Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Gene ID | Type | Classification |
---|---|---|
Msa0004220 | TR | IWS1 |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0004220 | MtrunA17_Chr1g0156791 | 97.255 | 1020 | 28 | 0 | 1 | 1020 | 1 | 1020 | 0.0 | 2034 |
Msa0004220 | MtrunA17_Chr6g0451341 | 29.842 | 506 | 228 | 29 | 599 | 1020 | 1127 | 1589 | 1.59e-16 | 85.5 |
Msa0004220 | MtrunA17_Chr6g0451341 | 34.667 | 150 | 90 | 5 | 1 | 148 | 254 | 397 | 7.46e-14 | 76.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0004220 | AT4G24200.2 | 39.487 | 585 | 283 | 25 | 472 | 1020 | 451 | 1000 | 6.68e-71 | 256 |
Msa0004220 | AT4G24200.1 | 39.487 | 585 | 283 | 25 | 472 | 1020 | 451 | 1000 | 6.68e-71 | 256 |
Msa0004220 | AT3G48060.1 | 27.976 | 504 | 237 | 25 | 599 | 1007 | 1135 | 1607 | 1.38e-15 | 82.8 |
Msa0004220 | AT3G48060.3 | 27.976 | 504 | 237 | 25 | 599 | 1007 | 1135 | 1607 | 1.38e-15 | 82.8 |
Msa0004220 | AT3G48060.2 | 27.976 | 504 | 237 | 25 | 599 | 1007 | 1136 | 1608 | 1.42e-15 | 82.8 |
Msa0004220 | AT3G48050.1 | 27.843 | 510 | 232 | 27 | 599 | 1007 | 1133 | 1607 | 1.68e-15 | 82.4 |
Msa0004220 | AT3G48050.2 | 27.843 | 510 | 232 | 27 | 599 | 1007 | 1133 | 1607 | 1.68e-15 | 82.4 |
Find 253 sgRNAs with CRISPR-Local
Find 293 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCAGGAGCTGGTGGCGTTTC+AGG | 0.062744 | 1_1:+6671518 | Msa0004220:CDS |
TGCTCCTGCAATATCGATTT+TGG | 0.128104 | 1_1:+6671397 | Msa0004220:CDS |
GAATCTTCAGGCTTGCCTTC+TGG | 0.146600 | 1_1:+6671083 | Msa0004220:CDS |
AAGAGCATGTTCCTCAAATT+TGG | 0.207541 | 1_1:+6671444 | Msa0004220:CDS |
GTACTTTCAAACTGATTTAC+TGG | 0.207850 | 1_1:+6671316 | Msa0004220:CDS |
GGTCACAATGTTAGCGCTTC+TGG | 0.217592 | 1_1:-6670376 | None:intergenic |
GATTCAGGCTTAGGATTTAT+TGG | 0.225150 | 1_1:-6669886 | None:intergenic |
TTTGATCTTAATGAAGAATA+TGG | 0.251619 | 1_1:+6670756 | Msa0004220:CDS |
AATAGTGCCTGAATCTTCTT+TGG | 0.260722 | 1_1:+6669957 | Msa0004220:CDS |
AATCTTCAGGCTTGCCTTCT+GGG | 0.262552 | 1_1:+6671084 | Msa0004220:CDS |
CCAGCCATGCTCATAATATA+TGG | 0.269350 | 1_1:-6671740 | None:intergenic |
AAGAAAATCTTGCCTTTGTT+TGG | 0.283515 | 1_1:-6671006 | None:intergenic |
ATGGAAGGGCAGCTCTTCTT+TGG | 0.286429 | 1_1:+6671206 | Msa0004220:CDS |
AAGTTCAATTTCAGAATTCT+TGG | 0.310934 | 1_1:-6670397 | None:intergenic |
TTAACATTAGCAGCCTTATC+TGG | 0.317575 | 1_1:-6669589 | None:intergenic |
TTCAATACTTGAAGAAGATT+TGG | 0.318707 | 1_1:-6671351 | None:intergenic |
TCTGAAATTGAACTTGACTA+TGG | 0.321868 | 1_1:+6670405 | Msa0004220:CDS |
TCTTTGGAAGAAATGGCTAT+TGG | 0.327878 | 1_1:+6671222 | Msa0004220:CDS |
TCTTCAAGTATTGAAGTATA+TGG | 0.328883 | 1_1:+6671359 | Msa0004220:CDS |
TCTGACATGGAACTTGATTA+TGG | 0.330891 | 1_1:+6670240 | Msa0004220:CDS |
TCAAAACCTGCACAGACTTC+AGG | 0.334253 | 1_1:+6670843 | Msa0004220:CDS |
TCCAAGTCAGGGATGCATTC+TGG | 0.341426 | 1_1:-6670669 | None:intergenic |
CTTCAACAATCCTCAAGTTC+AGG | 0.342590 | 1_1:+6671911 | Msa0004220:CDS |
GTCCTTCTAATTGAATAAAA+AGG | 0.346830 | 1_1:-6669153 | None:intergenic |
GGCTCAACAGCCTTGCCATT+TGG | 0.349494 | 1_1:-6671473 | None:intergenic |
AACTCGGGTTTCATGATTGA+TGG | 0.353921 | 1_1:+6671815 | Msa0004220:CDS |
GAAAGTGAATTGACATCGTC+TGG | 0.354075 | 1_1:+6669733 | Msa0004220:CDS |
AAACAAATTGGTGAATCTTC+AGG | 0.355173 | 1_1:+6671071 | Msa0004220:CDS |
AAAGAAGATTCAGGCACTAT+TGG | 0.361886 | 1_1:-6669955 | None:intergenic |
CAGCTCTTCTTTGGAAGAAA+TGG | 0.365649 | 1_1:+6671215 | Msa0004220:CDS |
AAAGGCCCTCCAGAGAAATT+AGG | 0.368746 | 1_1:+6669859 | Msa0004220:CDS |
ATTGGTGCTCCTAATTTCTC+TGG | 0.369387 | 1_1:-6669868 | None:intergenic |
TATTGCAGGAGCATCTGATT+TGG | 0.372446 | 1_1:-6671387 | None:intergenic |
TGAGATTCTTATCAATCATA+TGG | 0.372514 | 1_1:-6669456 | None:intergenic |
CAAATTTGGTCTTTGCCAAA+TGG | 0.377269 | 1_1:+6671458 | Msa0004220:CDS |
GGAAACTTTGCTCTGTTTGA+AGG | 0.378573 | 1_1:-6670355 | None:intergenic |
TCAATAATGTTGGGGCTTGT+CGG | 0.380965 | 1_1:-6670210 | None:intergenic |
TGTGATAAAGTAATAGTTCC+TGG | 0.384169 | 1_1:+6670012 | Msa0004220:CDS |
GAACTCTTGTCAATAATGTT+GGG | 0.387120 | 1_1:-6670219 | None:intergenic |
GCCAGTTGTCTTCAGTGAAC+GGG | 0.388066 | 1_1:+6669488 | Msa0004220:CDS |
GATGAACTGGCAAAACAAAT+TGG | 0.391064 | 1_1:+6671059 | Msa0004220:CDS |
CAGGAGCTGGTGGCGTTTCA+GGG | 0.395704 | 1_1:+6671519 | Msa0004220:CDS |
TCTTTGAAACTTCCTTGTTT+CGG | 0.396161 | 1_1:-6669775 | None:intergenic |
AGCTGGTGGCGTTTCAGGGA+TGG | 0.404802 | 1_1:+6671523 | Msa0004220:CDS |
CTCCGGTAGTACCTCAAGTT+GGG | 0.406048 | 1_1:+6671678 | Msa0004220:CDS |
GACCGTGGTTCATTGATAGA+TGG | 0.406642 | 1_1:+6669173 | Msa0004220:CDS |
AGATGCTAAGTCTCATGATA+TGG | 0.410271 | 1_1:+6669417 | Msa0004220:CDS |
TCATGTTCCAAAGAAGATTC+AGG | 0.415078 | 1_1:-6669964 | None:intergenic |
AAGTCTCATGATATGGATAC+TGG | 0.415945 | 1_1:+6669424 | Msa0004220:CDS |
GAATTAGATTTGAATAGTAT+TGG | 0.417428 | 1_1:+6671149 | Msa0004220:CDS |
GTTCATATGTTGCAACTTGA+TGG | 0.418052 | 1_1:+6669526 | Msa0004220:CDS |
GCTGGTGGCGTTTCAGGGAT+GGG | 0.419252 | 1_1:+6671524 | Msa0004220:CDS |
AGGTATCGGTGTTGTAGATA+TGG | 0.420582 | 1_1:-6670808 | None:intergenic |
GAGCAGGAACTAAATGATAA+AGG | 0.420968 | 1_1:+6669841 | Msa0004220:CDS |
AAACTTCCTTGTTTCGGTAC+AGG | 0.423549 | 1_1:-6669769 | None:intergenic |
TTCAGCGGAGTTGCTTTGTC+TGG | 0.423774 | 1_1:-6670595 | None:intergenic |
CCTGAAACGCCACCAGCTCC+TGG | 0.426886 | 1_1:-6671518 | None:intergenic |
GGTACACAGCTTGGTTTAAA+CGG | 0.427299 | 1_1:+6671761 | Msa0004220:CDS |
CCTCTTGAGTCCACCATGTA+AGG | 0.431827 | 1_1:-6671653 | None:intergenic |
CCATCCTCTGATCTGAAGGT+TGG | 0.433939 | 1_1:-6671187 | None:intergenic |
AACTGCGAAGACTCCAAGTC+AGG | 0.434097 | 1_1:-6670681 | None:intergenic |
TCGCCAGCCGCGTATGGATC+AGG | 0.434737 | 1_1:+6671620 | Msa0004220:CDS |
CATCCTCTGATCTGAAGGTT+GGG | 0.434962 | 1_1:-6671186 | None:intergenic |
CGTCGCCGTGATTAGAAACT+TGG | 0.436512 | 1_1:-6670146 | None:intergenic |
CACAACCCCTTCTCGAGTGC+GGG | 0.436686 | 1_1:+6669009 | Msa0004220:CDS |
GCACCAACAGAAACAGATTC+AGG | 0.440066 | 1_1:-6669901 | None:intergenic |
ACTTTGACTGAGATGAAAGA+TGG | 0.442066 | 1_1:+6668983 | Msa0004220:CDS |
GCCACTGTAAGTAACCTTCT+TGG | 0.442723 | 1_1:+6669325 | Msa0004220:CDS |
AGAACTCTTGTCAATAATGT+TGG | 0.444898 | 1_1:-6670220 | None:intergenic |
CAGCCATGCTCATAATATAT+GGG | 0.450624 | 1_1:-6671739 | None:intergenic |
TTTGACAAGTGGAAAGAAGT+TGG | 0.454663 | 1_1:+6669388 | Msa0004220:CDS |
ACAGAAACAGATTCAGGCTT+AGG | 0.456277 | 1_1:-6669895 | None:intergenic |
GGGGCTGAGCGTAAGATGAT+AGG | 0.457202 | 1_1:-6671718 | None:intergenic |
AGAACAGAGCTATGGAAGAT+AGG | 0.458167 | 1_1:+6671885 | Msa0004220:CDS |
AAGTGGAAAGAAGTTGGAAA+TGG | 0.459088 | 1_1:+6669394 | Msa0004220:CDS |
CCCCGTTCACTGAAGACAAC+TGG | 0.460330 | 1_1:-6669489 | None:intergenic |
GCCAGAATGCATCCCTGACT+TGG | 0.466600 | 1_1:+6670668 | Msa0004220:CDS |
GAAGGAATCAGAACTATTTG+AGG | 0.468412 | 1_1:-6670337 | None:intergenic |
TCCCAACTTTGATCTTAACT+CGG | 0.470352 | 1_1:+6671799 | Msa0004220:CDS |
ACCCGAGTTAAGATCAAAGT+TGG | 0.470545 | 1_1:-6671801 | None:intergenic |
TGCTGATGTTTGTAGCCAAA+TGG | 0.472264 | 1_1:-6671983 | None:intergenic |
GGTTGGGAAACATATCCATT+TGG | 0.474328 | 1_1:+6671968 | Msa0004220:CDS |
CTACAGTTTGAAGGAACGCT+TGG | 0.475273 | 1_1:+6670882 | Msa0004220:CDS |
ACAGCCCCTCTACAGTTTGA+AGG | 0.475325 | 1_1:+6670873 | Msa0004220:CDS |
GTTTCCCAACCGCTACCATC+TGG | 0.477770 | 1_1:-6671956 | None:intergenic |
TCATTTAACTGTAAATCATC+AGG | 0.478423 | 1_1:-6669802 | None:intergenic |
TTCAACAATCCTCAAGTTCA+GGG | 0.479017 | 1_1:+6671912 | Msa0004220:CDS |
ACTGAAGCTTTAGATAGTTG+TGG | 0.480850 | 1_1:-6670105 | None:intergenic |
ATTGCTAGAATCTGTGGCTC+TGG | 0.481896 | 1_1:-6670082 | None:intergenic |
CCATATATTATGAGCATGGC+TGG | 0.483020 | 1_1:+6671740 | Msa0004220:CDS |
AAAAGAATCAGAGCCATTTG+AGG | 0.484474 | 1_1:-6670172 | None:intergenic |
AGTAAATCAGTTTGAAAGTA+CGG | 0.485029 | 1_1:-6671314 | None:intergenic |
TTGAATAGTATTGGTGATGA+TGG | 0.487137 | 1_1:+6671158 | Msa0004220:CDS |
TCTTGCTCTATCTTGAACCT+TGG | 0.489350 | 1_1:-6669359 | None:intergenic |
AGTGAGAAGCTAATTTCATC+AGG | 0.491477 | 1_1:+6669295 | Msa0004220:CDS |
CCCTTCTCGAGTGCGGGAGT+TGG | 0.492109 | 1_1:+6669015 | Msa0004220:CDS |
TTTGGCAAAGACCAAATTTG+AGG | 0.492121 | 1_1:-6671455 | None:intergenic |
CTGAACTTGAGGATTGTTGA+AGG | 0.492765 | 1_1:-6671910 | None:intergenic |
CCTTCCATCCTCTGATCTGA+AGG | 0.493211 | 1_1:-6671191 | None:intergenic |
ACTGAAGCAGCTCAAGATCC+AGG | 0.493389 | 1_1:+6670705 | Msa0004220:CDS |
AAGAAGATTTGGTAGGCCCT+TGG | 0.495044 | 1_1:-6671340 | None:intergenic |
GGCACTATTGGTGCAGGCAC+AGG | 0.495570 | 1_1:-6669943 | None:intergenic |
CAGCTTGGTTTAAACGGTGT+TGG | 0.495798 | 1_1:+6671767 | Msa0004220:CDS |
AGCATGGCTGGTACACAGCT+TGG | 0.499968 | 1_1:+6671752 | Msa0004220:CDS |
CTTTGTCTGGATGACACCTC+GGG | 0.502499 | 1_1:-6670582 | None:intergenic |
TCCACTGATGATTGCCCAGA+AGG | 0.506454 | 1_1:-6671098 | None:intergenic |
CAGAAGAATGTTTCTGCTGG+TGG | 0.507286 | 1_1:+6670969 | Msa0004220:CDS |
CTTATCAATGAAGGAGGAGC+AGG | 0.507424 | 1_1:+6669825 | Msa0004220:CDS |
GGCAATCCTGAAGTCTGTGC+AGG | 0.508998 | 1_1:-6670849 | None:intergenic |
CTTTGACTGAGATGAAAGAT+GGG | 0.510506 | 1_1:+6668984 | Msa0004220:CDS |
GCCACCAACCCCTGAACTTG+AGG | 0.517663 | 1_1:-6671921 | None:intergenic |
CCCAACTTTGATCTTAACTC+GGG | 0.520919 | 1_1:+6671800 | Msa0004220:CDS |
CGGGTTTCATGATTGATGGC+GGG | 0.521501 | 1_1:+6671819 | Msa0004220:CDS |
TGGCGATGCAATAAGACAAT+GGG | 0.521998 | 1_1:+6669081 | Msa0004220:CDS |
GCGTTCCTTCAAACTGTAGA+GGG | 0.522910 | 1_1:-6670878 | None:intergenic |
CCACCTGATCCATACGCGGC+TGG | 0.523562 | 1_1:-6671623 | None:intergenic |
AAGCCTGAATCTGTTTCTGT+TGG | 0.524255 | 1_1:+6669898 | Msa0004220:CDS |
GGTGCTCCTAATTTCTCTGG+AGG | 0.525103 | 1_1:-6669865 | None:intergenic |
TTCATATGTTGCAACTTGAT+GGG | 0.525474 | 1_1:+6669527 | Msa0004220:CDS |
GATGTCAAAAGCAGTGAAGT+TGG | 0.525752 | 1_1:+6669985 | Msa0004220:CDS |
GTTAAATGACTTATCAATGA+AGG | 0.527736 | 1_1:+6669816 | Msa0004220:CDS |
TTGGTCTTTGCCAAATGGCA+AGG | 0.528902 | 1_1:+6671463 | Msa0004220:CDS |
AAGGAACGCTTGGATGGAAA+GGG | 0.529359 | 1_1:+6670892 | Msa0004220:CDS |
GTAAGATGATAGGACATTTG+AGG | 0.529359 | 1_1:-6671708 | None:intergenic |
GAAGCAGAGACAACAGGTAT+CGG | 0.532277 | 1_1:-6670822 | None:intergenic |
ACATTCATATGCCTTTCCTC+AGG | 0.532717 | 1_1:-6670624 | None:intergenic |
GAAGGTGGAACGAGGCAAGC+TGG | 0.534105 | 1_1:+6670513 | Msa0004220:CDS |
CACGGCGACGATACCTCAAA+TGG | 0.534538 | 1_1:+6670159 | Msa0004220:CDS |
GCTCCGGTAGTACCTCAAGT+TGG | 0.535810 | 1_1:+6671677 | Msa0004220:CDS |
TCCTCAAGTTCAGGGGTTGG+TGG | 0.537669 | 1_1:+6671920 | Msa0004220:CDS |
TGATGCAGGACGAAAGGCAC+TGG | 0.538116 | 1_1:-6670925 | None:intergenic |
ACGAAAGGCACTGGTGGCAG+CGG | 0.538807 | 1_1:-6670916 | None:intergenic |
GAAGGAACGCTTGGATGGAA+AGG | 0.538921 | 1_1:+6670891 | Msa0004220:CDS |
AGAACCAGATGGTAGCGGTT+GGG | 0.543187 | 1_1:+6671952 | Msa0004220:CDS |
GGTGGACTCAAGAGGAGCTC+CGG | 0.543800 | 1_1:+6671661 | Msa0004220:CDS |
CCTTCAGATCAGAGGATGGA+AGG | 0.544949 | 1_1:+6671191 | Msa0004220:CDS |
GAATGATTGTAGGATACCGC+AGG | 0.545072 | 1_1:-6671548 | None:intergenic |
TCACAACCCCTTCTCGAGTG+CGG | 0.546103 | 1_1:+6669008 | Msa0004220:CDS |
GTGCTCCTAATTTCTCTGGA+GGG | 0.547044 | 1_1:-6669864 | None:intergenic |
GCCTTCTGGGCAATCATCAG+TGG | 0.549027 | 1_1:+6671097 | Msa0004220:CDS |
GACGATGATGATGCAGGTGA+TGG | 0.549546 | 1_1:-6671248 | None:intergenic |
AGCTAATTTCATCAGGAATG+TGG | 0.552057 | 1_1:+6669302 | Msa0004220:CDS |
GATTCAGGCACTATTGGTGC+AGG | 0.552270 | 1_1:-6669949 | None:intergenic |
GCTTTGTCTGGATGACACCT+CGG | 0.553283 | 1_1:-6670583 | None:intergenic |
ACCAACTCCCGCACTCGAGA+AGG | 0.553570 | 1_1:-6669016 | None:intergenic |
AGTTTGAAGGAACGCTTGGA+TGG | 0.554006 | 1_1:+6670886 | Msa0004220:CDS |
AACTCTTGTCAATAATGTTG+GGG | 0.554203 | 1_1:-6670218 | None:intergenic |
GGCCAGTTGTCTTCAGTGAA+CGG | 0.554883 | 1_1:+6669487 | Msa0004220:CDS |
AAACTGATTTACTGGACCAA+GGG | 0.555008 | 1_1:+6671324 | Msa0004220:CDS |
TGTCAATTCACTTTCACTTG+AGG | 0.555058 | 1_1:-6669725 | None:intergenic |
CCCGAGTTAAGATCAAAGTT+GGG | 0.555258 | 1_1:-6671800 | None:intergenic |
AGGTGGTACAGTTCCTTACA+TGG | 0.559099 | 1_1:+6671640 | Msa0004220:CDS |
AGATACTCAGATACCAGATA+AGG | 0.560646 | 1_1:+6669576 | Msa0004220:CDS |
TTCCTCAGGACATGCTTCAG+CGG | 0.561075 | 1_1:-6670610 | None:intergenic |
AAGTCAAAACAGTAGTAAGA+TGG | 0.561949 | 1_1:-6669684 | None:intergenic |
AAATCAATGTTTCGAACTGA+CGG | 0.562322 | 1_1:-6671281 | None:intergenic |
AAAGCTTCAGTGGAGGAAGA+AGG | 0.562681 | 1_1:+6670117 | Msa0004220:CDS |
TCTGGATGACACCTCGGGTA+GGG | 0.563962 | 1_1:-6670577 | None:intergenic |
CTTACAATGATGCCAGGAGC+TGG | 0.565275 | 1_1:+6671506 | Msa0004220:CDS |
TCTTCAGAGAAAAGCTCAGA+AGG | 0.565440 | 1_1:+6670495 | Msa0004220:CDS |
AAGAACCAGATGGTAGCGGT+TGG | 0.566058 | 1_1:+6671951 | Msa0004220:CDS |
GTTAAGATCAAAGTTGGGAC+GGG | 0.566742 | 1_1:-6671795 | None:intergenic |
CATTAAGATCAAAGGTGCAA+AGG | 0.568125 | 1_1:-6670746 | None:intergenic |
TCCGGTAGTACCTCAAGTTG+GGG | 0.568757 | 1_1:+6671679 | Msa0004220:CDS |
GCTAATTTCATCAGGAATGT+GGG | 0.570539 | 1_1:+6669303 | Msa0004220:CDS |
ACAACTATCTAAAGCTTCAG+TGG | 0.571210 | 1_1:+6670107 | Msa0004220:CDS |
AACAGCCAAGTTTCTAATCA+CGG | 0.572080 | 1_1:+6670141 | Msa0004220:CDS |
ATAGAGATGCATTGACTGCA+AGG | 0.572735 | 1_1:+6671843 | Msa0004220:CDS |
TCCTGGTCAGAACAGAGCTA+TGG | 0.573956 | 1_1:+6671877 | Msa0004220:CDS |
TTCACAATTCAAACTTGCAG+AGG | 0.574128 | 1_1:-6669641 | None:intergenic |
ATACTTGAAGAAGATTTGGT+AGG | 0.576252 | 1_1:-6671347 | None:intergenic |
ATATTCTTCATTAAGATCAA+AGG | 0.576467 | 1_1:-6670754 | None:intergenic |
CTGAAGCATGTCCTGAGGAA+AGG | 0.576650 | 1_1:+6670613 | Msa0004220:CDS |
TCTTGGTCATCACAGCTCCA+AGG | 0.578227 | 1_1:+6669342 | Msa0004220:CDS |
GTTGGTCTCTGTGATGAAGA+AGG | 0.579660 | 1_1:+6669033 | Msa0004220:CDS |
CAATCCTCAAGTTCAGGGGT+TGG | 0.580162 | 1_1:+6671917 | Msa0004220:CDS |
CAAGAGCACTATTTGACAAG+TGG | 0.581259 | 1_1:+6669377 | Msa0004220:CDS |
ACGAGGTGATGCAGGACGAA+AGG | 0.582185 | 1_1:-6670931 | None:intergenic |
GTAGATCTTACAATGATGCC+AGG | 0.582215 | 1_1:+6671500 | Msa0004220:CDS |
ATCATTGTAAGATCTACTGC+AGG | 0.583726 | 1_1:-6671494 | None:intergenic |
AGCCATGCTCATAATATATG+GGG | 0.584863 | 1_1:-6671738 | None:intergenic |
CCAACTCCCGCACTCGAGAA+GGG | 0.586656 | 1_1:-6669015 | None:intergenic |
TCCATAGCTCTGTTCTGACC+AGG | 0.588974 | 1_1:-6671878 | None:intergenic |
GATAAGAATCTCAAGGAGGA+AGG | 0.590458 | 1_1:+6669466 | Msa0004220:CDS |
CAACTCCCGCACTCGAGAAG+GGG | 0.590751 | 1_1:-6669014 | None:intergenic |
AGAAGAATGTTTCTGCTGGT+GGG | 0.590816 | 1_1:+6670970 | Msa0004220:CDS |
CAAACTGATTTACTGGACCA+AGG | 0.591390 | 1_1:+6671323 | Msa0004220:CDS |
AACTTACCTGTACCGAAACA+AGG | 0.592075 | 1_1:+6669763 | Msa0004220:CDS |
TGAACTTGAGGATTGTTGAA+GGG | 0.595658 | 1_1:-6671909 | None:intergenic |
TCAAACTGTAGAGGGGCTGT+TGG | 0.595682 | 1_1:-6670870 | None:intergenic |
AGATCAAAGTTGGGACGGGA+AGG | 0.596681 | 1_1:-6671791 | None:intergenic |
AGTTAAGATCAAAGTTGGGA+CGG | 0.597365 | 1_1:-6671796 | None:intergenic |
TCATATGTTGCAACTTGATG+GGG | 0.598970 | 1_1:+6669528 | Msa0004220:CDS |
CTGGCGATGCAATAAGACAA+TGG | 0.600185 | 1_1:+6669080 | Msa0004220:CDS |
CTTCAGATCAGAGGATGGAA+GGG | 0.600286 | 1_1:+6671192 | Msa0004220:CDS |
GCTGGCAGCGTGGAATCTGT+TGG | 0.600434 | 1_1:+6670531 | Msa0004220:CDS |
GACAGTATTGTGAAGAACAC+TGG | 0.602791 | 1_1:+6669061 | Msa0004220:CDS |
ACTGCGAAGACTCCAAGTCA+GGG | 0.608574 | 1_1:-6670680 | None:intergenic |
TTGTGGATTGCTAGAATCTG+TGG | 0.608879 | 1_1:-6670088 | None:intergenic |
ATTGACGACGATGATGATGC+AGG | 0.609742 | 1_1:-6671254 | None:intergenic |
CCTTACATGGTGGACTCAAG+AGG | 0.614111 | 1_1:+6671653 | Msa0004220:CDS |
TCGGGTTTCATGATTGATGG+CGG | 0.615028 | 1_1:+6671818 | Msa0004220:CDS |
TATGATTGATAAGAATCTCA+AGG | 0.619192 | 1_1:+6669459 | Msa0004220:CDS |
AATCAGAAGAATGTTTCTGC+TGG | 0.619736 | 1_1:+6670966 | Msa0004220:CDS |
ACGATGATGATGCAGGTGAT+GGG | 0.620906 | 1_1:-6671247 | None:intergenic |
TCAGAGAAAAGCTCAGAAGG+TGG | 0.622813 | 1_1:+6670498 | Msa0004220:CDS |
AGCGTTCCTTCAAACTGTAG+AGG | 0.623038 | 1_1:-6670879 | None:intergenic |
ACAATGATGCCAGGAGCTGG+TGG | 0.623886 | 1_1:+6671509 | Msa0004220:CDS |
GTCTGGATGACACCTCGGGT+AGG | 0.626282 | 1_1:-6670578 | None:intergenic |
TATTGACAAGAGTTCTGACA+TGG | 0.626964 | 1_1:+6670227 | Msa0004220:CDS |
AGAAAAGAACCAGATGGTAG+CGG | 0.632014 | 1_1:+6671947 | Msa0004220:CDS |
TGCAGGACGAAAGGCACTGG+TGG | 0.633312 | 1_1:-6670922 | None:intergenic |
CCAACCTTCAGATCAGAGGA+TGG | 0.635017 | 1_1:+6671187 | Msa0004220:CDS |
CTCTGATAAAATGAGTGTGG+TGG | 0.638162 | 1_1:+6670053 | Msa0004220:CDS |
GATAAAATGAGTGTGGTGGA+TGG | 0.638209 | 1_1:+6670057 | Msa0004220:CDS |
AAAGTGAATTGACATCGTCT+GGG | 0.640193 | 1_1:+6669734 | Msa0004220:CDS |
ACCAAGAAGGTTACTTACAG+TGG | 0.640251 | 1_1:-6669326 | None:intergenic |
ACTTCCTCAGCAACTTGTCG+AGG | 0.645833 | 1_1:-6670285 | None:intergenic |
CCTTGCATGTTCCCTACCCG+AGG | 0.646133 | 1_1:+6670566 | Msa0004220:CDS |
ACTCTGATATATCCAAACAA+AGG | 0.646226 | 1_1:+6670994 | Msa0004220:CDS |
AAATGACTTATCAATGAAGG+AGG | 0.646852 | 1_1:+6669819 | Msa0004220:CDS |
TGGTACAAATGATAGTGTCA+TGG | 0.647688 | 1_1:+6669222 | Msa0004220:CDS |
TTTGATCTGAATGTGGCTGG+GGG | 0.649877 | 1_1:+6671032 | Msa0004220:CDS |
TCAACAATCCTCAAGTTCAG+GGG | 0.649996 | 1_1:+6671913 | Msa0004220:CDS |
CTCCGCTGAAGCATGTCCTG+AGG | 0.650146 | 1_1:+6670608 | Msa0004220:CDS |
AATTGAACTTGACTATGGCA+TGG | 0.651982 | 1_1:+6670410 | Msa0004220:CDS |
TGGAGCTGTGATGACCAAGA+AGG | 0.654122 | 1_1:-6669339 | None:intergenic |
GGCAAAAGAAAAGAACCAGA+TGG | 0.656215 | 1_1:+6671941 | Msa0004220:CDS |
CCAGTTGTCTTCAGTGAACG+GGG | 0.656595 | 1_1:+6669489 | Msa0004220:CDS |
TTATTCAATTAGAAGGACCG+TGG | 0.658634 | 1_1:+6669158 | Msa0004220:CDS |
ATACCCAACCTTCAGATCAG+AGG | 0.660327 | 1_1:+6671183 | Msa0004220:CDS |
AACATCAGCAACAACCTCCG+TGG | 0.660346 | 1_1:+6671996 | Msa0004220:CDS |
AACGAGGCAAGCTGGCAGCG+TGG | 0.660760 | 1_1:+6670521 | Msa0004220:CDS |
ATATATTAGAGCTACTTCCA+CGG | 0.662581 | 1_1:-6672013 | None:intergenic |
ACTATCTAAAGCTTCAGTGG+AGG | 0.665990 | 1_1:+6670110 | Msa0004220:CDS |
CCAGCCGCGTATGGATCAGG+TGG | 0.671996 | 1_1:+6671623 | Msa0004220:CDS |
CGTTTCAGGGATGGGCCCTG+CGG | 0.673116 | 1_1:+6671532 | Msa0004220:CDS |
AATGATTGTAGGATACCGCA+GGG | 0.677137 | 1_1:-6671547 | None:intergenic |
CGTTCCTTCAAACTGTAGAG+GGG | 0.681833 | 1_1:-6670877 | None:intergenic |
TGTTCCTCGACAAGTTGCTG+AGG | 0.683361 | 1_1:+6670281 | Msa0004220:CDS |
CATATGTTGCAACTTGATGG+GGG | 0.686383 | 1_1:+6669529 | Msa0004220:CDS |
GCCATGCTCATAATATATGG+GGG | 0.686789 | 1_1:-6671737 | None:intergenic |
TGCCTCTGATAAAATGAGTG+TGG | 0.687179 | 1_1:+6670050 | Msa0004220:CDS |
CCTCGGGTAGGGAACATGCA+AGG | 0.689926 | 1_1:-6670566 | None:intergenic |
AGTCGCTAGACAAGTTGCTG+AGG | 0.692831 | 1_1:+6670446 | Msa0004220:CDS |
TGTACCACCTGATCCATACG+CGG | 0.695609 | 1_1:-6671627 | None:intergenic |
AAAGCTCAGAAGGTGGAACG+AGG | 0.698086 | 1_1:+6670505 | Msa0004220:CDS |
AACCATCTATCAATGAACCA+CGG | 0.715390 | 1_1:-6669175 | None:intergenic |
TGGTACAGTTCCTTACATGG+TGG | 0.722506 | 1_1:+6671643 | Msa0004220:CDS |
CCGGTAGTACCTCAAGTTGG+GGG | 0.731940 | 1_1:+6671680 | Msa0004220:CDS |
GATTGATAAGAATCTCAAGG+AGG | 0.757896 | 1_1:+6669462 | Msa0004220:CDS |
TATTAGAGCTACTTCCACGG+AGG | 0.760756 | 1_1:-6672010 | None:intergenic |
GAAGCAGCTCAAGATCCAGG+AGG | 0.773089 | 1_1:+6670708 | Msa0004220:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TTAAATGATGCTCAAAAATT+GGG | + | chr1_1:6669196-6669215 | Msa0004220:CDS | 20.0% |
!! | ATATTCTTCATTAAGATCAA+AGG | - | chr1_1:6670757-6670776 | None:intergenic | 20.0% |
!! | TTTGATCTTAATGAAGAATA+TGG | + | chr1_1:6670756-6670775 | Msa0004220:CDS | 20.0% |
!! | GAATTAGATTTGAATAGTAT+TGG | + | chr1_1:6671149-6671168 | Msa0004220:CDS | 20.0% |
!!! | TACAATCATTCAACTTTTTT+GGG | + | chr1_1:6671560-6671579 | Msa0004220:CDS | 20.0% |
! | CTAATTGAATAAAAAGGTCA+AGG | - | chr1_1:6669150-6669169 | None:intergenic | 25.0% |
!! | GACCTTTTTATTCAATTAGA+AGG | + | chr1_1:6669151-6669170 | Msa0004220:CDS | 25.0% |
! | GTCCTTCTAATTGAATAAAA+AGG | - | chr1_1:6669156-6669175 | None:intergenic | 25.0% |
! | GTTAAATGATGCTCAAAAAT+TGG | + | chr1_1:6669195-6669214 | Msa0004220:CDS | 25.0% |
! | TGAGATTCTTATCAATCATA+TGG | - | chr1_1:6669459-6669478 | None:intergenic | 25.0% |
! | TATGATTGATAAGAATCTCA+AGG | + | chr1_1:6669459-6669478 | Msa0004220:CDS | 25.0% |
! | TCATTTAACTGTAAATCATC+AGG | - | chr1_1:6669805-6669824 | None:intergenic | 25.0% |
! | GTTAAATGACTTATCAATGA+AGG | + | chr1_1:6669816-6669835 | Msa0004220:CDS | 25.0% |
! | AAGTTCAATTTCAGAATTCT+TGG | - | chr1_1:6670400-6670419 | None:intergenic | 25.0% |
!! | CAAATCTCTTTGATCTTTTA+GGG | - | chr1_1:6671130-6671149 | None:intergenic | 25.0% |
!! | TCAAATCTCTTTGATCTTTT+AGG | - | chr1_1:6671131-6671150 | None:intergenic | 25.0% |
! | AGTAAATCAGTTTGAAAGTA+CGG | - | chr1_1:6671317-6671336 | None:intergenic | 25.0% |
! | TTCAATACTTGAAGAAGATT+TGG | - | chr1_1:6671354-6671373 | None:intergenic | 25.0% |
!!! | TCTTCAAGTATTGAAGTATA+TGG | + | chr1_1:6671359-6671378 | Msa0004220:CDS | 25.0% |
! | CAAAAAAGTTGAATGATTGT+AGG | - | chr1_1:6671561-6671580 | None:intergenic | 25.0% |
!!! | CTACAATCATTCAACTTTTT+TGG | + | chr1_1:6671559-6671578 | Msa0004220:CDS | 25.0% |
!!! | TCAACTTTTTTGGGATATAA+TGG | + | chr1_1:6671569-6671588 | Msa0004220:CDS | 25.0% |
TTCATATGTTGCAACTTGAT+GGG | + | chr1_1:6669527-6669546 | Msa0004220:CDS | 30.0% | |
AAGTCAAAACAGTAGTAAGA+TGG | - | chr1_1:6669687-6669706 | None:intergenic | 30.0% | |
!! | TCTTTGAAACTTCCTTGTTT+CGG | - | chr1_1:6669778-6669797 | None:intergenic | 30.0% |
AAATGACTTATCAATGAAGG+AGG | + | chr1_1:6669819-6669838 | Msa0004220:CDS | 30.0% | |
TGTGATAAAGTAATAGTTCC+TGG | + | chr1_1:6670012-6670031 | Msa0004220:CDS | 30.0% | |
AACTCTTGTCAATAATGTTG+GGG | - | chr1_1:6670221-6670240 | None:intergenic | 30.0% | |
GAACTCTTGTCAATAATGTT+GGG | - | chr1_1:6670222-6670241 | None:intergenic | 30.0% | |
AGAACTCTTGTCAATAATGT+TGG | - | chr1_1:6670223-6670242 | None:intergenic | 30.0% | |
! | TCTGAAATTGAACTTGACTA+TGG | + | chr1_1:6670405-6670424 | Msa0004220:CDS | 30.0% |
! | TGATTATCAGCATTTTTACG+AGG | - | chr1_1:6670951-6670970 | None:intergenic | 30.0% |
ACTCTGATATATCCAAACAA+AGG | + | chr1_1:6670994-6671013 | Msa0004220:CDS | 30.0% | |
AAGAAAATCTTGCCTTTGTT+TGG | - | chr1_1:6671009-6671028 | None:intergenic | 30.0% | |
!! | TCTTGATTTTGATCTGAATG+TGG | + | chr1_1:6671025-6671044 | Msa0004220:CDS | 30.0% |
AAACAAATTGGTGAATCTTC+AGG | + | chr1_1:6671071-6671090 | Msa0004220:CDS | 30.0% | |
!! | TTGAATAGTATTGGTGATGA+TGG | + | chr1_1:6671158-6671177 | Msa0004220:CDS | 30.0% |
AAATCAATGTTTCGAACTGA+CGG | - | chr1_1:6671284-6671303 | None:intergenic | 30.0% | |
! | GTACTTTCAAACTGATTTAC+TGG | + | chr1_1:6671316-6671335 | Msa0004220:CDS | 30.0% |
! | ATACTTGAAGAAGATTTGGT+AGG | - | chr1_1:6671350-6671369 | None:intergenic | 30.0% |
ACTTTGACTGAGATGAAAGA+TGG | + | chr1_1:6668983-6669002 | Msa0004220:CDS | 35.0% | |
CTTTGACTGAGATGAAAGAT+GGG | + | chr1_1:6668984-6669003 | Msa0004220:CDS | 35.0% | |
TTATTCAATTAGAAGGACCG+TGG | + | chr1_1:6669158-6669177 | Msa0004220:CDS | 35.0% | |
AACCATCTATCAATGAACCA+CGG | - | chr1_1:6669178-6669197 | None:intergenic | 35.0% | |
AATGATGCTCAAAAATTGGG+TGG | + | chr1_1:6669199-6669218 | Msa0004220:CDS | 35.0% | |
! | TGGTACAAATGATAGTGTCA+TGG | + | chr1_1:6669222-6669241 | Msa0004220:CDS | 35.0% |
AGTGAGAAGCTAATTTCATC+AGG | + | chr1_1:6669295-6669314 | Msa0004220:CDS | 35.0% | |
AGCTAATTTCATCAGGAATG+TGG | + | chr1_1:6669302-6669321 | Msa0004220:CDS | 35.0% | |
GCTAATTTCATCAGGAATGT+GGG | + | chr1_1:6669303-6669322 | Msa0004220:CDS | 35.0% | |
TTTGACAAGTGGAAAGAAGT+TGG | + | chr1_1:6669388-6669407 | Msa0004220:CDS | 35.0% | |
AAGTGGAAAGAAGTTGGAAA+TGG | + | chr1_1:6669394-6669413 | Msa0004220:CDS | 35.0% | |
AGATGCTAAGTCTCATGATA+TGG | + | chr1_1:6669417-6669436 | Msa0004220:CDS | 35.0% | |
AAGTCTCATGATATGGATAC+TGG | + | chr1_1:6669424-6669443 | Msa0004220:CDS | 35.0% | |
GATTGATAAGAATCTCAAGG+AGG | + | chr1_1:6669462-6669481 | Msa0004220:CDS | 35.0% | |
GTTCATATGTTGCAACTTGA+TGG | + | chr1_1:6669526-6669545 | Msa0004220:CDS | 35.0% | |
TCATATGTTGCAACTTGATG+GGG | + | chr1_1:6669528-6669547 | Msa0004220:CDS | 35.0% | |
AGATACTCAGATACCAGATA+AGG | + | chr1_1:6669576-6669595 | Msa0004220:CDS | 35.0% | |
! | TTAACATTAGCAGCCTTATC+TGG | - | chr1_1:6669592-6669611 | None:intergenic | 35.0% |
TTCACAATTCAAACTTGCAG+AGG | - | chr1_1:6669644-6669663 | None:intergenic | 35.0% | |
TGTCAATTCACTTTCACTTG+AGG | - | chr1_1:6669728-6669747 | None:intergenic | 35.0% | |
AAAGTGAATTGACATCGTCT+GGG | + | chr1_1:6669734-6669753 | Msa0004220:CDS | 35.0% | |
GAGCAGGAACTAAATGATAA+AGG | + | chr1_1:6669841-6669860 | Msa0004220:CDS | 35.0% | |
GATTCAGGCTTAGGATTTAT+TGG | - | chr1_1:6669889-6669908 | None:intergenic | 35.0% | |
AAAGAAGATTCAGGCACTAT+TGG | - | chr1_1:6669958-6669977 | None:intergenic | 35.0% | |
AATAGTGCCTGAATCTTCTT+TGG | + | chr1_1:6669957-6669976 | Msa0004220:CDS | 35.0% | |
TCATGTTCCAAAGAAGATTC+AGG | - | chr1_1:6669967-6669986 | None:intergenic | 35.0% | |
!! | ACTGAAGCTTTAGATAGTTG+TGG | - | chr1_1:6670108-6670127 | None:intergenic | 35.0% |
! | ACAACTATCTAAAGCTTCAG+TGG | + | chr1_1:6670107-6670126 | Msa0004220:CDS | 35.0% |
AACAGCCAAGTTTCTAATCA+CGG | + | chr1_1:6670141-6670160 | Msa0004220:CDS | 35.0% | |
AAAAGAATCAGAGCCATTTG+AGG | - | chr1_1:6670175-6670194 | None:intergenic | 35.0% | |
! | TATTGACAAGAGTTCTGACA+TGG | + | chr1_1:6670227-6670246 | Msa0004220:CDS | 35.0% |
TCTGACATGGAACTTGATTA+TGG | + | chr1_1:6670240-6670259 | Msa0004220:CDS | 35.0% | |
GAAGGAATCAGAACTATTTG+AGG | - | chr1_1:6670340-6670359 | None:intergenic | 35.0% | |
AATTGAACTTGACTATGGCA+TGG | + | chr1_1:6670410-6670429 | Msa0004220:CDS | 35.0% | |
! | CATTAAGATCAAAGGTGCAA+AGG | - | chr1_1:6670749-6670768 | None:intergenic | 35.0% |
! | AATCAGAAGAATGTTTCTGC+TGG | + | chr1_1:6670966-6670985 | Msa0004220:CDS | 35.0% |
!! | ATTTTGATCTGAATGTGGCT+GGG | + | chr1_1:6671030-6671049 | Msa0004220:CDS | 35.0% |
GATGAACTGGCAAAACAAAT+TGG | + | chr1_1:6671059-6671078 | Msa0004220:CDS | 35.0% | |
! | TCTTTGGAAGAAATGGCTAT+TGG | + | chr1_1:6671222-6671241 | Msa0004220:CDS | 35.0% |
! | AAACTGATTTACTGGACCAA+GGG | + | chr1_1:6671324-6671343 | Msa0004220:CDS | 35.0% |
! | AAGAGCATGTTCCTCAAATT+TGG | + | chr1_1:6671444-6671463 | Msa0004220:CDS | 35.0% |
TTTGGCAAAGACCAAATTTG+AGG | - | chr1_1:6671458-6671477 | None:intergenic | 35.0% | |
! | CAAATTTGGTCTTTGCCAAA+TGG | + | chr1_1:6671458-6671477 | Msa0004220:CDS | 35.0% |
ATCATTGTAAGATCTACTGC+AGG | - | chr1_1:6671497-6671516 | None:intergenic | 35.0% | |
GTAAGATGATAGGACATTTG+AGG | - | chr1_1:6671711-6671730 | None:intergenic | 35.0% | |
AGCCATGCTCATAATATATG+GGG | - | chr1_1:6671741-6671760 | None:intergenic | 35.0% | |
CAGCCATGCTCATAATATAT+GGG | - | chr1_1:6671742-6671761 | None:intergenic | 35.0% | |
AGTTAAGATCAAAGTTGGGA+CGG | - | chr1_1:6671799-6671818 | None:intergenic | 35.0% | |
TCCCAACTTTGATCTTAACT+CGG | + | chr1_1:6671799-6671818 | Msa0004220:CDS | 35.0% | |
TTCTGACCAGGAAAGAAAAA+CGG | - | chr1_1:6671869-6671888 | None:intergenic | 35.0% | |
TGAACTTGAGGATTGTTGAA+GGG | - | chr1_1:6671912-6671931 | None:intergenic | 35.0% | |
TTCAACAATCCTCAAGTTCA+GGG | + | chr1_1:6671912-6671931 | Msa0004220:CDS | 35.0% | |
GACAGTATTGTGAAGAACAC+TGG | + | chr1_1:6669061-6669080 | Msa0004220:CDS | 40.0% | |
TGGCGATGCAATAAGACAAT+GGG | + | chr1_1:6669081-6669100 | Msa0004220:CDS | 40.0% | |
ACCAAGAAGGTTACTTACAG+TGG | - | chr1_1:6669329-6669348 | None:intergenic | 40.0% | |
TCTTGCTCTATCTTGAACCT+TGG | - | chr1_1:6669362-6669381 | None:intergenic | 40.0% | |
!! | CAAGAGCACTATTTGACAAG+TGG | + | chr1_1:6669377-6669396 | Msa0004220:CDS | 40.0% |
GATAAGAATCTCAAGGAGGA+AGG | + | chr1_1:6669466-6669485 | Msa0004220:CDS | 40.0% | |
CATATGTTGCAACTTGATGG+GGG | + | chr1_1:6669529-6669548 | Msa0004220:CDS | 40.0% | |
GAAAGTGAATTGACATCGTC+TGG | + | chr1_1:6669733-6669752 | Msa0004220:CDS | 40.0% | |
AACTTACCTGTACCGAAACA+AGG | + | chr1_1:6669763-6669782 | Msa0004220:CDS | 40.0% | |
! | AAACTTCCTTGTTTCGGTAC+AGG | - | chr1_1:6669772-6669791 | None:intergenic | 40.0% |
! | ATTGGTGCTCCTAATTTCTC+TGG | - | chr1_1:6669871-6669890 | None:intergenic | 40.0% |
ACAGAAACAGATTCAGGCTT+AGG | - | chr1_1:6669898-6669917 | None:intergenic | 40.0% | |
!! | AAGCCTGAATCTGTTTCTGT+TGG | + | chr1_1:6669898-6669917 | Msa0004220:CDS | 40.0% |
GATGTCAAAAGCAGTGAAGT+TGG | + | chr1_1:6669985-6670004 | Msa0004220:CDS | 40.0% | |
! | ACACTCATTTTATCAGAGGC+AGG | - | chr1_1:6670051-6670070 | None:intergenic | 40.0% |
TGCCTCTGATAAAATGAGTG+TGG | + | chr1_1:6670050-6670069 | Msa0004220:CDS | 40.0% | |
! | CACCACACTCATTTTATCAG+AGG | - | chr1_1:6670055-6670074 | None:intergenic | 40.0% |
CTCTGATAAAATGAGTGTGG+TGG | + | chr1_1:6670053-6670072 | Msa0004220:CDS | 40.0% | |
! | GATAAAATGAGTGTGGTGGA+TGG | + | chr1_1:6670057-6670076 | Msa0004220:CDS | 40.0% |
! | TTGTGGATTGCTAGAATCTG+TGG | - | chr1_1:6670091-6670110 | None:intergenic | 40.0% |
! | ACTATCTAAAGCTTCAGTGG+AGG | + | chr1_1:6670110-6670129 | Msa0004220:CDS | 40.0% |
TCAATAATGTTGGGGCTTGT+CGG | - | chr1_1:6670213-6670232 | None:intergenic | 40.0% | |
GGAAACTTTGCTCTGTTTGA+AGG | - | chr1_1:6670358-6670377 | None:intergenic | 40.0% | |
TCTTCAGAGAAAAGCTCAGA+AGG | + | chr1_1:6670495-6670514 | Msa0004220:CDS | 40.0% | |
ACATTCATATGCCTTTCCTC+AGG | - | chr1_1:6670627-6670646 | None:intergenic | 40.0% | |
! | CTTTTCTCTGAATTACCTCC+TGG | - | chr1_1:6670726-6670745 | None:intergenic | 40.0% |
!! | AGGTATCGGTGTTGTAGATA+TGG | - | chr1_1:6670811-6670830 | None:intergenic | 40.0% |
! | AGAAGAATGTTTCTGCTGGT+GGG | + | chr1_1:6670970-6670989 | Msa0004220:CDS | 40.0% |
!! | GATTTTGATCTGAATGTGGC+TGG | + | chr1_1:6671029-6671048 | Msa0004220:CDS | 40.0% |
! | TTTTGATCTGAATGTGGCTG+GGG | + | chr1_1:6671031-6671050 | Msa0004220:CDS | 40.0% |
! | CAGCTCTTCTTTGGAAGAAA+TGG | + | chr1_1:6671215-6671234 | Msa0004220:CDS | 40.0% |
! | CAAACTGATTTACTGGACCA+AGG | + | chr1_1:6671323-6671342 | Msa0004220:CDS | 40.0% |
!! | TATTGCAGGAGCATCTGATT+TGG | - | chr1_1:6671390-6671409 | None:intergenic | 40.0% |
!!! | TGCTCCTGCAATATCGATTT+TGG | + | chr1_1:6671397-6671416 | Msa0004220:CDS | 40.0% |
!!! | GCTCCTGCAATATCGATTTT+GGG | + | chr1_1:6671398-6671417 | Msa0004220:CDS | 40.0% |
!!! | CTCCTGCAATATCGATTTTG+GGG | + | chr1_1:6671399-6671418 | Msa0004220:CDS | 40.0% |
!!! | TCCTGCAATATCGATTTTGG+GGG | + | chr1_1:6671400-6671419 | Msa0004220:CDS | 40.0% |
GTAGATCTTACAATGATGCC+AGG | + | chr1_1:6671500-6671519 | Msa0004220:CDS | 40.0% | |
AATGATTGTAGGATACCGCA+GGG | - | chr1_1:6671550-6671569 | None:intergenic | 40.0% | |
GCCATGCTCATAATATATGG+GGG | - | chr1_1:6671740-6671759 | None:intergenic | 40.0% | |
CCAGCCATGCTCATAATATA+TGG | - | chr1_1:6671743-6671762 | None:intergenic | 40.0% | |
CCATATATTATGAGCATGGC+TGG | + | chr1_1:6671740-6671759 | Msa0004220:CDS | 40.0% | |
GGTACACAGCTTGGTTTAAA+CGG | + | chr1_1:6671761-6671780 | Msa0004220:CDS | 40.0% | |
GTTAAGATCAAAGTTGGGAC+GGG | - | chr1_1:6671798-6671817 | None:intergenic | 40.0% | |
CCCGAGTTAAGATCAAAGTT+GGG | - | chr1_1:6671803-6671822 | None:intergenic | 40.0% | |
CCCAACTTTGATCTTAACTC+GGG | + | chr1_1:6671800-6671819 | Msa0004220:CDS | 40.0% | |
ACCCGAGTTAAGATCAAAGT+TGG | - | chr1_1:6671804-6671823 | None:intergenic | 40.0% | |
AACTCGGGTTTCATGATTGA+TGG | + | chr1_1:6671815-6671834 | Msa0004220:CDS | 40.0% | |
!! | ATAGAGATGCATTGACTGCA+AGG | + | chr1_1:6671843-6671862 | Msa0004220:CDS | 40.0% |
AGAACAGAGCTATGGAAGAT+AGG | + | chr1_1:6671885-6671904 | Msa0004220:CDS | 40.0% | |
CTGAACTTGAGGATTGTTGA+AGG | - | chr1_1:6671913-6671932 | None:intergenic | 40.0% | |
CTTCAACAATCCTCAAGTTC+AGG | + | chr1_1:6671911-6671930 | Msa0004220:CDS | 40.0% | |
TCAACAATCCTCAAGTTCAG+GGG | + | chr1_1:6671913-6671932 | Msa0004220:CDS | 40.0% | |
GGCAAAAGAAAAGAACCAGA+TGG | + | chr1_1:6671941-6671960 | Msa0004220:CDS | 40.0% | |
AGAAAAGAACCAGATGGTAG+CGG | + | chr1_1:6671947-6671966 | Msa0004220:CDS | 40.0% | |
GGTTGGGAAACATATCCATT+TGG | + | chr1_1:6671968-6671987 | Msa0004220:CDS | 40.0% | |
TGCTGATGTTTGTAGCCAAA+TGG | - | chr1_1:6671986-6672005 | None:intergenic | 40.0% | |
! | GTTGGTCTCTGTGATGAAGA+AGG | + | chr1_1:6669033-6669052 | Msa0004220:CDS | 45.0% |
CTGGCGATGCAATAAGACAA+TGG | + | chr1_1:6669080-6669099 | Msa0004220:CDS | 45.0% | |
GACCGTGGTTCATTGATAGA+TGG | + | chr1_1:6669173-6669192 | Msa0004220:CDS | 45.0% | |
GATGCTCAAAAATTGGGTGG+TGG | + | chr1_1:6669202-6669221 | Msa0004220:CDS | 45.0% | |
GCCACTGTAAGTAACCTTCT+TGG | + | chr1_1:6669325-6669344 | Msa0004220:CDS | 45.0% | |
CTTATCAATGAAGGAGGAGC+AGG | + | chr1_1:6669825-6669844 | Msa0004220:CDS | 45.0% | |
AAAGGCCCTCCAGAGAAATT+AGG | + | chr1_1:6669859-6669878 | Msa0004220:CDS | 45.0% | |
GTGCTCCTAATTTCTCTGGA+GGG | - | chr1_1:6669867-6669886 | None:intergenic | 45.0% | |
GCACCAACAGAAACAGATTC+AGG | - | chr1_1:6669904-6669923 | None:intergenic | 45.0% | |
ATTGCTAGAATCTGTGGCTC+TGG | - | chr1_1:6670085-6670104 | None:intergenic | 45.0% | |
AAAGCTTCAGTGGAGGAAGA+AGG | + | chr1_1:6670117-6670136 | Msa0004220:CDS | 45.0% | |
TCAGAGAAAAGCTCAGAAGG+TGG | + | chr1_1:6670498-6670517 | Msa0004220:CDS | 45.0% | |
GAAGCAGAGACAACAGGTAT+CGG | - | chr1_1:6670825-6670844 | None:intergenic | 45.0% | |
!!! | GGTTTTGAAGCAGAGACAAC+AGG | - | chr1_1:6670831-6670850 | None:intergenic | 45.0% |
TCAAAACCTGCACAGACTTC+AGG | + | chr1_1:6670843-6670862 | Msa0004220:CDS | 45.0% | |
CGTTCCTTCAAACTGTAGAG+GGG | - | chr1_1:6670880-6670899 | None:intergenic | 45.0% | |
GCGTTCCTTCAAACTGTAGA+GGG | - | chr1_1:6670881-6670900 | None:intergenic | 45.0% | |
AGCGTTCCTTCAAACTGTAG+AGG | - | chr1_1:6670882-6670901 | None:intergenic | 45.0% | |
CTACAGTTTGAAGGAACGCT+TGG | + | chr1_1:6670882-6670901 | Msa0004220:CDS | 45.0% | |
AGTTTGAAGGAACGCTTGGA+TGG | + | chr1_1:6670886-6670905 | Msa0004220:CDS | 45.0% | |
AAGGAACGCTTGGATGGAAA+GGG | + | chr1_1:6670892-6670911 | Msa0004220:CDS | 45.0% | |
! | GCATTTTTACGAGGTGATGC+AGG | - | chr1_1:6670942-6670961 | None:intergenic | 45.0% |
! | CAGAAGAATGTTTCTGCTGG+TGG | + | chr1_1:6670969-6670988 | Msa0004220:CDS | 45.0% |
TTTGATCTGAATGTGGCTGG+GGG | + | chr1_1:6671032-6671051 | Msa0004220:CDS | 45.0% | |
AATCTTCAGGCTTGCCTTCT+GGG | + | chr1_1:6671084-6671103 | Msa0004220:CDS | 45.0% | |
ATACCCAACCTTCAGATCAG+AGG | + | chr1_1:6671183-6671202 | Msa0004220:CDS | 45.0% | |
CATCCTCTGATCTGAAGGTT+GGG | - | chr1_1:6671189-6671208 | None:intergenic | 45.0% | |
CTTCAGATCAGAGGATGGAA+GGG | + | chr1_1:6671192-6671211 | Msa0004220:CDS | 45.0% | |
! | ACGATGATGATGCAGGTGAT+GGG | - | chr1_1:6671250-6671269 | None:intergenic | 45.0% |
! | ATTGACGACGATGATGATGC+AGG | - | chr1_1:6671257-6671276 | None:intergenic | 45.0% |
! | AAGAAGATTTGGTAGGCCCT+TGG | - | chr1_1:6671343-6671362 | None:intergenic | 45.0% |
!!! | AATATCGATTTTGGGGGCCA+AGG | + | chr1_1:6671406-6671425 | Msa0004220:CDS | 45.0% |
!!! | TTTTCTACCGACTTCCACCT+TGG | - | chr1_1:6671426-6671445 | None:intergenic | 45.0% |
! | TTGGTCTTTGCCAAATGGCA+AGG | + | chr1_1:6671463-6671482 | Msa0004220:CDS | 45.0% |
GAATGATTGTAGGATACCGC+AGG | - | chr1_1:6671551-6671570 | None:intergenic | 45.0% | |
AGGTGGTACAGTTCCTTACA+TGG | + | chr1_1:6671640-6671659 | Msa0004220:CDS | 45.0% | |
TGGTACAGTTCCTTACATGG+TGG | + | chr1_1:6671643-6671662 | Msa0004220:CDS | 45.0% | |
GCCCCCATATATTATGAGCA+TGG | + | chr1_1:6671736-6671755 | Msa0004220:CDS | 45.0% | |
CAGCTTGGTTTAAACGGTGT+TGG | + | chr1_1:6671767-6671786 | Msa0004220:CDS | 45.0% | |
TCGGGTTTCATGATTGATGG+CGG | + | chr1_1:6671818-6671837 | Msa0004220:CDS | 45.0% | |
TGGAGCTGTGATGACCAAGA+AGG | - | chr1_1:6669342-6669361 | None:intergenic | 50.0% | |
TCTTGGTCATCACAGCTCCA+AGG | + | chr1_1:6669342-6669361 | Msa0004220:CDS | 50.0% | |
GGCCAGTTGTCTTCAGTGAA+CGG | + | chr1_1:6669487-6669506 | Msa0004220:CDS | 50.0% | |
GCCAGTTGTCTTCAGTGAAC+GGG | + | chr1_1:6669488-6669507 | Msa0004220:CDS | 50.0% | |
CCAGTTGTCTTCAGTGAACG+GGG | + | chr1_1:6669489-6669508 | Msa0004220:CDS | 50.0% | |
GGTGCTCCTAATTTCTCTGG+AGG | - | chr1_1:6669868-6669887 | None:intergenic | 50.0% | |
GATTCAGGCACTATTGGTGC+AGG | - | chr1_1:6669952-6669971 | None:intergenic | 50.0% | |
! | GCAGGTGTTTTCATGCTACC+AGG | - | chr1_1:6670033-6670052 | None:intergenic | 50.0% |
CGTCGCCGTGATTAGAAACT+TGG | - | chr1_1:6670149-6670168 | None:intergenic | 50.0% | |
TGTTCCTCGACAAGTTGCTG+AGG | + | chr1_1:6670281-6670300 | Msa0004220:CDS | 50.0% | |
ACTTCCTCAGCAACTTGTCG+AGG | - | chr1_1:6670288-6670307 | None:intergenic | 50.0% | |
GGTCACAATGTTAGCGCTTC+TGG | - | chr1_1:6670379-6670398 | None:intergenic | 50.0% | |
AGTCGCTAGACAAGTTGCTG+AGG | + | chr1_1:6670446-6670465 | Msa0004220:CDS | 50.0% | |
AAAGCTCAGAAGGTGGAACG+AGG | + | chr1_1:6670505-6670524 | Msa0004220:CDS | 50.0% | |
CTTTGTCTGGATGACACCTC+GGG | - | chr1_1:6670585-6670604 | None:intergenic | 50.0% | |
GCTTTGTCTGGATGACACCT+CGG | - | chr1_1:6670586-6670605 | None:intergenic | 50.0% | |
! | TTCAGCGGAGTTGCTTTGTC+TGG | - | chr1_1:6670598-6670617 | None:intergenic | 50.0% |
TTCCTCAGGACATGCTTCAG+CGG | - | chr1_1:6670613-6670632 | None:intergenic | 50.0% | |
CTGAAGCATGTCCTGAGGAA+AGG | + | chr1_1:6670613-6670632 | Msa0004220:CDS | 50.0% | |
TCCAAGTCAGGGATGCATTC+TGG | - | chr1_1:6670672-6670691 | None:intergenic | 50.0% | |
ACTGCGAAGACTCCAAGTCA+GGG | - | chr1_1:6670683-6670702 | None:intergenic | 50.0% | |
AACTGCGAAGACTCCAAGTC+AGG | - | chr1_1:6670684-6670703 | None:intergenic | 50.0% | |
ACTGAAGCAGCTCAAGATCC+AGG | + | chr1_1:6670705-6670724 | Msa0004220:CDS | 50.0% | |
TCAAACTGTAGAGGGGCTGT+TGG | - | chr1_1:6670873-6670892 | None:intergenic | 50.0% | |
ACAGCCCCTCTACAGTTTGA+AGG | + | chr1_1:6670873-6670892 | Msa0004220:CDS | 50.0% | |
GAAGGAACGCTTGGATGGAA+AGG | + | chr1_1:6670891-6670910 | Msa0004220:CDS | 50.0% | |
GAATCTTCAGGCTTGCCTTC+TGG | + | chr1_1:6671083-6671102 | Msa0004220:CDS | 50.0% | |
TCCACTGATGATTGCCCAGA+AGG | - | chr1_1:6671101-6671120 | None:intergenic | 50.0% | |
CCATCCTCTGATCTGAAGGT+TGG | - | chr1_1:6671190-6671209 | None:intergenic | 50.0% | |
CCAACCTTCAGATCAGAGGA+TGG | + | chr1_1:6671187-6671206 | Msa0004220:CDS | 50.0% | |
CCTTCCATCCTCTGATCTGA+AGG | - | chr1_1:6671194-6671213 | None:intergenic | 50.0% | |
CCTTCAGATCAGAGGATGGA+AGG | + | chr1_1:6671191-6671210 | Msa0004220:CDS | 50.0% | |
ATGGAAGGGCAGCTCTTCTT+TGG | + | chr1_1:6671206-6671225 | Msa0004220:CDS | 50.0% | |
! | GACGATGATGATGCAGGTGA+TGG | - | chr1_1:6671251-6671270 | None:intergenic | 50.0% |
GCCCCCAAAATCGATATTGC+AGG | - | chr1_1:6671404-6671423 | None:intergenic | 50.0% | |
CTTACAATGATGCCAGGAGC+TGG | + | chr1_1:6671506-6671525 | Msa0004220:CDS | 50.0% | |
GCTGGCGAAAAAGACAAAGG+GGG | - | chr1_1:6671608-6671627 | None:intergenic | 50.0% | |
GGCTGGCGAAAAAGACAAAG+GGG | - | chr1_1:6671609-6671628 | None:intergenic | 50.0% | |
CGGCTGGCGAAAAAGACAAA+GGG | - | chr1_1:6671610-6671629 | None:intergenic | 50.0% | |
TGTACCACCTGATCCATACG+CGG | - | chr1_1:6671630-6671649 | None:intergenic | 50.0% | |
CCTCTTGAGTCCACCATGTA+AGG | - | chr1_1:6671656-6671675 | None:intergenic | 50.0% | |
!! | CCTTACATGGTGGACTCAAG+AGG | + | chr1_1:6671653-6671672 | Msa0004220:CDS | 50.0% |
CTCCGGTAGTACCTCAAGTT+GGG | + | chr1_1:6671678-6671697 | Msa0004220:CDS | 50.0% | |
! | TCCGGTAGTACCTCAAGTTG+GGG | + | chr1_1:6671679-6671698 | Msa0004220:CDS | 50.0% |
AGATCAAAGTTGGGACGGGA+AGG | - | chr1_1:6671794-6671813 | None:intergenic | 50.0% | |
! | CGGGTTTCATGATTGATGGC+GGG | + | chr1_1:6671819-6671838 | Msa0004220:CDS | 50.0% |
!!! | GCAAGGCCGTTTTTCTTTCC+TGG | + | chr1_1:6671860-6671879 | Msa0004220:CDS | 50.0% |
TCCTGGTCAGAACAGAGCTA+TGG | + | chr1_1:6671877-6671896 | Msa0004220:CDS | 50.0% | |
! | TCCATAGCTCTGTTCTGACC+AGG | - | chr1_1:6671881-6671900 | None:intergenic | 50.0% |
CAATCCTCAAGTTCAGGGGT+TGG | + | chr1_1:6671917-6671936 | Msa0004220:CDS | 50.0% | |
!! | AAGAACCAGATGGTAGCGGT+TGG | + | chr1_1:6671951-6671970 | Msa0004220:CDS | 50.0% |
!! | AGAACCAGATGGTAGCGGTT+GGG | + | chr1_1:6671952-6671971 | Msa0004220:CDS | 50.0% |
AACATCAGCAACAACCTCCG+TGG | + | chr1_1:6671996-6672015 | Msa0004220:CDS | 50.0% | |
TCACAACCCCTTCTCGAGTG+CGG | + | chr1_1:6669008-6669027 | Msa0004220:CDS | 55.0% | |
CCCCGTTCACTGAAGACAAC+TGG | - | chr1_1:6669492-6669511 | None:intergenic | 55.0% | |
CACGGCGACGATACCTCAAA+TGG | + | chr1_1:6670159-6670178 | Msa0004220:CDS | 55.0% | |
TCTGGATGACACCTCGGGTA+GGG | - | chr1_1:6670580-6670599 | None:intergenic | 55.0% | |
GCCAGAATGCATCCCTGACT+TGG | + | chr1_1:6670668-6670687 | Msa0004220:CDS | 55.0% | |
GAAGCAGCTCAAGATCCAGG+AGG | + | chr1_1:6670708-6670727 | Msa0004220:CDS | 55.0% | |
GGCAATCCTGAAGTCTGTGC+AGG | - | chr1_1:6670852-6670871 | None:intergenic | 55.0% | |
! | TGATGCAGGACGAAAGGCAC+TGG | - | chr1_1:6670928-6670947 | None:intergenic | 55.0% |
ACGAGGTGATGCAGGACGAA+AGG | - | chr1_1:6670934-6670953 | None:intergenic | 55.0% | |
GCCTTCTGGGCAATCATCAG+TGG | + | chr1_1:6671097-6671116 | Msa0004220:CDS | 55.0% | |
!! | ATCGATTTTGGGGGCCAAGG+TGG | + | chr1_1:6671409-6671428 | Msa0004220:CDS | 55.0% |
GGCTCAACAGCCTTGCCATT+TGG | - | chr1_1:6671476-6671495 | None:intergenic | 55.0% | |
ACAATGATGCCAGGAGCTGG+TGG | + | chr1_1:6671509-6671528 | Msa0004220:CDS | 55.0% | |
GCGGCTGGCGAAAAAGACAA+AGG | - | chr1_1:6671611-6671630 | None:intergenic | 55.0% | |
!! | TCTTTTTCGCCAGCCGCGTA+TGG | + | chr1_1:6671614-6671633 | Msa0004220:CDS | 55.0% |
GCTCCGGTAGTACCTCAAGT+TGG | + | chr1_1:6671677-6671696 | Msa0004220:CDS | 55.0% | |
! | CCCCCAACTTGAGGTACTAC+CGG | - | chr1_1:6671683-6671702 | None:intergenic | 55.0% |
!! | CCGGTAGTACCTCAAGTTGG+GGG | + | chr1_1:6671680-6671699 | Msa0004220:CDS | 55.0% |
GAGGAAGATCCCCCAACTTG+AGG | - | chr1_1:6671692-6671711 | None:intergenic | 55.0% | |
GGGGCTGAGCGTAAGATGAT+AGG | - | chr1_1:6671721-6671740 | None:intergenic | 55.0% | |
AGCATGGCTGGTACACAGCT+TGG | + | chr1_1:6671752-6671771 | Msa0004220:CDS | 55.0% | |
TCCTCAAGTTCAGGGGTTGG+TGG | + | chr1_1:6671920-6671939 | Msa0004220:CDS | 55.0% | |
GTTTCCCAACCGCTACCATC+TGG | - | chr1_1:6671959-6671978 | None:intergenic | 55.0% | |
CACAACCCCTTCTCGAGTGC+GGG | + | chr1_1:6669009-6669028 | Msa0004220:CDS | 60.0% | |
CAACTCCCGCACTCGAGAAG+GGG | - | chr1_1:6669017-6669036 | None:intergenic | 60.0% | |
CCAACTCCCGCACTCGAGAA+GGG | - | chr1_1:6669018-6669037 | None:intergenic | 60.0% | |
ACCAACTCCCGCACTCGAGA+AGG | - | chr1_1:6669019-6669038 | None:intergenic | 60.0% | |
GGCACTATTGGTGCAGGCAC+AGG | - | chr1_1:6669946-6669965 | None:intergenic | 60.0% | |
GAAGGTGGAACGAGGCAAGC+TGG | + | chr1_1:6670513-6670532 | Msa0004220:CDS | 60.0% | |
GCTGGCAGCGTGGAATCTGT+TGG | + | chr1_1:6670531-6670550 | Msa0004220:CDS | 60.0% | |
CCTCGGGTAGGGAACATGCA+AGG | - | chr1_1:6670569-6670588 | None:intergenic | 60.0% | |
CCTTGCATGTTCCCTACCCG+AGG | + | chr1_1:6670566-6670585 | Msa0004220:CDS | 60.0% | |
GTCTGGATGACACCTCGGGT+AGG | - | chr1_1:6670581-6670600 | None:intergenic | 60.0% | |
CTCCGCTGAAGCATGTCCTG+AGG | + | chr1_1:6670608-6670627 | Msa0004220:CDS | 60.0% | |
!! | ACGAAAGGCACTGGTGGCAG+CGG | - | chr1_1:6670919-6670938 | None:intergenic | 60.0% |
!! | TGCAGGACGAAAGGCACTGG+TGG | - | chr1_1:6670925-6670944 | None:intergenic | 60.0% |
GGCTGGGGGTGAAGATGAAC+TGG | + | chr1_1:6671046-6671065 | Msa0004220:CDS | 60.0% | |
TTGGGGGCCAAGGTGGAAGT+CGG | + | chr1_1:6671416-6671435 | Msa0004220:CDS | 60.0% | |
! | CAGGAGCTGGTGGCGTTTCA+GGG | + | chr1_1:6671519-6671538 | Msa0004220:CDS | 60.0% |
! | AGCTGGTGGCGTTTCAGGGA+TGG | + | chr1_1:6671523-6671542 | Msa0004220:CDS | 60.0% |
! | GCTGGTGGCGTTTCAGGGAT+GGG | + | chr1_1:6671524-6671543 | Msa0004220:CDS | 60.0% |
! | GGTGGACTCAAGAGGAGCTC+CGG | + | chr1_1:6671661-6671680 | Msa0004220:CDS | 60.0% |
GCCACCAACCCCTGAACTTG+AGG | - | chr1_1:6671924-6671943 | None:intergenic | 60.0% | |
CCCTTCTCGAGTGCGGGAGT+TGG | + | chr1_1:6669015-6669034 | Msa0004220:CDS | 65.0% | |
AACGAGGCAAGCTGGCAGCG+TGG | + | chr1_1:6670521-6670540 | Msa0004220:CDS | 65.0% | |
CCTGAAACGCCACCAGCTCC+TGG | - | chr1_1:6671521-6671540 | None:intergenic | 65.0% | |
! | CCAGGAGCTGGTGGCGTTTC+AGG | + | chr1_1:6671518-6671537 | Msa0004220:CDS | 65.0% |
CGTTTCAGGGATGGGCCCTG+CGG | + | chr1_1:6671532-6671551 | Msa0004220:CDS | 65.0% | |
TCGCCAGCCGCGTATGGATC+AGG | + | chr1_1:6671620-6671639 | Msa0004220:CDS | 65.0% | |
CCACCTGATCCATACGCGGC+TGG | - | chr1_1:6671626-6671645 | None:intergenic | 65.0% | |
CCAGCCGCGTATGGATCAGG+TGG | + | chr1_1:6671623-6671642 | Msa0004220:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1_1 | gene | 6668962 | 6672024 | 6668962 | ID=Msa0004220;Name=Msa0004220 |
chr1_1 | mRNA | 6668962 | 6672024 | 6668962 | ID=Msa0004220-mRNA-1;Parent=Msa0004220;Name=Msa0004220-mRNA-1;_AED=0.11;_eAED=0.11;_QI=0|-1|0|1|-1|1|1|0|1020 |
chr1_1 | exon | 6668962 | 6672024 | 6668962 | ID=Msa0004220-mRNA-1:exon:2266;Parent=Msa0004220-mRNA-1 |
chr1_1 | CDS | 6668962 | 6672024 | 6668962 | ID=Msa0004220-mRNA-1:cds;Parent=Msa0004220-mRNA-1 |
Gene Sequence |
Protein sequence |