGCTTTCTATTT+TGG	0.091188	8:+85697666	MsaT046546.1:CDS
AAGGAGAATTTGTGCCTCTA+TGG	0.272744	8:+85697492	MsaT046546.1:CDS
GTTCAGAGCTATCCAATTCT+TGG	0.273239	8:-85699953	None:intergenic
ATTATGGCACCGATGAATTC+TGG	0.291624	8:+85699819	MsaT046546.1:CDS
TTCACTTCCCATGTTTCATT+TGG	0.302703	8:-85697519	None:intergenic
TTTGGTGCCCGCTTTGGATT+TGG	0.319624	8:+85697684	MsaT046546.1:CDS
TTGGATTTGGTAAGAATGAT+AGG	0.350809	8:+85697697	MsaT046546.1:CDS
TCTTCAACAGTTCGAGGTAC+TGG	0.366061	8:-85696574	None:intergenic
ACATCTTCACACCCTTGGTC+TGG	0.386000	8:-85699706	None:intergenic
TCAGGAGGCACTTCCTCAAC+AGG	0.419078	8:-85697546	None:intergenic
ACAGTCTTTGAGCTTGCAAC+AGG	0.426181	8:+85699489	MsaT046546.1:CDS
GGTGCTTGTGGTGATAATTA+TGG	0.428882	8:+85699803	MsaT046546.1:CDS
CATTGGGTATAAACTTTGCT+CGG	0.446703	8:+85697583	MsaT046546.1:CDS
AGTATCAAGAAGCCAAGAAT+TGG	0.452358	8:+85699941	MsaT046546.1:CDS
AAAACTTCTTCAACAGTTCG+AGG	0.455840	8:-85696580	None:intergenic
AATGCTGGCTCGGGAAGTTC+AGG	0.456279	8:-85697564	None:intergenic
CTGTCAACCTCTTCTTTGAC+CGG	0.460633	8:-85699734	None:intergenic
GGCTTCTTGATACTGCAGCC+AGG	0.465655	8:-85699932	None:intergenic
TGAACTTCCCGAGCCAGCAT+TGG	0.471886	8:+85697566	MsaT046546.1:CDS
GTTTATACCCAATGCTGGCT+CGG	0.475497	8:-85697574	None:intergenic
CTTTGCTCGGGATGGAATGC+AGG	0.478727	8:+85697596	MsaT046546.1:CDS
GGTTGACAGTGGAGAAGAAG+AGG	0.483798	8:+85699748	MsaT046546.1:CDS
TGCAGACATCTTCACACCCT+TGG	0.486335	8:-85699711	None:intergenic
CATCTTCACACCCTTGGTCT+GGG	0.494259	8:-85699705	None:intergenic
AGGAGAATTTGTGCCTCTAT+GGG	0.495200	8:+85697493	MsaT046546.1:CDS
GAACTTCCCGAGCCAGCATT+GGG	0.495975	8:+85697567	MsaT046546.1:CDS
TTGATGTGTTCAGCCTTGGC+AGG	0.497341	8:-85699896	None:intergenic
CTTCAACAGTTCGAGGTACT+GGG	0.497593	8:-85696573	None:intergenic
TTGATCAAAGCTCTCACTAC+TGG	0.498155	8:+85696631	MsaT046546.1:CDS
GGTATAAACTTTGCTCGGGA+TGG	0.501826	8:+85697588	MsaT046546.1:CDS
TTGCTTGATGTGTTCAGCCT+TGG	0.502589	8:-85699900	None:intergenic
TTTATACCCAATGCTGGCTC+GGG	0.504159	8:-85697573	None:intergenic
ATTGGGTATAAACTTTGCTC+GGG	0.520391	8:+85697584	MsaT046546.1:CDS
AGTGAGAGCTTTGATCAAAC+CGG	0.520678	8:-85696626	None:intergenic
CATTGTTGTGAGCAGTCAGT+TGG	0.529254	8:-85699533	None:intergenic
GCTTCTTGATACTGCAGCCA+GGG	0.530817	8:-85699931	None:intergenic
ACTAACCGGGATCGCAGAGC+TGG	0.531212	8:-85696767	None:intergenic
AAATTGAAATTGAGGATGGA+AGG	0.531943	8:+85696538	None:intergenic
GAAATTGAGGATGGAAGGAA+TGG	0.537738	8:+85696543	None:intergenic
CCTTGGTCTGGGATTCAGAC+TGG	0.538724	8:-85699694	None:intergenic
TTGCAGTTCACAGTGACTCA+TGG	0.543636	8:+85697640	MsaT046546.1:CDS
GTTGTGATATGTGCGAGAAA+TGG	0.560529	8:+85699846	MsaT046546.1:CDS
TTTCATTTGGAAACCCATAG+AGG	0.561848	8:-85697506	None:intergenic
GCAAAGTTTATACCCAATGC+TGG	0.563847	8:-85697579	None:intergenic
GGAGAAGGACTGGTTATCAC+TGG	0.565404	8:+85697617	MsaT046546.1:CDS
TCGGGATGGAATGCAGGAGA+AGG	0.567649	8:+85697602	MsaT046546.1:CDS
ATGGGTTTCCAAATGAAACA+TGG	0.572525	8:+85697511	MsaT046546.1:CDS
ATTATCACCACAAGCACCAC+AGG	0.573675	8:-85699798	None:intergenic
ATCAAGCAATACAAGTGCCC+TGG	0.578416	8:+85699914	MsaT046546.1:CDS
GGTCTGGGATTCAGACTGGC+GGG	0.580455	8:-85699690	None:intergenic
TGTTAAAATTACTCCTGCCA+AGG	0.581201	8:+85699883	MsaT046546.1:CDS
ATGGAATGCAGGAGAAGGAC+TGG	0.581252	8:+85697607	MsaT046546.1:CDS
CAAATACAAATCAAGTGGAA+AGG	0.584281	8:+85699566	MsaT046546.1:CDS
TGTTGCAAGCTCAAAGACTG+TGG	0.590482	8:-85699487	None:intergenic
ATTCTTACCAAATCCAAAGC+GGG	0.591224	8:-85697691	None:intergenic
AATAGCAAATACAAATCAAG+TGG	0.591787	8:+85699561	MsaT046546.1:CDS
GTCTGCACCGGTCAAAGAAG+AGG	0.597402	8:+85699727	MsaT046546.1:CDS
TGGTCTGGGATTCAGACTGG+CGG	0.601563	8:-85699691	None:intergenic
GGGTGTGAAGATGTCTGCAC+CGG	0.601595	8:+85699715	MsaT046546.1:CDS
TGGGTTTCCAAATGAAACAT+GGG	0.604798	8:+85697512	MsaT046546.1:CDS
GATTACAAAGGCAGACGCGC+CGG	0.610248	8:+85696607	MsaT046546.1:CDS
GGTGCAACCTGTGGTGCTTG+TGG	0.611921	8:+85699791	MsaT046546.1:CDS
GTTGCAAGCTCAAAGACTGT+GGG	0.616342	8:-85699486	None:intergenic
GGAAGTGAACTTGCCTGTTG+AGG	0.623158	8:+85697533	MsaT046546.1:CDS
AGGAACTGCTAAGCAATCAA+AGG	0.625294	8:+85699509	MsaT046546.1:CDS
ATGTGCGAGAAATGGTTCCA+TGG	0.628526	8:+85699854	MsaT046546.1:CDS
CAGTCTGAATCCCAGACCAA+GGG	0.635249	8:+85699695	MsaT046546.1:CDS
ACAACAGATCCAGAATTCAT+CGG	0.639218	8:-85699828	None:intergenic
CCAGTCTGAATCCCAGACCA+AGG	0.643258	8:+85699694	MsaT046546.1:CDS
CAACTGACTGCTCACAACAA+TGG	0.646947	8:+85699534	MsaT046546.1:CDS
GCTGGCTCGGGAAGTTCAGG+AGG	0.654216	8:-85697561	None:intergenic
GTCAAAGAAGAGGTTGACAG+TGG	0.669063	8:+85699737	MsaT046546.1:CDS
GAAGAAGATGATGATGAACA+AGG	0.695245	8:+85699770	MsaT046546.1:CDS
GATGAACAAGGTGCAACCTG+TGG	0.715909	8:+85699782	MsaT046546.1:CDS
CATTCTTACCAAATCCAAAG+CGG	0.722080	8:-85697692	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content

Chromosome	Type	Strat	End	Strand	Name
Chr8	gene	85696553	85699967	85696553	ID=MsaG046546
Chr8	mRNA	85696553	85699967	85696553	ID=MsaT046546.1;Parent=MsaG046546
Chr8	exon	85696553	85696652	85696553	ID=MsaT046546.1.exon1;Parent=MsaT046546.1
Chr8	CDS	85696553	85696652	85696553	ID=cds.MsaT046546.1;Parent=MsaT046546.1
Chr8	exon	85696751	85696783	85696751	ID=MsaT046546.1.exon2;Parent=MsaT046546.1
Chr8	CDS	85696751	85696783	85696751	ID=cds.MsaT046546.1;Parent=MsaT046546.1
Chr8	exon	85697490	85697718	85697490	ID=MsaT046546.1.exon3;Parent=MsaT046546.1
Chr8	CDS	85697490	85697718	85697490	ID=cds.MsaT046546.1;Parent=MsaT046546.1
Chr8	exon	85699455	85699587	85699455	ID=MsaT046546.1.exon4;Parent=MsaT046546.1
Chr8	CDS	85699455	85699587	85699455	ID=cds.MsaT046546.1;Parent=MsaT046546.1
Chr8	exon	85699689	85699967	85699689	ID=MsaT046546.1.exon5;Parent=MsaT046546.1
Chr8	CDS	85699689	85699967	85699689	ID=cds.MsaT046546.1;Parent=MsaT046546.1

Gene Sequence

>MsaT046546.1

ATGGAAGGAATGGCACAGCACCCAGTACCTCGAACTGTTGAAGAAGTTTTTAGCGATTACAAAGGCAGACGCGCCGGTTTGATCAAAGCTCTCACTACTGACGTTGAAAAGTTTTACCAGCTCTGCGATCCCGAAAAGGAGAATTTGTGCCTCTATGGGTTTCCAAATGAAACATGGGAAGTGAACTTGCCTGTTGAGGAAGTGCCTCCTGAACTTCCCGAGCCAGCATTGGGTATAAACTTTGCTCGGGATGGAATGCAGGAGAAGGACTGGTTATCACTGGTTGCAGTTCACAGTGACTCATGGCTGCTCGCTGTTGCTTTCTATTTTGGTGCCCGCTTTGGATTTGGTAAGAATGATAGGAAAAGGCTTTTTCAGATGATAAATGATCTGCCCACAGTCTTTGAGCTTGCAACAGGAACTGCTAAGCAATCAAAGGACCAACTGACTGCTCACAACAATGGTAGCAATAGCAAATACAAATCAAGTGGAAAGTCCCGCCAGTCTGAATCCCAGACCAAGGGTGTGAAGATGTCTGCACCGGTCAAAGAAGAGGTTGACAGTGGAGAAGAAGAGGAAGAAGATGATGATGAACAAGGTGCAACCTGTGGTGCTTGTGGTGATAATTATGGCACCGATGAATTCTGGATCTGTTGTGATATGTGCGAGAAATGGTTCCATGGTAAATGTGTTAAAATTACTCCTGCCAAGGCTGAACACATCAAGCAATACAAGTGCCCTGGCTGCAGTATCAAGAAGCCAAGAATTGGATAG

Protein sequence

>MsaT046546.1

MEGMAQHPVPRTVEEVFSDYKGRRAGLIKALTTDVEKFYQLCDPEKENLCLYGFPNETWEVNLPVEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDSWLLAVAFYFGARFGFGKNDRKRLFQMINDLPTVFELATGTAKQSKDQLTAHNNGSNSKYKSSGKSRQSESQTKGVKMSAPVKEEVDSGEEEEEDDDEQGATCGACGDNYGTDEFWICCDMCEKWFHGKCVKITPAKAEHIKQYKCPGCSIKKPRIG*