AlfalfaGEDB | MsaG046902

M. sativa ssp. caerulea / MsaG046902

KEGG: -
GO: GO:0001678 GO:0003674 GO:0003700 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0008150 GO:0009743 GO:0009746 GO:0009749 GO:0009889 GO:0009987 GO:0010033 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0019725 GO:0031323 GO:0031326 GO:0033500 GO:0034284 GO:0042221 GO:0042592 GO:0042593 GO:0042802 GO:0042803 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0046982 GO:0046983 GO:0048878 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0051716 GO:0055082 GO:0060255 GO:0065007 GO:0065008 GO:0070887 GO:0071310 GO:0071322 GO:0071326 GO:0071331 GO:0071333 GO:0080090 GO:0140110 GO:1901700 GO:1901701 GO:1903506 GO:2000112 GO:2001141
PFAM: PF00170.24

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG046902	XP_003588595.1	96.853	286	7	2	1	285	54	338	0.0	558

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG046902	sp\|Q9FUD3\|BZIP9_ARATH	48.627	255	99	7	39	285	46	276	5.07e-61	197

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG046902	tr\|G7I545\|G7I545_MEDTR	96.853	286	7	2	1	285	54	338	0.0	558

TFs/TRs:

Gene ID	Type	Classification
MsaG046902	TF	bZIP

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsaG000033	MsaG046902	0.811602	1.106600e-50	1.965213e-48
MsaG000412	MsaG046902	0.807087	1.018218e-49	1.621226e-47
MsaG000459	MsaG046902	0.802581	8.807855e-49	1.262700e-46
MsaG000717	MsaG046902	0.912087	7.113486e-83	7.706951e-79
MsaG001026	MsaG046902	0.847836	1.698683e-59	8.555990e-57
MsaG001363	MsaG046902	0.805213	2.514764e-49	3.831468e-47
MsaG001468	MsaG046902	0.838521	5.036659e-57	1.877301e-54
MsaG001542	MsaG046902	0.816005	1.198137e-51	2.375816e-49
MsaG001551	MsaG046902	0.842401	4.918934e-58	2.072053e-55
MsaG001730	MsaG046902	0.827519	2.671537e-54	7.207583e-52
MsaG001939	MsaG046902	0.839563	2.713700e-57	1.044898e-54
MsaG002379	MsaG046902	0.855465	1.198800e-61	7.876544e-59
MsaG002469	MsaG046902	0.802206	1.051197e-48	1.494084e-46
MsaG002489	MsaG046902	0.850753	2.640742e-60	1.468822e-57
MsaG002603	MsaG046902	0.844899	1.064175e-58	4.861009e-56
MsaG003420	MsaG046902	0.811075	1.438033e-50	2.521072e-48
MsaG003767	MsaG046902	0.833380	9.998407e-56	3.191680e-53
MsaG003861	MsaG046902	0.874125	1.779140e-67	2.462393e-64
MsaG004006	MsaG046902	0.863469	4.837380e-64	4.300737e-61
MsaG003910	MsaG046902	0.809921	2.546379e-50	4.340158e-48
MsaG003932	MsaG046902	0.831158	3.525771e-55	1.054804e-52
MsaG003936	MsaG046902	0.832189	1.969619e-55	6.072370e-53
MsaG004107	MsaG046902	0.889016	7.729883e-73	2.164711e-69
MsaG004184	MsaG046902	0.829021	1.164796e-54	3.277879e-52
MsaG004382	MsaG046902	0.830231	5.932207e-55	1.728208e-52
MsaG004452	MsaG046902	0.875545	5.874692e-68	8.654902e-65
MsaG004556	MsaG046902	0.819199	2.301000e-52	4.955153e-50
MsaG004819	MsaG046902	0.802820	7.867438e-49	1.134019e-46
MsaG004924	MsaG046902	0.809119	3.778074e-50	6.316274e-48
MsaG005017	MsaG046902	0.814415	2.692700e-51	5.129165e-49
MsaG005060	MsaG046902	0.829526	8.796597e-55	2.511449e-52
MsaG005062	MsaG046902	0.846621	3.645592e-59	1.762609e-56
MsaG005402	MsaG046902	0.811104	1.417805e-50	2.487338e-48
MsaG005423	MsaG046902	0.827747	2.356551e-54	6.398709e-52
MsaG005541	MsaG046902	0.803406	5.959502e-49	8.707127e-47
MsaG005526	MsaG046902	0.826797	3.968791e-54	1.049329e-51
MsaG005603	MsaG046902	0.863251	5.648008e-64	4.978127e-61
MsaG005869	MsaG046902	0.861221	2.356371e-63	1.919257e-60
MsaG005897	MsaG046902	0.811628	1.092231e-50	1.940920e-48
MsaG006030	MsaG046902	0.819837	1.648743e-52	3.610358e-50
MsaG006245	MsaG046902	0.812130	8.502872e-51	1.529693e-48
MsaG006324	MsaG046902	0.800392	2.462208e-48	3.358683e-46
MsaG006471	MsaG046902	0.840549	1.504650e-57	5.975978e-55
MsaG006500	MsaG046902	0.813407	4.480105e-51	8.320819e-49
MsaG006555	MsaG046902	0.820009	1.506388e-52	3.313931e-50
MsaG006620	MsaG046902	0.816299	1.030981e-51	2.059764e-49
MsaG006705	MsaG046902	0.817946	4.412446e-52	9.197164e-50
MsaG006809	MsaG046902	0.853345	4.884650e-61	2.974848e-58
MsaG007091	MsaG046902	0.803572	5.507060e-49	8.077111e-47
MsaG007195	MsaG046902	0.806021	1.705597e-49	2.648078e-47
MsaG007616	MsaG046902	0.816957	7.352393e-52	1.493944e-49
MsaG007630	MsaG046902	0.800013	2.938306e-48	3.974073e-46
MsaG007817	MsaG046902	0.800524	2.315446e-48	3.167859e-46
MsaG008234	MsaG046902	0.836095	2.090219e-56	7.234964e-54
MsaG008561	MsaG046902	0.872416	6.634882e-67	8.522542e-64
MsaG008619	MsaG046902	0.908684	3.135789e-81	2.721893e-77
MsaG009289	MsaG046902	0.819770	1.707255e-52	3.731824e-50
MsaG009648	MsaG046902	0.816533	9.143044e-52	1.837587e-49
MsaG009656	MsaG046902	0.849614	5.488184e-60	2.935997e-57
MsaG010706	MsaG046902	0.800582	2.253165e-48	3.086777e-46
MsaG011175	MsaG046902	0.832734	1.445386e-55	4.527415e-53
MsaG011560	MsaG046902	0.817753	4.875907e-52	1.011241e-49
MsaG011624	MsaG046902	0.809829	2.664530e-50	4.531553e-48
MsaG011831	MsaG046902	0.849879	4.633520e-60	2.500693e-57
MsaG012522	MsaG046902	0.811253	1.316347e-50	2.317786e-48
MsaG012549	MsaG046902	0.871809	1.053476e-66	1.318488e-63
MsaG043725	MsaG046902	0.888420	1.310221e-72	3.558208e-69
MsaG043788	MsaG046902	0.831914	2.301828e-55	7.040446e-53
MsaG043817	MsaG046902	0.820077	1.453830e-52	3.204082e-50
MsaG044117	MsaG046902	0.873320	3.315736e-67	4.429509e-64
MsaG044104	MsaG046902	0.839602	2.651121e-57	1.022009e-54
MsaG044200	MsaG046902	0.871980	9.250172e-67	1.166255e-63
MsaG044661	MsaG046902	0.843711	2.211750e-58	9.716472e-56
MsaG044688	MsaG046902	0.814085	3.181562e-51	6.010384e-49
MsaG044997	MsaG046902	0.817455	5.687415e-52	1.170561e-49
MsaG045284	MsaG046902	0.804375	3.756107e-49	5.612610e-47
MsaG045581	MsaG046902	0.822368	4.331523e-53	1.014510e-50
MsaG045819	MsaG046902	0.895676	1.723338e-75	6.887824e-72
MsaG045832	MsaG046902	0.807025	1.049604e-49	1.668737e-47
MsaG045969	MsaG046902	0.825445	8.292705e-54	2.111719e-51
MsaG046123	MsaG046902	0.802233	1.038152e-48	1.476435e-46
MsaG046173	MsaG046902	0.875165	7.915940e-68	1.146667e-64
MsaG046175	MsaG046902	0.800375	2.481819e-48	3.384102e-46
MsaG046206	MsaG046902	0.815573	1.494683e-51	2.931514e-49
MsaG046306	MsaG046902	0.802145	1.082133e-48	1.535868e-46
MsaG046522	MsaG046902	0.898706	9.322981e-77	4.422072e-73
MsaG046501	MsaG046902	0.875955	4.256284e-68	6.386741e-65
MsaG046503	MsaG046902	0.805219	2.508217e-49	3.821999e-47
MsaG046589	MsaG046902	0.862892	7.285746e-64	6.331470e-61
MsaG046603	MsaG046902	0.808818	4.379259e-50	7.268412e-48
MsaG046902	MsaG046939	0.871442	1.392389e-66	1.715290e-63
MsaG046902	MsaG046927	0.811162	1.377048e-50	2.419306e-48
MsaG046902	MsaG046975	0.869729	5.054819e-66	5.791692e-63
MsaG046902	MsaG047097	0.866588	5.133606e-65	5.169949e-62
MsaG046902	MsaG002654	0.858519	1.522818e-62	1.119681e-59
MsaG046902	MsaG002243	0.808156	6.054421e-50	9.889700e-48
MsaG046902	MsaG000634	0.805598	2.090647e-49	3.213855e-47
MsaG046902	MsaG005167	0.806878	1.126959e-49	1.785545e-47
MsaG046902	MsaG011183	0.835513	2.930762e-56	9.968969e-54
MsaG046902	MsaG006148	0.849055	7.841375e-60	4.115187e-57
MsaG046902	MsaG007536	0.810077	2.357881e-50	4.034092e-48
MsaG046902	MsaG012744	0.830276	5.784098e-55	1.687269e-52
MsaG046902	MsaG013496	0.836870	1.329770e-56	4.711557e-54
MsaG046902	MsaG022046	0.808821	4.373009e-50	7.258541e-48
MsaG046902	MsaG023179	0.819336	2.142551e-52	4.630638e-50
MsaG046902	MsaG018912	0.841267	9.769850e-58	3.969219e-55
MsaG046902	MsaG020128	0.829236	1.033497e-54	2.925972e-52
MsaG046902	MsaG022828	0.860357	4.298876e-63	3.388949e-60
MsaG046902	MsaG019847	0.886836	5.243940e-72	1.314926e-68
MsaG046902	MsaG025092	0.821151	8.259048e-53	1.872684e-50
MsaG046902	MsaG029390	0.867673	2.320261e-65	2.442325e-62
MsaG046902	MsaG026803	0.828163	1.873030e-54	5.145443e-52
MsaG046902	MsaG026407	0.808072	6.305970e-50	1.027988e-47
MsaG046902	MsaG028079	0.840944	1.186934e-57	4.773047e-55
MsaG046902	MsaG033602	0.896191	1.055591e-75	4.341310e-72
MsaG046902	MsaG032886	0.844790	1.138507e-58	5.181283e-56
MsaG046902	MsaG034655	0.857067	4.087190e-62	2.846784e-59
MsaG046902	MsaG033082	0.816219	1.074027e-51	2.141400e-49
MsaG046902	MsaG032525	0.849875	4.644912e-60	2.506489e-57
MsaG046902	MsaG031503	0.806537	1.329240e-49	2.089254e-47
MsaG046902	MsaG030566	0.827743	2.361530e-54	6.411538e-52
MsaG046902	MsaG031847	0.817993	4.306794e-52	8.987822e-50
MsaG046902	MsaG033259	0.811565	1.127061e-50	1.999758e-48
MsaG046902	MsaG036286	0.877314	1.449584e-68	2.312201e-65
MsaG046902	MsaG036043	0.861181	2.423736e-63	1.971076e-60
MsaG046902	MsaG035600	0.833754	8.071293e-56	2.605056e-53
MsaG046902	MsaG036233	0.810310	2.101303e-50	3.615658e-48
MsaG046902	MsaG037531	0.819163	2.344975e-52	5.045119e-50
MsaG046902	MsaG037827	0.811995	9.098086e-51	1.631390e-48
MsaG046902	MsaG036685	0.838760	4.370334e-57	1.641219e-54
MsaG046902	MsaG039797	0.821136	8.323470e-53	1.886556e-50
MsaG046902	MsaG036758	0.848012	1.519773e-59	7.700141e-57
MsaG046902	MsaG037508	0.801712	1.326878e-48	1.864785e-46
MsaG046902	MsaG041442	0.875990	4.140456e-68	6.222965e-65
MsaG046902	MsaG044977	0.822308	4.474066e-53	1.046188e-50
MsaG046902	MsaG044531	0.846173	4.825277e-59	2.298552e-56
MsaG046902	MsaG046854	0.823692	2.135495e-53	5.184046e-51
MsaG012723	MsaG046902	0.839768	2.400368e-57	9.302317e-55
MsaG013271	MsaG046902	0.887153	3.979065e-72	1.013756e-68
MsaG013839	MsaG046902	0.826128	5.719494e-54	1.484428e-51
MsaG014076	MsaG046902	0.814676	2.358435e-51	4.521923e-49
MsaG014855	MsaG046902	0.860327	4.387335e-63	3.454790e-60
MsaG015236	MsaG046902	0.825422	8.398151e-54	2.137133e-51
MsaG015371	MsaG046902	0.851329	1.820855e-60	1.033140e-57
MsaG015871	MsaG046902	0.829743	7.792139e-55	2.238554e-52
MsaG016209	MsaG046902	0.847759	1.783978e-59	8.961922e-57
MsaG016215	MsaG046902	0.853794	3.634949e-61	2.249430e-58
MsaG016327	MsaG046902	0.884033	5.805886e-71	1.269053e-67
MsaG016419	MsaG046902	0.821419	7.169674e-53	1.637167e-50
MsaG016471	MsaG046902	0.863153	6.056978e-64	5.318109e-61
MsaG016884	MsaG046902	0.859931	5.771130e-63	4.475171e-60
MsaG017009	MsaG046902	0.870623	2.584578e-66	3.074284e-63
MsaG017051	MsaG046902	0.834593	4.986309e-56	1.650074e-53
MsaG017068	MsaG046902	0.880523	1.082549e-69	2.002472e-66
MsaG017189	MsaG046902	0.830427	5.317488e-55	1.557780e-52
MsaG017324	MsaG046902	0.806375	1.437807e-49	2.251217e-47
MsaG017431	MsaG046902	0.805448	2.247221e-49	3.442522e-47
MsaG017644	MsaG046902	0.851643	1.484852e-60	8.517475e-58
MsaG017699	MsaG046902	0.827368	2.901990e-54	7.796397e-52
MsaG017827	MsaG046902	0.837961	7.008495e-57	2.567378e-54
MsaG017828	MsaG046902	0.818638	3.081198e-52	6.538344e-50
MsaG017954	MsaG046902	0.877240	1.537532e-68	2.444310e-65
MsaG017983	MsaG046902	0.888582	1.135809e-72	3.111018e-69
MsaG018035	MsaG046902	0.813983	3.351069e-51	6.314348e-49
MsaG018054	MsaG046902	0.814153	3.073881e-51	5.816785e-49
MsaG018085	MsaG046902	0.824636	1.285059e-53	3.200474e-51
MsaG018169	MsaG046902	0.833010	1.235221e-55	3.900221e-53
MsaG018223	MsaG046902	0.811875	9.658686e-51	1.726848e-48
MsaG018754	MsaG046902	0.802976	7.306267e-49	1.056952e-46
MsaG019120	MsaG046902	0.850377	3.364741e-60	1.847242e-57
MsaG019160	MsaG046902	0.832941	1.284440e-55	4.047632e-53
MsaG019223	MsaG046902	0.872361	6.918308e-67	8.866194e-64
MsaG019285	MsaG046902	0.829501	8.918857e-55	2.544600e-52
MsaG019466	MsaG046902	0.823167	2.829371e-53	6.770963e-51
MsaG019491	MsaG046902	0.847331	2.334937e-59	1.156148e-56
MsaG019526	MsaG046902	0.811334	1.264704e-50	2.231282e-48
MsaG019527	MsaG046902	0.877405	1.348452e-68	2.159567e-65
MsaG019638	MsaG046902	0.802541	8.978104e-49	1.285912e-46
MsaG019649	MsaG046902	0.817826	4.696489e-52	9.758830e-50
MsaG019907	MsaG046902	0.841601	7.986964e-58	3.279424e-55
MsaG019936	MsaG046902	0.810918	1.555142e-50	2.715807e-48
MsaG020021	MsaG046902	0.879940	1.744114e-69	3.138345e-66
MsaG020321	MsaG046902	0.825482	8.128946e-54	2.072109e-51
MsaG020382	MsaG046902	0.852251	9.996670e-61	5.858496e-58
MsaG020733	MsaG046902	0.877530	1.220151e-68	1.965498e-65
MsaG021222	MsaG046902	0.814892	2.114115e-51	4.075626e-49
MsaG021515	MsaG046902	0.824812	1.168100e-53	2.923274e-51
MsaG021882	MsaG046902	0.811010	1.485281e-50	2.599688e-48
MsaG022811	MsaG046902	0.892387	3.695850e-74	1.235775e-70
MsaG022899	MsaG046902	0.824783	1.186856e-53	2.967865e-51
MsaG023188	MsaG046902	0.887534	2.853181e-72	7.411957e-69
MsaG023563	MsaG046902	0.818070	4.138963e-52	8.654616e-50
MsaG023649	MsaG046902	0.842823	3.805975e-58	1.624951e-55
MsaG023711	MsaG046902	0.860360	4.288328e-63	3.381076e-60
MsaG023716	MsaG046902	0.856773	4.984261e-62	3.434530e-59
MsaG023729	MsaG046902	0.849236	6.989342e-60	3.690712e-57
MsaG023756	MsaG046902	0.807910	6.825043e-50	1.108319e-47
MsaG023793	MsaG046902	0.868647	1.130742e-65	1.238703e-62
MsaG023834	MsaG046902	0.861464	1.988437e-63	1.634622e-60
MsaG023861	MsaG046902	0.879185	3.222243e-69	5.601508e-66
MsaG024134	MsaG046902	0.839870	2.258820e-57	8.782381e-55
MsaG024295	MsaG046902	0.817190	6.521275e-52	1.333075e-49
MsaG024480	MsaG046902	0.830483	5.153503e-55	1.512074e-52
MsaG025067	MsaG046902	0.814520	2.553273e-51	4.876283e-49
MsaG025143	MsaG046902	0.882381	2.327399e-70	4.697007e-67
MsaG025153	MsaG046902	0.806445	1.390022e-49	2.180059e-47
MsaG025641	MsaG046902	0.830231	5.934253e-55	1.728767e-52
MsaG026475	MsaG046902	0.804768	3.113737e-49	4.695190e-47
MsaG026686	MsaG046902	0.872609	5.720827e-67	7.410287e-64
MsaG026692	MsaG046902	0.832863	1.343055e-55	4.222559e-53
MsaG026786	MsaG046902	0.812985	5.538640e-51	1.017880e-48
MsaG027170	MsaG046902	0.863539	4.605337e-64	4.105672e-61
MsaG027198	MsaG046902	0.863145	6.090374e-64	5.345986e-61
MsaG027207	MsaG046902	0.872107	8.399009e-67	1.064715e-63
MsaG027210	MsaG046902	0.887882	2.102518e-72	5.559127e-69
MsaG027291	MsaG046902	0.812485	7.119965e-51	1.292300e-48
MsaG027483	MsaG046902	0.887403	3.199732e-72	8.258983e-69
MsaG027511	MsaG046902	0.815143	1.860366e-51	3.609159e-49
MsaG027572	MsaG046902	0.827305	3.004399e-54	8.057196e-52
MsaG027738	MsaG046902	0.818414	3.462811e-52	7.305244e-50
MsaG027828	MsaG046902	0.901441	6.182231e-78	3.443027e-74
MsaG027807	MsaG046902	0.826409	4.906217e-54	1.283310e-51
MsaG027963	MsaG046902	0.859212	9.474574e-63	7.149355e-60
MsaG027987	MsaG046902	0.817774	4.824318e-52	1.001091e-49
MsaG028028	MsaG046902	0.861575	1.840034e-63	1.519049e-60
MsaG028191	MsaG046902	0.838297	5.748110e-57	2.127616e-54
MsaG028193	MsaG046902	0.809263	3.520247e-50	5.905374e-48
MsaG028211	MsaG046902	0.877402	1.351743e-68	2.164605e-65
MsaG028335	MsaG046902	0.840775	1.313582e-57	5.254158e-55
MsaG028420	MsaG046902	0.885206	2.139980e-71	4.951873e-68
MsaG028531	MsaG046902	0.872806	4.920097e-67	6.427226e-64
MsaG028781	MsaG046902	0.803422	5.914934e-49	8.645141e-47
MsaG028814	MsaG046902	0.815160	1.844708e-51	3.580303e-49
MsaG029048	MsaG046902	0.840682	1.389498e-57	5.541551e-55
MsaG029141	MsaG046902	0.813829	3.622360e-51	6.799416e-49
MsaG029091	MsaG046902	0.835946	2.279037e-56	7.853433e-54
MsaG029212	MsaG046902	0.806694	1.231887e-49	1.943434e-47
MsaG029307	MsaG046902	0.808681	4.683630e-50	7.748213e-48
MsaG029561	MsaG046902	0.822802	3.438841e-53	8.149091e-51
MsaG029546	MsaG046902	0.880716	9.239400e-70	1.724602e-66
MsaG029579	MsaG046902	0.810198	2.220707e-50	3.810599e-48
MsaG029953	MsaG046902	0.884756	3.141761e-71	7.109155e-68
MsaG031129	MsaG046902	0.909862	8.600305e-82	8.047359e-78
MsaG032115	MsaG046902	0.806716	1.219129e-49	1.924241e-47
MsaG032848	MsaG046902	0.901448	6.140373e-78	3.421296e-74
MsaG032901	MsaG046902	0.840982	1.159925e-57	4.669991e-55
MsaG032915	MsaG046902	0.808891	4.224935e-50	7.024707e-48
MsaG033051	MsaG046902	0.804981	2.811340e-49	4.260237e-47
MsaG034217	MsaG046902	0.815911	1.257684e-51	2.487943e-49
MsaG034108	MsaG046902	0.836556	1.597561e-56	5.607018e-54
MsaG034514	MsaG046902	0.807539	8.176572e-50	1.315957e-47
MsaG034590	MsaG046902	0.818457	3.386168e-52	7.151480e-50
MsaG034836	MsaG046902	0.834179	6.328281e-56	2.068220e-53
MsaG035984	MsaG046902	0.813979	3.357583e-51	6.326026e-49
MsaG036065	MsaG046902	0.840183	1.873361e-57	7.355216e-55
MsaG036279	MsaG046902	0.816417	9.701876e-52	1.944132e-49
MsaG036335	MsaG046902	0.848569	1.068095e-59	5.513240e-57
MsaG036447	MsaG046902	0.826086	5.852400e-54	1.517140e-51
MsaG039734	MsaG046902	0.804108	4.265960e-49	6.335389e-47
MsaG040270	MsaG046902	0.837355	1.001149e-56	3.599829e-54
MsaG040504	MsaG046902	0.883163	1.210075e-70	2.536174e-67
MsaG040577	MsaG046902	0.879546	2.402506e-69	4.247133e-66
MsaG040600	MsaG046902	0.850408	3.297699e-60	1.812360e-57
MsaG041754	MsaG046902	0.881262	5.893070e-70	1.127997e-66
MsaG041800	MsaG046902	0.870045	3.991922e-66	4.634868e-63

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG046902	MtrunA17_Chr1g0147491	96.853	286	7	2	1	285	54	338	0.0	558
MsaG046902	MtrunA17_Chr3g0139301	62.105	285	76	13	10	285	33	294	1.96e-99	293
MsaG046902	MtrunA17_Chr1g0190761	52.857	140	62	2	71	206	161	300	6.24e-28	111
MsaG046902	MtrunA17_Chr3g0139571	78.378	74	16	0	117	190	1	74	2.67e-26	99.0
MsaG046902	MtrunA17_Chr7g0274141	52.027	148	54	4	64	206	150	285	3.33e-26	106
MsaG046902	MtrunA17_Chr3g0144941	41.558	77	45	0	115	191	27	103	8.33e-12	62.0
MsaG046902	MtrunA17_Chr1g0155551	29.747	158	96	2	90	247	3	145	8.83e-12	62.4
MsaG046902	MtrunA17_Chr7g0225661	39.474	114	62	2	77	190	50	156	1.97e-11	62.0
MsaG046902	MtrunA17_Chr6g0456061	40.385	104	56	3	103	205	77	175	2.23e-11	62.0
MsaG046902	MtrunA17_Chr8g0341311	43.478	92	47	1	99	190	60	146	2.27e-11	61.6
MsaG046902	MtrunA17_Chr8g0378901	34.884	86	56	0	112	197	29	114	2.63e-11	60.8

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG046902	AT5G24800.1	48.627	255	99	7	39	285	46	276	5.16e-62	197
MsaG046902	AT5G28770.1	58.333	108	43	1	102	207	130	237	4.86e-25	102
MsaG046902	AT5G28770.2	58.333	108	43	1	102	207	137	244	5.85e-25	102
MsaG046902	AT5G28770.3	61.111	90	35	0	102	191	137	226	7.36e-21	89.7
MsaG046902	AT4G02640.3	46.970	132	68	1	72	201	175	306	5.48e-16	77.8
MsaG046902	AT4G02640.4	46.970	132	68	1	72	201	169	300	5.51e-16	77.8
MsaG046902	AT4G02640.2	46.970	132	68	1	72	201	175	306	6.11e-16	77.8
MsaG046902	AT4G02640.1	46.970	132	68	1	72	201	169	300	6.38e-16	77.8
MsaG046902	AT3G54620.1	51.136	88	43	0	114	201	227	314	1.75e-13	70.5
MsaG046902	AT1G75390.1	39.759	83	50	0	115	197	38	120	5.96e-12	63.5
MsaG046902	AT2G18160.1	36.190	105	57	1	93	197	16	110	1.46e-11	62.4
MsaG046902	AT3G30530.1	39.773	88	53	0	103	190	66	153	3.19e-11	61.2
MsaG046902	AT1G75390.2	44.776	67	37	0	115	181	38	104	8.26e-11	58.9

Find 0 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content

Chromosome	Type	Strat	End	Strand	Name
Contig3	gene	480797	486092	480797	ID=MsaG046902
Contig3	mRNA	480797	486092	480797	ID=MsaT046902.1;Parent=MsaG046902
Contig3	exon	480797	480868	480797	ID=MsaT046902.1.exon1;Parent=MsaT046902.1
Contig3	CDS	480797	480868	480797	ID=cds.MsaT046902.1;Parent=MsaT046902.1
Contig3	exon	483356	483485	483356	ID=MsaT046902.1.exon2;Parent=MsaT046902.1
Contig3	CDS	483356	483485	483356	ID=cds.MsaT046902.1;Parent=MsaT046902.1
Contig3	exon	484282	484444	484282	ID=MsaT046902.1.exon3;Parent=MsaT046902.1
Contig3	CDS	484282	484444	484282	ID=cds.MsaT046902.1;Parent=MsaT046902.1
Contig3	exon	485150	485225	485150	ID=MsaT046902.1.exon4;Parent=MsaT046902.1
Contig3	CDS	485150	485225	485150	ID=cds.MsaT046902.1;Parent=MsaT046902.1
Contig3	exon	485356	485481	485356	ID=MsaT046902.1.exon5;Parent=MsaT046902.1
Contig3	CDS	485356	485481	485356	ID=cds.MsaT046902.1;Parent=MsaT046902.1
Contig3	exon	485799	486092	485799	ID=MsaT046902.1.exon6;Parent=MsaT046902.1
Contig3	CDS	485799	486092	485799	ID=cds.MsaT046902.1;Parent=MsaT046902.1

Gene Sequence

>MsaT046902.1

ATGGATCCATTCATCGGTGTCGGCGATGTTTGCTCTGGTAACATCGCCGACACCGCCGATTTTCATAATCTGGATGCCGTAACTTCATTTTCAACATGTGGTGAACCAACAAATAATACTCTTGTTTGCTCCCAAAACCTCACTCCCAAGAACTCCACCATCACTGCAACTATTGAGTCTCAATCATCCATTTCTGCCACCGTTACAAGTCCAGTGTCAGCTAATAAACCAAGCAGTAGAGAAAATCAAACCAAAGGAGTGACTACAACAACAAGTGGTTCCTCACGTGATCCATCTGATGAAGATGATGAAGCAGGTCCTTGTGAACAAAGTACAAACCCTGTTGATATGAAGCGTCTTAGAAGGAAGGTTTCTAATCGCGAGTCTGCCAGAAGGTCCAGAAGAAGAAAACAAGCACATTTGGCAGACCTTGAGGTTCAGGTTGAACAGCTGAGGCTGGAAAATGCAAGCCTATTTAAGCAGCTTACAGATGCCAGCCAACAATTTCGCGATGCTAACACTAACAACCGAGTGCTAAAATCCGATGTTGAAGCTTTAAGAGCTAAGGTGAAGTTAGCAGAGGATATGGTCTCTAGGGGTACTTTACCTACTTTTAACAACCAGCTTCTCCAAAATCAGAGTCAATTGAACACCACTCCGCCACAAATCAACACTAGTAATCTCCGTTGTATGGCGCATGTTTCGCCTACAATCACCGTCCATGGAAACGACGCTTCATATGGTGTTAGTGGACAGAATTCAGCTATTGGACTTGGAGATTTTGATATATCTTGCAGTCATGATTTCAACAATGGAGTTAATAGTGATGCTGTGAGCTCTTTGACTAGCTTATGGTCATAA

Protein sequence

>MsaT046902.1

MDPFIGVGDVCSGNIADTADFHNLDAVTSFSTCGEPTNNTLVCSQNLTPKNSTITATIESQSSISATVTSPVSANKPSSRENQTKGVTTTTSGSSRDPSDEDDEAGPCEQSTNPVDMKRLRRKVSNRESARRSRRRKQAHLADLEVQVEQLRLENASLFKQLTDASQQFRDANTNNRVLKSDVEALRAKVKLAEDMVSRGTLPTFNNQLLQNQSQLNTTPPQINTSNLRCMAHVSPTITVHGNDASYGVSGQNSAIGLGDFDISCSHDFNNGVNSDAVSSLTSLWS*