AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa ssp. caerulea / MsaG046802

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG046802 MtrunA17_Chr1g0194291 88.940 217 13 2 1 207 1 216 1.09e-125 357
MsaG046802 MtrunA17_Chr1g0194301 60.697 201 60 3 15 196 26 226 4.41e-80 241
MsaG046802 MtrunA17_Chr4g0068921 70.423 142 32 1 14 145 16 157 9.37e-66 202
MsaG046802 MtrunA17_Chr1g0209661 64.189 148 41 2 8 145 15 160 1.11e-65 206
MsaG046802 MtrunA17_Chr2g0293911 71.942 139 29 1 17 145 19 157 2.48e-64 203
MsaG046802 MtrunA17_Chr7g0228231 60.465 129 41 1 9 127 1 129 1.40e-51 166
MsaG046802 MtrunA17_Chr6g0450101 69.444 108 23 1 22 119 14 121 5.07e-51 165
MsaG046802 MtrunA17_Chr1g0168661 59.836 122 38 2 6 117 6 126 3.23e-45 152
MsaG046802 MtrunA17_Chr1g0186061 62.385 109 31 1 19 117 17 125 7.34e-44 148
MsaG046802 MtrunA17_Chr5g0410961 52.344 128 51 1 18 135 8 135 1.77e-40 142
MsaG046802 MtrunA17_Chr8g0346561 58.974 117 36 2 21 125 11 127 4.06e-40 139
MsaG046802 MtrunA17_Chr4g0070611 60.345 116 33 2 15 120 8 120 6.64e-40 139
MsaG046802 MtrunA17_Chr4g0070641 59.821 112 35 1 19 120 9 120 1.02e-39 135
MsaG046802 MtrunA17_Chr5g0395281 56.522 115 40 1 18 122 8 122 1.28e-39 139
MsaG046802 MtrunA17_Chr3g0115821 51.429 140 57 2 12 141 2 140 1.52e-38 137
MsaG046802 MtrunA17_Chr4g0039971 55.652 115 41 1 18 122 9 123 1.87e-38 137
MsaG046802 MtrunA17_Chr3g0110351 53.043 115 44 1 18 122 8 122 1.34e-37 133
MsaG046802 MtrunA17_Chr4g0030881 55.652 115 34 2 23 120 8 122 1.92e-37 132
MsaG046802 MtrunA17_Chr7g0275911 58.182 110 36 1 18 117 8 117 2.04e-37 131
MsaG046802 MtrunA17_Chr2g0327821 55.046 109 39 1 22 120 6 114 3.40e-37 130
MsaG046802 MtrunA17_Chr5g0434571 53.043 115 44 1 18 122 44 158 3.48e-37 133
MsaG046802 MtrunA17_Chr2g0281071 54.310 116 43 1 17 122 8 123 3.76e-37 133
MsaG046802 MtrunA17_Chr7g0228891 55.000 120 43 2 18 126 8 127 4.43e-37 131
MsaG046802 MtrunA17_Chr4g0068061 63.725 102 27 1 21 112 11 112 4.62e-37 132
MsaG046802 MtrunA17_Chr1g0187761 54.310 116 43 1 21 126 11 126 4.88e-37 130
MsaG046802 MtrunA17_Chr1g0167691 58.095 105 34 1 21 115 11 115 4.94e-37 130
MsaG046802 MtrunA17_Chr4g0057031 53.913 115 43 1 18 122 8 122 6.72e-37 130
MsaG046802 MtrunA17_Chr2g0323411 55.556 108 38 1 18 115 8 115 7.89e-37 132
MsaG046802 MtrunA17_Chr4g0048511 53.448 116 44 1 17 122 8 123 8.57e-37 132
MsaG046802 MtrunA17_Chr3g0099131 54.206 107 39 1 22 118 41 147 1.29e-36 135
MsaG046802 MtrunA17_Chr3g0080861 56.604 106 36 1 22 117 37 142 2.06e-36 134
MsaG046802 MtrunA17_Chr4g0022931 47.761 134 51 2 17 131 8 141 4.97e-36 128
MsaG046802 MtrunA17_Chr7g0217741 55.357 112 40 1 21 122 11 122 5.01e-36 129
MsaG046802 MtrunA17_Chr1g0203411 55.556 108 38 1 21 118 11 118 5.75e-36 129
MsaG046802 MtrunA17_Chr1g0167661 57.143 105 35 1 21 115 11 115 7.64e-36 127
MsaG046802 MtrunA17_Chr6g0453471 51.587 126 50 2 18 132 8 133 7.87e-36 130
MsaG046802 MtrunA17_Chr3g0131121 59.804 102 31 1 24 115 14 115 1.11e-35 128
MsaG046802 MtrunA17_Chr4g0022901 53.636 110 41 1 17 116 8 117 1.27e-35 127
MsaG046802 MtrunA17_Chr7g0261281 55.556 108 38 1 21 118 11 118 1.37e-35 127
MsaG046802 MtrunA17_Chr1g0180391 57.547 106 35 1 22 117 19 124 1.56e-35 126
MsaG046802 MtrunA17_Chr4g0022911 44.304 158 58 3 20 155 11 160 2.40e-35 127
MsaG046802 MtrunA17_Chr8g0387421 54.054 111 41 1 18 118 8 118 4.41e-35 127
MsaG046802 MtrunA17_Chr8g0349261 53.636 110 40 1 17 115 8 117 6.05e-35 126
MsaG046802 MtrunA17_Chr1g0193371 53.448 116 44 1 22 127 12 127 7.31e-35 127
MsaG046802 MtrunA17_Chr7g0274581 51.852 108 42 1 21 118 11 118 7.74e-35 123
MsaG046802 MtrunA17_Chr4g0044421 41.379 174 75 3 24 183 14 174 9.48e-35 122
MsaG046802 MtrunA17_Chr1g0194951 45.324 139 56 3 21 149 11 139 1.17e-34 127
MsaG046802 MtrunA17_Chr3g0121241 57.009 107 36 1 19 115 39 145 1.19e-34 125
MsaG046802 MtrunA17_Chr4g0055981 50.400 125 49 2 6 120 42 163 1.25e-34 124
MsaG046802 MtrunA17_Chr2g0323351 54.206 107 39 1 18 114 8 114 1.81e-34 124
MsaG046802 MtrunA17_Chr8g0354661 52.830 106 40 1 22 117 37 142 2.51e-34 129
MsaG046802 MtrunA17_Chr5g0435101 46.923 130 56 2 9 128 1 127 2.88e-34 122
MsaG046802 MtrunA17_Chr1g0211161 33.796 216 118 3 22 214 13 226 3.13e-34 122
MsaG046802 MtrunA17_Chr1g0203441 52.137 117 46 1 23 129 14 130 3.45e-34 123
MsaG046802 MtrunA17_Chr7g0217221 50.420 119 49 1 18 126 8 126 4.04e-34 123
MsaG046802 MtrunA17_Chr4g0037141 58.824 102 32 1 24 115 14 115 5.25e-34 123
MsaG046802 MtrunA17_Chr2g0309911 51.923 104 40 1 22 115 11 114 6.11e-34 124
MsaG046802 MtrunA17_Chr4g0042671 52.632 114 44 1 19 122 9 122 6.12e-34 125
MsaG046802 MtrunA17_Chr5g0397231 56.311 103 35 1 18 110 8 110 6.84e-34 124
MsaG046802 MtrunA17_Chr2g0330041 49.123 114 48 1 12 115 2 115 9.62e-34 125
MsaG046802 MtrunA17_Chr2g0328771 53.704 108 40 1 22 119 20 127 1.05e-33 123
MsaG046802 MtrunA17_Chr8g0385321 52.632 114 44 1 24 127 14 127 1.53e-33 123
MsaG046802 MtrunA17_Chr8g0342541 49.123 114 48 1 12 115 2 115 1.72e-33 123
MsaG046802 MtrunA17_Chr1g0151941 49.524 105 42 1 22 115 12 116 2.39e-33 120
MsaG046802 MtrunA17_Chr3g0117091 54.808 104 37 1 22 115 12 115 2.98e-33 123
MsaG046802 MtrunA17_Chr8g0343831 54.286 105 38 1 24 118 10 114 3.95e-33 120
MsaG046802 MtrunA17_Chr8g0342481 48.696 115 48 1 12 115 2 116 6.62e-33 123
MsaG046802 MtrunA17_Chr4g0022881 50.000 110 45 1 18 117 8 117 6.93e-33 119
MsaG046802 MtrunA17_Chr3g0092401 52.294 109 42 1 21 119 12 120 7.35e-33 121
MsaG046802 MtrunA17_Chr6g0453211 55.340 103 36 1 18 110 8 110 9.48e-33 121
MsaG046802 MtrunA17_Chr8g0342521 50.926 108 43 1 18 115 8 115 9.75e-33 121
MsaG046802 MtrunA17_Chr3g0088461 49.606 127 52 2 1 117 3 127 9.99e-33 121
MsaG046802 MtrunA17_Chr1g0154031 52.830 106 40 1 22 117 76 181 1.02e-32 122
MsaG046802 MtrunA17_Chr7g0270891 53.153 111 42 1 22 122 12 122 1.21e-32 121
MsaG046802 MtrunA17_Chr7g0271241 54.310 116 43 1 22 127 12 127 1.41e-32 122
MsaG046802 MtrunA17_Chr4g0032401 46.617 133 56 2 1 123 1 128 1.65e-32 120
MsaG046802 MtrunA17_Chr7g0254411 45.802 131 52 2 19 130 9 139 2.71e-32 120
MsaG046802 MtrunA17_Chr4g0022891 45.312 128 53 2 18 135 8 128 3.25e-32 117
MsaG046802 MtrunA17_Chr4g0028311 40.000 180 80 5 18 172 8 184 3.99e-32 119
MsaG046802 MtrunA17_Chr4g0060721 53.333 105 39 1 21 115 12 116 4.56e-32 119
MsaG046802 MtrunA17_Chr6g0470971 50.000 112 46 1 14 115 6 117 7.54e-32 117
MsaG046802 MtrunA17_Chr1g0193801 53.271 107 40 1 22 118 12 118 1.05e-31 119
MsaG046802 MtrunA17_Chr2g0322521 49.074 108 45 1 20 117 27 134 2.24e-31 119
MsaG046802 MtrunA17_Chr3g0103281 44.203 138 61 3 22 148 12 144 2.68e-31 117
MsaG046802 MtrunA17_Chr4g0058631 53.846 104 38 1 22 115 12 115 6.15e-31 117
MsaG046802 MtrunA17_Chr2g0311221 49.091 110 46 1 11 110 3 112 8.53e-31 116
MsaG046802 MtrunA17_Chr7g0269831 51.786 112 44 1 19 120 9 120 9.56e-31 116
MsaG046802 MtrunA17_Chr2g0327351 51.923 104 39 1 18 110 8 111 1.10e-30 115
MsaG046802 MtrunA17_Chr5g0417821 49.107 112 47 1 21 122 6 117 1.53e-30 114
MsaG046802 MtrunA17_Chr1g0192411 50.943 106 42 1 22 117 12 117 2.51e-30 116
MsaG046802 MtrunA17_Chr1g0152011 49.541 109 44 1 18 115 8 116 7.22e-30 114
MsaG046802 MtrunA17_Chr3g0135311 49.541 109 44 1 18 115 8 116 1.41e-29 113
MsaG046802 MtrunA17_Chr5g0400821 48.624 109 45 1 18 115 8 116 2.00e-29 112
MsaG046802 MtrunA17_Chr6g0452271 45.217 115 53 1 18 122 8 122 3.80e-29 112
MsaG046802 MtrunA17_Chr7g0264641 44.167 120 56 1 18 126 8 127 1.88e-28 108
MsaG046802 MtrunA17_Chr7g0220341 46.552 116 50 1 13 116 16 131 1.94e-28 108
MsaG046802 MtrunA17_Chr8g0334881 43.103 116 55 3 15 119 3 118 2.27e-28 109
MsaG046802 MtrunA17_Chr4g0072751 50.000 104 41 1 18 110 8 111 2.90e-28 109
MsaG046802 MtrunA17_Chr7g0247131 60.256 78 31 0 45 122 11 88 3.69e-28 107
MsaG046802 MtrunA17_Chr8g0360111 51.887 106 41 1 17 112 20 125 5.70e-28 107
MsaG046802 MtrunA17_Chr4g0054391 49.020 102 41 1 18 108 8 109 1.48e-27 106
MsaG046802 MtrunA17_Chr5g0434831 50.000 110 45 1 17 116 2 111 2.04e-27 103
MsaG046802 MtrunA17_Chr7g0240821 47.321 112 49 1 26 127 5 116 6.29e-27 103
MsaG046802 MtrunA17_Chr5g0434931 47.826 115 50 1 11 115 24 138 9.23e-27 104
MsaG046802 MtrunA17_Chr5g0440781 44.037 109 50 2 20 117 10 118 3.67e-26 100
MsaG046802 MtrunA17_Chr7g0228991 50.000 106 43 1 21 116 28 133 3.99e-26 102
MsaG046802 MtrunA17_Chr6g0487491 44.444 117 46 2 18 115 8 124 5.91e-26 102
MsaG046802 MtrunA17_Chr3g0099141 48.837 86 34 1 18 93 36 121 6.38e-26 98.6
MsaG046802 MtrunA17_Chr5g0434841 49.091 110 46 1 17 116 15 124 9.61e-26 102
MsaG046802 MtrunA17_Chr5g0434911 49.524 105 43 1 21 115 20 124 1.23e-25 101
MsaG046802 MtrunA17_Chr5g0440761 44.037 109 50 2 20 117 10 118 1.26e-25 101
MsaG046802 MtrunA17_Chr5g0441141 44.037 109 50 2 20 117 10 118 1.44e-25 101
MsaG046802 MtrunA17_Chr5g0441131 44.340 106 48 2 23 117 10 115 1.44e-24 96.3
MsaG046802 MtrunA17_Chr4g0013361 41.667 108 51 3 16 111 3 110 1.62e-24 99.0
MsaG046802 MtrunA17_Chr2g0323321 54.878 82 27 1 21 92 10 91 2.15e-23 91.3
MsaG046802 MtrunA17_Chr3g0133601 45.098 102 47 1 24 116 37 138 3.62e-22 90.9
MsaG046802 MtrunA17_Chr2g0294811 54.321 81 27 1 18 88 8 88 1.25e-21 86.7
MsaG046802 MtrunA17_Chr6g0454921 40.870 115 59 1 24 129 15 129 2.86e-21 88.2
MsaG046802 MtrunA17_Chr4g0008551 46.939 98 43 2 24 112 38 135 3.41e-21 90.5
MsaG046802 MtrunA17_Chr5g0395221 51.250 80 29 1 19 88 9 88 4.77e-21 84.3
MsaG046802 MtrunA17_Chr5g0401731 41.667 108 54 1 24 122 15 122 4.87e-21 89.7
MsaG046802 MtrunA17_Chr5g0429661 36.800 125 70 1 14 129 112 236 8.76e-21 89.7
MsaG046802 MtrunA17_Chr7g0238631 40.777 103 52 1 22 115 111 213 1.09e-20 90.5
MsaG046802 MtrunA17_Chr4g0058991 36.170 141 79 3 19 150 204 342 1.67e-20 89.7
MsaG046802 MtrunA17_Chr8g0342511 50.000 80 30 1 18 87 8 87 3.03e-20 82.4
MsaG046802 MtrunA17_Chr3g0139671 36.975 119 66 1 22 131 83 201 4.82e-20 88.6
MsaG046802 MtrunA17_Chr7g0229101 55.556 72 32 0 41 112 1 72 6.64e-20 84.7
MsaG046802 MtrunA17_Chr4g0042611 51.948 77 27 1 22 88 12 88 8.97e-20 80.9
MsaG046802 MtrunA17_Chr6g0480581 29.596 223 122 7 24 211 4 226 9.59e-20 84.7
MsaG046802 MtrunA17_Chr6g0460661 35.938 128 72 3 9 127 2 128 9.68e-20 83.2
MsaG046802 MtrunA17_Chr3g0093811 47.191 89 46 1 45 132 15 103 1.15e-19 85.1
MsaG046802 MtrunA17_Chr8g0342461 48.052 77 29 1 24 89 14 90 1.41e-19 82.0
MsaG046802 MtrunA17_Chr3g0117511 36.029 136 76 3 24 150 183 316 1.43e-19 87.0
MsaG046802 MtrunA17_Chr8g0342531 47.561 82 33 1 18 89 8 89 2.12e-19 82.0
MsaG046802 MtrunA17_Chr8g0342471 48.052 77 29 1 24 89 14 90 4.08e-19 80.9
MsaG046802 MtrunA17_Chr5g0434901 60.000 65 26 0 46 110 7 71 4.64e-19 80.1
MsaG046802 MtrunA17_Chr1g0157731 36.893 103 56 1 22 115 89 191 6.50e-19 85.5
MsaG046802 MtrunA17_Chr7g0229131 51.351 74 36 0 41 114 1 74 8.07e-19 80.9
MsaG046802 MtrunA17_Chr5g0417621 36.975 119 62 3 13 118 119 237 8.16e-19 84.7
MsaG046802 MtrunA17_Chr4g0053431 39.048 105 55 1 24 119 5 109 8.57e-19 82.8
MsaG046802 MtrunA17_Chr4g0042501 31.579 190 100 7 14 178 91 275 1.80e-18 83.6
MsaG046802 MtrunA17_Chr7g0238651 35.455 110 59 1 27 124 10 119 1.26e-17 80.9
MsaG046802 MtrunA17_Chr5g0437321 43.750 96 45 1 24 110 19 114 1.68e-17 79.7
MsaG046802 MtrunA17_Chr7g0228531 33.094 139 79 3 8 135 204 339 2.24e-17 80.5
MsaG046802 MtrunA17_Chr5g0425591 40.964 83 38 2 23 94 10 92 1.76e-16 72.4
MsaG046802 MtrunA17_Chr3g0125801 33.835 133 79 2 9 132 1 133 2.25e-16 76.6
MsaG046802 MtrunA17_Chr5g0416341 39.000 100 52 1 27 117 29 128 2.92e-16 77.4
MsaG046802 MtrunA17_Chr6g0460671 40.230 87 48 1 41 127 129 211 6.34e-16 75.9
MsaG046802 MtrunA17_Chr6g0453751 38.889 108 38 4 14 93 3 110 1.08e-15 71.2
MsaG046802 MtrunA17_Chr7g0254261 41.379 87 48 2 37 123 113 196 1.85e-15 74.7
MsaG046802 MtrunA17_Chr7g0228401 47.619 63 33 0 48 110 312 374 2.12e-15 75.1
MsaG046802 MtrunA17_Chr1g0177901 32.117 137 89 4 48 183 27 160 3.65e-15 72.0
MsaG046802 MtrunA17_Chr7g0233061 29.677 155 89 4 10 150 161 309 6.81e-15 72.8
MsaG046802 MtrunA17_Chr5g0397841 38.542 96 50 1 22 108 108 203 1.22e-14 72.8
MsaG046802 MtrunA17_Chr8g0362231 35.088 114 62 2 27 131 25 135 1.09e-13 69.7
MsaG046802 MtrunA17_Chr7g0228481 32.258 124 68 4 8 118 204 324 1.84e-12 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG046802 AT1G48000.1 68.750 144 35 1 22 155 32 175 6.02e-70 215
MsaG046802 AT2G47190.1 45.283 265 104 7 5 229 3 266 8.34e-69 213
MsaG046802 AT1G68320.1 46.667 240 98 5 22 231 19 258 5.27e-65 204
MsaG046802 AT5G49620.1 65.584 154 43 1 2 145 6 159 9.26e-64 201
MsaG046802 AT3G06490.1 68.000 150 34 2 10 145 3 152 5.47e-63 199
MsaG046802 AT1G25340.1 63.571 140 39 2 18 145 12 151 2.86e-60 191
MsaG046802 AT5G49620.2 60.119 168 43 2 2 145 6 173 3.77e-60 192
MsaG046802 AT1G25340.2 65.185 135 40 2 18 145 12 146 9.77e-60 190
MsaG046802 AT1G25340.3 65.185 135 40 2 18 145 12 146 2.86e-59 189
MsaG046802 AT3G27810.1 67.273 110 26 1 19 118 17 126 6.60e-51 166
MsaG046802 AT5G40350.1 51.553 161 60 4 22 166 17 175 9.39e-50 162
MsaG046802 AT3G01530.1 65.789 114 29 1 14 117 17 130 2.19e-49 161
MsaG046802 AT3G24310.1 62.385 109 31 1 19 117 15 123 2.17e-44 150
MsaG046802 AT3G30210.1 64.486 107 28 1 21 117 26 132 2.94e-43 147
MsaG046802 AT4G13480.1 62.857 105 29 1 23 117 7 111 6.35e-43 146
MsaG046802 AT3G46130.1 57.143 112 38 1 19 120 6 117 2.08e-40 139
MsaG046802 AT3G27810.2 78.378 74 16 0 45 118 4 77 2.48e-40 137
MsaG046802 AT5G65230.1 52.344 128 51 1 12 129 2 129 8.93e-40 139
MsaG046802 AT5G59780.3 56.881 109 37 1 22 120 8 116 1.26e-39 137
MsaG046802 AT3G02940.2 55.372 121 44 1 12 122 2 122 1.34e-39 139
MsaG046802 AT3G02940.1 55.372 121 44 1 12 122 2 122 2.12e-39 139
MsaG046802 AT3G02940.3 55.372 121 44 1 12 122 2 122 2.12e-39 139
MsaG046802 AT5G16770.4 55.372 121 44 1 12 122 2 122 8.01e-39 137
MsaG046802 AT5G16770.3 55.372 121 44 1 12 122 2 122 8.01e-39 137
MsaG046802 AT5G40350.2 52.344 128 53 3 45 166 5 130 1.03e-38 132
MsaG046802 AT5G16770.1 55.372 121 44 1 12 122 2 122 1.28e-38 137
MsaG046802 AT5G16770.2 55.372 121 44 1 12 122 2 122 1.28e-38 137
MsaG046802 AT4G05100.1 55.172 116 42 1 17 122 8 123 2.04e-38 136
MsaG046802 AT1G34670.1 50.714 140 58 2 12 141 2 140 3.63e-38 136
MsaG046802 AT5G62320.1 51.538 130 46 1 18 130 9 138 9.18e-38 132
MsaG046802 AT3G23250.1 37.981 208 85 5 21 212 11 190 1.42e-37 133
MsaG046802 AT1G66230.1 53.043 115 44 1 18 122 8 122 2.23e-37 132
MsaG046802 AT1G06180.1 53.390 118 45 1 21 128 11 128 2.57e-37 131
MsaG046802 AT5G10280.1 52.066 121 48 1 12 122 2 122 6.20e-37 132
MsaG046802 AT3G01140.2 55.652 115 41 1 18 122 8 122 6.76e-37 132
MsaG046802 AT1G22640.1 55.556 117 42 1 22 128 12 128 1.22e-36 130
MsaG046802 AT4G21440.1 54.386 114 42 1 19 122 9 122 1.32e-36 132
MsaG046802 AT5G14750.1 43.373 166 79 4 8 161 4 166 1.45e-36 128
MsaG046802 AT3G01140.1 55.652 115 41 1 18 122 51 165 1.66e-36 132
MsaG046802 AT4G28110.1 53.509 114 43 1 12 115 2 115 1.82e-36 130
MsaG046802 AT4G12350.1 40.104 192 88 5 22 203 12 186 2.95e-36 129
MsaG046802 AT5G15310.4 52.893 121 47 1 12 122 2 122 3.57e-36 128
MsaG046802 AT3G13540.1 36.697 218 102 5 19 226 20 211 4.10e-36 128
MsaG046802 AT5G14340.1 50.400 125 52 1 8 122 10 134 4.51e-36 129
MsaG046802 AT5G54230.1 54.955 111 40 1 22 122 12 122 5.20e-36 130
MsaG046802 AT5G16600.1 51.304 115 46 1 18 122 8 122 5.30e-36 130
MsaG046802 AT2G31180.1 57.143 105 35 1 21 115 11 115 5.53e-36 128
MsaG046802 AT5G15310.2 53.913 115 43 1 18 122 8 122 7.30e-36 129
MsaG046802 AT3G11440.2 47.059 119 53 1 9 117 28 146 7.67e-36 132
MsaG046802 AT5G15310.1 53.913 115 43 1 18 122 8 122 7.84e-36 129
MsaG046802 AT4G22680.1 50.000 120 50 1 18 127 8 127 1.19e-35 127
MsaG046802 AT5G06100.1 52.336 107 41 1 21 117 31 137 1.27e-35 131
MsaG046802 AT5G40330.1 54.955 111 38 2 15 115 7 115 2.09e-35 125
MsaG046802 AT4G26930.1 49.593 123 49 2 9 118 3 125 2.37e-35 129
MsaG046802 AT3G47600.1 52.991 117 43 2 18 122 8 124 3.04e-35 128
MsaG046802 AT3G11440.3 47.059 119 53 1 9 117 28 146 3.53e-35 131
MsaG046802 AT3G11440.4 47.059 119 53 1 9 117 28 146 3.53e-35 131
MsaG046802 AT3G11440.1 47.059 119 53 1 9 117 28 146 3.53e-35 131
MsaG046802 AT5G06100.5 52.336 107 41 1 21 117 31 137 3.82e-35 131
MsaG046802 AT5G06100.2 52.336 107 41 1 21 117 31 137 3.82e-35 131
MsaG046802 AT5G06100.3 52.336 107 41 1 21 117 31 137 3.82e-35 131
MsaG046802 AT5G06100.4 52.336 107 41 1 21 117 31 137 3.82e-35 131
MsaG046802 AT4G34990.1 59.804 102 31 1 24 115 14 115 5.09e-35 126
MsaG046802 AT3G53200.1 56.075 107 37 1 19 115 6 112 5.39e-35 125
MsaG046802 AT5G07690.1 55.769 104 36 1 21 114 11 114 5.75e-35 127
MsaG046802 AT2G32460.2 52.336 107 41 1 21 117 5 111 8.59e-35 129
MsaG046802 AT2G32460.1 52.336 107 41 1 21 117 17 123 8.98e-35 129
MsaG046802 AT1G35515.1 42.353 170 79 5 22 181 12 172 1.10e-34 123
MsaG046802 AT2G47460.1 56.075 107 37 1 19 115 9 115 1.60e-34 127
MsaG046802 AT5G60890.1 51.304 115 46 1 19 123 9 123 1.79e-34 125
MsaG046802 AT3G27920.1 54.545 110 39 2 16 115 9 117 1.87e-34 123
MsaG046802 AT5G49330.1 58.095 105 34 1 21 115 11 115 1.89e-34 126
MsaG046802 AT5G07700.1 54.286 105 38 1 21 115 11 115 1.96e-34 126
MsaG046802 AT5G07700.2 54.286 105 38 1 21 115 11 115 1.96e-34 126
MsaG046802 AT4G17785.2 52.586 116 45 1 17 122 8 123 2.06e-34 126
MsaG046802 AT4G38620.1 59.804 102 31 1 24 115 14 115 2.48e-34 124
MsaG046802 AT4G17785.1 50.407 123 51 1 17 129 8 130 2.60e-34 126
MsaG046802 AT5G61420.2 54.286 105 38 1 21 115 11 115 3.32e-34 126
MsaG046802 AT1G18570.1 56.075 107 37 1 19 115 10 116 3.50e-34 125
MsaG046802 AT4G09460.1 42.105 190 92 5 24 201 14 197 3.77e-34 123
MsaG046802 AT2G16720.1 58.654 104 33 1 22 115 12 115 7.56e-34 123
MsaG046802 AT1G09540.1 52.586 116 45 1 22 127 12 127 7.65e-34 125
MsaG046802 AT3G13890.2 50.926 108 43 1 18 115 8 115 7.69e-34 125
MsaG046802 AT3G62610.1 55.140 107 38 1 19 115 9 115 7.92e-34 124
MsaG046802 AT1G57560.2 56.731 104 35 1 22 115 12 115 9.24e-34 123
MsaG046802 AT1G57560.1 56.731 104 35 1 22 115 12 115 9.67e-34 124
MsaG046802 AT5G62470.2 54.128 109 40 1 21 119 11 119 1.19e-33 124
MsaG046802 AT1G63910.1 52.252 111 43 1 18 118 8 118 1.45e-33 124
MsaG046802 AT3G61250.1 51.304 115 46 1 18 122 8 122 1.48e-33 123
MsaG046802 AT1G79180.1 50.000 118 49 1 11 118 3 120 2.17e-33 122
MsaG046802 AT3G46130.3 62.353 85 32 0 36 120 1 85 2.67e-33 120
MsaG046802 AT5G35550.1 50.769 130 46 2 22 133 14 143 3.04e-33 121
MsaG046802 AT5G26660.1 53.153 111 42 1 22 122 12 122 3.05e-33 123
MsaG046802 AT5G52600.1 51.818 110 43 1 16 115 6 115 7.19e-33 118
MsaG046802 AT1G16490.1 49.565 115 48 1 11 115 3 117 7.28e-33 120
MsaG046802 AT3G13890.1 47.863 117 42 1 18 115 8 124 9.79e-33 122
MsaG046802 AT5G59780.2 67.105 76 25 0 45 120 20 95 2.02e-32 117
MsaG046802 AT3G12720.1 50.962 104 41 1 22 115 22 125 2.10e-32 120
MsaG046802 AT3G08500.1 47.368 133 54 2 1 117 3 135 2.18e-32 120
MsaG046802 AT1G08810.1 50.000 116 48 1 21 126 11 126 2.39e-32 119
MsaG046802 AT3G46130.4 67.105 76 25 0 45 120 20 95 4.70e-32 117
MsaG046802 AT3G28910.1 51.786 112 44 1 21 122 11 122 4.87e-32 119
MsaG046802 AT2G26960.1 43.609 133 62 3 10 130 6 137 5.12e-32 121
MsaG046802 AT5G12870.1 50.926 108 43 1 22 119 18 125 5.18e-32 118
MsaG046802 AT5G62470.1 53.704 108 41 1 21 119 11 118 5.56e-32 120
MsaG046802 AT5G23000.1 50.459 109 43 1 18 115 8 116 7.01e-32 119
MsaG046802 AT5G55020.1 51.402 107 42 1 22 118 26 132 7.60e-32 122
MsaG046802 AT1G56160.1 48.696 115 49 1 11 115 3 117 1.62e-31 117
MsaG046802 AT1G74650.1 52.294 109 42 1 22 120 12 120 2.03e-31 118
MsaG046802 AT1G74080.1 52.885 104 39 1 21 114 11 114 2.28e-31 118
MsaG046802 AT4G37780.1 49.541 109 44 1 18 115 8 116 2.55e-31 117
MsaG046802 AT5G56110.1 44.444 144 61 4 16 148 9 144 3.26e-31 117
MsaG046802 AT1G66370.1 42.857 168 63 4 17 162 3 159 3.59e-31 115
MsaG046802 AT4G01680.3 53.774 106 39 1 22 117 12 117 4.07e-31 115
MsaG046802 AT4G01680.1 53.774 106 39 1 22 117 12 117 8.61e-31 116
MsaG046802 AT2G36890.1 50.459 109 43 1 18 115 8 116 2.23e-30 114
MsaG046802 AT1G74430.1 53.333 105 39 1 21 115 11 115 2.85e-30 114
MsaG046802 AT2G36890.2 50.459 109 43 1 18 115 49 157 3.44e-30 115
MsaG046802 AT5G65790.1 50.459 109 43 1 18 115 8 116 4.20e-30 115
MsaG046802 AT5G57620.1 49.541 109 44 1 18 115 8 116 5.33e-30 114
MsaG046802 AT5G52260.1 50.000 116 44 2 23 124 13 128 1.23e-29 112
MsaG046802 AT1G79180.2 39.735 151 48 1 11 118 3 153 2.02e-29 112
MsaG046802 AT4G25560.1 51.456 103 40 1 23 115 11 113 2.08e-29 112
MsaG046802 AT3G48920.1 44.538 119 56 1 6 114 2 120 2.71e-29 110
MsaG046802 AT3G28470.1 48.544 103 43 1 18 110 8 110 3.62e-29 112
MsaG046802 AT3G53200.2 59.756 82 30 1 34 115 1 79 5.01e-29 108
MsaG046802 AT4G01680.2 48.305 118 39 1 22 117 12 129 5.18e-29 112
MsaG046802 AT3G49690.1 48.624 109 45 1 18 115 8 116 5.66e-29 111
MsaG046802 AT3G12820.1 48.148 108 46 1 18 115 10 117 1.09e-28 108
MsaG046802 AT1G18710.1 49.524 105 43 1 21 115 11 115 1.38e-27 106
MsaG046802 AT5G26660.2 57.692 78 33 0 45 122 14 91 3.16e-26 104
MsaG046802 AT3G60460.1 41.379 116 55 3 15 119 6 119 4.14e-26 103
MsaG046802 AT5G35550.2 50.485 103 43 1 39 133 44 146 5.44e-26 102
MsaG046802 AT1G56650.1 44.521 146 65 4 13 148 3 142 6.48e-26 101
MsaG046802 AT3G47600.2 57.500 80 32 1 45 122 39 118 9.45e-26 103
MsaG046802 AT5G14750.3 63.235 68 25 0 48 115 18 85 1.71e-25 98.6
MsaG046802 AT1G66380.1 52.381 105 40 1 21 115 7 111 3.07e-25 97.1
MsaG046802 AT3G12820.2 61.765 68 26 0 48 115 2 69 1.41e-24 97.1
MsaG046802 AT1G66390.1 51.327 113 41 2 13 115 3 111 2.83e-24 97.4
MsaG046802 AT2G26950.1 41.748 103 50 1 22 114 16 118 1.52e-23 97.8
MsaG046802 AT5G11050.1 33.166 199 110 5 24 200 105 302 1.66e-22 95.5
MsaG046802 AT3G27785.1 37.500 128 64 2 24 135 189 316 1.87e-21 92.4
MsaG046802 AT3G09370.1 40.000 105 54 1 22 117 128 232 9.73e-21 90.9
MsaG046802 AT3G09370.2 40.000 105 54 1 22 117 133 237 9.75e-21 90.9
MsaG046802 AT3G09370.3 40.000 105 54 1 22 117 141 245 1.15e-20 90.5
MsaG046802 AT4G18770.1 38.596 114 57 2 19 121 212 323 1.21e-20 90.1
MsaG046802 AT5G02320.1 41.748 103 51 1 22 115 125 227 1.33e-20 90.5
MsaG046802 AT5G02320.2 41.748 103 51 1 22 115 125 227 1.33e-20 90.5
MsaG046802 AT5G02320.3 41.748 103 51 1 22 115 65 167 2.51e-20 89.7
MsaG046802 AT2G23290.1 43.137 102 49 1 24 116 13 114 2.92e-20 87.8
MsaG046802 AT5G58850.1 36.975 119 66 1 11 120 92 210 5.42e-20 88.2
MsaG046802 AT3G23250.2 32.919 161 74 4 58 212 1 133 9.05e-20 85.1
MsaG046802 AT1G22640.3 54.930 71 32 0 58 128 1 71 1.68e-19 83.6
MsaG046802 AT5G11510.3 40.777 103 52 1 22 115 79 181 2.97e-19 87.0
MsaG046802 AT5G11510.1 40.777 103 52 1 22 115 79 181 2.97e-19 87.0
MsaG046802 AT5G11510.4 40.777 103 52 1 22 115 79 181 2.97e-19 87.0
MsaG046802 AT5G11510.5 40.777 103 52 1 22 115 79 181 3.31e-19 86.7
MsaG046802 AT5G11510.2 40.777 103 52 1 22 115 79 181 3.47e-19 86.7
MsaG046802 AT4G37260.1 40.179 112 53 2 24 126 13 119 5.87e-19 84.3
MsaG046802 AT1G69560.2 37.069 116 61 3 12 118 114 226 1.09e-18 84.0
MsaG046802 AT1G69560.1 37.069 116 61 3 12 118 98 210 1.15e-18 83.6
MsaG046802 AT3G55730.1 40.000 105 54 2 24 119 56 160 1.17e-18 84.3
MsaG046802 AT4G32730.5 36.893 103 56 1 22 115 85 187 2.01e-18 84.3
MsaG046802 AT4G32730.4 36.893 103 56 1 22 115 85 187 2.01e-18 84.3
MsaG046802 AT4G32730.3 36.893 103 56 1 22 115 85 187 2.01e-18 84.3
MsaG046802 AT4G32730.2 36.893 103 56 1 22 115 85 187 2.01e-18 84.3
MsaG046802 AT3G09230.1 44.000 100 39 2 24 110 55 150 2.04e-18 83.6
MsaG046802 AT1G66380.3 57.746 71 30 0 45 115 8 78 2.27e-18 78.2
MsaG046802 AT4G32730.1 36.893 103 56 1 22 115 85 187 2.65e-18 84.0
MsaG046802 AT5G59780.1 66.667 51 17 0 70 120 1 51 3.02e-18 79.7
MsaG046802 AT1G26780.1 38.679 106 56 2 22 118 96 201 3.31e-18 81.6
MsaG046802 AT1G26780.2 38.679 106 56 2 22 118 96 201 3.52e-18 82.8
MsaG046802 AT5G14750.4 58.621 58 24 0 58 115 1 58 4.60e-18 78.2
MsaG046802 AT5G14750.2 58.621 58 24 0 58 115 1 58 4.60e-18 78.2
MsaG046802 AT2G39880.1 40.385 104 53 2 24 118 50 153 4.69e-18 82.4
MsaG046802 AT3G46130.2 66.667 51 17 0 70 120 1 51 4.90e-18 79.7
MsaG046802 AT3G29020.1 35.577 104 58 2 24 118 65 168 5.71e-18 80.5
MsaG046802 AT3G29020.2 35.577 104 58 2 24 118 67 170 9.55e-18 80.9
MsaG046802 AT1G18960.1 36.134 119 64 3 24 132 10 126 2.13e-17 80.1
MsaG046802 AT5G67300.1 39.604 101 52 1 24 115 6 106 5.88e-17 78.6
MsaG046802 AT5G17800.1 32.540 126 76 1 2 118 71 196 8.20e-17 78.6
MsaG046802 AT1G14350.2 36.364 132 72 3 27 146 28 159 8.81e-17 79.3
MsaG046802 AT1G14350.1 36.364 132 72 3 27 146 28 159 8.81e-17 79.3
MsaG046802 AT1G73410.1 41.346 104 52 2 24 118 6 109 9.92e-17 77.0
MsaG046802 AT1G73410.2 41.346 104 52 2 24 118 6 109 1.08e-16 76.3
MsaG046802 AT1G71030.2 48.611 72 37 0 51 122 5 76 2.42e-16 74.7
MsaG046802 AT3G50060.1 38.614 101 53 1 24 115 6 106 2.53e-16 77.0
MsaG046802 AT1G71030.1 48.611 72 37 0 51 122 19 90 2.60e-16 75.1
MsaG046802 AT1G17950.1 47.887 71 37 0 48 118 38 108 3.69e-16 75.5
MsaG046802 AT2G37630.1 35.849 106 56 1 27 120 7 112 6.29e-16 76.3
MsaG046802 AT4G00540.2 35.043 117 64 1 21 125 100 216 7.03e-16 76.6
MsaG046802 AT4G00540.1 34.454 119 66 1 19 125 96 214 8.58e-16 76.3
MsaG046802 AT5G40360.1 37.234 94 50 1 24 108 158 251 1.21e-15 75.5
MsaG046802 AT5G39700.1 36.066 122 64 4 16 125 48 167 2.58e-15 72.4
MsaG046802 AT4G33450.1 30.556 144 86 3 7 138 1 142 8.13e-15 72.0
MsaG046802 AT2G25230.1 44.444 63 35 0 48 110 59 121 1.73e-14 70.9
MsaG046802 AT2G02820.2 35.000 120 61 2 27 129 33 152 2.12e-14 72.4
MsaG046802 AT2G02820.1 35.000 120 61 2 27 129 33 152 2.56e-14 72.0
MsaG046802 AT2G02820.3 35.000 120 61 2 27 129 33 152 3.50e-14 71.2
MsaG046802 AT1G66380.2 42.857 98 45 2 21 107 7 104 1.83e-13 65.1
MsaG046802 AT5G40430.1 24.022 179 121 3 20 185 50 226 1.47e-12 65.9
MsaG046802 AT4G25560.2 56.522 46 20 0 70 115 2 47 8.61e-12 63.2

Find 0 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
Chromosome Type Strat End Strand Name
Contig1 gene 2439186 2440946 2439186 ID=MsaG046802
Contig1 mRNA 2439186 2440946 2439186 ID=MsaT046802.1;Parent=MsaG046802
Contig1 exon 2439186 2439318 2439186 ID=MsaT046802.1.exon1;Parent=MsaT046802.1
Contig1 CDS 2439186 2439318 2439186 ID=cds.MsaT046802.1;Parent=MsaT046802.1
Contig1 exon 2439459 2439588 2439459 ID=MsaT046802.1.exon2;Parent=MsaT046802.1
Contig1 CDS 2439459 2439588 2439459 ID=cds.MsaT046802.1;Parent=MsaT046802.1
Contig1 exon 2439788 2440140 2439788 ID=MsaT046802.1.exon3;Parent=MsaT046802.1
Contig1 CDS 2439788 2440140 2439788 ID=cds.MsaT046802.1;Parent=MsaT046802.1
Contig1 exon 2440843 2440946 2440843 ID=MsaT046802.1.exon4;Parent=MsaT046802.1
Contig1 CDS 2440843 2440946 2440843 ID=cds.MsaT046802.1;Parent=MsaT046802.1
Gene Sequence

>MsaT046802.1

ATGAGAGGTATGGATATTATTAAGGTTCAGAAAGGTGGGTCTGCAAAGGAAAATGAGACAGGGTTAAGAAAAGGTCCTTGGACATTAGAAGAGGACACCATTCTAGTTGATTACATTACAATACACGGTGAAGGTTTGAGGAGAAGTGGTAAAAGTTGCAGATTAAGGTGGCTAAACTACTTGCGTCCCGATGTACGCCGCGGGAATATCACAGTTCAAGAACAGATATTGATTCTTGACCTCCACTCTCGCTGGGGCAATAGGTGGTCGAAAATTGCACAACATCTTCCGGGAAGAACAGACAATGAAATAAAAAACTATTGGAGAACAAGAGTGATCAAGCAAGCAAAACAGCTCAAGTGTGATGTCAACAGCAAACAATTCAGAGACGTTTTACGTCACGTTTGGATGCCCCGATTGCTCGAACAAATTCAGCCCCCACAACAATTCCCCGACACGAATAATCCAAACGGATCAAATATCCTTCTTCAACAAAACACATCGCAAAGTTCAGTTTCAGGAATCAGTGGTGTTTCCTCGGACTCTTCATCAGTAGAATTCCAAGTTGCTTCAAATTCGGACAAAAATAATTCTTTGGAGCTTTTAGGCCATGAAGGAGCTGTTGGCAGCATTCATGGGTGGGTCCCTACAAAACATTTCCTTTTCATTAATGCTATTTGTCCCGAGAGATGTGTTCCCGACGTTATCACGATGGTGTAA
Protein sequence

>MsaT046802.1

MRGMDIIKVQKGGSAKENETGLRKGPWTLEEDTILVDYITIHGEGLRRSGKSCRLRWLNYLRPDVRRGNITVQEQILILDLHSRWGNRWSKIAQHLPGRTDNEIKNYWRTRVIKQAKQLKCDVNSKQFRDVLRHVWMPRLLEQIQPPQQFPDTNNPNGSNILLQQNTSQSSVSGISGVSSDSSSVEFQVASNSDKNNSLELLGHEGAVGSIHGWVPTKHFLFINAICPERCVPDVITMV*