Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
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Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0006210 | sp|Q9S775|PKL_ARATH | 59.027 | 1069 | 340 | 15 | 11 | 989 | 270 | 1330 | 0.0 | 1196 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Gene ID | Type | Classification |
---|---|---|
Msa0006210 | TR | SNF2 |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0006210 | MtrunA17_Chr3g0137091 | 67.315 | 1080 | 250 | 13 | 5 | 988 | 280 | 1352 | 0.0 | 1387 |
Msa0006210 | MtrunA17_Chr1g0149861 | 75.135 | 555 | 48 | 5 | 443 | 912 | 1 | 550 | 0.0 | 800 |
Msa0006210 | MtrunA17_Chr4g0052341 | 41.203 | 665 | 269 | 9 | 12 | 566 | 743 | 1395 | 6.67e-142 | 469 |
Msa0006210 | MtrunA17_Chr3g0095091 | 36.082 | 873 | 400 | 26 | 8 | 788 | 565 | 1371 | 1.33e-140 | 461 |
Msa0006210 | MtrunA17_Chr5g0442141 | 36.374 | 866 | 399 | 27 | 12 | 788 | 615 | 1417 | 1.56e-140 | 461 |
Msa0006210 | MtrunA17_Chr4g0066741 | 43.555 | 512 | 249 | 8 | 3 | 509 | 177 | 653 | 1.74e-122 | 399 |
Msa0006210 | MtrunA17_Chr2g0286291 | 43.359 | 512 | 250 | 8 | 3 | 509 | 180 | 656 | 4.05e-114 | 377 |
Msa0006210 | MtrunA17_Chr5g0403921 | 43.497 | 469 | 209 | 8 | 12 | 452 | 182 | 622 | 5.95e-106 | 347 |
Msa0006210 | MtrunA17_Chr5g0394201 | 40.977 | 471 | 235 | 7 | 12 | 467 | 361 | 803 | 1.92e-101 | 342 |
Msa0006210 | MtrunA17_Chr1g0205891 | 41.139 | 474 | 231 | 8 | 12 | 467 | 374 | 817 | 6.20e-100 | 338 |
Msa0006210 | MtrunA17_Chr4g0066651 | 41.595 | 464 | 220 | 9 | 12 | 451 | 987 | 1423 | 1.12e-96 | 337 |
Msa0006210 | MtrunA17_Chr7g0232121 | 39.030 | 474 | 242 | 9 | 11 | 453 | 36 | 493 | 3.00e-95 | 321 |
Msa0006210 | MtrunA17_Chr8g0348721 | 36.777 | 484 | 244 | 8 | 1 | 451 | 974 | 1428 | 8.80e-83 | 295 |
Msa0006210 | MtrunA17_Chr7g0231521 | 36.105 | 457 | 200 | 9 | 11 | 453 | 36 | 414 | 1.10e-81 | 282 |
Msa0006210 | MtrunA17_Chr7g0248031 | 35.484 | 527 | 266 | 9 | 2 | 482 | 982 | 1480 | 1.85e-79 | 285 |
Msa0006210 | MtrunA17_Chr1g0163011 | 34.173 | 556 | 260 | 15 | 14 | 492 | 195 | 721 | 1.10e-74 | 261 |
Msa0006210 | MtrunA17_Chr1g0183681 | 34.702 | 487 | 273 | 12 | 14 | 467 | 391 | 865 | 6.54e-72 | 260 |
Msa0006210 | MtrunA17_Chr4g0017211 | 30.975 | 523 | 265 | 12 | 14 | 467 | 1450 | 1945 | 1.53e-57 | 217 |
Msa0006210 | MtrunA17_Chr7g0257101 | 38.110 | 328 | 163 | 8 | 12 | 318 | 576 | 884 | 4.26e-56 | 212 |
Msa0006210 | MtrunA17_Chr7g0257101 | 54.472 | 123 | 55 | 1 | 330 | 452 | 1186 | 1307 | 2.34e-32 | 136 |
Msa0006210 | MtrunA17_Chr8g0384531 | 30.754 | 517 | 252 | 16 | 14 | 463 | 384 | 861 | 8.68e-55 | 207 |
Msa0006210 | MtrunA17_Chr1g0175191 | 37.346 | 324 | 166 | 5 | 6 | 316 | 513 | 812 | 2.07e-54 | 207 |
Msa0006210 | MtrunA17_Chr1g0175191 | 54.701 | 117 | 52 | 1 | 336 | 452 | 1062 | 1177 | 1.29e-30 | 131 |
Msa0006210 | MtrunA17_Chr5g0393461 | 27.362 | 508 | 294 | 11 | 14 | 467 | 184 | 670 | 6.68e-48 | 185 |
Msa0006210 | MtrunA17_Chr1g0149871 | 89.535 | 86 | 9 | 0 | 8 | 93 | 238 | 323 | 5.96e-45 | 165 |
Msa0006210 | MtrunA17_Chr4g0069451 | 26.141 | 482 | 276 | 16 | 11 | 461 | 171 | 603 | 1.03e-30 | 129 |
Msa0006210 | MtrunA17_Chr7g0264371 | 27.273 | 451 | 268 | 14 | 14 | 445 | 280 | 689 | 1.66e-28 | 124 |
Msa0006210 | MtrunA17_Chr2g0296421 | 25.786 | 477 | 303 | 14 | 13 | 454 | 510 | 970 | 1.27e-27 | 120 |
Msa0006210 | MtrunA17_Chr8g0352361 | 24.792 | 480 | 305 | 15 | 13 | 454 | 360 | 821 | 2.06e-25 | 113 |
Msa0006210 | MtrunA17_Chr7g0233021 | 23.709 | 523 | 291 | 17 | 13 | 451 | 654 | 1152 | 6.56e-25 | 112 |
Msa0006210 | MtrunA17_Chr4g0040301 | 28.438 | 320 | 156 | 10 | 42 | 324 | 18 | 301 | 1.01e-24 | 110 |
Msa0006210 | MtrunA17_Chr4g0040301 | 41.481 | 135 | 78 | 1 | 333 | 467 | 377 | 510 | 1.08e-24 | 110 |
Msa0006210 | MtrunA17_Chr7g0232971 | 25.333 | 525 | 279 | 18 | 14 | 451 | 720 | 1218 | 5.11e-24 | 109 |
Msa0006210 | MtrunA17_Chr7g0233031 | 23.810 | 525 | 281 | 18 | 13 | 451 | 674 | 1165 | 4.43e-23 | 106 |
Msa0006210 | MtrunA17_Chr7g0225791 | 23.024 | 582 | 331 | 18 | 14 | 500 | 716 | 1275 | 9.30e-23 | 105 |
Msa0006210 | MtrunA17_Chr4g0047081 | 24.184 | 521 | 284 | 17 | 13 | 451 | 665 | 1156 | 1.11e-21 | 102 |
Msa0006210 | MtrunA17_Chr6g0457751 | 97.368 | 38 | 1 | 0 | 63 | 100 | 15 | 52 | 2.25e-20 | 85.9 |
Msa0006210 | MtrunA17_Chr1g0190381 | 36.111 | 180 | 94 | 5 | 332 | 498 | 184 | 355 | 7.25e-20 | 94.7 |
Msa0006210 | MtrunA17_Chr7g0233001 | 22.610 | 544 | 290 | 20 | 50 | 498 | 1 | 508 | 3.87e-19 | 92.4 |
Msa0006210 | MtrunA17_Chr1g0191141 | 24.949 | 489 | 307 | 14 | 35 | 467 | 556 | 1040 | 6.68e-19 | 92.8 |
Msa0006210 | MtrunA17_Chr2g0320751 | 25.455 | 275 | 154 | 8 | 64 | 314 | 479 | 726 | 8.73e-18 | 89.0 |
Msa0006210 | MtrunA17_Chr2g0320751 | 35.252 | 139 | 88 | 2 | 329 | 467 | 844 | 980 | 9.51e-17 | 85.9 |
Msa0006210 | MtrunA17_Chr1g0168031 | 24.620 | 329 | 171 | 10 | 36 | 314 | 536 | 837 | 1.71e-17 | 88.2 |
Msa0006210 | MtrunA17_Chr1g0168031 | 32.847 | 137 | 91 | 1 | 331 | 467 | 982 | 1117 | 7.76e-15 | 79.7 |
Msa0006210 | MtrunA17_Chr7g0255821 | 24.194 | 310 | 177 | 9 | 36 | 314 | 252 | 534 | 1.98e-16 | 84.3 |
Msa0006210 | MtrunA17_Chr7g0255821 | 35.172 | 145 | 88 | 4 | 325 | 466 | 637 | 778 | 1.22e-13 | 75.5 |
Msa0006210 | MtrunA17_Chr4g0039561 | 38.393 | 112 | 54 | 2 | 291 | 395 | 42 | 145 | 8.76e-16 | 77.0 |
Msa0006210 | MtrunA17_Chr7g0232991 | 23.833 | 407 | 248 | 12 | 160 | 517 | 272 | 665 | 1.84e-15 | 81.3 |
Msa0006210 | MtrunA17_Chr2g0281601 | 37.624 | 101 | 62 | 1 | 352 | 452 | 1148 | 1247 | 2.36e-13 | 74.7 |
Msa0006210 | MtrunA17_Chr2g0281601 | 21.914 | 324 | 188 | 9 | 65 | 338 | 665 | 973 | 2.60e-11 | 68.2 |
Msa0006210 | MtrunA17_Chr1g0212331 | 39.394 | 99 | 59 | 1 | 354 | 452 | 887 | 984 | 2.58e-13 | 74.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0006210 | AT2G25170.2 | 59.027 | 1069 | 340 | 15 | 11 | 989 | 287 | 1347 | 0.0 | 1196 |
Msa0006210 | AT2G25170.1 | 59.027 | 1069 | 340 | 15 | 11 | 989 | 270 | 1330 | 0.0 | 1196 |
Msa0006210 | AT2G25170.4 | 59.027 | 1069 | 340 | 15 | 11 | 989 | 270 | 1330 | 0.0 | 1196 |
Msa0006210 | AT2G25170.3 | 59.027 | 1069 | 340 | 15 | 11 | 989 | 296 | 1356 | 0.0 | 1195 |
Msa0006210 | AT4G31900.3 | 54.620 | 855 | 287 | 12 | 12 | 795 | 223 | 1047 | 0.0 | 907 |
Msa0006210 | AT4G31900.2 | 53.998 | 863 | 288 | 12 | 12 | 795 | 182 | 1014 | 0.0 | 904 |
Msa0006210 | AT4G31900.1 | 53.998 | 863 | 288 | 12 | 12 | 795 | 223 | 1055 | 0.0 | 904 |
Msa0006210 | AT2G13370.1 | 37.002 | 854 | 409 | 22 | 12 | 788 | 623 | 1424 | 1.15e-145 | 475 |
Msa0006210 | AT2G13370.2 | 37.002 | 854 | 409 | 22 | 12 | 788 | 623 | 1424 | 1.15e-145 | 475 |
Msa0006210 | AT2G13370.3 | 37.002 | 854 | 409 | 22 | 12 | 788 | 623 | 1424 | 1.15e-145 | 475 |
Msa0006210 | AT5G44800.1 | 41.917 | 699 | 264 | 16 | 12 | 592 | 687 | 1361 | 5.61e-139 | 461 |
Msa0006210 | AT5G18620.2 | 43.750 | 512 | 248 | 8 | 3 | 509 | 183 | 659 | 6.60e-116 | 382 |
Msa0006210 | AT5G18620.1 | 43.750 | 512 | 248 | 8 | 3 | 509 | 183 | 659 | 1.01e-115 | 382 |
Msa0006210 | AT3G06400.3 | 43.359 | 512 | 250 | 8 | 3 | 509 | 178 | 654 | 1.80e-113 | 375 |
Msa0006210 | AT3G06400.2 | 43.359 | 512 | 250 | 8 | 3 | 509 | 178 | 654 | 1.98e-113 | 375 |
Msa0006210 | AT3G06400.1 | 43.359 | 512 | 250 | 8 | 3 | 509 | 178 | 654 | 2.43e-113 | 375 |
Msa0006210 | AT5G19310.2 | 42.251 | 471 | 229 | 6 | 12 | 467 | 120 | 562 | 5.96e-108 | 354 |
Msa0006210 | AT5G19310.1 | 42.251 | 471 | 229 | 6 | 12 | 467 | 384 | 826 | 2.44e-105 | 353 |
Msa0006210 | AT3G06010.1 | 41.401 | 471 | 234 | 6 | 12 | 467 | 401 | 844 | 2.57e-101 | 343 |
Msa0006210 | AT5G66750.1 | 42.366 | 465 | 220 | 10 | 12 | 452 | 200 | 640 | 1.07e-94 | 317 |
Msa0006210 | AT2G28290.5 | 40.725 | 469 | 217 | 8 | 12 | 451 | 753 | 1189 | 1.89e-94 | 330 |
Msa0006210 | AT2G28290.3 | 40.725 | 469 | 217 | 8 | 12 | 451 | 752 | 1188 | 1.96e-94 | 330 |
Msa0006210 | AT2G28290.4 | 40.725 | 469 | 217 | 8 | 12 | 451 | 752 | 1188 | 1.96e-94 | 330 |
Msa0006210 | AT2G28290.6 | 40.725 | 469 | 217 | 8 | 12 | 451 | 753 | 1189 | 1.99e-94 | 330 |
Msa0006210 | AT2G28290.1 | 40.725 | 469 | 217 | 8 | 12 | 451 | 752 | 1188 | 2.06e-94 | 330 |
Msa0006210 | AT2G28290.2 | 40.725 | 469 | 217 | 8 | 12 | 451 | 752 | 1188 | 2.12e-94 | 330 |
Msa0006210 | AT2G44980.3 | 38.936 | 470 | 240 | 9 | 14 | 453 | 51 | 503 | 3.58e-93 | 316 |
Msa0006210 | AT2G44980.1 | 38.578 | 464 | 236 | 9 | 12 | 453 | 49 | 485 | 2.12e-92 | 313 |
Msa0006210 | AT2G44980.2 | 38.641 | 471 | 241 | 10 | 14 | 453 | 51 | 504 | 7.41e-91 | 310 |
Msa0006210 | AT2G46020.2 | 35.217 | 531 | 264 | 9 | 1 | 482 | 968 | 1467 | 3.73e-81 | 290 |
Msa0006210 | AT2G46020.3 | 35.217 | 531 | 264 | 9 | 1 | 482 | 968 | 1467 | 3.73e-81 | 290 |
Msa0006210 | AT2G46020.4 | 35.217 | 531 | 264 | 9 | 1 | 482 | 968 | 1467 | 3.73e-81 | 290 |
Msa0006210 | AT2G46020.5 | 35.593 | 531 | 261 | 10 | 1 | 482 | 968 | 1466 | 1.39e-80 | 288 |
Msa0006210 | AT2G46020.1 | 35.593 | 531 | 261 | 10 | 1 | 482 | 968 | 1466 | 1.39e-80 | 288 |
Msa0006210 | AT2G46020.6 | 35.593 | 531 | 261 | 10 | 1 | 482 | 968 | 1466 | 1.39e-80 | 288 |
Msa0006210 | AT2G02090.1 | 33.750 | 560 | 273 | 15 | 14 | 500 | 213 | 747 | 2.36e-72 | 255 |
Msa0006210 | AT2G18760.4 | 35.197 | 483 | 276 | 11 | 13 | 467 | 384 | 857 | 5.27e-71 | 257 |
Msa0006210 | AT2G18760.1 | 35.197 | 483 | 276 | 11 | 13 | 467 | 384 | 857 | 5.27e-71 | 257 |
Msa0006210 | AT2G18760.2 | 35.197 | 483 | 276 | 11 | 13 | 467 | 384 | 857 | 5.27e-71 | 257 |
Msa0006210 | AT2G18760.7 | 35.197 | 483 | 276 | 11 | 13 | 467 | 384 | 857 | 5.27e-71 | 257 |
Msa0006210 | AT2G18760.5 | 35.197 | 483 | 276 | 11 | 13 | 467 | 384 | 857 | 5.27e-71 | 257 |
Msa0006210 | AT2G18760.6 | 35.197 | 483 | 276 | 11 | 13 | 467 | 384 | 857 | 5.27e-71 | 257 |
Msa0006210 | AT2G18760.3 | 35.197 | 483 | 276 | 11 | 13 | 467 | 443 | 916 | 8.94e-71 | 257 |
Msa0006210 | AT3G54280.1 | 31.509 | 530 | 256 | 16 | 13 | 467 | 1450 | 1947 | 9.11e-58 | 218 |
Msa0006210 | AT5G63950.1 | 30.492 | 528 | 262 | 16 | 4 | 463 | 363 | 853 | 1.30e-57 | 216 |
Msa0006210 | AT3G54280.2 | 31.509 | 530 | 256 | 16 | 13 | 467 | 1481 | 1978 | 1.36e-57 | 218 |
Msa0006210 | AT3G12810.1 | 38.608 | 316 | 157 | 5 | 14 | 316 | 536 | 827 | 7.51e-55 | 209 |
Msa0006210 | AT3G12810.1 | 54.701 | 117 | 52 | 1 | 336 | 452 | 1075 | 1190 | 1.01e-29 | 129 |
Msa0006210 | AT3G12810.2 | 38.608 | 316 | 157 | 5 | 14 | 316 | 532 | 823 | 8.27e-55 | 209 |
Msa0006210 | AT3G12810.2 | 54.701 | 117 | 52 | 1 | 336 | 452 | 1071 | 1186 | 1.05e-29 | 128 |
Msa0006210 | AT5G63950.2 | 30.426 | 516 | 261 | 17 | 4 | 463 | 363 | 836 | 1.96e-54 | 206 |
Msa0006210 | AT3G57300.1 | 37.423 | 326 | 164 | 8 | 11 | 315 | 583 | 889 | 1.20e-53 | 205 |
Msa0006210 | AT3G57300.1 | 54.472 | 123 | 55 | 1 | 330 | 452 | 1200 | 1321 | 9.29e-32 | 135 |
Msa0006210 | AT3G57300.4 | 37.423 | 326 | 164 | 8 | 11 | 315 | 583 | 889 | 1.20e-53 | 205 |
Msa0006210 | AT3G57300.4 | 54.472 | 123 | 55 | 1 | 330 | 452 | 1200 | 1321 | 9.29e-32 | 135 |
Msa0006210 | AT3G57300.3 | 37.423 | 326 | 164 | 8 | 11 | 315 | 583 | 889 | 1.33e-53 | 204 |
Msa0006210 | AT3G57300.2 | 35.447 | 347 | 175 | 10 | 11 | 315 | 583 | 922 | 2.84e-51 | 197 |
Msa0006210 | AT3G57300.2 | 54.472 | 123 | 55 | 1 | 330 | 452 | 1233 | 1354 | 1.10e-31 | 135 |
Msa0006210 | AT3G19210.3 | 26.719 | 509 | 296 | 12 | 14 | 467 | 180 | 666 | 2.13e-48 | 186 |
Msa0006210 | AT3G19210.1 | 26.719 | 509 | 296 | 12 | 14 | 467 | 180 | 666 | 3.04e-48 | 186 |
Msa0006210 | AT3G19210.2 | 26.575 | 508 | 296 | 12 | 14 | 467 | 180 | 664 | 1.09e-47 | 184 |
Msa0006210 | AT1G48310.3 | 27.975 | 479 | 271 | 17 | 11 | 461 | 169 | 601 | 3.66e-35 | 143 |
Msa0006210 | AT1G48310.1 | 27.975 | 479 | 271 | 17 | 11 | 461 | 169 | 601 | 5.31e-35 | 143 |
Msa0006210 | AT1G48310.2 | 27.975 | 479 | 271 | 17 | 11 | 461 | 174 | 606 | 5.41e-35 | 143 |
Msa0006210 | AT1G03750.1 | 31.650 | 297 | 147 | 6 | 13 | 280 | 138 | 407 | 1.65e-31 | 133 |
Msa0006210 | AT1G03750.1 | 40.441 | 136 | 80 | 1 | 332 | 467 | 524 | 658 | 5.76e-24 | 109 |
Msa0006210 | AT3G24340.1 | 25.780 | 481 | 304 | 17 | 14 | 451 | 577 | 1047 | 6.84e-27 | 119 |
Msa0006210 | AT5G07810.1 | 24.847 | 491 | 278 | 15 | 14 | 453 | 204 | 654 | 8.11e-27 | 119 |
Msa0006210 | AT1G02670.7 | 23.636 | 495 | 271 | 15 | 36 | 451 | 146 | 612 | 1.84e-23 | 107 |
Msa0006210 | AT2G21450.3 | 24.803 | 508 | 287 | 16 | 13 | 454 | 173 | 651 | 3.19e-23 | 106 |
Msa0006210 | AT2G21450.1 | 24.803 | 508 | 287 | 16 | 13 | 454 | 264 | 742 | 3.54e-23 | 106 |
Msa0006210 | AT2G21450.2 | 24.803 | 508 | 287 | 16 | 13 | 454 | 271 | 749 | 3.55e-23 | 106 |
Msa0006210 | AT2G16390.2 | 25.455 | 495 | 285 | 16 | 12 | 451 | 351 | 816 | 4.46e-23 | 106 |
Msa0006210 | AT2G16390.1 | 25.455 | 495 | 285 | 16 | 12 | 451 | 348 | 813 | 4.89e-23 | 106 |
Msa0006210 | AT1G08600.1 | 27.508 | 309 | 145 | 10 | 12 | 280 | 717 | 986 | 1.76e-21 | 101 |
Msa0006210 | AT1G08600.1 | 45.385 | 130 | 58 | 4 | 335 | 451 | 1093 | 1222 | 2.34e-20 | 98.2 |
Msa0006210 | AT5G22750.1 | 24.217 | 351 | 167 | 10 | 36 | 314 | 416 | 739 | 1.13e-20 | 99.0 |
Msa0006210 | AT5G22750.1 | 33.333 | 144 | 94 | 2 | 324 | 467 | 852 | 993 | 4.75e-17 | 87.0 |
Msa0006210 | AT1G08600.4 | 45.385 | 130 | 58 | 4 | 335 | 451 | 1114 | 1243 | 2.32e-20 | 98.2 |
Msa0006210 | AT1G08600.4 | 27.213 | 305 | 172 | 8 | 12 | 280 | 717 | 1007 | 2.40e-19 | 94.7 |
Msa0006210 | AT1G08600.3 | 45.385 | 130 | 58 | 4 | 335 | 451 | 1114 | 1243 | 2.32e-20 | 98.2 |
Msa0006210 | AT1G08600.3 | 27.213 | 305 | 172 | 8 | 12 | 280 | 717 | 1007 | 2.40e-19 | 94.7 |
Msa0006210 | AT1G08600.2 | 45.385 | 130 | 58 | 4 | 335 | 451 | 1114 | 1243 | 2.32e-20 | 98.2 |
Msa0006210 | AT1G08600.2 | 27.213 | 305 | 172 | 8 | 12 | 280 | 717 | 1007 | 2.40e-19 | 94.7 |
Msa0006210 | AT1G48310.4 | 25.974 | 385 | 221 | 15 | 11 | 376 | 169 | 508 | 3.50e-19 | 92.8 |
Msa0006210 | AT1G02670.4 | 28.934 | 197 | 97 | 5 | 36 | 215 | 146 | 316 | 1.80e-15 | 81.3 |
Msa0006210 | AT1G02670.5 | 28.934 | 197 | 97 | 5 | 36 | 215 | 119 | 289 | 2.40e-15 | 80.9 |
Msa0006210 | AT1G02670.6 | 28.934 | 197 | 97 | 5 | 36 | 215 | 119 | 289 | 2.58e-15 | 81.3 |
Msa0006210 | AT1G02670.3 | 28.934 | 197 | 97 | 5 | 36 | 215 | 146 | 316 | 2.91e-15 | 80.9 |
Msa0006210 | AT1G02670.2 | 28.934 | 197 | 97 | 5 | 36 | 215 | 146 | 316 | 2.92e-15 | 80.9 |
Msa0006210 | AT5G43530.1 | 23.353 | 334 | 172 | 12 | 36 | 314 | 684 | 988 | 5.09e-15 | 80.9 |
Msa0006210 | AT5G43530.1 | 35.294 | 119 | 74 | 2 | 335 | 451 | 1108 | 1225 | 8.48e-15 | 80.1 |
Msa0006210 | AT1G61140.3 | 33.333 | 126 | 80 | 2 | 346 | 471 | 959 | 1080 | 1.10e-14 | 79.3 |
Msa0006210 | AT1G61140.1 | 33.333 | 126 | 80 | 2 | 346 | 471 | 1117 | 1238 | 1.46e-14 | 79.3 |
Msa0006210 | AT1G02670.1 | 28.947 | 190 | 92 | 5 | 36 | 208 | 157 | 320 | 2.23e-14 | 78.2 |
Msa0006210 | AT3G16600.1 | 24.324 | 333 | 190 | 11 | 17 | 316 | 56 | 359 | 3.20e-14 | 77.4 |
Msa0006210 | AT1G11100.1 | 21.802 | 344 | 173 | 9 | 36 | 311 | 567 | 882 | 4.38e-14 | 77.8 |
Msa0006210 | AT1G11100.1 | 34.711 | 121 | 73 | 3 | 352 | 471 | 1071 | 1186 | 7.60e-13 | 73.6 |
Msa0006210 | AT1G11100.5 | 21.802 | 344 | 173 | 9 | 36 | 311 | 424 | 739 | 6.72e-14 | 77.0 |
Msa0006210 | AT1G11100.5 | 34.711 | 121 | 73 | 3 | 352 | 471 | 928 | 1043 | 5.22e-13 | 73.9 |
Msa0006210 | AT5G05130.1 | 26.887 | 212 | 115 | 7 | 131 | 313 | 401 | 601 | 1.39e-13 | 75.9 |
Msa0006210 | AT5G05130.1 | 35.385 | 130 | 82 | 2 | 340 | 467 | 712 | 841 | 1.03e-12 | 72.8 |
Msa0006210 | AT3G20010.3 | 37.374 | 99 | 61 | 1 | 354 | 452 | 628 | 725 | 2.60e-13 | 74.7 |
Msa0006210 | AT3G20010.2 | 37.374 | 99 | 61 | 1 | 354 | 452 | 603 | 700 | 2.71e-13 | 74.7 |
Msa0006210 | AT3G20010.2 | 23.194 | 263 | 161 | 6 | 58 | 279 | 119 | 381 | 7.77e-11 | 66.6 |
Msa0006210 | AT3G20010.1 | 37.374 | 99 | 61 | 1 | 354 | 452 | 894 | 991 | 5.61e-13 | 73.9 |
Msa0006210 | AT3G20010.1 | 23.194 | 263 | 161 | 6 | 58 | 279 | 410 | 672 | 7.26e-11 | 67.0 |
Msa0006210 | AT3G20010.5 | 37.374 | 99 | 61 | 1 | 354 | 452 | 894 | 991 | 5.61e-13 | 73.9 |
Msa0006210 | AT3G20010.5 | 23.194 | 263 | 161 | 6 | 58 | 279 | 410 | 672 | 7.26e-11 | 67.0 |
Msa0006210 | AT3G20010.7 | 37.374 | 99 | 61 | 1 | 354 | 452 | 894 | 991 | 5.61e-13 | 73.9 |
Msa0006210 | AT3G20010.7 | 23.194 | 263 | 161 | 6 | 58 | 279 | 410 | 672 | 7.26e-11 | 67.0 |
Msa0006210 | AT1G11100.3 | 34.711 | 121 | 73 | 3 | 352 | 471 | 972 | 1087 | 5.92e-13 | 73.9 |
Msa0006210 | AT1G50410.2 | 37.374 | 99 | 61 | 1 | 354 | 452 | 828 | 925 | 6.19e-13 | 73.6 |
Msa0006210 | AT1G50410.2 | 21.639 | 305 | 192 | 9 | 58 | 315 | 339 | 643 | 2.15e-12 | 72.0 |
Msa0006210 | AT1G50410.1 | 37.374 | 99 | 61 | 1 | 354 | 452 | 828 | 925 | 6.19e-13 | 73.6 |
Msa0006210 | AT1G50410.1 | 21.639 | 305 | 192 | 9 | 58 | 315 | 339 | 643 | 2.15e-12 | 72.0 |
Msa0006210 | AT1G50410.3 | 37.374 | 99 | 61 | 1 | 354 | 452 | 828 | 925 | 6.19e-13 | 73.6 |
Msa0006210 | AT1G50410.3 | 21.639 | 305 | 192 | 9 | 58 | 315 | 339 | 643 | 2.15e-12 | 72.0 |
Msa0006210 | AT1G11100.2 | 34.711 | 121 | 73 | 3 | 352 | 471 | 1114 | 1229 | 7.69e-13 | 73.6 |
Msa0006210 | AT1G11100.4 | 34.711 | 121 | 73 | 3 | 352 | 471 | 1115 | 1230 | 8.16e-13 | 73.6 |
Msa0006210 | AT1G50410.4 | 21.639 | 305 | 192 | 9 | 58 | 315 | 339 | 643 | 2.60e-12 | 71.6 |
Msa0006210 | AT3G20010.4 | 23.194 | 263 | 161 | 6 | 58 | 279 | 410 | 672 | 7.33e-11 | 67.0 |
Msa0006210 | AT3G20010.6 | 23.194 | 263 | 161 | 6 | 58 | 279 | 410 | 672 | 7.33e-11 | 67.0 |
Msa0006210 | AT3G20010.8 | 23.194 | 263 | 161 | 6 | 58 | 279 | 410 | 672 | 7.33e-11 | 67.0 |
Find 194 sgRNAs with CRISPR-Local
Find 547 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TACCATGCACTCCCACTTTA+TGG | 0.101907 | 1_1:-9083369 | None:intergenic |
TGGATTTCTGAAAGCCTTTA+AGG | 0.136843 | 1_1:+9087494 | Msa0006210:CDS |
CACTTTCTACACTGCGAAAC+TGG | 0.184157 | 1_1:+9083040 | Msa0006210:CDS |
CACAAATCCACCGCCGTTAA+TGG | 0.211464 | 1_1:+9088867 | Msa0006210:CDS |
TGATATCCTTAAACTCTTCT+TGG | 0.215907 | 1_1:-9084465 | None:intergenic |
CTTCAGAAGGAAAACACTTT+TGG | 0.217933 | 1_1:+9088349 | Msa0006210:CDS |
CACTTACAGAGTATTCTTTC+TGG | 0.232566 | 1_1:-9090903 | None:intergenic |
CATATGAGAGTCAACCTTAA+AGG | 0.255775 | 1_1:-9087508 | None:intergenic |
TTTCTTCTTGGAAGGTCTTC+TGG | 0.261012 | 1_1:-9088740 | None:intergenic |
TTTCTATTAAGGCATGGATA+TGG | 0.272791 | 1_1:+9090532 | Msa0006210:intron |
TCTACTAGAGCTGGTGGATT+GGG | 0.274315 | 1_1:+9086352 | Msa0006210:CDS |
TGTATTACAAGCTTTCTTCT+TGG | 0.280113 | 1_1:-9088752 | None:intergenic |
AGAGTTCCAAGAAGAGTTTA+AGG | 0.282522 | 1_1:+9084459 | Msa0006210:CDS |
CGGCATCGTCGTAATGAATT+TGG | 0.282881 | 1_1:-9087318 | None:intergenic |
GGTAGTGCTGCAGCAGTTAA+TGG | 0.286681 | 1_1:+9090730 | Msa0006210:CDS |
GGAATATTGCTAAAAGTTCT+TGG | 0.294314 | 1_1:+9088898 | Msa0006210:CDS |
ACCATGCACTCCCACTTTAT+GGG | 0.301385 | 1_1:-9083368 | None:intergenic |
TTCTCTTAACAATGTTGTTA+TGG | 0.306227 | 1_1:+9085190 | Msa0006210:CDS |
AAGAAAGAGGTTTCCTCTCT+TGG | 0.308670 | 1_1:+9090855 | Msa0006210:CDS |
ACAGTTGATGCAACGCTTCT+TGG | 0.313557 | 1_1:-9090780 | None:intergenic |
GACTGAACTACCTCCTAAAA+AGG | 0.317520 | 1_1:+9084939 | Msa0006210:CDS |
TTTGACAGGAACTCCTCTTC+AGG | 0.319293 | 1_1:+9083624 | Msa0006210:CDS |
TTCAAAGGGGATTCCACATT+TGG | 0.332541 | 1_1:-9090688 | None:intergenic |
TGAAGTACTTGTTAGAATAT+CGG | 0.338661 | 1_1:+9089478 | Msa0006210:CDS |
GCAACTTCCCTGATGATTCC+AGG | 0.339160 | 1_1:-9086013 | None:intergenic |
TTCAATCCCTCAAGTTGATA+TGG | 0.340274 | 1_1:-9082766 | None:intergenic |
TGTTATACTTGCTGATGAAA+TGG | 0.341387 | 1_1:+9082822 | Msa0006210:CDS |
TCTGTTTCTTTATGCAGAAC+TGG | 0.341831 | 1_1:-9085260 | None:intergenic |
CCTTAAATTGAGAAAATATA+AGG | 0.353648 | 1_1:-9086085 | None:intergenic |
TAAGAAAGCAATACTTTGTA+TGG | 0.354240 | 1_1:-9082971 | None:intergenic |
GCGAAACCGCACAACTTTAC+TGG | 0.363860 | 1_1:+9088440 | Msa0006210:CDS |
TGCAAAATGCCTTGGGTAAA+GGG | 0.375447 | 1_1:+9088415 | Msa0006210:CDS |
TTGTTCTTCTTCGGATTCTT+CGG | 0.375937 | 1_1:-9083236 | None:intergenic |
GAGGCAGTTGATAACTCGTT+TGG | 0.380381 | 1_1:-9091287 | None:intergenic |
ATCAGGGAAGTTGCAATTGT+TGG | 0.385913 | 1_1:+9086022 | Msa0006210:CDS |
ATTCCTTCACCTTCCATTAA+CGG | 0.387084 | 1_1:-9088880 | None:intergenic |
GACAAGCATTCTCTTTCAAA+AGG | 0.387899 | 1_1:-9082999 | None:intergenic |
CAAACAGAAAGAATATTATA+AGG | 0.393872 | 1_1:+9084990 | Msa0006210:CDS |
TTTCTTCTTTCTACTAGAGC+TGG | 0.396370 | 1_1:+9086343 | Msa0006210:CDS |
TTCTACTAGAGCTGGTGGAT+TGG | 0.400884 | 1_1:+9086351 | Msa0006210:CDS |
TCAACTCCTTCCAACATGTT+TGG | 0.401761 | 1_1:-9085236 | None:intergenic |
GGATATCAATCAAGAGCAAC+AGG | 0.403435 | 1_1:+9084480 | Msa0006210:CDS |
AAGAATCTTCAGCATTAAAT+CGG | 0.405258 | 1_1:-9086309 | None:intergenic |
CAGCAATATGAGACAAGAAA+AGG | 0.414335 | 1_1:-9089297 | None:intergenic |
AGACAAATCCTGGAATCATC+AGG | 0.414629 | 1_1:+9086005 | Msa0006210:intron |
CTCTAATAGTGCTACGAGCT+TGG | 0.415041 | 1_1:-9083196 | None:intergenic |
TTTCTGTAGGTTATGTATGT+TGG | 0.417971 | 1_1:+9083167 | Msa0006210:intron |
TGGCAGTATGAAAGGATAGA+TGG | 0.419356 | 1_1:+9086250 | Msa0006210:CDS |
GGCTCTTGAGCGGATTGATT+TGG | 0.421269 | 1_1:-9091800 | None:intergenic |
TTTGTCATTGATAAGGGAAA+AGG | 0.421283 | 1_1:+9089502 | Msa0006210:CDS |
AATGATTCCCCTACATTCTC+AGG | 0.422119 | 1_1:+9089328 | Msa0006210:CDS |
CTGTTATCAGAACTTGTTGT+CGG | 0.424262 | 1_1:-9091821 | None:intergenic |
TTACATAAGTATATGAAATC+AGG | 0.424521 | 1_1:-9082726 | None:intergenic |
GCTTGAGAAGTACAAAGATA+TGG | 0.427283 | 1_1:+9090265 | Msa0006210:CDS |
GTCAGATATTGTTGATGATA+AGG | 0.427532 | 1_1:+9090561 | Msa0006210:CDS |
AGAGAATGCTTGTCCACATT+TGG | 0.430349 | 1_1:+9083008 | Msa0006210:CDS |
TGAACTTCTTACGTTTCTCT+TGG | 0.434712 | 1_1:+9082785 | Msa0006210:CDS |
TCTAATAGTGCTACGAGCTT+GGG | 0.436033 | 1_1:-9083195 | None:intergenic |
TCTATGTTTCAGACAAATCC+TGG | 0.438212 | 1_1:+9085995 | Msa0006210:intron |
TGAGGCAGTGTTGACCGATT+AGG | 0.438438 | 1_1:-9091524 | None:intergenic |
TGATGCATTTCAGAACAATC+TGG | 0.438877 | 1_1:+9084279 | Msa0006210:intron |
AGGCAGTTGATAACTCGTTT+GGG | 0.446189 | 1_1:-9091286 | None:intergenic |
GTGCAAAATGCCTTGGGTAA+AGG | 0.447216 | 1_1:+9088414 | Msa0006210:CDS |
ATCTATCACCTGAGAATGTA+GGG | 0.448011 | 1_1:-9089336 | None:intergenic |
AACAGTTACTACAAGAAAGT+TGG | 0.448062 | 1_1:+9083277 | Msa0006210:CDS |
GCTTCAATGATGTGGTATCT+TGG | 0.453245 | 1_1:-9083346 | None:intergenic |
TCTCCCTAGACTGGTTCAAA+GGG | 0.459359 | 1_1:-9090702 | None:intergenic |
ACGACGATGCCGCTATTGAC+AGG | 0.459469 | 1_1:+9087329 | Msa0006210:CDS |
TCATATACTTATGTAAATGA+AGG | 0.461257 | 1_1:+9082733 | Msa0006210:CDS |
GAATCCTCATGCTGATCTAC+AGG | 0.464174 | 1_1:+9086798 | Msa0006210:CDS |
TTGAATGATGAAGATGAAAG+TGG | 0.464669 | 1_1:+9087474 | Msa0006210:CDS |
AAGAGTTGGACGACATCATC+AGG | 0.470615 | 1_1:+9087242 | Msa0006210:CDS |
TTCTCAATTTAAGGGCATGC+TGG | 0.471110 | 1_1:+9086094 | Msa0006210:CDS |
ATCAGTTGTCATACCATTGT+AGG | 0.471290 | 1_1:+9091844 | Msa0006210:CDS |
CTTGTGACAGTGATCCTAAT+CGG | 0.475655 | 1_1:+9091510 | Msa0006210:CDS |
CTAGAAGGTGTAGGCTCTGA+TGG | 0.475724 | 1_1:+9088652 | Msa0006210:CDS |
ACAAAACTAGAAACCATTGT+TGG | 0.476448 | 1_1:+9091755 | Msa0006210:CDS |
TTCGAGGCTTCATACATTGT+TGG | 0.477515 | 1_1:+9084504 | Msa0006210:CDS |
TTATCATGCTTAGGAAGAGT+TGG | 0.477906 | 1_1:+9087228 | Msa0006210:intron |
GTTATACTTGCTGATGAAAT+GGG | 0.478199 | 1_1:+9082823 | Msa0006210:CDS |
GTCAATAACAGGTTTGGGGT+TGG | 0.481556 | 1_1:+9089073 | Msa0006210:intron |
AGTTGAAGTGCAAAATGCCT+TGG | 0.487529 | 1_1:+9088407 | Msa0006210:CDS |
AACCAGTCTAGGGAGAATAA+TGG | 0.489799 | 1_1:+9090709 | Msa0006210:CDS |
TCACCTTCCATTAACGGCGG+TGG | 0.492523 | 1_1:-9088874 | None:intergenic |
GATCTATCACCTGAGAATGT+AGG | 0.492778 | 1_1:-9089337 | None:intergenic |
CTACATCCATATCAACTTGA+GGG | 0.493022 | 1_1:+9082760 | Msa0006210:CDS |
ATCAAGAGCAACAGGTTTCG+AGG | 0.495690 | 1_1:+9084488 | Msa0006210:CDS |
TTGTCCAACTCGATGAGCTC+TGG | 0.495698 | 1_1:-9086827 | None:intergenic |
GATAAAGATGTATACTTCGC+AGG | 0.496598 | 1_1:-9084537 | None:intergenic |
TTCTCCCTAGACTGGTTCAA+AGG | 0.500929 | 1_1:-9090703 | None:intergenic |
CTTCTTTCTACTAGAGCTGG+TGG | 0.502040 | 1_1:+9086346 | Msa0006210:CDS |
GACATCTTGTCACGGTATGC+AGG | 0.503180 | 1_1:+9090243 | Msa0006210:CDS |
AATCCCCTTTGAACCAGTCT+AGG | 0.503209 | 1_1:+9090698 | Msa0006210:CDS |
TACCCCTGCAGGATTGAAGA+AGG | 0.504929 | 1_1:+9084909 | Msa0006210:intron |
TGAAAATTATTGTGTTTACA+AGG | 0.505863 | 1_1:+9086124 | Msa0006210:CDS |
AAATTGATTTCATAAGAAAG+AGG | 0.507071 | 1_1:+9090842 | Msa0006210:CDS |
TTACAAGCTTTCTTCTTGGA+AGG | 0.510255 | 1_1:-9088748 | None:intergenic |
CGTAAGTCTTCTGCTTCATG+TGG | 0.513190 | 1_1:-9089123 | None:intergenic |
CAGTTTCGCAGTGTAGAAAG+TGG | 0.513245 | 1_1:-9083039 | None:intergenic |
CTTATGCACTTCCTTGACGC+TGG | 0.515128 | 1_1:+9084316 | Msa0006210:CDS |
GATTATGAAGTGGATCATAC+TGG | 0.517268 | 1_1:+9088685 | Msa0006210:CDS |
TACCATTATTCTCCCTAGAC+TGG | 0.518566 | 1_1:-9090711 | None:intergenic |
GACAAGATGAAAGCAATGGC+AGG | 0.518899 | 1_1:+9091228 | Msa0006210:CDS |
TCATGCTGATCTACAGGCTA+TGG | 0.520030 | 1_1:+9086804 | Msa0006210:CDS |
ACCAGCATTGGCAGTATGAA+AGG | 0.520777 | 1_1:+9086242 | Msa0006210:intron |
GTAGATGGTGTTCCAAAAGA+AGG | 0.522402 | 1_1:+9089443 | Msa0006210:intron |
GCCCATAAAGTGGGAGTGCA+TGG | 0.522573 | 1_1:+9083367 | Msa0006210:CDS |
CTTGCTGATGAAATGGGACT+TGG | 0.527291 | 1_1:+9082829 | Msa0006210:CDS |
TGTATACTTCGCAGGAGATG+TGG | 0.527402 | 1_1:-9084529 | None:intergenic |
GAAAGGATAGATGGAAATGT+TGG | 0.527552 | 1_1:+9086259 | Msa0006210:CDS |
GGGAACGCGAATTTGAAAGA+TGG | 0.527655 | 1_1:+9083061 | Msa0006210:CDS |
CTTTCCTTCAGACTTTAATG+AGG | 0.528901 | 1_1:+9088944 | Msa0006210:CDS |
GTTGAAGTGCAAAATGCCTT+GGG | 0.531769 | 1_1:+9088408 | Msa0006210:CDS |
GTATACTTCGCAGGAGATGT+GGG | 0.532884 | 1_1:-9084528 | None:intergenic |
CATCATCAGGTATGGCTCAA+AGG | 0.534600 | 1_1:+9087255 | Msa0006210:CDS |
GTTTCGCTTCCCTTTACCCA+AGG | 0.535839 | 1_1:-9088424 | None:intergenic |
AGCAATATGAGACAAGAAAA+GGG | 0.540144 | 1_1:-9089296 | None:intergenic |
GTTTGAGTAGGTTCATTTCG+AGG | 0.545352 | 1_1:-9091264 | None:intergenic |
GCACTTCCTTGACGCTGGGA+AGG | 0.547359 | 1_1:+9084321 | Msa0006210:CDS |
ACTTTCTACACTGCGAAACT+GGG | 0.548491 | 1_1:+9083041 | Msa0006210:CDS |
CTACTAGAGCTGGTGGATTG+GGG | 0.550233 | 1_1:+9086353 | Msa0006210:CDS |
TTATGCACTTCCTTGACGCT+GGG | 0.551049 | 1_1:+9084317 | Msa0006210:CDS |
AAGTATAACATGAGTTTGCT+TGG | 0.551969 | 1_1:-9082809 | None:intergenic |
GTAAGTCTTCTGCTTCATGT+GGG | 0.552044 | 1_1:-9089122 | None:intergenic |
TATTCAGAGAGTCATCTGTC+AGG | 0.556594 | 1_1:+9090591 | Msa0006210:CDS |
ACTTGTTGTCGGCTCTTGAG+CGG | 0.559813 | 1_1:-9091810 | None:intergenic |
GGAACGCGAATTTGAAAGAT+GGG | 0.560023 | 1_1:+9083062 | Msa0006210:CDS |
ACAAGCATTCTCTTTCAAAA+GGG | 0.561456 | 1_1:-9082998 | None:intergenic |
CATCATTGAAGCCCATAAAG+TGG | 0.562190 | 1_1:+9083357 | Msa0006210:CDS |
GTAACCTCATTAAAGTCTGA+AGG | 0.562752 | 1_1:-9088948 | None:intergenic |
ATCCCCTTTGAACCAGTCTA+GGG | 0.562855 | 1_1:+9090699 | Msa0006210:CDS |
TAACTCGTTTGGGTTTGAGT+AGG | 0.564429 | 1_1:-9091276 | None:intergenic |
ATGGCCAGAGCTCATCGAGT+TGG | 0.567667 | 1_1:+9086823 | Msa0006210:CDS |
AAATTTGCATCAGAGAATCC+TGG | 0.570129 | 1_1:+9090201 | Msa0006210:CDS |
TTTACCTCATTGTAAAGATG+AGG | 0.570902 | 1_1:-9091542 | None:intergenic |
AGTGGAGCAACCACCAAATG+TGG | 0.573936 | 1_1:-9083021 | None:intergenic |
TGTTGGTGGAGATGAAAGAC+AGG | 0.574988 | 1_1:+9086276 | Msa0006210:CDS |
TTGGACGACATCATCAGGTA+TGG | 0.577243 | 1_1:+9087247 | Msa0006210:CDS |
TAACTGTGTCTGCCGTTGCA+AGG | 0.577392 | 1_1:-9086381 | None:intergenic |
ATGATGAAGCTTAAAGAGCA+AGG | 0.577899 | 1_1:+9086053 | Msa0006210:CDS |
ACACAGTTATTATATATGAC+AGG | 0.579097 | 1_1:+9086395 | Msa0006210:CDS |
CTTTATGGGCTTCAATGATG+TGG | 0.580023 | 1_1:-9083354 | None:intergenic |
CGAGCAAGTTGGAGATGAAG+AGG | 0.581640 | 1_1:+9087446 | Msa0006210:CDS |
TTACCATCGCTAGGACAAGT+TGG | 0.581980 | 1_1:+9090637 | Msa0006210:CDS |
AGGATAGATGGAAATGTTGG+TGG | 0.587174 | 1_1:+9086262 | Msa0006210:CDS |
CGAGGAAGATGATTATGAAG+TGG | 0.592183 | 1_1:+9088675 | Msa0006210:CDS |
TAAGGCATGGATATGGAAAG+TGG | 0.594164 | 1_1:+9090539 | Msa0006210:intron |
GACTAACCTTCCCAGCGTCA+AGG | 0.595338 | 1_1:-9084327 | None:intergenic |
TTTGCTCGTCTAGAAGGTGT+AGG | 0.596643 | 1_1:+9088643 | Msa0006210:CDS |
TGATGAAGCTTAAAGAGCAA+GGG | 0.597614 | 1_1:+9086054 | Msa0006210:CDS |
TACATGCAGATAGTTGATGA+AGG | 0.599170 | 1_1:+9083529 | Msa0006210:intron |
TTTGTCGACAAGTCCAACAA+TGG | 0.599234 | 1_1:-9091768 | None:intergenic |
TAAGTCTTCTGCTTCATGTG+GGG | 0.601404 | 1_1:-9089121 | None:intergenic |
GATAAAGTCGAGGCTTCAGA+AGG | 0.601948 | 1_1:+9088336 | Msa0006210:CDS |
GTTAGTCAATAACAGGTTTG+GGG | 0.604043 | 1_1:+9089069 | Msa0006210:intron |
ATCATTGAAGCCCATAAAGT+GGG | 0.605724 | 1_1:+9083358 | Msa0006210:CDS |
GAGAAGTACAAAGATATGGA+AGG | 0.606067 | 1_1:+9090269 | Msa0006210:CDS |
TGAATACGTTGATAAAGTCG+AGG | 0.607587 | 1_1:+9088326 | Msa0006210:CDS |
GAATGCTTGTCCACATTTGG+TGG | 0.609246 | 1_1:+9083011 | Msa0006210:CDS |
AATCCACCGCCGTTAATGGA+AGG | 0.610770 | 1_1:+9088871 | Msa0006210:CDS |
AGGTGTAGGCTCTGATGGCG+AGG | 0.610777 | 1_1:+9088657 | Msa0006210:CDS |
ACTACATCCATATCAACTTG+AGG | 0.610933 | 1_1:+9082759 | Msa0006210:CDS |
TTGTTGGATCGCGAGCAAGT+TGG | 0.619652 | 1_1:+9087435 | Msa0006210:CDS |
ATATAAATATCTGCCTACAA+TGG | 0.620206 | 1_1:-9091857 | None:intergenic |
GACAAATCCTGGAATCATCA+GGG | 0.621226 | 1_1:+9086006 | Msa0006210:intron |
ATGTTGTCATCCAAACATGT+TGG | 0.622207 | 1_1:+9085226 | Msa0006210:CDS |
TGGTGCAAATATGCCAAATG+TGG | 0.625849 | 1_1:+9090675 | Msa0006210:CDS |
GGCCTACCAGTAAAGTTGTG+CGG | 0.626895 | 1_1:-9088446 | None:intergenic |
TGTCATCCAAACATGTTGGA+AGG | 0.628344 | 1_1:+9085230 | Msa0006210:CDS |
GCAGCAGTTAATGGAGCACA+TGG | 0.629634 | 1_1:+9090739 | Msa0006210:CDS |
GATATATTAACTCGCCGTGG+TGG | 0.629717 | 1_1:+9085033 | Msa0006210:CDS |
GCTGATGAGAATGATGTGGC+CGG | 0.632766 | 1_1:+9087286 | Msa0006210:CDS |
ACAAGATGAAAGCAATGGCA+GGG | 0.636829 | 1_1:+9091229 | Msa0006210:CDS |
CCGCCGTTAATGGAAGGTGA+AGG | 0.637565 | 1_1:+9088877 | Msa0006210:CDS |
GAGCCAACTTGTCCTAGCGA+TGG | 0.639701 | 1_1:-9090640 | None:intergenic |
ATCTTACTTGTGCTCCACCA+CGG | 0.642674 | 1_1:-9085047 | None:intergenic |
TTCATAAAGTTACCATCGCT+AGG | 0.645494 | 1_1:+9090628 | Msa0006210:CDS |
GTGGAGATGAAAGACAGGTA+CGG | 0.645740 | 1_1:+9086281 | Msa0006210:CDS |
TTTCAGACGACATCTTGTCA+CGG | 0.646023 | 1_1:+9090235 | Msa0006210:CDS |
GCAGGACAAGATGAAAGCAA+TGG | 0.652998 | 1_1:+9091224 | Msa0006210:intron |
TTGACAGATGTGCAATGCTG+TGG | 0.664356 | 1_1:+9091685 | Msa0006210:intron |
CTCCCTAGACTGGTTCAAAG+GGG | 0.666240 | 1_1:-9090701 | None:intergenic |
ACTTTGTTACCTGTCAATAG+CGG | 0.668488 | 1_1:-9087338 | None:intergenic |
TATGATATATTAACTCGCCG+TGG | 0.669438 | 1_1:+9085030 | Msa0006210:CDS |
ATTGGGGATAAACCTTGCAA+CGG | 0.673951 | 1_1:+9086369 | Msa0006210:CDS |
CCTTCACCTTCCATTAACGG+CGG | 0.674908 | 1_1:-9088877 | None:intergenic |
ATACATACAACATTCATCTG+AGG | 0.676161 | 1_1:-9083087 | None:intergenic |
ACTGCCTCATCTTTACAATG+AGG | 0.677059 | 1_1:+9091538 | Msa0006210:CDS |
TATACTTCGCAGGAGATGTG+GGG | 0.683459 | 1_1:-9084527 | None:intergenic |
TCGAGTTGGACAAACTAACA+AGG | 0.691334 | 1_1:+9086837 | Msa0006210:CDS |
ATAGCCTGTAGATCAGCATG+AGG | 0.700568 | 1_1:-9086802 | None:intergenic |
ATTTGCTGATGAGAATGATG+TGG | 0.705162 | 1_1:+9087282 | Msa0006210:CDS |
TCTATCACCTGAGAATGTAG+GGG | 0.707255 | 1_1:-9089335 | None:intergenic |
TATGAAGTGGATCATACTGG+CGG | 0.768694 | 1_1:+9088688 | Msa0006210:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAGATATTTATTTCATAATT+AGG | - | chr1_1:9084057-9084076 | None:intergenic | 10.0% |
!!! | ATGAAATAAATATCTTTTAA+TGG | + | chr1_1:9084061-9084080 | Msa0006210:intron | 10.0% |
!! | TAAATTTCTATTATAAATAC+TGG | + | chr1_1:9085315-9085334 | Msa0006210:intron | 10.0% |
!! | AAAAAATTTCAAAATATGAA+GGG | - | chr1_1:9086424-9086443 | None:intergenic | 10.0% |
!! | TAAAAAATTTCAAAATATGA+AGG | - | chr1_1:9086425-9086444 | None:intergenic | 10.0% |
!!! | ATTTTATATATTGTCTAATT+TGG | + | chr1_1:9086725-9086744 | Msa0006210:intron | 10.0% |
!!! | TTTTCTAATTTTAAAACAAT+TGG | - | chr1_1:9089637-9089656 | None:intergenic | 10.0% |
!! | TAATAATTCATATAATCAAT+TGG | - | chr1_1:9090042-9090061 | None:intergenic | 10.0% |
!! | AGTAAAAAATTAATGTAAAT+AGG | - | chr1_1:9090120-9090139 | None:intergenic | 10.0% |
!! | TTTCATTAAATGAAATAAAA+TGG | - | chr1_1:9090435-9090454 | None:intergenic | 10.0% |
!! | TGAATTAAGAATAATAGTAA+AGG | - | chr1_1:9082896-9082915 | None:intergenic | 15.0% |
!! | ATTTACAATTTATTTACTGA+TGG | - | chr1_1:9083790-9083809 | None:intergenic | 15.0% |
!! | ATCAGTAAATAAATTGTAAA+TGG | + | chr1_1:9083789-9083808 | Msa0006210:intron | 15.0% |
!! | TATATCAGCTTAAAAAAATT+TGG | + | chr1_1:9084831-9084850 | Msa0006210:intron | 15.0% |
!!! | AAAAAATTTGGATCTTATTT+TGG | + | chr1_1:9084843-9084862 | Msa0006210:intron | 15.0% |
!! | ATTAAGAATATAACAACAAA+AGG | - | chr1_1:9085093-9085112 | None:intergenic | 15.0% |
!!! | TTTTGTTGTTATATTCTTAA+TGG | + | chr1_1:9085092-9085111 | Msa0006210:intron | 15.0% |
!!! | TTAATTTCTAAGAGAATTTT+TGG | - | chr1_1:9085542-9085561 | None:intergenic | 15.0% |
!! | CTCTTAGAAATTAATAATTA+AGG | + | chr1_1:9085548-9085567 | Msa0006210:intron | 15.0% |
!!! | GAAATTAATAATTAAGGTTT+TGG | + | chr1_1:9085554-9085573 | Msa0006210:intron | 15.0% |
!!! | TTTTTTTTTCTTTTTCTGAT+TGG | + | chr1_1:9085948-9085967 | Msa0006210:intron | 15.0% |
!!! | CTTATATTTTCTCAATTTAA+GGG | + | chr1_1:9086086-9086105 | Msa0006210:CDS | 15.0% |
!! | CAAAAATTAGTTCAAAAATT+AGG | + | chr1_1:9087908-9087927 | Msa0006210:intron | 15.0% |
!!! | AGATTATTTTAAAAGATTTG+AGG | - | chr1_1:9088124-9088143 | None:intergenic | 15.0% |
!!! | TATCATTTCATTGATAATAT+TGG | + | chr1_1:9088789-9088808 | Msa0006210:intron | 15.0% |
!! | AATAAGTTAACTGAAAATAT+TGG | - | chr1_1:9089399-9089418 | None:intergenic | 15.0% |
!! | ATTAAATGAAATAAAATGGA+GGG | - | chr1_1:9090431-9090450 | None:intergenic | 15.0% |
!!! | TACAATTAAATCTTTGATTT+GGG | - | chr1_1:9091446-9091465 | None:intergenic | 15.0% |
!! | TTACAATTAAATCTTTGATT+TGG | - | chr1_1:9091447-9091466 | None:intergenic | 15.0% |
!! | TTACATAAGTATATGAAATC+AGG | - | chr1_1:9082729-9082748 | None:intergenic | 20.0% |
!! | TCATATACTTATGTAAATGA+AGG | + | chr1_1:9082733-9082752 | Msa0006210:CDS | 20.0% |
!! | TAATGTATGTTAATTTCTGT+AGG | + | chr1_1:9083154-9083173 | Msa0006210:intron | 20.0% |
!! | ACAAAAGAGATTTAATTAGA+TGG | - | chr1_1:9083443-9083462 | None:intergenic | 20.0% |
!!! | AATTTTAAATAAACCTGAAG+AGG | - | chr1_1:9083640-9083659 | None:intergenic | 20.0% |
!!! | TTCGTATTTAAGATGATATA+TGG | + | chr1_1:9083751-9083770 | Msa0006210:intron | 20.0% |
!!! | TATTTAAGATGATATATGGA+TGG | + | chr1_1:9083755-9083774 | Msa0006210:intron | 20.0% |
!! | GTAAATAAATTGTAAATGGA+TGG | + | chr1_1:9083793-9083812 | Msa0006210:intron | 20.0% |
!!! | ATTTTTTAGTGGCTTATAAA+TGG | + | chr1_1:9083821-9083840 | Msa0006210:intron | 20.0% |
!! | TAAAAAATGTGGTAATACTA+GGG | - | chr1_1:9083916-9083935 | None:intergenic | 20.0% |
!!! | TATTATTGATTTTTACATCC+TGG | + | chr1_1:9084205-9084224 | Msa0006210:intron | 20.0% |
!!! | TCATACTTTTTTCATAGTAT+AGG | - | chr1_1:9084358-9084377 | None:intergenic | 20.0% |
!! | TGTATCTAATATATCCATAA+AGG | + | chr1_1:9084384-9084403 | Msa0006210:intron | 20.0% |
!! | CAAACAGAAAGAATATTATA+AGG | + | chr1_1:9084990-9085009 | Msa0006210:CDS | 20.0% |
!! | ATTAATTATTCCTGTGTTTA+TGG | + | chr1_1:9085421-9085440 | Msa0006210:intron | 20.0% |
!!! | AAACATAAAAAGACTTGTTT+TGG | - | chr1_1:9085449-9085468 | None:intergenic | 20.0% |
!!! | ATTAATAATTAAGGTTTTGG+TGG | + | chr1_1:9085557-9085576 | Msa0006210:intron | 20.0% |
!!! | TTAATAATTAAGGTTTTGGT+GGG | + | chr1_1:9085558-9085577 | Msa0006210:intron | 20.0% |
!! | GAAACATAGAAAAATGAAAA+AGG | - | chr1_1:9085985-9086004 | None:intergenic | 20.0% |
!! | CCTTAAATTGAGAAAATATA+AGG | - | chr1_1:9086088-9086107 | None:intergenic | 20.0% |
!!! | CCTTATATTTTCTCAATTTA+AGG | + | chr1_1:9086085-9086104 | Msa0006210:CDS | 20.0% |
!! | TGAAAATTATTGTGTTTACA+AGG | + | chr1_1:9086124-9086143 | Msa0006210:CDS | 20.0% |
!! | TAAAACACAACAAAATTCAA+CGG | - | chr1_1:9086195-9086214 | None:intergenic | 20.0% |
!! | GAAGTATACTTATATTCATA+TGG | + | chr1_1:9086616-9086635 | Msa0006210:intron | 20.0% |
!!! | TTTTTTTCACTAATATACAG+TGG | + | chr1_1:9086867-9086886 | Msa0006210:intron | 20.0% |
!!! | TTTTTGTTTGTCAAACATTA+TGG | + | chr1_1:9086924-9086943 | Msa0006210:intron | 20.0% |
!! | CAAAATATTAAACAGGTAAT+AGG | + | chr1_1:9087140-9087159 | Msa0006210:intron | 20.0% |
!! | ATAATCATATGTTATACTTC+AGG | - | chr1_1:9087372-9087391 | None:intergenic | 20.0% |
!!! | CTTCTAATTTGATTTGTATT+TGG | + | chr1_1:9087549-9087568 | Msa0006210:intron | 20.0% |
!!! | TTTGGTCATGTATATTTTTT+TGG | + | chr1_1:9087567-9087586 | Msa0006210:intron | 20.0% |
!! | CTTGTATATATTCTAACTAA+AGG | - | chr1_1:9087947-9087966 | None:intergenic | 20.0% |
!! | AAAAGATTTGAGGATAAAAT+GGG | - | chr1_1:9088114-9088133 | None:intergenic | 20.0% |
!! | TAAAAGATTTGAGGATAAAA+TGG | - | chr1_1:9088115-9088134 | None:intergenic | 20.0% |
!!! | ATAACTTGTATTAGTATACA+AGG | + | chr1_1:9088487-9088506 | Msa0006210:intron | 20.0% |
!!! | TAACTTGTATTAGTATACAA+GGG | + | chr1_1:9088488-9088507 | Msa0006210:intron | 20.0% |
!!! | GTCTTTTATAATTATCTGAT+TGG | - | chr1_1:9089957-9089976 | None:intergenic | 20.0% |
!! | AATGTAAATAGGATAGTTAT+GGG | - | chr1_1:9090109-9090128 | None:intergenic | 20.0% |
!! | TAATGTAAATAGGATAGTTA+TGG | - | chr1_1:9090110-9090129 | None:intergenic | 20.0% |
!!! | AAGTGTCTTTTAATAGTTAT+AGG | + | chr1_1:9090358-9090377 | Msa0006210:intron | 20.0% |
!! | CATTAAATGAAATAAAATGG+AGG | - | chr1_1:9090432-9090451 | None:intergenic | 20.0% |
!!! | TGCTTTTTTGTAATCTTTAT+AGG | + | chr1_1:9090473-9090492 | Msa0006210:intron | 20.0% |
!!! | AACATAGTTCTTTTCTATTA+AGG | + | chr1_1:9090521-9090540 | Msa0006210:intron | 20.0% |
!!! | AAATTGATTTCATAAGAAAG+AGG | + | chr1_1:9090842-9090861 | Msa0006210:CDS | 20.0% |
!!! | ATACTTTGTTTATTTCTCTT+TGG | + | chr1_1:9090959-9090978 | Msa0006210:intron | 20.0% |
!!! | TGATAATTGATGACAATAAT+TGG | - | chr1_1:9091044-9091063 | None:intergenic | 20.0% |
!!! | ATACTTATTTTTTCAAGTTG+AGG | - | chr1_1:9091309-9091328 | None:intergenic | 20.0% |
! | TAAGAAAGCAATACTTTGTA+TGG | - | chr1_1:9082974-9082993 | None:intergenic | 25.0% |
!! | TTCTTTTTCTTGTTCTTCTT+CGG | - | chr1_1:9083248-9083267 | None:intergenic | 25.0% |
!!! | CTTGTAGTAACTGTTTTTTT+AGG | - | chr1_1:9083272-9083291 | None:intergenic | 25.0% |
!!! | GGATGGATTTTATTTTTTAG+TGG | + | chr1_1:9083810-9083829 | Msa0006210:intron | 25.0% |
! | TTTGTTTGGATTATAATGCA+TGG | - | chr1_1:9083866-9083885 | None:intergenic | 25.0% |
! | GCATTATAATCCAAACAAAA+TGG | + | chr1_1:9083867-9083886 | Msa0006210:intron | 25.0% |
! | CTAAAAAATGTGGTAATACT+AGG | - | chr1_1:9083917-9083936 | None:intergenic | 25.0% |
! | CATGTAAAAGCTAAAAAATG+TGG | - | chr1_1:9083927-9083946 | None:intergenic | 25.0% |
! | CTCAATTAGATTAGATTCAA+AGG | + | chr1_1:9083980-9083999 | Msa0006210:intron | 25.0% |
! | AAATCAATAATATGCTCCTT+AGG | - | chr1_1:9084197-9084216 | None:intergenic | 25.0% |
!! | TTGATACTGGATGAAATTTT+GGG | + | chr1_1:9084786-9084805 | Msa0006210:intron | 25.0% |
! | TTCTCTTAACAATGTTGTTA+TGG | + | chr1_1:9085190-9085209 | Msa0006210:CDS | 25.0% |
!! | ACAAGTCTTTTTATGTTTGA+AGG | + | chr1_1:9085451-9085470 | Msa0006210:intron | 25.0% |
!!! | TAATAATTAAGGTTTTGGTG+GGG | + | chr1_1:9085559-9085578 | Msa0006210:intron | 25.0% |
! | ATTTAAGAGTAAAAACAGTG+TGG | + | chr1_1:9085593-9085612 | Msa0006210:intron | 25.0% |
! | TTGTAAATTAAAGACACCAA+TGG | + | chr1_1:9085711-9085730 | Msa0006210:intron | 25.0% |
! | TACTAACAGTAAAAATCCAT+TGG | - | chr1_1:9085730-9085749 | None:intergenic | 25.0% |
! | TATTGTAATTACTGACCTTT+CGG | + | chr1_1:9086161-9086180 | Msa0006210:intron | 25.0% |
! | AAGAATCTTCAGCATTAAAT+CGG | - | chr1_1:9086312-9086331 | None:intergenic | 25.0% |
! | ACACAGTTATTATATATGAC+AGG | + | chr1_1:9086395-9086414 | Msa0006210:CDS | 25.0% |
!! | AATATACAGTGGTTTTTGTT+TGG | + | chr1_1:9086878-9086897 | Msa0006210:intron | 25.0% |
! | AAAGGCTCAAAATATTAAAC+AGG | + | chr1_1:9087133-9087152 | Msa0006210:intron | 25.0% |
! | TTCTGATTATTATCATGCTT+AGG | + | chr1_1:9087219-9087238 | Msa0006210:intron | 25.0% |
!! | AGAAGAGTATATAAAGAGTT+AGG | + | chr1_1:9087796-9087815 | Msa0006210:intron | 25.0% |
!! | TTTCATAAAGAAGCAGATTT+TGG | - | chr1_1:9088008-9088027 | None:intergenic | 25.0% |
! | TGATGTTGAATTAAGATTGT+AGG | - | chr1_1:9088197-9088216 | None:intergenic | 25.0% |
! | AGTTATACAAGTAAATGACA+CGG | - | chr1_1:9088473-9088492 | None:intergenic | 25.0% |
! | TCAACAAAAACACAATCAAA+AGG | - | chr1_1:9088569-9088588 | None:intergenic | 25.0% |
!!! | TTTTGATTGTGTTTTTGTTG+AGG | + | chr1_1:9088568-9088587 | Msa0006210:intron | 25.0% |
! | TATTTGCAGTTTATCTCATT+TGG | + | chr1_1:9089047-9089066 | Msa0006210:intron | 25.0% |
! | TTAGAATATGAGACATGTTA+TGG | - | chr1_1:9089176-9089195 | None:intergenic | 25.0% |
!!! | TCGATCTATATATTTTGAAC+AGG | + | chr1_1:9089266-9089285 | Msa0006210:intron | 25.0% |
!!! | CTATATATTTTGAACAGGTA+TGG | + | chr1_1:9089271-9089290 | Msa0006210:intron | 25.0% |
! | GAGAAATACTACAAGAATAA+GGG | - | chr1_1:9089362-9089381 | None:intergenic | 25.0% |
! | AGAGAAATACTACAAGAATA+AGG | - | chr1_1:9089363-9089382 | None:intergenic | 25.0% |
!!! | TCTATTTTAAGTCCTTCTTT+TGG | - | chr1_1:9089458-9089477 | None:intergenic | 25.0% |
!! | TGAAGTACTTGTTAGAATAT+CGG | + | chr1_1:9089478-9089497 | Msa0006210:CDS | 25.0% |
! | TTATATGACCATTTCAAGAA+AGG | - | chr1_1:9089675-9089694 | None:intergenic | 25.0% |
! | GAAATGGTCATATAAATTTC+CGG | + | chr1_1:9089680-9089699 | Msa0006210:intron | 25.0% |
! | AAATGGTCATATAAATTTCC+GGG | + | chr1_1:9089681-9089700 | Msa0006210:intron | 25.0% |
! | AATGAAATATAACTTATGCC+CGG | - | chr1_1:9089702-9089721 | None:intergenic | 25.0% |
! | ATGTTAACATAGAATGCATA+TGG | + | chr1_1:9089743-9089762 | Msa0006210:intron | 25.0% |
! | TTACTAGTGTCATGTAAATA+CGG | - | chr1_1:9090086-9090105 | None:intergenic | 25.0% |
! | GAAACATATTCATCAACTAA+AGG | - | chr1_1:9090153-9090172 | None:intergenic | 25.0% |
! | ATAGAAAAGAACTATGTTAG+AGG | - | chr1_1:9090519-9090538 | None:intergenic | 25.0% |
! | TCTAAATTGCGATAATAGAT+CGG | - | chr1_1:9090806-9090825 | None:intergenic | 25.0% |
! | ATTGTCATCAATTATCAACT+TGG | + | chr1_1:9091047-9091066 | Msa0006210:intron | 25.0% |
! | GGTGATTTATATATGAATGA+TGG | + | chr1_1:9091595-9091614 | Msa0006210:intron | 25.0% |
! | AAGTATAACATGAGTTTGCT+TGG | - | chr1_1:9082812-9082831 | None:intergenic | 30.0% |
! | TGTTATACTTGCTGATGAAA+TGG | + | chr1_1:9082822-9082841 | Msa0006210:CDS | 30.0% |
! | GTTATACTTGCTGATGAAAT+GGG | + | chr1_1:9082823-9082842 | Msa0006210:CDS | 30.0% |
TAGTAAAGGACACACATATT+AGG | - | chr1_1:9082882-9082901 | None:intergenic | 30.0% | |
ACAAGCATTCTCTTTCAAAA+GGG | - | chr1_1:9083001-9083020 | None:intergenic | 30.0% | |
ATACATACAACATTCATCTG+AGG | - | chr1_1:9083090-9083109 | None:intergenic | 30.0% | |
TTTCTGTAGGTTATGTATGT+TGG | + | chr1_1:9083167-9083186 | Msa0006210:intron | 30.0% | |
AACAGTTACTACAAGAAAGT+TGG | + | chr1_1:9083277-9083296 | Msa0006210:CDS | 30.0% | |
! | GATGGTAAGTAGAATTTTAC+TGG | - | chr1_1:9083425-9083444 | None:intergenic | 30.0% |
!!! | TTGAATCCTTGTTTTTGAGA+CGG | - | chr1_1:9083558-9083577 | None:intergenic | 30.0% |
!! | TTGAGTTTTATGTTGGAAGT+TGG | + | chr1_1:9084236-9084255 | Msa0006210:intron | 30.0% |
TAAGATATGTTGGACCTTTA+TGG | - | chr1_1:9084401-9084420 | None:intergenic | 30.0% | |
TGAAAGTTCGTAAGATATGT+TGG | - | chr1_1:9084411-9084430 | None:intergenic | 30.0% | |
TGATATCCTTAAACTCTTCT+TGG | - | chr1_1:9084468-9084487 | None:intergenic | 30.0% | |
TATAATAGCACATGCTCTAT+TGG | + | chr1_1:9084601-9084620 | Msa0006210:intron | 30.0% | |
! | GTTGATACTGGATGAAATTT+TGG | + | chr1_1:9084785-9084804 | Msa0006210:intron | 30.0% |
!!! | CTTATTTTGGCTCACTAAAT+AGG | + | chr1_1:9084856-9084875 | Msa0006210:intron | 30.0% |
! | AAATAGGACTATCTGAAATG+TGG | + | chr1_1:9084872-9084891 | Msa0006210:intron | 30.0% |
!! | ATAATAAGCTCCTTTTTAGG+AGG | - | chr1_1:9084952-9084971 | None:intergenic | 30.0% |
! | CGTATAATAAGCTCCTTTTT+AGG | - | chr1_1:9084955-9084974 | None:intergenic | 30.0% |
ACAAGATTTAGCACCAAATA+AGG | - | chr1_1:9085348-9085367 | None:intergenic | 30.0% | |
TGCTAACTTTCTTAACTAAG+AGG | + | chr1_1:9085394-9085413 | Msa0006210:intron | 30.0% | |
!! | AATAATTAAGGTTTTGGTGG+GGG | + | chr1_1:9085560-9085579 | Msa0006210:intron | 30.0% |
CTGCATAAAAACTTTCAGAA+TGG | + | chr1_1:9085821-9085840 | Msa0006210:intron | 30.0% | |
TTTGTTAAAAACACCAGCAT+TGG | + | chr1_1:9086230-9086249 | Msa0006210:intron | 30.0% | |
TCTGTTAATCAAGTAACGTA+GGG | - | chr1_1:9086472-9086491 | None:intergenic | 30.0% | |
TACGTTACTTGATTAACAGA+GGG | + | chr1_1:9086472-9086491 | Msa0006210:intron | 30.0% | |
TTTCTTAGCTCATTTCTTTC+TGG | + | chr1_1:9086567-9086586 | Msa0006210:intron | 30.0% | |
AACTGCTATTCTATAGTGAT+TGG | + | chr1_1:9086776-9086795 | Msa0006210:intron | 30.0% | |
!!! | TGTTTCAGGTGTTGATTTTT+AGG | + | chr1_1:9087027-9087046 | Msa0006210:intron | 30.0% |
!! | ATTTTTAGGCTTATAACACG+AGG | + | chr1_1:9087041-9087060 | Msa0006210:intron | 30.0% |
AACAATTGAAGAAAGGATGA+TGG | + | chr1_1:9087064-9087083 | Msa0006210:intron | 30.0% | |
GGAAATAACTAAGAAGAAGA+TGG | + | chr1_1:9087085-9087104 | Msa0006210:intron | 30.0% | |
TTGAATGATGAAGATGAAAG+TGG | + | chr1_1:9087474-9087493 | Msa0006210:CDS | 30.0% | |
! | ATGGAAAATCTGTGAGTTTT+AGG | - | chr1_1:9087676-9087695 | None:intergenic | 30.0% |
TTAGTTCAATCATGCTGAAT+TGG | + | chr1_1:9088056-9088075 | Msa0006210:intron | 30.0% | |
! | AGATTGTAGGAATTGAGTTT+TGG | - | chr1_1:9088184-9088203 | None:intergenic | 30.0% |
! | TCATTTTGCGTTCTTTCTTT+AGG | + | chr1_1:9088252-9088271 | Msa0006210:intron | 30.0% |
CCTAGAACATATTATCTATC+AGG | - | chr1_1:9088296-9088315 | None:intergenic | 30.0% | |
CCTGATAGATAATATGTTCT+AGG | + | chr1_1:9088293-9088312 | Msa0006210:intron | 30.0% | |
! | GATAGATAATATGTTCTAGG+TGG | + | chr1_1:9088296-9088315 | Msa0006210:intron | 30.0% |
! | TTCAGAAGGAAAACACTTTT+GGG | + | chr1_1:9088350-9088369 | Msa0006210:CDS | 30.0% |
! | TTTCCAGATGGTTTCTTTTA+AGG | + | chr1_1:9088612-9088631 | Msa0006210:intron | 30.0% |
! | TTCCAGATGGTTTCTTTTAA+GGG | + | chr1_1:9088613-9088632 | Msa0006210:intron | 30.0% |
TGTATTACAAGCTTTCTTCT+TGG | - | chr1_1:9088755-9088774 | None:intergenic | 30.0% | |
GGAATATTGCTAAAAGTTCT+TGG | + | chr1_1:9088898-9088917 | Msa0006210:CDS | 30.0% | |
! | CTAGTTGTTAGTTTACGATT+AGG | + | chr1_1:9088974-9088993 | Msa0006210:intron | 30.0% |
TCTTTAATACGTAAGGGTTA+GGG | - | chr1_1:9089010-9089029 | None:intergenic | 30.0% | |
TAACCCTTACGTATTAAAGA+GGG | + | chr1_1:9089010-9089029 | Msa0006210:intron | 30.0% | |
!!! | TATTAAAGAGGGCTTTTTCA+TGG | + | chr1_1:9089021-9089040 | Msa0006210:intron | 30.0% |
! | TCATTTGGTTAGTCAATAAC+AGG | + | chr1_1:9089062-9089081 | Msa0006210:intron | 30.0% |
AGCAATATGAGACAAGAAAA+GGG | - | chr1_1:9089299-9089318 | None:intergenic | 30.0% | |
AACTGAAAATATTGGAGAGA+TGG | - | chr1_1:9089391-9089410 | None:intergenic | 30.0% | |
!!! | TATCGGTTTTGTCATTGATA+AGG | + | chr1_1:9089495-9089514 | Msa0006210:CDS | 30.0% |
!! | ATCGGTTTTGTCATTGATAA+GGG | + | chr1_1:9089496-9089515 | Msa0006210:CDS | 30.0% |
TTTGTCATTGATAAGGGAAA+AGG | + | chr1_1:9089502-9089521 | Msa0006210:CDS | 30.0% | |
CATTTCAAGAAAGGAATTCT+AGG | - | chr1_1:9089666-9089685 | None:intergenic | 30.0% | |
CTAGAATTCCTTTCTTGAAA+TGG | + | chr1_1:9089664-9089683 | Msa0006210:intron | 30.0% | |
ATAAACCACTTGAACAAAGA+TGG | - | chr1_1:9089838-9089857 | None:intergenic | 30.0% | |
TTGTTCAAGTGGTTTATTTG+TGG | + | chr1_1:9089841-9089860 | Msa0006210:intron | 30.0% | |
TGTCTTGATCAAGTTCTTAT+GGG | - | chr1_1:9090015-9090034 | None:intergenic | 30.0% | |
ATGTCTTGATCAAGTTCTTA+TGG | - | chr1_1:9090016-9090035 | None:intergenic | 30.0% | |
TGTTTCCTCATCTTCAAATA+TGG | + | chr1_1:9090167-9090186 | Msa0006210:intron | 30.0% | |
TCATTCCATATTTGAAGATG+AGG | - | chr1_1:9090175-9090194 | None:intergenic | 30.0% | |
ATCTTCAAATATGGAATGAC+AGG | + | chr1_1:9090176-9090195 | Msa0006210:intron | 30.0% | |
! | AGTTCTTTTCTATTAAGGCA+TGG | + | chr1_1:9090526-9090545 | Msa0006210:intron | 30.0% |
TTTCTATTAAGGCATGGATA+TGG | + | chr1_1:9090532-9090551 | Msa0006210:intron | 30.0% | |
!! | GTCAGATATTGTTGATGATA+AGG | + | chr1_1:9090561-9090580 | Msa0006210:CDS | 30.0% |
TAAAAAGATTGTGTGTGACA+TGG | - | chr1_1:9090939-9090958 | None:intergenic | 30.0% | |
!! | TATTTCTCTTTGGAATAGAC+AGG | + | chr1_1:9090969-9090988 | Msa0006210:intron | 30.0% |
! | TTTGAGTTTGAAAAGGTTGT+TGG | + | chr1_1:9090993-9091012 | Msa0006210:intron | 30.0% |
!!! | CAAGGTTTGTTTTACACATA+GGG | + | chr1_1:9091113-9091132 | Msa0006210:intron | 30.0% |
AGTACAATACAAAGCATGAT+TGG | + | chr1_1:9091146-9091165 | Msa0006210:intron | 30.0% | |
!! | TTTCTTTGAAGACCTTTTCT+CGG | + | chr1_1:9091397-9091416 | Msa0006210:intron | 30.0% |
TTTACCTCATTGTAAAGATG+AGG | - | chr1_1:9091545-9091564 | None:intergenic | 30.0% | |
TGCACATCTGTCAATATAAA+GGG | - | chr1_1:9091679-9091698 | None:intergenic | 30.0% | |
TTGCACATCTGTCAATATAA+AGG | - | chr1_1:9091680-9091699 | None:intergenic | 30.0% | |
ACAAAACTAGAAACCATTGT+TGG | + | chr1_1:9091755-9091774 | Msa0006210:CDS | 30.0% | |
ACTACATCCATATCAACTTG+AGG | + | chr1_1:9082759-9082778 | Msa0006210:CDS | 35.0% | |
CTACATCCATATCAACTTGA+GGG | + | chr1_1:9082760-9082779 | Msa0006210:CDS | 35.0% | |
!! | TTCAATCCCTCAAGTTGATA+TGG | - | chr1_1:9082769-9082788 | None:intergenic | 35.0% |
TGAACTTCTTACGTTTCTCT+TGG | + | chr1_1:9082785-9082804 | Msa0006210:CDS | 35.0% | |
GACAAGCATTCTCTTTCAAA+AGG | - | chr1_1:9083002-9083021 | None:intergenic | 35.0% | |
TTGTTCTTCTTCGGATTCTT+CGG | - | chr1_1:9083239-9083258 | None:intergenic | 35.0% | |
ATCATTGAAGCCCATAAAGT+GGG | + | chr1_1:9083358-9083377 | Msa0006210:CDS | 35.0% | |
AATTCTACTCACCATTCTAG+TGG | + | chr1_1:9083393-9083412 | Msa0006210:intron | 35.0% | |
!! | TACATGCAGATAGTTGATGA+AGG | + | chr1_1:9083529-9083548 | Msa0006210:intron | 35.0% |
AACATCCAATAAGTCTGGTA+TGG | - | chr1_1:9083667-9083686 | None:intergenic | 35.0% | |
ACATCAACATCCAATAAGTC+TGG | - | chr1_1:9083672-9083691 | None:intergenic | 35.0% | |
! | GTTGATGTCTCGACTTTTTA+AGG | + | chr1_1:9083684-9083703 | Msa0006210:intron | 35.0% |
GTAATACTAGGGTTCGAAAA+TGG | - | chr1_1:9083905-9083924 | None:intergenic | 35.0% | |
! | GTAGCAACTTTTCTTACCTA+AGG | + | chr1_1:9084178-9084197 | Msa0006210:intron | 35.0% |
!! | GCATGTGTTGAGTTTTATGT+TGG | + | chr1_1:9084229-9084248 | Msa0006210:intron | 35.0% |
CATCAAACATGTTGTCAAGT+AGG | - | chr1_1:9084264-9084283 | None:intergenic | 35.0% | |
TGATGCATTTCAGAACAATC+TGG | + | chr1_1:9084279-9084298 | Msa0006210:intron | 35.0% | |
TACGAACTTTCAATTGCTTC+TGG | + | chr1_1:9084419-9084438 | Msa0006210:intron | 35.0% | |
TTCAATTGCTTCTGGTAGTT+TGG | + | chr1_1:9084427-9084446 | Msa0006210:intron | 35.0% | |
AGAGTTCCAAGAAGAGTTTA+AGG | + | chr1_1:9084459-9084478 | Msa0006210:CDS | 35.0% | |
GATAAAGATGTATACTTCGC+AGG | - | chr1_1:9084540-9084559 | None:intergenic | 35.0% | |
! | TCTTGAGTAATGGTTGATAC+TGG | + | chr1_1:9084773-9084792 | Msa0006210:intron | 35.0% |
TATGATATATTAACTCGCCG+TGG | + | chr1_1:9085030-9085049 | Msa0006210:CDS | 35.0% | |
ATGTTGTCATCCAAACATGT+TGG | + | chr1_1:9085226-9085245 | Msa0006210:CDS | 35.0% | |
! | TCTGTTTCTTTATGCAGAAC+TGG | - | chr1_1:9085263-9085282 | None:intergenic | 35.0% |
AATTTCAGTTTGCACTCATG+GGG | - | chr1_1:9085519-9085538 | None:intergenic | 35.0% | |
GAATTTCAGTTTGCACTCAT+GGG | - | chr1_1:9085520-9085539 | None:intergenic | 35.0% | |
ATTTACAAACAAGAGATGCG+TGG | - | chr1_1:9085699-9085718 | None:intergenic | 35.0% | |
TCTATGTTTCAGACAAATCC+TGG | + | chr1_1:9085995-9086014 | Msa0006210:intron | 35.0% | |
ATGATGAAGCTTAAAGAGCA+AGG | + | chr1_1:9086053-9086072 | Msa0006210:CDS | 35.0% | |
TGATGAAGCTTAAAGAGCAA+GGG | + | chr1_1:9086054-9086073 | Msa0006210:CDS | 35.0% | |
GAAAGGATAGATGGAAATGT+TGG | + | chr1_1:9086259-9086278 | Msa0006210:CDS | 35.0% | |
TTTCTTCTTTCTACTAGAGC+TGG | + | chr1_1:9086343-9086362 | Msa0006210:CDS | 35.0% | |
CTCTGTTAATCAAGTAACGT+AGG | - | chr1_1:9086473-9086492 | None:intergenic | 35.0% | |
CTACGTTACTTGATTAACAG+AGG | + | chr1_1:9086471-9086490 | Msa0006210:intron | 35.0% | |
AAGAGAAAAACACACACACA+GGG | + | chr1_1:9086509-9086528 | Msa0006210:intron | 35.0% | |
AGTCATGTTAAGCACCATAT+AGG | - | chr1_1:9086541-9086560 | None:intergenic | 35.0% | |
CACATAACTTCTTGTGTTTC+AGG | + | chr1_1:9087013-9087032 | Msa0006210:intron | 35.0% | |
TTATCATGCTTAGGAAGAGT+TGG | + | chr1_1:9087228-9087247 | Msa0006210:intron | 35.0% | |
! | ATTTGCTGATGAGAATGATG+TGG | + | chr1_1:9087282-9087301 | Msa0006210:CDS | 35.0% |
! | ATGAATTTGGCGAGATTTTC+CGG | - | chr1_1:9087308-9087327 | None:intergenic | 35.0% |
ACTTTGTTACCTGTCAATAG+CGG | - | chr1_1:9087341-9087360 | None:intergenic | 35.0% | |
! | TGGATTTCTGAAAGCCTTTA+AGG | + | chr1_1:9087494-9087513 | Msa0006210:CDS | 35.0% |
CATATGAGAGTCAACCTTAA+AGG | - | chr1_1:9087511-9087530 | None:intergenic | 35.0% | |
TAATCCTATCTATCCGATGT+GGG | - | chr1_1:9087773-9087792 | None:intergenic | 35.0% | |
ATAATCCTATCTATCCGATG+TGG | - | chr1_1:9087774-9087793 | None:intergenic | 35.0% | |
CCAATCTGTAACAAATATCG+AGG | - | chr1_1:9087863-9087882 | None:intergenic | 35.0% | |
! | CCTCGATATTTGTTACAGAT+TGG | + | chr1_1:9087860-9087879 | Msa0006210:intron | 35.0% |
GTACTCTATATGTGCGAAAT+AGG | - | chr1_1:9087974-9087993 | None:intergenic | 35.0% | |
TGATTGAACTAAGCATGTCA+AGG | - | chr1_1:9088048-9088067 | None:intergenic | 35.0% | |
!!! | AGGAATTGAGTTTTGGACTA+GGG | - | chr1_1:9088177-9088196 | None:intergenic | 35.0% |
!!! | TAGGAATTGAGTTTTGGACT+AGG | - | chr1_1:9088178-9088197 | None:intergenic | 35.0% |
! | TGAATACGTTGATAAAGTCG+AGG | + | chr1_1:9088326-9088345 | Msa0006210:CDS | 35.0% |
! | CTTCAGAAGGAAAACACTTT+TGG | + | chr1_1:9088349-9088368 | Msa0006210:CDS | 35.0% |
TATACAAGTAAATGACACGG+TGG | - | chr1_1:9088470-9088489 | None:intergenic | 35.0% | |
! | TTTTGTTGAGGTTGTATACG+TGG | + | chr1_1:9088580-9088599 | Msa0006210:intron | 35.0% |
! | TCCAGATGGTTTCTTTTAAG+GGG | + | chr1_1:9088614-9088633 | Msa0006210:intron | 35.0% |
GATTATGAAGTGGATCATAC+TGG | + | chr1_1:9088685-9088704 | Msa0006210:CDS | 35.0% | |
TTACAAGCTTTCTTCTTGGA+AGG | - | chr1_1:9088751-9088770 | None:intergenic | 35.0% | |
ATTCCTTCACCTTCCATTAA+CGG | - | chr1_1:9088883-9088902 | None:intergenic | 35.0% | |
CTTTCCTTCAGACTTTAATG+AGG | + | chr1_1:9088944-9088963 | Msa0006210:CDS | 35.0% | |
GTAACCTCATTAAAGTCTGA+AGG | - | chr1_1:9088951-9088970 | None:intergenic | 35.0% | |
CTCTTTAATACGTAAGGGTT+AGG | - | chr1_1:9089011-9089030 | None:intergenic | 35.0% | |
CTAACCCTTACGTATTAAAG+AGG | + | chr1_1:9089009-9089028 | Msa0006210:intron | 35.0% | |
AAGCCCTCTTTAATACGTAA+GGG | - | chr1_1:9089016-9089035 | None:intergenic | 35.0% | |
AAAGCCCTCTTTAATACGTA+AGG | - | chr1_1:9089017-9089036 | None:intergenic | 35.0% | |
! | TGGTTAGTCAATAACAGGTT+TGG | + | chr1_1:9089067-9089086 | Msa0006210:intron | 35.0% |
! | GGTTAGTCAATAACAGGTTT+GGG | + | chr1_1:9089068-9089087 | Msa0006210:intron | 35.0% |
GTTAGTCAATAACAGGTTTG+GGG | + | chr1_1:9089069-9089088 | Msa0006210:intron | 35.0% | |
CAGCAATATGAGACAAGAAA+AGG | - | chr1_1:9089300-9089319 | None:intergenic | 35.0% | |
ATCTATCACCTGAGAATGTA+GGG | - | chr1_1:9089339-9089358 | None:intergenic | 35.0% | |
CGACTAACTTAAAATACGCA+CGG | - | chr1_1:9089887-9089906 | None:intergenic | 35.0% | |
!!! | TGCGTATTTTAAGTTAGTCG+AGG | + | chr1_1:9089887-9089906 | Msa0006210:intron | 35.0% |
!!! | ATTTTAAGTTAGTCGAGGAC+AGG | + | chr1_1:9089892-9089911 | Msa0006210:intron | 35.0% |
!!! | TTTTAAGTTAGTCGAGGACA+GGG | + | chr1_1:9089893-9089912 | Msa0006210:intron | 35.0% |
AAATTTGCATCAGAGAATCC+TGG | + | chr1_1:9090201-9090220 | Msa0006210:CDS | 35.0% | |
AAGATGTCGTCTGAAAAAAG+TGG | - | chr1_1:9090231-9090250 | None:intergenic | 35.0% | |
! | GCTTGAGAAGTACAAAGATA+TGG | + | chr1_1:9090265-9090284 | Msa0006210:CDS | 35.0% |
! | GAGAAGTACAAAGATATGGA+AGG | + | chr1_1:9090269-9090288 | Msa0006210:CDS | 35.0% |
TTCATAAAGTTACCATCGCT+AGG | + | chr1_1:9090628-9090647 | Msa0006210:CDS | 35.0% | |
! | TTGAGACAATTTTCCAAGAG+AGG | - | chr1_1:9090871-9090890 | None:intergenic | 35.0% |
! | CACTTACAGAGTATTCTTTC+TGG | - | chr1_1:9090906-9090925 | None:intergenic | 35.0% |
! | GACAGGATTTGAGTTTGAAA+AGG | + | chr1_1:9090986-9091005 | Msa0006210:intron | 35.0% |
CCTATGTGTAAAACAAACCT+TGG | - | chr1_1:9091115-9091134 | None:intergenic | 35.0% | |
!!! | CCAAGGTTTGTTTTACACAT+AGG | + | chr1_1:9091112-9091131 | Msa0006210:intron | 35.0% |
CAAAGGAAAAATCCGAGAAA+AGG | - | chr1_1:9091412-9091431 | None:intergenic | 35.0% | |
!!! | TTCCATTTTTTTGCAGCTTC+AGG | + | chr1_1:9091470-9091489 | Msa0006210:intron | 35.0% |
ATGGCTGCATGATACAATAA+TGG | + | chr1_1:9091614-9091633 | Msa0006210:intron | 35.0% | |
!!! | TTCTAGTTTTGTCTGTTCTC+TGG | - | chr1_1:9091747-9091766 | None:intergenic | 35.0% |
!! | CTGTTATCAGAACTTGTTGT+CGG | - | chr1_1:9091824-9091843 | None:intergenic | 35.0% |
! | ATGAAATGGGACTTGGTACT+TGG | + | chr1_1:9082836-9082855 | Msa0006210:intron | 40.0% |
! | TAGCTGAAGCATCACATTGA+TGG | + | chr1_1:9082923-9082942 | Msa0006210:intron | 40.0% |
!!! | TGGCTTGGTTTTTCATCTTC+AGG | + | chr1_1:9082943-9082962 | Msa0006210:intron | 40.0% |
AGAGAATGCTTGTCCACATT+TGG | + | chr1_1:9083008-9083027 | Msa0006210:CDS | 40.0% | |
ACTTTCTACACTGCGAAACT+GGG | + | chr1_1:9083041-9083060 | Msa0006210:CDS | 40.0% | |
GGAACGCGAATTTGAAAGAT+GGG | + | chr1_1:9083062-9083081 | Msa0006210:CDS | 40.0% | |
TCTAATAGTGCTACGAGCTT+GGG | - | chr1_1:9083198-9083217 | None:intergenic | 40.0% | |
GCTTCAATGATGTGGTATCT+TGG | - | chr1_1:9083349-9083368 | None:intergenic | 40.0% | |
CTTTATGGGCTTCAATGATG+TGG | - | chr1_1:9083357-9083376 | None:intergenic | 40.0% | |
CATCATTGAAGCCCATAAAG+TGG | + | chr1_1:9083357-9083376 | Msa0006210:CDS | 40.0% | |
! | ATACATCGTGTGCTTTTGAC+AGG | + | chr1_1:9083610-9083629 | Msa0006210:CDS | 40.0% |
TTACGCCATACCAGACTTAT+TGG | + | chr1_1:9083659-9083678 | Msa0006210:intron | 40.0% | |
! | GGATTAGGCACCATTTTGTT+TGG | - | chr1_1:9083880-9083899 | None:intergenic | 40.0% |
! | GGTTCGAAAATGGATGGATT+AGG | - | chr1_1:9083895-9083914 | None:intergenic | 40.0% |
TACTAGGGTTCGAAAATGGA+TGG | - | chr1_1:9083901-9083920 | None:intergenic | 40.0% | |
TAAAACTCAACACATGCACC+AGG | - | chr1_1:9084226-9084245 | None:intergenic | 40.0% | |
GGATATCAATCAAGAGCAAC+AGG | + | chr1_1:9084480-9084499 | Msa0006210:CDS | 40.0% | |
TTCGAGGCTTCATACATTGT+TGG | + | chr1_1:9084504-9084523 | Msa0006210:CDS | 40.0% | |
TAAGAAACCTCGATCATGTG+AGG | - | chr1_1:9084670-9084689 | None:intergenic | 40.0% | |
! | TGAGAACAGAAGAAGCACAA+AGG | - | chr1_1:9084698-9084717 | None:intergenic | 40.0% |
TCGTGATCACTCTTGAGTAA+TGG | + | chr1_1:9084763-9084782 | Msa0006210:intron | 40.0% | |
!! | CAATTGTTTTATACCCCTGC+AGG | + | chr1_1:9084898-9084917 | Msa0006210:intron | 40.0% |
GACTGAACTACCTCCTAAAA+AGG | + | chr1_1:9084939-9084958 | Msa0006210:CDS | 40.0% | |
TGTCATCCAAACATGTTGGA+AGG | + | chr1_1:9085230-9085249 | Msa0006210:CDS | 40.0% | |
TCAACTCCTTCCAACATGTT+TGG | - | chr1_1:9085239-9085258 | None:intergenic | 40.0% | |
! | TACTGGTTGCTCTCCTTATT+TGG | + | chr1_1:9085332-9085351 | Msa0006210:intron | 40.0% |
!!! | TGTTTTGGTGCCATAAACAC+AGG | - | chr1_1:9085434-9085453 | None:intergenic | 40.0% |
! | AAGGCATTACTCTAGCACAA+TGG | + | chr1_1:9085470-9085489 | Msa0006210:intron | 40.0% |
ATTACTCTAGCACAATGGTG+TGG | + | chr1_1:9085475-9085494 | Msa0006210:intron | 40.0% | |
GGAATTTCAGTTTGCACTCA+TGG | - | chr1_1:9085521-9085540 | None:intergenic | 40.0% | |
!!! | GTTTTGGTGGGGGTATTTTA+GGG | + | chr1_1:9085570-9085589 | Msa0006210:intron | 40.0% |
TGTAGTACAAGAGGGACTAA+GGG | - | chr1_1:9085660-9085679 | None:intergenic | 40.0% | |
TTGTAGTACAAGAGGGACTA+AGG | - | chr1_1:9085661-9085680 | None:intergenic | 40.0% | |
!! | GGTTGGTTTGTAGTACAAGA+GGG | - | chr1_1:9085668-9085687 | None:intergenic | 40.0% |
!! | TGGTTGGTTTGTAGTACAAG+AGG | - | chr1_1:9085669-9085688 | None:intergenic | 40.0% |
AAGAGATGCGTGGAAATGAT+TGG | - | chr1_1:9085689-9085708 | None:intergenic | 40.0% | |
AGACAAATCCTGGAATCATC+AGG | + | chr1_1:9086005-9086024 | Msa0006210:intron | 40.0% | |
GACAAATCCTGGAATCATCA+GGG | + | chr1_1:9086006-9086025 | Msa0006210:intron | 40.0% | |
ATCAGGGAAGTTGCAATTGT+TGG | + | chr1_1:9086022-9086041 | Msa0006210:CDS | 40.0% | |
! | TTCTCAATTTAAGGGCATGC+TGG | + | chr1_1:9086094-9086113 | Msa0006210:CDS | 40.0% |
TGGCAGTATGAAAGGATAGA+TGG | + | chr1_1:9086250-9086269 | Msa0006210:CDS | 40.0% | |
AGGATAGATGGAAATGTTGG+TGG | + | chr1_1:9086262-9086281 | Msa0006210:CDS | 40.0% | |
ATTGGGGATAAACCTTGCAA+CGG | + | chr1_1:9086369-9086388 | Msa0006210:CDS | 40.0% | |
! | CTGTGTGTGTGTTTTTCTCT+TGG | - | chr1_1:9086510-9086529 | None:intergenic | 40.0% |
CAAGAGAAAAACACACACAC+AGG | + | chr1_1:9086508-9086527 | Msa0006210:intron | 40.0% | |
CTTAGCTCATTTCTTTCTGG+TGG | + | chr1_1:9086570-9086589 | Msa0006210:intron | 40.0% | |
ATATGGTAACCACTAACCAG+TGG | + | chr1_1:9086633-9086652 | Msa0006210:intron | 40.0% | |
TATGGTAACCACTAACCAGT+GGG | + | chr1_1:9086634-9086653 | Msa0006210:intron | 40.0% | |
ATTATAACGTGAGTTCCCAC+TGG | - | chr1_1:9086652-9086671 | None:intergenic | 40.0% | |
!! | TCGAGTTGGACAAACTAACA+AGG | + | chr1_1:9086837-9086856 | Msa0006210:CDS | 40.0% |
CACGAGGAACAATTGAAGAA+AGG | + | chr1_1:9087057-9087076 | Msa0006210:intron | 40.0% | |
GTGTTAGAACACGTAGTTGT+AGG | + | chr1_1:9087107-9087126 | Msa0006210:intron | 40.0% | |
AATACCTATTCACCAACCTC+GGG | - | chr1_1:9087702-9087721 | None:intergenic | 40.0% | |
GAATACCTATTCACCAACCT+CGG | - | chr1_1:9087703-9087722 | None:intergenic | 40.0% | |
AAACTCCCAGATTGTGTTAG+CGG | + | chr1_1:9087724-9087743 | Msa0006210:intron | 40.0% | |
CTAACTCATCCCTACAAAAC+CGG | - | chr1_1:9087839-9087858 | None:intergenic | 40.0% | |
! | AGAAGGAAAACACTTTTGGG+AGG | + | chr1_1:9088353-9088372 | Msa0006210:CDS | 40.0% |
! | GCACTTCAACTTTTTGCTCT+TGG | - | chr1_1:9088398-9088417 | None:intergenic | 40.0% |
AGTTGAAGTGCAAAATGCCT+TGG | + | chr1_1:9088407-9088426 | Msa0006210:CDS | 40.0% | |
GTTGAAGTGCAAAATGCCTT+GGG | + | chr1_1:9088408-9088427 | Msa0006210:CDS | 40.0% | |
TGCAAAATGCCTTGGGTAAA+GGG | + | chr1_1:9088415-9088434 | Msa0006210:CDS | 40.0% | |
!! | CCAGATGGTTTCTTTTAAGG+GGG | + | chr1_1:9088615-9088634 | Msa0006210:intron | 40.0% |
! | GAGAATTTTGCTCGTCTAGA+AGG | + | chr1_1:9088637-9088656 | Msa0006210:CDS | 40.0% |
CGAGGAAGATGATTATGAAG+TGG | + | chr1_1:9088675-9088694 | Msa0006210:CDS | 40.0% | |
TATGAAGTGGATCATACTGG+CGG | + | chr1_1:9088688-9088707 | Msa0006210:CDS | 40.0% | |
TTTCTTCTTGGAAGGTCTTC+TGG | - | chr1_1:9088743-9088762 | None:intergenic | 40.0% | |
TAAGTCTTCTGCTTCATGTG+GGG | - | chr1_1:9089124-9089143 | None:intergenic | 40.0% | |
GTAAGTCTTCTGCTTCATGT+GGG | - | chr1_1:9089125-9089144 | None:intergenic | 40.0% | |
AATGATTCCCCTACATTCTC+AGG | + | chr1_1:9089328-9089347 | Msa0006210:CDS | 40.0% | |
TCTATCACCTGAGAATGTAG+GGG | - | chr1_1:9089338-9089357 | None:intergenic | 40.0% | |
GATCTATCACCTGAGAATGT+AGG | - | chr1_1:9089340-9089359 | None:intergenic | 40.0% | |
ATCTACAGACACGTTTCAAC+AGG | - | chr1_1:9089429-9089448 | None:intergenic | 40.0% | |
TGTTGAAACGTGTCTGTAGA+TGG | + | chr1_1:9089428-9089447 | Msa0006210:intron | 40.0% | |
GTAGATGGTGTTCCAAAAGA+AGG | + | chr1_1:9089443-9089462 | Msa0006210:intron | 40.0% | |
!! | TTTGTGGTTTTGCCTCCTAA+AGG | + | chr1_1:9089857-9089876 | Msa0006210:intron | 40.0% |
AATACGCACGGTTATCCTTT+AGG | - | chr1_1:9089875-9089894 | None:intergenic | 40.0% | |
! | TTTAAGTTAGTCGAGGACAG+GGG | + | chr1_1:9089894-9089913 | Msa0006210:intron | 40.0% |
CTTGATCAAGTTCTTATGGG+AGG | - | chr1_1:9090012-9090031 | None:intergenic | 40.0% | |
TTTCAGACGACATCTTGTCA+CGG | + | chr1_1:9090235-9090254 | Msa0006210:CDS | 40.0% | |
! | ACGTAGACACACACACATTT+TGG | - | chr1_1:9090402-9090421 | None:intergenic | 40.0% |
TAAGGCATGGATATGGAAAG+TGG | + | chr1_1:9090539-9090558 | Msa0006210:intron | 40.0% | |
TATTCAGAGAGTCATCTGTC+AGG | + | chr1_1:9090591-9090610 | Msa0006210:CDS | 40.0% | |
! | GTTGGCTCTCAAGTGAAAAA+TGG | + | chr1_1:9090655-9090674 | Msa0006210:CDS | 40.0% |
TGGTGCAAATATGCCAAATG+TGG | + | chr1_1:9090675-9090694 | Msa0006210:CDS | 40.0% | |
TTCAAAGGGGATTCCACATT+TGG | - | chr1_1:9090691-9090710 | None:intergenic | 40.0% | |
AACCAGTCTAGGGAGAATAA+TGG | + | chr1_1:9090709-9090728 | Msa0006210:CDS | 40.0% | |
TACCATTATTCTCCCTAGAC+TGG | - | chr1_1:9090714-9090733 | None:intergenic | 40.0% | |
AAGAAAGAGGTTTCCTCTCT+TGG | + | chr1_1:9090855-9090874 | Msa0006210:CDS | 40.0% | |
ATGCTCATGTTTAACTGCCA+AGG | + | chr1_1:9091095-9091114 | Msa0006210:intron | 40.0% | |
ACAAGATGAAAGCAATGGCA+GGG | + | chr1_1:9091229-9091248 | Msa0006210:CDS | 40.0% | |
GTTTGAGTAGGTTCATTTCG+AGG | - | chr1_1:9091267-9091286 | None:intergenic | 40.0% | |
! | TAACTCGTTTGGGTTTGAGT+AGG | - | chr1_1:9091279-9091298 | None:intergenic | 40.0% |
!! | AGGCAGTTGATAACTCGTTT+GGG | - | chr1_1:9091289-9091308 | None:intergenic | 40.0% |
CTCCTGAAGCTGCAAAAAAA+TGG | - | chr1_1:9091475-9091494 | None:intergenic | 40.0% | |
CTTGTGACAGTGATCCTAAT+CGG | + | chr1_1:9091510-9091529 | Msa0006210:CDS | 40.0% | |
ACTGCCTCATCTTTACAATG+AGG | + | chr1_1:9091538-9091557 | Msa0006210:CDS | 40.0% | |
TTTGTATCGTCTCTCTTCAG+CGG | + | chr1_1:9091571-9091590 | Msa0006210:intron | 40.0% | |
TTTGTCGACAAGTCCAACAA+TGG | - | chr1_1:9091771-9091790 | None:intergenic | 40.0% | |
CTTGCTGATGAAATGGGACT+TGG | + | chr1_1:9082829-9082848 | Msa0006210:CDS | 45.0% | |
! | GAAGCATCACATTGATGGCT+TGG | + | chr1_1:9082928-9082947 | Msa0006210:intron | 45.0% |
GAATGCTTGTCCACATTTGG+TGG | + | chr1_1:9083011-9083030 | Msa0006210:CDS | 45.0% | |
CAGTTTCGCAGTGTAGAAAG+TGG | - | chr1_1:9083042-9083061 | None:intergenic | 45.0% | |
CACTTTCTACACTGCGAAAC+TGG | + | chr1_1:9083040-9083059 | Msa0006210:CDS | 45.0% | |
GGGAACGCGAATTTGAAAGA+TGG | + | chr1_1:9083061-9083080 | Msa0006210:CDS | 45.0% | |
CTCTAATAGTGCTACGAGCT+TGG | - | chr1_1:9083199-9083218 | None:intergenic | 45.0% | |
ACCATGCACTCCCACTTTAT+GGG | - | chr1_1:9083371-9083390 | None:intergenic | 45.0% | |
TACCATGCACTCCCACTTTA+TGG | - | chr1_1:9083372-9083391 | None:intergenic | 45.0% | |
CTACTCACCATTCTAGTGGT+AGG | + | chr1_1:9083397-9083416 | Msa0006210:intron | 45.0% | |
AGGTCACCGTCTCAAAAACA+AGG | + | chr1_1:9083549-9083568 | Msa0006210:CDS | 45.0% | |
TTTGACAGGAACTCCTCTTC+AGG | + | chr1_1:9083624-9083643 | Msa0006210:CDS | 45.0% | |
TTATGCACTTCCTTGACGCT+GGG | + | chr1_1:9084317-9084336 | Msa0006210:CDS | 45.0% | |
ATCAAGAGCAACAGGTTTCG+AGG | + | chr1_1:9084488-9084507 | Msa0006210:CDS | 45.0% | |
TATACTTCGCAGGAGATGTG+GGG | - | chr1_1:9084530-9084549 | None:intergenic | 45.0% | |
GTATACTTCGCAGGAGATGT+GGG | - | chr1_1:9084531-9084550 | None:intergenic | 45.0% | |
TGTATACTTCGCAGGAGATG+TGG | - | chr1_1:9084532-9084551 | None:intergenic | 45.0% | |
! | CATGTGAGGAGTACAGAAGA+AGG | - | chr1_1:9084656-9084675 | None:intergenic | 45.0% |
CTCAAGAGTGATCACGAACA+CGG | - | chr1_1:9084760-9084779 | None:intergenic | 45.0% | |
ATCCTTCTTCAATCCTGCAG+GGG | - | chr1_1:9084914-9084933 | None:intergenic | 45.0% | |
CATCCTTCTTCAATCCTGCA+GGG | - | chr1_1:9084915-9084934 | None:intergenic | 45.0% | |
ACATCCTTCTTCAATCCTGC+AGG | - | chr1_1:9084916-9084935 | None:intergenic | 45.0% | |
GATATATTAACTCGCCGTGG+TGG | + | chr1_1:9085033-9085052 | Msa0006210:CDS | 45.0% | |
ATCTTACTTGTGCTCCACCA+CGG | - | chr1_1:9085050-9085069 | None:intergenic | 45.0% | |
TAGCACAATGGTGTGGTTCT+TGG | + | chr1_1:9085482-9085501 | Msa0006210:intron | 45.0% | |
!!! | GGTTTTGGTGGGGGTATTTT+AGG | + | chr1_1:9085569-9085588 | Msa0006210:intron | 45.0% |
GATGCGTGGAAATGATTGGT+TGG | - | chr1_1:9085685-9085704 | None:intergenic | 45.0% | |
! | AAACGCTATAGCGGGATAGT+GGG | - | chr1_1:9085854-9085873 | None:intergenic | 45.0% |
TATCCCGCTATAGCGTTTGT+GGG | + | chr1_1:9085856-9085875 | Msa0006210:intron | 45.0% | |
!! | ACCAGCATTGGCAGTATGAA+AGG | + | chr1_1:9086242-9086261 | Msa0006210:intron | 45.0% |
TCCTTTCATACTGCCAATGC+TGG | - | chr1_1:9086246-9086265 | None:intergenic | 45.0% | |
! | TGTTGGTGGAGATGAAAGAC+AGG | + | chr1_1:9086276-9086295 | Msa0006210:CDS | 45.0% |
GTGGAGATGAAAGACAGGTA+CGG | + | chr1_1:9086281-9086300 | Msa0006210:CDS | 45.0% | |
CTTCTTTCTACTAGAGCTGG+TGG | + | chr1_1:9086346-9086365 | Msa0006210:CDS | 45.0% | |
! | TTCTACTAGAGCTGGTGGAT+TGG | + | chr1_1:9086351-9086370 | Msa0006210:CDS | 45.0% |
!! | TCTACTAGAGCTGGTGGATT+GGG | + | chr1_1:9086352-9086371 | Msa0006210:CDS | 45.0% |
ACACAGGGAATGCACCTATA+TGG | + | chr1_1:9086524-9086543 | Msa0006210:intron | 45.0% | |
GAATCCTCATGCTGATCTAC+AGG | + | chr1_1:9086798-9086817 | Msa0006210:CDS | 45.0% | |
ATAGCCTGTAGATCAGCATG+AGG | - | chr1_1:9086805-9086824 | None:intergenic | 45.0% | |
TCATGCTGATCTACAGGCTA+TGG | + | chr1_1:9086804-9086823 | Msa0006210:CDS | 45.0% | |
ACTAAGTGAGGTCTGCTACA+TGG | - | chr1_1:9086961-9086980 | None:intergenic | 45.0% | |
ATGTAGCAGACCTCACTTAG+TGG | + | chr1_1:9086960-9086979 | Msa0006210:intron | 45.0% | |
TGTAGCAGACCTCACTTAGT+GGG | + | chr1_1:9086961-9086980 | Msa0006210:intron | 45.0% | |
AGACCTCACTTAGTGGGATA+AGG | + | chr1_1:9086967-9086986 | Msa0006210:intron | 45.0% | |
! | AAGCCTTATCCCACTAAGTG+AGG | - | chr1_1:9086973-9086992 | None:intergenic | 45.0% |
TCACTTAGTGGGATAAGGCT+TGG | + | chr1_1:9086972-9086991 | Msa0006210:intron | 45.0% | |
ACACGTAGTTGTAGGCAGAA+AGG | + | chr1_1:9087115-9087134 | Msa0006210:intron | 45.0% | |
AAGAGTTGGACGACATCATC+AGG | + | chr1_1:9087242-9087261 | Msa0006210:CDS | 45.0% | |
TTGGACGACATCATCAGGTA+TGG | + | chr1_1:9087247-9087266 | Msa0006210:CDS | 45.0% | |
CATCATCAGGTATGGCTCAA+AGG | + | chr1_1:9087255-9087274 | Msa0006210:CDS | 45.0% | |
CGGCATCGTCGTAATGAATT+TGG | - | chr1_1:9087321-9087340 | None:intergenic | 45.0% | |
ATACCTATTCACCAACCTCG+GGG | - | chr1_1:9087701-9087720 | None:intergenic | 45.0% | |
TAGTCCCACATCGGATAGAT+AGG | + | chr1_1:9087766-9087785 | Msa0006210:intron | 45.0% | |
!! | CGGTTTTGTAGGGATGAGTT+AGG | + | chr1_1:9087837-9087856 | Msa0006210:intron | 45.0% |
GATAAAGTCGAGGCTTCAGA+AGG | + | chr1_1:9088336-9088355 | Msa0006210:CDS | 45.0% | |
GTGCAAAATGCCTTGGGTAA+AGG | + | chr1_1:9088414-9088433 | Msa0006210:CDS | 45.0% | |
AACCGCACAACTTTACTGGT+AGG | + | chr1_1:9088444-9088463 | Msa0006210:intron | 45.0% | |
!! | TGGTTCACTGACTTTCCAGA+TGG | + | chr1_1:9088600-9088619 | Msa0006210:intron | 45.0% |
CCCCCTTAAAAGAAACCATC+TGG | - | chr1_1:9088618-9088637 | None:intergenic | 45.0% | |
! | TTTGCTCGTCTAGAAGGTGT+AGG | + | chr1_1:9088643-9088662 | Msa0006210:CDS | 45.0% |
! | GTCAATAACAGGTTTGGGGT+TGG | + | chr1_1:9089073-9089092 | Msa0006210:intron | 45.0% |
!! | TTGGGGTTGGCGATTTTGAT+TGG | + | chr1_1:9089086-9089105 | Msa0006210:CDS | 45.0% |
!!! | GGTTGGCGATTTTGATTGGA+AGG | + | chr1_1:9089090-9089109 | Msa0006210:CDS | 45.0% |
CGTAAGTCTTCTGCTTCATG+TGG | - | chr1_1:9089126-9089145 | None:intergenic | 45.0% | |
ACAGACACGTTTCAACAGGA+GGG | - | chr1_1:9089425-9089444 | None:intergenic | 45.0% | |
TACAGACACGTTTCAACAGG+AGG | - | chr1_1:9089426-9089445 | None:intergenic | 45.0% | |
TCTTTCTTCCCTCTCACACT+TGG | + | chr1_1:9089594-9089613 | Msa0006210:intron | 45.0% | |
CAGTCAAACCAAGTGTGAGA+GGG | - | chr1_1:9089605-9089624 | None:intergenic | 45.0% | |
ACAGTCAAACCAAGTGTGAG+AGG | - | chr1_1:9089606-9089625 | None:intergenic | 45.0% | |
TGGCATGCACAACAGTGAAA+GGG | - | chr1_1:9089818-9089837 | None:intergenic | 45.0% | |
ATGGCATGCACAACAGTGAA+AGG | - | chr1_1:9089819-9089838 | None:intergenic | 45.0% | |
GCATGCCATCTTTGTTCAAG+TGG | + | chr1_1:9089830-9089849 | Msa0006210:intron | 45.0% | |
TCAAGTTCTTATGGGAGGAG+TGG | - | chr1_1:9090007-9090026 | None:intergenic | 45.0% | |
! | TCTGAAAAAAGTGGAGTGCC+AGG | - | chr1_1:9090222-9090241 | None:intergenic | 45.0% |
TTACCATCGCTAGGACAAGT+TGG | + | chr1_1:9090637-9090656 | Msa0006210:CDS | 45.0% | |
AATCCCCTTTGAACCAGTCT+AGG | + | chr1_1:9090698-9090717 | Msa0006210:CDS | 45.0% | |
ATCCCCTTTGAACCAGTCTA+GGG | + | chr1_1:9090699-9090718 | Msa0006210:CDS | 45.0% | |
! | TCTCCCTAGACTGGTTCAAA+GGG | - | chr1_1:9090705-9090724 | None:intergenic | 45.0% |
! | TTCTCCCTAGACTGGTTCAA+AGG | - | chr1_1:9090706-9090725 | None:intergenic | 45.0% |
! | ACAGTTGATGCAACGCTTCT+TGG | - | chr1_1:9090783-9090802 | None:intergenic | 45.0% |
CTGACATGAACTTTGTCTGC+AGG | + | chr1_1:9091206-9091225 | Msa0006210:intron | 45.0% | |
GCAGGACAAGATGAAAGCAA+TGG | + | chr1_1:9091224-9091243 | Msa0006210:intron | 45.0% | |
GACAAGATGAAAGCAATGGC+AGG | + | chr1_1:9091228-9091247 | Msa0006210:CDS | 45.0% | |
!! | GAGGCAGTTGATAACTCGTT+TGG | - | chr1_1:9091290-9091309 | None:intergenic | 45.0% |
TTTGGGTACGCAGATAGCAA+AGG | - | chr1_1:9091429-9091448 | None:intergenic | 45.0% | |
TTGACAGATGTGCAATGCTG+TGG | + | chr1_1:9091685-9091704 | Msa0006210:intron | 45.0% | |
TGCTGTGGCGAAAAATACTG+AGG | + | chr1_1:9091700-9091719 | Msa0006210:CDS | 45.0% | |
!!! | TGAAATTTTTTATTTATTTA+AGG | + | chr1_1:9086433-9086452 | Msa0006210:intron | 5.0% |
AGTGGAGCAACCACCAAATG+TGG | - | chr1_1:9083024-9083043 | None:intergenic | 50.0% | |
! | ACTGGCTCCTACCACTAGAA+TGG | - | chr1_1:9083407-9083426 | None:intergenic | 50.0% |
CTTATGCACTTCCTTGACGC+TGG | + | chr1_1:9084316-9084335 | Msa0006210:CDS | 50.0% | |
CTGTACTCCTCACATGATCG+AGG | + | chr1_1:9084660-9084679 | Msa0006210:intron | 50.0% | |
TACCCCTGCAGGATTGAAGA+AGG | + | chr1_1:9084909-9084928 | Msa0006210:intron | 50.0% | |
GGAGCTCGACAAGTTTGTGA+TGG | + | chr1_1:9085614-9085633 | Msa0006210:intron | 50.0% | |
GCTCGACAAGTTTGTGATGG+AGG | + | chr1_1:9085617-9085636 | Msa0006210:intron | 50.0% | |
! | CAAACGCTATAGCGGGATAG+TGG | - | chr1_1:9085855-9085874 | None:intergenic | 50.0% |
CTATCCCGCTATAGCGTTTG+TGG | + | chr1_1:9085855-9085874 | Msa0006210:intron | 50.0% | |
ATCCCGCTATAGCGTTTGTG+GGG | + | chr1_1:9085857-9085876 | Msa0006210:intron | 50.0% | |
! | GTCCACTACGCAGTGCTATT+CGG | + | chr1_1:9085881-9085900 | Msa0006210:intron | 50.0% |
! | TCCACTACGCAGTGCTATTC+GGG | + | chr1_1:9085882-9085901 | Msa0006210:intron | 50.0% |
GCAACTTCCCTGATGATTCC+AGG | - | chr1_1:9086016-9086035 | None:intergenic | 50.0% | |
TCAACGGTGCAGAAACCGAA+AGG | - | chr1_1:9086179-9086198 | None:intergenic | 50.0% | |
!! | CTACTAGAGCTGGTGGATTG+GGG | + | chr1_1:9086353-9086372 | Msa0006210:CDS | 50.0% |
TAACTGTGTCTGCCGTTGCA+AGG | - | chr1_1:9086384-9086403 | None:intergenic | 50.0% | |
TTGTCCAACTCGATGAGCTC+TGG | - | chr1_1:9086830-9086849 | None:intergenic | 50.0% | |
GCTGATGAGAATGATGTGGC+CGG | + | chr1_1:9087286-9087305 | Msa0006210:CDS | 50.0% | |
TTGTTGGATCGCGAGCAAGT+TGG | + | chr1_1:9087435-9087454 | Msa0006210:CDS | 50.0% | |
! | CGAGCAAGTTGGAGATGAAG+AGG | + | chr1_1:9087446-9087465 | Msa0006210:CDS | 50.0% |
! | ACAGATTTTCCATACCCCCG+AGG | + | chr1_1:9087683-9087702 | Msa0006210:intron | 50.0% |
! | ATTTTCCATACCCCCGAGGT+TGG | + | chr1_1:9087687-9087706 | Msa0006210:intron | 50.0% |
TACCTATTCACCAACCTCGG+GGG | - | chr1_1:9087700-9087719 | None:intergenic | 50.0% | |
GTTGGCCGCTAACACAATCT+GGG | - | chr1_1:9087732-9087751 | None:intergenic | 50.0% | |
AGTTGGCCGCTAACACAATC+TGG | - | chr1_1:9087733-9087752 | None:intergenic | 50.0% | |
TTGTGTTAGCGGCCAACTCT+CGG | + | chr1_1:9087735-9087754 | Msa0006210:intron | 50.0% | |
ACTAAATCCCACCCGAGAGT+TGG | - | chr1_1:9087750-9087769 | None:intergenic | 50.0% | |
GGTGGGATTTAGTCCCACAT+CGG | + | chr1_1:9087757-9087776 | Msa0006210:intron | 50.0% | |
!! | ACCGTACAAGCCGGTTTTGT+AGG | + | chr1_1:9087826-9087845 | Msa0006210:intron | 50.0% |
!! | CCCTACAAAACCGGCTTGTA+CGG | - | chr1_1:9087830-9087849 | None:intergenic | 50.0% |
!! | CCGTACAAGCCGGTTTTGTA+GGG | + | chr1_1:9087827-9087846 | Msa0006210:intron | 50.0% |
GTTTCGCTTCCCTTTACCCA+AGG | - | chr1_1:9088427-9088446 | None:intergenic | 50.0% | |
GCGAAACCGCACAACTTTAC+TGG | + | chr1_1:9088440-9088459 | Msa0006210:CDS | 50.0% | |
GGCCTACCAGTAAAGTTGTG+CGG | - | chr1_1:9088449-9088468 | None:intergenic | 50.0% | |
! | CTAGAAGGTGTAGGCTCTGA+TGG | + | chr1_1:9088652-9088671 | Msa0006210:CDS | 50.0% |
CACAAATCCACCGCCGTTAA+TGG | + | chr1_1:9088867-9088886 | Msa0006210:CDS | 50.0% | |
AATCCACCGCCGTTAATGGA+AGG | + | chr1_1:9088871-9088890 | Msa0006210:CDS | 50.0% | |
CCTTCACCTTCCATTAACGG+CGG | - | chr1_1:9088880-9088899 | None:intergenic | 50.0% | |
ACGCACGGTTATCCTTTAGG+AGG | - | chr1_1:9089872-9089891 | None:intergenic | 50.0% | |
GACATCTTGTCACGGTATGC+AGG | + | chr1_1:9090243-9090262 | Msa0006210:CDS | 50.0% | |
! | CTCCCTAGACTGGTTCAAAG+GGG | - | chr1_1:9090704-9090723 | None:intergenic | 50.0% |
GGTAGTGCTGCAGCAGTTAA+TGG | + | chr1_1:9090730-9090749 | Msa0006210:CDS | 50.0% | |
GCAGCAGTTAATGGAGCACA+TGG | + | chr1_1:9090739-9090758 | Msa0006210:CDS | 50.0% | |
!! | TGAGGCAGTGTTGACCGATT+AGG | - | chr1_1:9091527-9091546 | None:intergenic | 50.0% |
!! | GGCTCTTGAGCGGATTGATT+TGG | - | chr1_1:9091803-9091822 | None:intergenic | 50.0% |
!! | ACTTGTTGTCGGCTCTTGAG+CGG | - | chr1_1:9091813-9091832 | None:intergenic | 50.0% |
! | GCCCATAAAGTGGGAGTGCA+TGG | + | chr1_1:9083367-9083386 | Msa0006210:CDS | 55.0% |
GACTAACCTTCCCAGCGTCA+AGG | - | chr1_1:9084330-9084349 | None:intergenic | 55.0% | |
!! | GCACTCATGGGGCATTGTAG+CGG | - | chr1_1:9085508-9085527 | None:intergenic | 55.0% |
!! | GCTATAGCGGGATAGTGGGA+TGG | - | chr1_1:9085850-9085869 | None:intergenic | 55.0% |
ACGCCCCACAAACGCTATAG+CGG | - | chr1_1:9085863-9085882 | None:intergenic | 55.0% | |
TCCCGAATAGCACTGCGTAG+TGG | - | chr1_1:9085886-9085905 | None:intergenic | 55.0% | |
! | CGTGAGTTCCCACTGGTTAG+TGG | - | chr1_1:9086645-9086664 | None:intergenic | 55.0% |
ATGGCCAGAGCTCATCGAGT+TGG | + | chr1_1:9086823-9086842 | Msa0006210:CDS | 55.0% | |
ACGACGATGCCGCTATTGAC+AGG | + | chr1_1:9087329-9087348 | Msa0006210:CDS | 55.0% | |
ATTCACCAACCTCGGGGGTA+TGG | - | chr1_1:9087695-9087714 | None:intergenic | 55.0% | |
!! | TACCCCCGAGGTTGGTGAAT+AGG | + | chr1_1:9087695-9087714 | Msa0006210:intron | 55.0% |
TGTGTTAGCGGCCAACTCTC+GGG | + | chr1_1:9087736-9087755 | Msa0006210:intron | 55.0% | |
!! | CAAAACCGGCTTGTACGGTG+AGG | - | chr1_1:9087825-9087844 | None:intergenic | 55.0% |
TCACCTTCCATTAACGGCGG+TGG | - | chr1_1:9088877-9088896 | None:intergenic | 55.0% | |
CCGCCGTTAATGGAAGGTGA+AGG | + | chr1_1:9088877-9088896 | Msa0006210:CDS | 55.0% | |
GAGCCAACTTGTCCTAGCGA+TGG | - | chr1_1:9090643-9090662 | None:intergenic | 55.0% | |
GTATCGTCTCTCTTCAGCGG+CGG | + | chr1_1:9091574-9091593 | Msa0006210:intron | 55.0% | |
GCACTTCCTTGACGCTGGGA+AGG | + | chr1_1:9084321-9084340 | Msa0006210:CDS | 60.0% | |
CGCCCCACAAACGCTATAGC+GGG | - | chr1_1:9085862-9085881 | None:intergenic | 60.0% | |
TTAGCGGCCAACTCTCGGGT+GGG | + | chr1_1:9087740-9087759 | Msa0006210:intron | 60.0% | |
!! | AACCGGCTTGTACGGTGAGG+AGG | - | chr1_1:9087822-9087841 | None:intergenic | 60.0% |
! | AGGTGTAGGCTCTGATGGCG+AGG | + | chr1_1:9088657-9088676 | Msa0006210:CDS | 60.0% |
GTTAGCGGCCAACTCTCGGG+TGG | + | chr1_1:9087739-9087758 | Msa0006210:intron | 65.0% | |
GGCCTCCTCACCGTACAAGC+CGG | + | chr1_1:9087817-9087836 | Msa0006210:intron | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1_1 | gene | 9082721 | 9091865 | 9082721 | ID=Msa0006210;Name=Msa0006210 |
chr1_1 | mRNA | 9082721 | 9091865 | 9082721 | ID=Msa0006210-mRNA-1;Parent=Msa0006210;Name=Msa0006210-mRNA-1;_AED=0.16;_eAED=0.16;_QI=0|0|0|1|0.83|0.84|25|0|993 |
chr1_1 | exon | 9082721 | 9082850 | 9082721 | ID=Msa0006210-mRNA-1:exon:3208;Parent=Msa0006210-mRNA-1 |
chr1_1 | exon | 9082965 | 9083101 | 9082965 | ID=Msa0006210-mRNA-1:exon:3209;Parent=Msa0006210-mRNA-1 |
chr1_1 | exon | 9083176 | 9083388 | 9083176 | ID=Msa0006210-mRNA-1:exon:3210;Parent=Msa0006210-mRNA-1 |
chr1_1 | exon | 9083538 | 9083645 | 9083538 | ID=Msa0006210-mRNA-1:exon:3211;Parent=Msa0006210-mRNA-1 |
chr1_1 | exon | 9084292 | 9084342 | 9084292 | ID=Msa0006210-mRNA-1:exon:3212;Parent=Msa0006210-mRNA-1 |
chr1_1 | exon | 9084445 | 9084544 | 9084445 | ID=Msa0006210-mRNA-1:exon:3213;Parent=Msa0006210-mRNA-1 |
chr1_1 | exon | 9084920 | 9085062 | 9084920 | ID=Msa0006210-mRNA-1:exon:3214;Parent=Msa0006210-mRNA-1 |
chr1_1 | exon | 9085188 | 9085291 | 9085188 | ID=Msa0006210-mRNA-1:exon:3215;Parent=Msa0006210-mRNA-1 |
chr1_1 | exon | 9086007 | 9086145 | 9086007 | ID=Msa0006210-mRNA-1:exon:3216;Parent=Msa0006210-mRNA-1 |
chr1_1 | exon | 9086247 | 9086416 | 9086247 | ID=Msa0006210-mRNA-1:exon:3217;Parent=Msa0006210-mRNA-1 |
chr1_1 | exon | 9086792 | 9086858 | 9086792 | ID=Msa0006210-mRNA-1:exon:3218;Parent=Msa0006210-mRNA-1 |
chr1_1 | exon | 9087241 | 9087350 | 9087241 | ID=Msa0006210-mRNA-1:exon:3219;Parent=Msa0006210-mRNA-1 |
chr1_1 | exon | 9087434 | 9087515 | 9087434 | ID=Msa0006210-mRNA-1:exon:3220;Parent=Msa0006210-mRNA-1 |
chr1_1 | exon | 9088315 | 9088461 | 9088315 | ID=Msa0006210-mRNA-1:exon:3221;Parent=Msa0006210-mRNA-1 |
chr1_1 | exon | 9088619 | 9088766 | 9088619 | ID=Msa0006210-mRNA-1:exon:3222;Parent=Msa0006210-mRNA-1 |
chr1_1 | exon | 9088863 | 9088965 | 9088863 | ID=Msa0006210-mRNA-1:exon:3223;Parent=Msa0006210-mRNA-1 |
chr1_1 | exon | 9089084 | 9089158 | 9089084 | ID=Msa0006210-mRNA-1:exon:3224;Parent=Msa0006210-mRNA-1 |
chr1_1 | exon | 9089288 | 9089349 | 9089288 | ID=Msa0006210-mRNA-1:exon:3225;Parent=Msa0006210-mRNA-1 |
chr1_1 | exon | 9089447 | 9089523 | 9089447 | ID=Msa0006210-mRNA-1:exon:3226;Parent=Msa0006210-mRNA-1 |
chr1_1 | exon | 9090198 | 9090328 | 9090198 | ID=Msa0006210-mRNA-1:exon:3227;Parent=Msa0006210-mRNA-1 |
chr1_1 | exon | 9090543 | 9090788 | 9090543 | ID=Msa0006210-mRNA-1:exon:3228;Parent=Msa0006210-mRNA-1 |
chr1_1 | exon | 9090825 | 9090918 | 9090825 | ID=Msa0006210-mRNA-1:exon:3229;Parent=Msa0006210-mRNA-1 |
chr1_1 | exon | 9091228 | 9091324 | 9091228 | ID=Msa0006210-mRNA-1:exon:3230;Parent=Msa0006210-mRNA-1 |
chr1_1 | exon | 9091486 | 9091559 | 9091486 | ID=Msa0006210-mRNA-1:exon:3231;Parent=Msa0006210-mRNA-1 |
chr1_1 | exon | 9091692 | 9091865 | 9091692 | ID=Msa0006210-mRNA-1:exon:3232;Parent=Msa0006210-mRNA-1 |
chr1_1 | CDS | 9082721 | 9082850 | 9082721 | ID=Msa0006210-mRNA-1:cds;Parent=Msa0006210-mRNA-1 |
chr1_1 | CDS | 9082965 | 9083101 | 9082965 | ID=Msa0006210-mRNA-1:cds;Parent=Msa0006210-mRNA-1 |
chr1_1 | CDS | 9083176 | 9083388 | 9083176 | ID=Msa0006210-mRNA-1:cds;Parent=Msa0006210-mRNA-1 |
chr1_1 | CDS | 9083538 | 9083645 | 9083538 | ID=Msa0006210-mRNA-1:cds;Parent=Msa0006210-mRNA-1 |
chr1_1 | CDS | 9084292 | 9084342 | 9084292 | ID=Msa0006210-mRNA-1:cds;Parent=Msa0006210-mRNA-1 |
chr1_1 | CDS | 9084445 | 9084544 | 9084445 | ID=Msa0006210-mRNA-1:cds;Parent=Msa0006210-mRNA-1 |
chr1_1 | CDS | 9084920 | 9085062 | 9084920 | ID=Msa0006210-mRNA-1:cds;Parent=Msa0006210-mRNA-1 |
chr1_1 | CDS | 9085188 | 9085291 | 9085188 | ID=Msa0006210-mRNA-1:cds;Parent=Msa0006210-mRNA-1 |
chr1_1 | CDS | 9086007 | 9086145 | 9086007 | ID=Msa0006210-mRNA-1:cds;Parent=Msa0006210-mRNA-1 |
chr1_1 | CDS | 9086247 | 9086416 | 9086247 | ID=Msa0006210-mRNA-1:cds;Parent=Msa0006210-mRNA-1 |
chr1_1 | CDS | 9086792 | 9086858 | 9086792 | ID=Msa0006210-mRNA-1:cds;Parent=Msa0006210-mRNA-1 |
chr1_1 | CDS | 9087241 | 9087350 | 9087241 | ID=Msa0006210-mRNA-1:cds;Parent=Msa0006210-mRNA-1 |
chr1_1 | CDS | 9087434 | 9087515 | 9087434 | ID=Msa0006210-mRNA-1:cds;Parent=Msa0006210-mRNA-1 |
chr1_1 | CDS | 9088315 | 9088461 | 9088315 | ID=Msa0006210-mRNA-1:cds;Parent=Msa0006210-mRNA-1 |
chr1_1 | CDS | 9088619 | 9088766 | 9088619 | ID=Msa0006210-mRNA-1:cds;Parent=Msa0006210-mRNA-1 |
chr1_1 | CDS | 9088863 | 9088965 | 9088863 | ID=Msa0006210-mRNA-1:cds;Parent=Msa0006210-mRNA-1 |
chr1_1 | CDS | 9089084 | 9089158 | 9089084 | ID=Msa0006210-mRNA-1:cds;Parent=Msa0006210-mRNA-1 |
chr1_1 | CDS | 9089288 | 9089349 | 9089288 | ID=Msa0006210-mRNA-1:cds;Parent=Msa0006210-mRNA-1 |
chr1_1 | CDS | 9089447 | 9089523 | 9089447 | ID=Msa0006210-mRNA-1:cds;Parent=Msa0006210-mRNA-1 |
chr1_1 | CDS | 9090198 | 9090328 | 9090198 | ID=Msa0006210-mRNA-1:cds;Parent=Msa0006210-mRNA-1 |
chr1_1 | CDS | 9090543 | 9090788 | 9090543 | ID=Msa0006210-mRNA-1:cds;Parent=Msa0006210-mRNA-1 |
chr1_1 | CDS | 9090825 | 9090918 | 9090825 | ID=Msa0006210-mRNA-1:cds;Parent=Msa0006210-mRNA-1 |
chr1_1 | CDS | 9091228 | 9091324 | 9091228 | ID=Msa0006210-mRNA-1:cds;Parent=Msa0006210-mRNA-1 |
chr1_1 | CDS | 9091486 | 9091559 | 9091486 | ID=Msa0006210-mRNA-1:cds;Parent=Msa0006210-mRNA-1 |
chr1_1 | CDS | 9091692 | 9091865 | 9091692 | ID=Msa0006210-mRNA-1:cds;Parent=Msa0006210-mRNA-1 |
Gene Sequence |
Protein sequence |