AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa ssp. caerulea / MsaG046774

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG046774 MtrunA17_Chr5g0441131 69.118 204 41 3 2 204 3 185 9.56e-83 248
MsaG046774 MtrunA17_Chr5g0440761 57.676 241 75 7 12 235 13 243 1.29e-79 243
MsaG046774 MtrunA17_Chr5g0441141 53.676 272 92 9 12 258 13 275 3.82e-78 239
MsaG046774 MtrunA17_Chr5g0440781 63.731 193 54 5 12 204 13 189 1.41e-74 227
MsaG046774 MtrunA17_Chr1g0193901 91.753 97 8 0 1 97 1 97 7.35e-48 156
MsaG046774 MtrunA17_Chr1g0193891 91.753 97 8 0 1 97 1 97 7.35e-48 156
MsaG046774 MtrunA17_Chr1g0193871 91.753 97 8 0 1 97 1 97 7.35e-48 156
MsaG046774 MtrunA17_Chr1g0193881 91.753 97 8 0 1 97 1 97 7.35e-48 156
MsaG046774 MtrunA17_Chr1g0154031 46.512 172 83 5 11 178 76 242 3.01e-39 143
MsaG046774 MtrunA17_Chr1g0192411 45.503 189 95 5 10 192 11 197 3.46e-38 140
MsaG046774 MtrunA17_Chr8g0354661 40.500 200 102 7 11 196 37 233 6.94e-38 141
MsaG046774 MtrunA17_Chr3g0099131 55.833 120 51 2 11 130 41 158 1.10e-37 140
MsaG046774 MtrunA17_Chr5g0425591 74.118 85 21 1 12 96 10 93 2.55e-37 129
MsaG046774 MtrunA17_Chr4g0048511 52.893 121 54 3 8 127 10 128 1.45e-35 132
MsaG046774 MtrunA17_Chr3g0080861 50.833 120 57 2 11 130 37 154 2.91e-35 134
MsaG046774 MtrunA17_Chr2g0281071 54.701 117 50 3 8 123 10 124 4.35e-35 130
MsaG046774 MtrunA17_Chr2g0322521 56.522 115 48 2 11 125 29 141 7.97e-35 130
MsaG046774 MtrunA17_Chr2g0323411 54.386 114 49 3 11 123 12 123 1.46e-34 128
MsaG046774 MtrunA17_Chr1g0151941 34.862 218 121 7 9 213 10 219 1.78e-33 124
MsaG046774 MtrunA17_Chr4g0032401 54.128 109 48 2 7 115 13 119 2.50e-33 125
MsaG046774 MtrunA17_Chr1g0193371 50.413 121 57 3 4 123 5 123 3.74e-33 125
MsaG046774 MtrunA17_Chr5g0410961 56.190 105 44 2 11 115 12 114 6.53e-33 124
MsaG046774 MtrunA17_Chr5g0395281 40.860 186 91 7 11 190 12 184 8.18e-33 123
MsaG046774 MtrunA17_Chr7g0270891 43.750 160 84 5 4 161 5 160 8.48e-33 124
MsaG046774 MtrunA17_Chr1g0187761 53.333 105 47 2 11 115 12 114 1.27e-32 121
MsaG046774 MtrunA17_Chr7g0274581 42.857 140 70 3 11 142 12 149 3.24e-32 119
MsaG046774 MtrunA17_Chr3g0115821 50.435 115 54 3 11 124 12 124 5.34e-32 122
MsaG046774 MtrunA17_Chr2g0328771 53.333 105 47 2 11 115 20 122 8.21e-32 120
MsaG046774 MtrunA17_Chr1g0193801 49.587 121 58 3 4 123 5 123 9.09e-32 122
MsaG046774 MtrunA17_Chr3g0117091 48.031 127 58 4 9 129 10 134 9.24e-32 121
MsaG046774 MtrunA17_Chr4g0039971 51.304 115 53 3 11 124 13 125 1.08e-31 121
MsaG046774 MtrunA17_Chr7g0271241 53.271 107 48 2 4 110 5 109 1.24e-31 122
MsaG046774 MtrunA17_Chr1g0211161 47.934 121 60 3 4 123 6 124 1.55e-31 118
MsaG046774 MtrunA17_Chr1g0203411 46.847 111 57 2 11 121 12 120 2.49e-31 119
MsaG046774 MtrunA17_Chr4g0068061 40.964 166 84 5 11 164 12 175 3.06e-31 120
MsaG046774 MtrunA17_Chr3g0088461 50.000 110 53 2 6 115 17 124 3.06e-31 120
MsaG046774 MtrunA17_Chr1g0167691 50.000 108 52 2 9 116 10 115 3.19e-31 117
MsaG046774 MtrunA17_Chr4g0022901 42.647 136 69 3 11 146 13 139 4.73e-31 117
MsaG046774 MtrunA17_Chr6g0453751 62.245 98 28 2 7 96 16 112 5.50e-31 113
MsaG046774 MtrunA17_Chr3g0103281 49.565 115 55 3 11 124 12 124 6.10e-31 119
MsaG046774 MtrunA17_Chr4g0058631 47.107 121 61 3 4 123 5 123 6.71e-31 119
MsaG046774 MtrunA17_Chr2g0309911 42.958 142 73 4 1 141 1 135 1.02e-30 118
MsaG046774 MtrunA17_Chr8g0342521 47.934 121 60 3 4 123 5 123 2.17e-30 117
MsaG046774 MtrunA17_Chr8g0385321 50.926 108 51 2 17 123 17 123 2.30e-30 117
MsaG046774 MtrunA17_Chr4g0022931 46.789 109 56 2 11 119 13 119 2.37e-30 115
MsaG046774 MtrunA17_Chr2g0323351 50.476 105 50 2 11 115 12 114 3.00e-30 115
MsaG046774 MtrunA17_Chr1g0167661 50.467 107 51 2 9 115 10 114 3.06e-30 115
MsaG046774 MtrunA17_Chr8g0387421 46.957 115 59 2 4 118 5 117 5.25e-30 116
MsaG046774 MtrunA17_Chr4g0042671 47.368 114 57 3 11 123 12 123 6.25e-30 117
MsaG046774 MtrunA17_Chr1g0152011 52.830 106 47 3 11 115 12 115 7.05e-30 116
MsaG046774 MtrunA17_Chr4g0022911 42.029 138 76 3 11 146 13 148 7.86e-30 115
MsaG046774 MtrunA17_Chr2g0330041 46.281 121 62 3 4 123 5 123 7.99e-30 117
MsaG046774 MtrunA17_Chr4g0037141 49.074 108 53 2 17 123 17 123 8.28e-30 114
MsaG046774 MtrunA17_Chr5g0397231 48.148 108 54 2 4 111 5 110 8.62e-30 115
MsaG046774 MtrunA17_Chr6g0450101 46.218 119 62 2 11 129 14 130 1.00e-29 112
MsaG046774 MtrunA17_Chr8g0342541 47.321 112 57 2 4 115 5 114 1.15e-29 115
MsaG046774 MtrunA17_Chr5g0400821 51.887 106 48 3 11 115 12 115 1.23e-29 115
MsaG046774 MtrunA17_Chr7g0228231 49.057 106 52 2 11 116 14 117 1.28e-29 112
MsaG046774 MtrunA17_Chr7g0217741 46.087 115 59 3 11 124 12 124 1.31e-29 115
MsaG046774 MtrunA17_Chr1g0209661 36.041 197 115 6 11 207 27 212 2.23e-29 114
MsaG046774 MtrunA17_Chr3g0131121 49.074 108 53 2 17 123 17 123 2.29e-29 114
MsaG046774 MtrunA17_Chr4g0022881 50.000 104 50 2 12 115 13 114 2.35e-29 112
MsaG046774 MtrunA17_Chr6g0452271 48.696 115 56 3 11 124 12 124 2.45e-29 114
MsaG046774 MtrunA17_Chr3g0135311 44.056 143 73 4 11 148 12 152 3.27e-29 114
MsaG046774 MtrunA17_Chr1g0194301 47.706 109 55 2 11 119 33 139 3.49e-29 113
MsaG046774 MtrunA17_Chr6g0453471 41.304 138 75 4 11 144 12 147 3.58e-29 114
MsaG046774 MtrunA17_Chr5g0435101 37.821 156 89 5 1 152 1 152 3.68e-29 111
MsaG046774 MtrunA17_Chr2g0327351 53.922 102 44 3 11 111 12 111 5.08e-29 113
MsaG046774 MtrunA17_Chr4g0054391 53.465 101 44 3 11 110 12 110 5.58e-29 112
MsaG046774 MtrunA17_Chr4g0028311 51.887 106 48 3 11 115 12 115 6.24e-29 113
MsaG046774 MtrunA17_Chr4g0072451 43.750 160 41 6 1 158 1 113 6.94e-29 108
MsaG046774 MtrunA17_Chr4g0070611 34.241 257 145 11 11 254 12 257 8.37e-29 112
MsaG046774 MtrunA17_Chr7g0264641 45.038 131 66 4 11 137 12 140 8.48e-29 112
MsaG046774 MtrunA17_Chr7g0254411 49.524 105 51 2 11 115 12 114 1.29e-28 112
MsaG046774 MtrunA17_Chr6g0453211 50.495 101 48 2 11 111 12 110 1.45e-28 112
MsaG046774 MtrunA17_Chr8g0349261 48.598 107 52 3 11 116 13 117 1.54e-28 111
MsaG046774 MtrunA17_Chr4g0060721 50.000 106 50 3 11 115 13 116 2.17e-28 112
MsaG046774 MtrunA17_Chr8g0343831 49.515 103 50 2 9 111 6 106 2.67e-28 110
MsaG046774 MtrunA17_Chr1g0186061 46.429 112 58 2 4 115 13 122 4.17e-28 109
MsaG046774 MtrunA17_Chr1g0203441 49.541 109 53 2 7 115 9 115 5.92e-28 109
MsaG046774 MtrunA17_Chr3g0092401 48.571 105 52 2 11 115 13 115 6.46e-28 110
MsaG046774 MtrunA17_Chr7g0217221 38.365 159 92 4 11 167 12 166 6.49e-28 109
MsaG046774 MtrunA17_Chr4g0070641 48.421 95 48 1 17 111 17 110 6.55e-28 106
MsaG046774 MtrunA17_Chr1g0194951 49.505 101 49 2 11 111 12 110 8.47e-28 111
MsaG046774 MtrunA17_Chr4g0055981 44.248 113 61 2 7 119 51 161 1.04e-27 107
MsaG046774 MtrunA17_Chr8g0346561 49.505 101 49 2 11 111 12 110 1.13e-27 109
MsaG046774 MtrunA17_Chr7g0261281 47.619 105 53 2 11 115 12 114 1.15e-27 108
MsaG046774 MtrunA17_Chr7g0275911 46.316 95 50 1 17 111 17 110 1.55e-27 108
MsaG046774 MtrunA17_Chr3g0121241 45.614 114 59 3 11 123 42 153 2.03e-27 108
MsaG046774 MtrunA17_Chr4g0072751 50.980 102 47 3 11 111 12 111 2.72e-27 109
MsaG046774 MtrunA17_Chr6g0470971 47.321 112 57 2 6 117 9 118 3.42e-27 107
MsaG046774 MtrunA17_Chr6g0487491 44.538 119 57 3 10 120 11 128 5.00e-27 107
MsaG046774 MtrunA17_Chr4g0013361 39.884 173 92 7 11 179 10 174 5.67e-27 107
MsaG046774 MtrunA17_Chr2g0311221 51.961 102 47 2 10 111 13 112 1.47e-26 107
MsaG046774 MtrunA17_Chr4g0022891 47.525 101 51 2 11 111 12 110 1.86e-26 104
MsaG046774 MtrunA17_Chr1g0168661 47.475 99 51 1 17 115 26 123 2.42e-26 105
MsaG046774 MtrunA17_Chr7g0228891 46.087 115 59 3 11 124 12 124 3.90e-26 104
MsaG046774 MtrunA17_Chr5g0434571 46.087 115 59 3 11 124 48 160 3.94e-26 106
MsaG046774 MtrunA17_Chr1g0180391 48.113 106 53 2 11 116 19 122 4.28e-26 103
MsaG046774 MtrunA17_Chr8g0342481 45.133 113 59 3 4 115 5 115 4.34e-26 107
MsaG046774 MtrunA17_Chr3g0110351 46.087 115 59 3 11 124 12 124 4.85e-26 105
MsaG046774 MtrunA17_Chr1g0194291 43.119 109 60 2 11 119 21 127 7.10e-26 103
MsaG046774 MtrunA17_Chr4g0044421 46.602 103 53 2 13 115 14 114 1.36e-25 101
MsaG046774 MtrunA17_Chr7g0240821 45.918 98 52 1 14 111 3 99 1.50e-25 102
MsaG046774 MtrunA17_Chr4g0057031 44.348 115 61 3 11 124 12 124 1.97e-25 102
MsaG046774 MtrunA17_Chr7g0269831 52.475 101 46 2 11 111 12 110 2.23e-25 104
MsaG046774 MtrunA17_Chr3g0099141 58.333 84 33 2 11 94 40 121 4.17e-25 98.6
MsaG046774 MtrunA17_Chr5g0417821 45.614 114 59 3 11 123 7 118 6.91e-25 101
MsaG046774 MtrunA17_Chr8g0334881 45.872 109 56 3 11 118 10 116 1.82e-24 101
MsaG046774 MtrunA17_Chr2g0293911 44.954 109 58 2 11 119 24 130 3.72e-24 100
MsaG046774 MtrunA17_Chr5g0434931 41.905 105 59 2 11 115 35 137 1.69e-23 97.8
MsaG046774 MtrunA17_Chr4g0068921 44.762 105 56 2 11 115 24 126 4.80e-23 94.4
MsaG046774 MtrunA17_Chr5g0434841 44.762 105 56 2 11 115 20 122 6.20e-23 97.1
MsaG046774 MtrunA17_Chr5g0434911 41.121 107 61 2 9 115 19 123 1.85e-22 94.7
MsaG046774 MtrunA17_Chr8g0360111 42.574 101 56 2 11 111 25 123 2.52e-22 94.4
MsaG046774 MtrunA17_Chr5g0434831 42.857 105 58 2 11 115 7 109 3.64e-22 92.0
MsaG046774 MtrunA17_Chr2g0327821 41.818 110 62 2 6 115 1 108 5.07e-22 92.8
MsaG046774 MtrunA17_Chr7g0247131 49.383 81 39 2 44 123 10 89 9.40e-22 92.8
MsaG046774 MtrunA17_Chr4g0030881 38.760 129 67 4 5 123 1 127 1.81e-21 91.7
MsaG046774 MtrunA17_Chr6g0454921 46.809 94 48 2 17 110 18 109 2.78e-21 90.1
MsaG046774 MtrunA17_Chr3g0133601 41.509 106 60 2 17 122 40 143 4.12e-21 90.1
MsaG046774 MtrunA17_Chr7g0220341 41.748 103 56 3 11 111 25 125 4.95e-21 90.9
MsaG046774 MtrunA17_Chr5g0401731 47.000 100 50 3 17 115 18 115 5.29e-21 91.7
MsaG046774 MtrunA17_Chr7g0228991 39.252 107 63 2 9 115 27 131 7.39e-21 90.5
MsaG046774 MtrunA17_Chr4g0058991 28.333 240 147 6 17 234 212 448 7.50e-21 92.8
MsaG046774 MtrunA17_Chr2g0323321 46.512 86 45 1 1 86 1 85 1.12e-20 85.9
MsaG046774 MtrunA17_Chr3g0117511 39.516 124 71 3 17 138 186 307 2.95e-20 90.9
MsaG046774 MtrunA17_Chr5g0395221 47.674 86 44 1 1 86 2 86 5.86e-20 82.8
MsaG046774 MtrunA17_Chr4g0042611 48.052 77 39 1 10 86 11 86 8.94e-20 82.4
MsaG046774 MtrunA17_Chr8g0342511 50.633 79 39 0 8 86 8 86 1.49e-19 82.0
MsaG046774 MtrunA17_Chr4g0008551 40.171 117 66 3 17 133 41 153 2.72e-19 87.0
MsaG046774 MtrunA17_Chr5g0429661 41.284 109 61 3 7 115 116 221 3.21e-19 87.0
MsaG046774 MtrunA17_Chr6g0460661 36.522 115 71 2 17 131 19 131 7.98e-19 82.0
MsaG046774 MtrunA17_Chr8g0342531 48.718 78 39 1 4 81 5 81 5.27e-18 80.1
MsaG046774 MtrunA17_Chr6g0480581 40.196 102 56 3 17 115 7 106 1.09e-17 80.9
MsaG046774 MtrunA17_Chr4g0053431 44.000 100 53 3 17 115 8 105 1.16e-17 81.3
MsaG046774 MtrunA17_Chr2g0294811 48.684 76 38 1 11 86 12 86 1.93e-17 77.0
MsaG046774 MtrunA17_Chr7g0228401 36.585 123 52 3 16 114 257 377 6.34e-17 81.3
MsaG046774 MtrunA17_Chr5g0437321 42.105 95 53 2 17 111 22 114 2.05e-16 78.2
MsaG046774 MtrunA17_Chr7g0238631 35.484 155 89 5 6 152 106 257 2.29e-16 79.7
MsaG046774 MtrunA17_Chr7g0238631 34.314 102 64 2 9 110 58 156 1.34e-12 68.2
MsaG046774 MtrunA17_Chr5g0397841 41.905 105 58 3 6 110 103 204 2.59e-16 79.3
MsaG046774 MtrunA17_Chr7g0238651 38.182 110 65 2 11 118 4 112 2.63e-16 78.6
MsaG046774 MtrunA17_Chr8g0342461 46.429 84 43 2 4 86 5 87 3.31e-16 74.3
MsaG046774 MtrunA17_Chr8g0342471 46.429 84 43 2 4 86 5 87 9.16e-16 73.2
MsaG046774 MtrunA17_Chr4g0042501 38.462 104 59 3 17 117 108 209 3.57e-15 75.9
MsaG046774 MtrunA17_Chr1g0157731 37.273 110 66 3 6 115 84 190 4.09e-15 76.3
MsaG046774 MtrunA17_Chr1g0157731 36.449 107 56 3 9 110 35 134 8.21e-14 72.4
MsaG046774 MtrunA17_Chr3g0139671 37.273 110 66 3 6 115 78 184 4.95e-15 75.9
MsaG046774 MtrunA17_Chr3g0139671 37.383 107 55 3 9 110 29 128 3.30e-14 73.6
MsaG046774 MtrunA17_Chr3g0125801 39.423 104 58 3 17 117 19 120 8.60e-15 73.6
MsaG046774 MtrunA17_Chr7g0228531 37.624 101 60 2 17 117 223 320 1.22e-14 74.3
MsaG046774 MtrunA17_Chr5g0417621 37.500 104 60 3 17 117 137 238 1.82e-14 73.6
MsaG046774 MtrunA17_Chr6g0460671 33.588 131 85 2 8 138 93 221 2.45e-14 72.8
MsaG046774 MtrunA17_Chr3g0093811 39.560 91 50 3 37 123 4 93 1.44e-13 69.7
MsaG046774 MtrunA17_Chr7g0229101 45.070 71 38 1 44 114 4 73 1.50e-13 68.6
MsaG046774 MtrunA17_Chr1g0177901 40.659 91 52 2 24 114 4 92 1.69e-13 68.6
MsaG046774 MtrunA17_Chr5g0416341 32.353 136 86 3 7 142 19 148 2.84e-13 70.1
MsaG046774 MtrunA17_Chr7g0229131 41.667 72 41 1 44 115 4 74 3.16e-13 67.0
MsaG046774 MtrunA17_Chr7g0254261 36.111 108 67 2 17 124 92 197 4.79e-13 68.9
MsaG046774 MtrunA17_Chr7g0228481 37.755 98 58 2 17 114 223 317 7.72e-13 68.9
MsaG046774 MtrunA17_Chr5g0434901 40.580 69 40 1 46 114 7 74 2.96e-12 62.8
MsaG046774 MtrunA17_Chr8g0362231 30.435 115 78 2 7 121 15 127 2.29e-11 64.3
MsaG046774 MtrunA17_Chr7g0233061 43.077 65 36 1 50 114 213 276 5.37e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG046774 AT2G26960.1 47.170 159 72 5 9 157 18 174 4.53e-38 140
MsaG046774 AT2G32460.2 43.750 160 79 3 6 165 1 149 1.56e-37 140
MsaG046774 AT2G32460.1 42.683 164 83 3 2 165 9 161 2.09e-37 139
MsaG046774 AT5G06100.1 54.167 120 53 2 11 130 32 149 2.09e-37 139
MsaG046774 AT5G55020.1 53.390 118 53 2 11 128 26 141 3.31e-37 139
MsaG046774 AT5G06100.5 54.167 120 53 2 11 130 32 149 5.20e-37 139
MsaG046774 AT5G06100.2 54.167 120 53 2 11 130 32 149 5.20e-37 139
MsaG046774 AT5G06100.3 54.167 120 53 2 11 130 32 149 5.20e-37 139
MsaG046774 AT5G06100.4 54.167 120 53 2 11 130 32 149 5.20e-37 139
MsaG046774 AT3G11440.2 53.279 122 55 2 11 132 41 160 5.53e-37 138
MsaG046774 AT3G11440.3 53.279 122 55 2 11 132 41 160 1.56e-36 138
MsaG046774 AT3G11440.4 53.279 122 55 2 11 132 41 160 1.56e-36 138
MsaG046774 AT3G11440.1 53.279 122 55 2 11 132 41 160 1.56e-36 138
MsaG046774 AT4G26930.1 53.043 115 52 2 11 125 19 131 3.28e-36 134
MsaG046774 AT4G21440.1 36.170 235 140 7 11 242 12 239 6.46e-36 133
MsaG046774 AT2G26950.1 50.000 124 61 1 5 128 9 131 1.65e-34 130
MsaG046774 AT5G26660.1 47.794 136 68 3 4 138 5 138 1.92e-34 129
MsaG046774 AT5G54230.1 51.754 114 52 3 11 123 12 123 2.18e-33 125
MsaG046774 AT4G28110.1 53.509 114 50 3 11 123 12 123 3.01e-33 124
MsaG046774 AT4G01680.3 47.619 126 63 3 4 128 5 128 5.58e-33 122
MsaG046774 AT4G05100.1 53.509 114 50 3 11 123 13 124 5.71e-33 124
MsaG046774 AT1G57560.2 50.000 122 58 3 4 124 5 124 1.49e-32 122
MsaG046774 AT1G57560.1 50.000 122 58 3 4 124 5 124 2.81e-32 122
MsaG046774 AT4G01680.1 49.180 122 59 3 4 124 5 124 4.79e-32 122
MsaG046774 AT5G16770.4 52.381 105 48 2 11 115 12 114 9.54e-32 121
MsaG046774 AT5G16770.3 52.381 105 48 2 11 115 12 114 9.54e-32 121
MsaG046774 AT5G16770.1 52.381 105 48 2 11 115 12 114 1.97e-31 120
MsaG046774 AT5G16770.2 52.381 105 48 2 11 115 12 114 1.97e-31 120
MsaG046774 AT3G61250.1 48.246 114 56 3 11 123 12 123 2.16e-31 119
MsaG046774 AT1G09540.1 49.587 121 58 3 4 123 5 123 2.21e-31 121
MsaG046774 AT5G12870.1 49.138 116 57 2 1 116 8 121 2.45e-31 119
MsaG046774 AT3G08500.1 51.887 106 49 2 10 115 29 132 2.83e-31 120
MsaG046774 AT5G10280.1 51.304 115 53 3 11 124 12 124 2.92e-31 120
MsaG046774 AT3G02940.2 52.381 105 48 2 11 115 12 114 5.86e-31 119
MsaG046774 AT3G02940.1 52.381 105 48 2 11 115 12 114 1.35e-30 118
MsaG046774 AT3G02940.3 52.381 105 48 2 11 115 12 114 1.35e-30 118
MsaG046774 AT3G13890.2 48.214 112 56 2 4 115 5 114 1.50e-30 119
MsaG046774 AT1G22640.1 49.123 114 55 3 11 123 12 123 2.22e-30 116
MsaG046774 AT4G38620.1 50.926 108 51 2 17 123 17 123 2.91e-30 116
MsaG046774 AT1G74080.1 37.705 183 86 7 11 169 12 190 3.03e-30 117
MsaG046774 AT4G37780.1 51.887 106 48 3 11 115 12 115 3.08e-30 117
MsaG046774 AT4G09460.1 49.074 108 53 2 17 123 17 123 3.24e-30 115
MsaG046774 AT5G65230.1 51.304 115 53 3 11 124 12 124 3.47e-30 117
MsaG046774 AT5G56110.1 47.826 115 57 3 11 124 12 124 5.60e-30 116
MsaG046774 AT1G34670.1 50.435 115 54 3 11 124 12 124 5.61e-30 117
MsaG046774 AT3G12720.1 46.667 120 61 3 10 128 21 138 6.01e-30 116
MsaG046774 AT1G35515.1 50.000 108 52 2 17 123 17 123 6.65e-30 113
MsaG046774 AT4G17785.2 50.926 108 51 2 8 115 10 115 9.48e-30 116
MsaG046774 AT4G34990.1 49.074 108 53 2 17 123 17 123 9.65e-30 114
MsaG046774 AT4G17785.1 50.926 108 51 2 8 115 10 115 1.02e-29 116
MsaG046774 AT2G31180.1 32.794 247 132 9 11 245 12 236 1.14e-29 114
MsaG046774 AT5G60890.1 34.314 204 118 7 11 200 12 213 1.16e-29 115
MsaG046774 AT1G63910.1 47.826 115 58 2 4 118 5 117 1.19e-29 116
MsaG046774 AT5G15310.4 48.571 105 52 2 11 115 12 114 1.24e-29 114
MsaG046774 AT5G14750.1 50.000 104 50 2 8 111 13 114 1.36e-29 112
MsaG046774 AT3G28470.1 53.465 101 45 2 11 111 12 110 1.41e-29 115
MsaG046774 AT2G16720.1 49.074 108 53 2 17 123 17 123 1.61e-29 114
MsaG046774 AT5G52600.1 41.429 140 70 4 11 140 12 149 1.63e-29 112
MsaG046774 AT3G01140.2 46.087 115 59 3 11 124 12 124 2.76e-29 115
MsaG046774 AT3G01140.1 46.087 115 59 3 11 124 55 167 2.77e-29 115
MsaG046774 AT3G13540.1 44.715 123 65 3 2 123 14 134 4.08e-29 112
MsaG046774 AT5G15310.1 46.087 115 59 3 11 124 12 124 5.13e-29 114
MsaG046774 AT3G01530.1 44.444 117 60 2 4 116 13 128 5.49e-29 110
MsaG046774 AT5G15310.2 46.087 115 59 3 11 124 12 124 6.34e-29 113
MsaG046774 AT3G27810.1 49.057 106 52 2 11 116 20 123 7.43e-29 111
MsaG046774 AT3G49690.1 52.830 106 47 3 11 115 12 115 7.62e-29 113
MsaG046774 AT1G74650.1 48.571 105 52 2 11 115 12 114 7.73e-29 113
MsaG046774 AT3G27920.1 49.074 108 53 2 8 115 11 116 9.21e-29 110
MsaG046774 AT1G18570.1 46.491 114 58 3 11 123 13 124 9.50e-29 114
MsaG046774 AT5G40350.1 48.113 106 53 2 11 116 17 120 9.55e-29 110
MsaG046774 AT4G01680.2 45.113 133 58 4 4 123 5 135 1.01e-28 113
MsaG046774 AT5G62470.2 44.526 137 69 4 11 146 12 142 1.01e-28 114
MsaG046774 AT5G23000.1 50.467 107 50 3 10 115 11 115 1.06e-28 113
MsaG046774 AT1G18710.1 44.348 115 61 3 11 124 12 124 1.18e-28 111
MsaG046774 AT3G23250.1 47.619 105 53 2 11 115 12 114 1.27e-28 112
MsaG046774 AT1G16490.1 50.000 106 51 2 10 115 13 116 1.56e-28 111
MsaG046774 AT1G08810.1 49.524 105 51 2 11 115 12 114 1.63e-28 111
MsaG046774 AT5G40330.1 44.000 125 66 3 12 136 13 133 1.86e-28 110
MsaG046774 AT5G57620.1 50.943 106 49 3 11 115 12 115 2.19e-28 112
MsaG046774 AT1G06180.1 48.624 109 54 2 11 119 12 118 2.69e-28 110
MsaG046774 AT1G56160.1 50.000 106 51 2 10 115 13 116 3.28e-28 111
MsaG046774 AT5G07690.1 48.571 105 52 2 11 115 12 114 3.55e-28 112
MsaG046774 AT1G79180.1 46.610 118 59 3 10 125 13 128 3.92e-28 110
MsaG046774 AT1G48000.1 47.059 102 53 1 17 118 37 137 6.74e-28 108
MsaG046774 AT3G47600.1 47.619 105 53 2 11 115 12 114 7.03e-28 111
MsaG046774 AT2G36890.1 45.690 116 60 3 11 125 12 125 7.15e-28 110
MsaG046774 AT1G74430.1 44.348 115 61 3 11 124 12 124 8.17e-28 109
MsaG046774 AT5G07700.1 47.619 105 53 2 11 115 12 114 9.08e-28 110
MsaG046774 AT5G07700.2 47.619 105 53 2 11 115 12 114 9.08e-28 110
MsaG046774 AT2G36890.2 45.690 116 60 3 11 125 53 166 9.51e-28 110
MsaG046774 AT5G61420.2 45.614 114 59 3 11 123 12 123 9.83e-28 111
MsaG046774 AT5G65790.1 51.887 106 48 3 11 115 12 115 1.05e-27 111
MsaG046774 AT3G13890.1 44.628 121 56 3 4 115 5 123 1.18e-27 111
MsaG046774 AT3G28910.1 48.571 105 52 2 11 115 12 114 1.30e-27 110
MsaG046774 AT3G12820.1 49.057 106 52 2 10 115 13 116 1.30e-27 108
MsaG046774 AT2G47190.1 45.872 109 57 2 11 119 20 126 2.02e-27 108
MsaG046774 AT5G62470.1 44.526 137 68 5 11 146 12 141 2.93e-27 109
MsaG046774 AT2G47460.1 49.505 101 49 2 11 111 12 110 3.77e-27 109
MsaG046774 AT5G62320.1 46.281 121 55 4 11 123 13 131 5.65e-27 106
MsaG046774 AT3G62610.1 48.515 101 50 2 11 111 12 110 8.73e-27 108
MsaG046774 AT5G14340.1 47.368 114 57 3 11 123 24 135 9.28e-27 107
MsaG046774 AT1G68320.1 35.938 192 114 5 8 194 16 203 9.47e-27 107
MsaG046774 AT5G35550.1 43.860 114 62 2 2 115 5 116 1.11e-26 106
MsaG046774 AT4G13480.1 46.087 115 57 2 17 131 11 120 1.13e-26 106
MsaG046774 AT1G25340.1 45.631 103 55 1 17 119 23 124 1.15e-26 106
MsaG046774 AT5G49330.1 49.505 101 49 2 11 111 12 110 1.55e-26 107
MsaG046774 AT1G66230.1 46.957 115 58 3 11 124 12 124 2.44e-26 105
MsaG046774 AT5G16600.1 46.087 115 59 3 11 124 12 124 5.99e-26 105
MsaG046774 AT3G30210.1 47.059 102 53 1 17 118 32 132 8.08e-26 104
MsaG046774 AT3G60460.1 45.872 109 56 3 11 118 11 117 1.12e-25 104
MsaG046774 AT3G24310.1 47.475 99 51 1 17 115 23 120 1.63e-25 103
MsaG046774 AT3G48920.1 44.545 110 60 1 6 115 12 120 7.71e-25 101
MsaG046774 AT4G22680.1 45.217 115 60 3 11 124 12 124 1.33e-24 100
MsaG046774 AT3G06490.1 46.789 109 56 2 11 119 19 125 1.49e-23 99.0
MsaG046774 AT1G66380.1 42.857 112 61 3 7 117 4 113 1.60e-23 94.4
MsaG046774 AT1G66370.1 42.727 110 60 3 9 117 6 113 1.72e-23 97.4
MsaG046774 AT4G12350.1 45.714 105 55 2 11 115 12 114 2.28e-23 97.8
MsaG046774 AT5G26660.2 45.545 101 53 2 39 138 8 107 2.75e-23 98.2
MsaG046774 AT5G52260.1 46.087 115 61 1 1 115 1 114 3.10e-23 97.1
MsaG046774 AT1G25340.2 43.689 103 52 2 17 119 23 119 4.65e-23 97.1
MsaG046774 AT1G25340.3 43.689 103 52 2 17 119 23 119 5.93e-23 97.1
MsaG046774 AT3G53200.1 45.794 107 56 2 11 117 9 113 7.21e-23 95.5
MsaG046774 AT4G25560.1 45.794 107 56 2 9 115 8 112 7.52e-23 96.3
MsaG046774 AT1G79180.2 37.086 151 58 4 10 125 13 161 9.69e-23 97.1
MsaG046774 AT5G59780.3 42.593 108 61 1 17 124 13 119 1.26e-22 94.7
MsaG046774 AT1G66390.1 41.964 112 62 3 7 117 4 113 1.39e-22 95.1
MsaG046774 AT1G56650.1 38.281 128 68 4 7 125 4 129 1.42e-22 95.1
MsaG046774 AT3G46130.1 44.444 99 54 1 17 115 14 111 4.60e-22 93.6
MsaG046774 AT5G49620.1 44.660 103 56 1 17 119 31 132 5.31e-22 94.7
MsaG046774 AT4G18770.1 41.176 136 72 4 9 138 208 341 6.34e-22 95.9
MsaG046774 AT3G50060.1 43.396 106 58 2 17 122 9 112 2.79e-21 92.4
MsaG046774 AT5G49620.2 39.167 120 52 2 17 119 31 146 1.33e-20 90.9
MsaG046774 AT5G40350.2 51.351 74 35 1 43 116 3 75 4.01e-20 86.3
MsaG046774 AT4G37260.1 44.860 107 56 3 17 122 16 120 7.61e-20 89.0
MsaG046774 AT3G27810.2 52.778 72 33 1 45 116 4 74 9.78e-20 85.5
MsaG046774 AT5G58850.1 44.037 109 58 3 7 115 99 204 2.23e-19 88.6
MsaG046774 AT5G67300.1 47.000 100 50 3 17 115 9 106 2.60e-19 87.0
MsaG046774 AT3G27785.1 41.748 103 57 3 17 118 192 292 3.32e-19 88.2
MsaG046774 AT2G23290.1 45.000 100 52 3 17 115 16 113 7.18e-19 85.9
MsaG046774 AT2G39880.1 39.695 131 75 3 17 145 53 181 1.13e-18 85.9
MsaG046774 AT5G40360.1 41.414 99 56 2 17 115 161 257 1.16e-18 85.9
MsaG046774 AT5G11050.1 39.130 138 77 5 9 143 101 234 1.45e-18 86.3
MsaG046774 AT3G53200.2 52.055 73 34 1 45 117 9 80 1.99e-18 82.4
MsaG046774 AT1G17950.1 39.450 109 62 3 17 123 8 114 6.93e-18 82.0
MsaG046774 AT3G12820.2 55.224 67 29 1 49 115 3 68 7.77e-18 80.5
MsaG046774 AT2G25230.1 37.405 131 73 5 5 128 13 141 2.47e-17 80.1
MsaG046774 AT5G35550.2 52.113 71 33 1 45 115 50 119 3.25e-17 80.5
MsaG046774 AT3G09370.2 36.735 147 88 5 6 150 128 271 6.58e-17 81.6
MsaG046774 AT3G09370.2 37.255 102 61 2 9 110 80 178 6.88e-14 72.4
MsaG046774 AT3G09370.1 36.735 147 88 5 6 150 123 266 7.29e-17 81.6
MsaG046774 AT3G09370.1 37.255 102 61 2 9 110 75 173 7.01e-14 72.4
MsaG046774 AT3G09370.3 36.735 147 88 5 6 150 136 279 7.89e-17 81.3
MsaG046774 AT3G09370.3 37.255 102 61 2 9 110 88 186 9.76e-14 72.0
MsaG046774 AT3G55730.1 40.566 106 61 2 10 115 52 155 1.95e-16 79.7
MsaG046774 AT3G46130.3 48.611 72 36 1 44 115 9 79 2.24e-16 77.4
MsaG046774 AT4G33450.1 36.792 106 65 2 17 122 22 125 2.36e-16 77.8
MsaG046774 AT5G14750.3 43.373 83 41 2 38 115 3 84 2.71e-16 75.9
MsaG046774 AT5G59780.2 45.000 80 43 1 45 124 20 98 5.89e-16 75.9
MsaG046774 AT3G46130.4 49.296 71 35 1 45 115 20 89 6.69e-16 76.3
MsaG046774 AT2G37630.1 40.000 110 63 2 11 118 1 109 1.19e-15 77.4
MsaG046774 AT3G09230.1 37.000 100 61 2 17 116 58 155 1.22e-15 77.4
MsaG046774 AT5G17800.1 38.053 113 64 3 17 125 96 206 1.94e-15 76.3
MsaG046774 AT3G47600.2 46.479 71 37 1 45 115 39 108 1.99e-15 76.3
MsaG046774 AT1G26780.1 37.143 105 63 3 17 120 101 203 2.52e-15 75.5
MsaG046774 AT5G02320.3 38.182 110 65 3 6 115 60 166 2.80e-15 76.6
MsaG046774 AT5G02320.3 36.275 102 62 2 9 110 12 110 1.57e-13 71.6
MsaG046774 AT5G02320.1 38.182 110 65 3 6 115 120 226 3.10e-15 76.6
MsaG046774 AT5G02320.1 35.849 106 57 3 9 110 72 170 1.62e-13 71.6
MsaG046774 AT5G02320.2 38.182 110 65 3 6 115 120 226 3.10e-15 76.6
MsaG046774 AT5G02320.2 35.849 106 57 3 9 110 72 170 1.62e-13 71.6
MsaG046774 AT1G69560.1 39.000 100 56 3 17 113 110 207 3.35e-15 75.5
MsaG046774 AT1G26780.2 37.500 104 62 3 17 119 101 202 3.35e-15 75.9
MsaG046774 AT1G69560.2 39.000 100 56 3 17 113 126 223 3.61e-15 75.9
MsaG046774 AT4G00540.2 36.691 139 76 6 6 139 96 227 5.94e-15 75.5
MsaG046774 AT4G32730.1 38.182 110 65 3 6 115 80 186 6.49e-15 75.9
MsaG046774 AT4G32730.1 35.514 107 57 3 9 110 31 130 5.72e-13 70.1
MsaG046774 AT4G00540.1 36.691 139 76 6 6 139 94 225 7.20e-15 75.5
MsaG046774 AT4G32730.5 38.182 110 65 3 6 115 80 186 7.30e-15 75.9
MsaG046774 AT4G32730.5 35.514 107 57 3 9 110 31 130 6.65e-13 70.1
MsaG046774 AT4G32730.4 38.182 110 65 3 6 115 80 186 7.30e-15 75.9
MsaG046774 AT4G32730.4 35.514 107 57 3 9 110 31 130 6.65e-13 70.1
MsaG046774 AT4G32730.3 38.182 110 65 3 6 115 80 186 7.30e-15 75.9
MsaG046774 AT4G32730.3 35.514 107 57 3 9 110 31 130 6.65e-13 70.1
MsaG046774 AT4G32730.2 38.182 110 65 3 6 115 80 186 7.30e-15 75.9
MsaG046774 AT4G32730.2 35.514 107 57 3 9 110 31 130 6.65e-13 70.1
MsaG046774 AT1G73410.2 33.775 151 90 4 17 159 9 157 1.01e-14 72.4
MsaG046774 AT1G73410.1 38.318 107 64 2 17 123 9 113 1.16e-14 72.8
MsaG046774 AT1G66380.3 45.333 75 39 2 44 117 7 80 1.99e-14 68.9
MsaG046774 AT1G66380.2 44.118 68 37 1 7 74 4 70 3.94e-14 68.2
MsaG046774 AT3G29020.1 38.462 104 59 3 17 117 68 169 4.76e-14 70.9
MsaG046774 AT5G11510.2 34.545 110 69 3 6 115 74 180 8.20e-14 72.8
MsaG046774 AT5G11510.2 35.294 102 64 2 9 110 25 124 1.20e-12 68.9
MsaG046774 AT3G29020.2 38.462 104 59 3 17 117 70 171 8.25e-14 71.2
MsaG046774 AT5G11510.3 34.545 110 69 3 6 115 74 180 8.55e-14 72.8
MsaG046774 AT5G11510.3 35.294 102 64 2 9 110 25 124 1.20e-12 69.3
MsaG046774 AT5G11510.1 34.545 110 69 3 6 115 74 180 8.55e-14 72.8
MsaG046774 AT5G11510.1 35.294 102 64 2 9 110 25 124 1.20e-12 69.3
MsaG046774 AT5G11510.4 34.545 110 69 3 6 115 74 180 8.55e-14 72.8
MsaG046774 AT5G11510.4 35.294 102 64 2 9 110 25 124 1.20e-12 69.3
MsaG046774 AT5G11510.5 34.545 110 69 3 6 115 74 180 8.63e-14 72.4
MsaG046774 AT5G11510.5 35.294 102 64 2 9 110 25 124 1.27e-12 68.9
MsaG046774 AT1G14350.2 34.513 113 72 2 7 119 18 128 4.00e-13 70.1
MsaG046774 AT1G14350.1 34.513 113 72 2 7 119 18 128 4.00e-13 70.1
MsaG046774 AT5G40430.1 37.168 113 64 4 7 115 43 152 6.44e-13 68.2
MsaG046774 AT2G02820.2 33.628 113 73 2 7 119 23 133 1.23e-12 68.6
MsaG046774 AT2G02820.1 33.628 113 73 2 7 119 23 133 1.32e-12 68.6
MsaG046774 AT1G22640.3 51.515 66 30 2 59 123 2 66 1.96e-12 65.9
MsaG046774 AT2G02820.3 35.922 103 64 2 17 119 33 133 2.66e-12 67.0
MsaG046774 AT3G18100.3 38.776 98 57 3 12 109 497 591 3.62e-12 67.8
MsaG046774 AT3G18100.4 38.776 98 57 3 12 109 384 478 3.81e-12 67.4
MsaG046774 AT3G18100.2 38.776 98 57 3 12 109 332 426 3.89e-12 67.4
MsaG046774 AT3G18100.1 38.776 98 57 3 12 109 545 639 4.12e-12 67.4
MsaG046774 AT5G39700.1 37.864 103 62 2 9 111 51 151 8.43e-12 63.5

Find 0 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
Chromosome Type Strat End Strand Name
Contig1 gene 2110998 2112275 2110998 ID=MsaG046774
Contig1 mRNA 2110998 2112275 2110998 ID=MsaT046774.1;Parent=MsaG046774
Contig1 exon 2110998 2111285 2110998 ID=MsaT046774.1.exon1;Parent=MsaT046774.1
Contig1 CDS 2110998 2111285 2110998 ID=cds.MsaT046774.1;Parent=MsaT046774.1
Contig1 exon 2111476 2111798 2111476 ID=MsaT046774.1.exon2;Parent=MsaT046774.1
Contig1 CDS 2111476 2111798 2111476 ID=cds.MsaT046774.1;Parent=MsaT046774.1
Contig1 exon 2111918 2112275 2111918 ID=MsaT046774.1.exon3;Parent=MsaT046774.1
Contig1 CDS 2111918 2112275 2111918 ID=cds.MsaT046774.1;Parent=MsaT046774.1
Gene Sequence

>MsaT046774.1

ATGACTTCATCGTTGGTTACTAATAAAAGGTTGAAGAAAGGAACATTATGGTCAGAAGAAGAAGATGAAATATTAAAAGCATATGTTGAAAAACATGGAACCGGAAATTGGAAGGAGGTATCAAAGAACACGGGACTCGCACACTGTGGAAATAGTTGTCGTTTTAGATGGTATAATACTCTACGACCTGATGTAAAAAAGGGTCCGTTTAGTAAAGAAGAAGAAGAAAAATTCTTTGAGTTATGTTCTAAGTTTGGTGAGTTCAAATGGTCTAAGATGGCTCTCGAGATGCCTGGAAGAACCGATAATGACATCAAGAACTTTTGGAATGCAAGAAAAAGAAAACATGAAAGACATGGCTTGTCACCCTTCCCTGACAACATGGAACTGGTTGATGGTCTGAAGAGTAGTAATGGAAAAAGAATAAGGAATTCACAAGAAAACAAATTTAAGATACCAGAAGTTAAATTTGTAAATCAAATTCTGCATACAAACTTGTCTGATCTCCCAAATAAGCAGTTTTCAAAGTTGATTGATGATTCAAATATGTTCTTCAATAATGTGGGAAGTACTTCTACAAGCAATCATACTACTTCAACTTTGATTGATAGGGAAGAAGGGAAGAAGCCTTTGGAGAACGATGAAAAAGGGAAGAAGCCTTTGCAGAATGATGTTGAAGCAAACCTGCATGACGACATAATGAATCCGGAATTTTGGAATGACGCGTTCAACACATTAGTCAATGAGGTTTACAATGACTTGCATGACAAGCTTCCATATGATTTTAATGATGCCTTAGACACTTGCATGACAATGCAATCGGATCTGCCTCCACTCCCACCACCTATGGAGACACAACATCAGATGTCAGAGATAAATAACTGGAAGAAGGCAATTGCTTTGGAGGAAGGTGTTGATGAAAGCCAGGTCATTTGGTTTGAGGAACCCTTATACGGATATTTGGTTTGA
Protein sequence

>MsaT046774.1

MTSSLVTNKRLKKGTLWSEEEDEILKAYVEKHGTGNWKEVSKNTGLAHCGNSCRFRWYNTLRPDVKKGPFSKEEEEKFFELCSKFGEFKWSKMALEMPGRTDNDIKNFWNARKRKHERHGLSPFPDNMELVDGLKSSNGKRIRNSQENKFKIPEVKFVNQILHTNLSDLPNKQFSKLIDDSNMFFNNVGSTSTSNHTTSTLIDREEGKKPLENDEKGKKPLQNDVEANLHDDIMNPEFWNDAFNTLVNEVYNDLHDKLPYDFNDALDTCMTMQSDLPPLPPPMETQHQMSEINNWKKAIALEEGVDESQVIWFEEPLYGYLV*