Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0008540 | sp|B7U179|ABAP1_ARATH | 32.943 | 683 | 399 | 17 | 9 | 650 | 61 | 725 | 4.46e-85 | 285 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|---|---|
| Msa0008540 | TR | TRAF |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0008540 | MtrunA17_Chr1g0205751 | 35.832 | 667 | 389 | 15 | 14 | 650 | 39 | 696 | 2.00e-96 | 311 |
| Msa0008540 | MtrunA17_Chr5g0394261 | 37.559 | 631 | 356 | 14 | 53 | 654 | 76 | 697 | 3.59e-96 | 311 |
| Msa0008540 | MtrunA17_Chr7g0259851 | 35.726 | 585 | 347 | 14 | 97 | 662 | 123 | 697 | 1.64e-79 | 266 |
| Msa0008540 | MtrunA17_Chr1g0149211 | 27.158 | 475 | 285 | 21 | 68 | 494 | 68 | 529 | 1.34e-15 | 80.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0008540 | AT5G13060.1 | 32.943 | 683 | 399 | 17 | 9 | 650 | 61 | 725 | 4.53e-86 | 285 |
| Msa0008540 | AT5G19330.1 | 35.140 | 609 | 357 | 14 | 63 | 642 | 91 | 690 | 2.15e-84 | 280 |
| Msa0008540 | AT5G19330.2 | 30.528 | 606 | 330 | 13 | 63 | 643 | 92 | 631 | 6.99e-51 | 187 |
Find 132 sgRNAs with CRISPR-Local
Find 538 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTCGTTGCTCTAACATTAA+AGG | 0.177108 | 1_1:-12270838 | Msa0008540:CDS |
| AATAAGTGAGAATAAAATTT+TGG | 0.231260 | 1_1:+12270455 | None:intergenic |
| CAAGTTGGCCAGTAAATTCT+TGG | 0.274559 | 1_1:-12273229 | Msa0008540:CDS |
| TTGCTAATGGTGTTGGAAAT+GGG | 0.295199 | 1_1:+12278449 | None:intergenic |
| ATCGACTTCTGAACTTAAAT+AGG | 0.307874 | 1_1:+12273448 | None:intergenic |
| GTTGCTAATGGTGTTGGAAA+TGG | 0.308351 | 1_1:+12278448 | None:intergenic |
| AACACGAATTGCTTTGGCTT+TGG | 0.334035 | 1_1:-12273471 | Msa0008540:CDS |
| GTTAATCATTTGGTTGCTAA+TGG | 0.337405 | 1_1:+12278436 | None:intergenic |
| ATAAGAATACTGAGCTTTCC+TGG | 0.338428 | 1_1:+12274683 | None:intergenic |
| TCATCGTCTTGCAGATAATA+AGG | 0.339116 | 1_1:-12274001 | Msa0008540:intron |
| TACTTAGCGTGGAAACTATA+TGG | 0.342160 | 1_1:-12270884 | Msa0008540:CDS |
| GACGTTATATTTCTTATTGA+AGG | 0.346191 | 1_1:-12272832 | Msa0008540:intron |
| TTCGTTGCTCTAACATTAAA+GGG | 0.350794 | 1_1:-12270837 | Msa0008540:CDS |
| CAACTATGCTAGATAGTATA+AGG | 0.352751 | 1_1:-12277030 | Msa0008540:intron |
| TAACCACAAACTTGTATGTA+TGG | 0.353551 | 1_1:-12270499 | Msa0008540:three_prime_UTR |
| ATCCTCCTTGGAGGAGTCTC+TGG | 0.355174 | 1_1:+12273826 | None:intergenic |
| TCATTAGCGGAAAAGATTAA+TGG | 0.357540 | 1_1:-12273630 | Msa0008540:CDS |
| ATTAGAACCACTTCAGTTAT+CGG | 0.364657 | 1_1:+12278108 | None:intergenic |
| CTAAACTGCCACTGCGTAAG+AGG | 0.378205 | 1_1:+12270552 | None:intergenic |
| GTAAGTGCCTTTGTCAATAA+AGG | 0.380566 | 1_1:+12274724 | None:intergenic |
| ATAAAGGTATAAGACCTCTT+TGG | 0.387340 | 1_1:+12274740 | None:intergenic |
| TATTACCGTAGTTAATCATT+TGG | 0.388806 | 1_1:+12278426 | None:intergenic |
| AGCTTCCGATCCCTCCTTAG+AGG | 0.391644 | 1_1:+12273266 | None:intergenic |
| ATCGAAACAAATCAAATGCT+TGG | 0.395849 | 1_1:+12273664 | None:intergenic |
| CTCCTCCAAGGAGGATATCT+TGG | 0.404179 | 1_1:-12273819 | Msa0008540:CDS |
| GCTACTTGGCTCATCCTCTA+AGG | 0.406347 | 1_1:-12273280 | Msa0008540:CDS |
| TTAGAACCACTTCAGTTATC+GGG | 0.408364 | 1_1:+12278109 | None:intergenic |
| TTCTATATCTATCAGATTGT+AGG | 0.413639 | 1_1:-12275557 | Msa0008540:intron |
| TGCTAATGGTGTTGGAAATG+GGG | 0.422743 | 1_1:+12278450 | None:intergenic |
| CTCCTCATCATACTCTGTTA+TGG | 0.426496 | 1_1:+12278340 | None:intergenic |
| TACAATTTCATTATACAAGC+CGG | 0.434383 | 1_1:+12270412 | None:intergenic |
| TACCTCATTAATTCTGTAAG+TGG | 0.440870 | 1_1:+12275052 | None:intergenic |
| AGATGGGGCCAAGAATTTAC+TGG | 0.441095 | 1_1:+12273221 | None:intergenic |
| ATTCGTGTTTGAAAATCATT+CGG | 0.442477 | 1_1:+12273485 | None:intergenic |
| CTACTTTGAGAGCCAACGTT+TGG | 0.442715 | 1_1:-12274941 | Msa0008540:CDS |
| AGCCCATACATACAAGTTTG+TGG | 0.442927 | 1_1:+12270496 | None:intergenic |
| TTGAAGAGGATGGTGGACTT+AGG | 0.449737 | 1_1:-12278165 | Msa0008540:CDS |
| CAGGACTCGGATTGTCAAGT+TGG | 0.452315 | 1_1:-12274108 | Msa0008540:CDS |
| TAAATTCTTGGCCCCATCTC+CGG | 0.457915 | 1_1:-12273217 | Msa0008540:CDS |
| AATATTGTACCTTCCATTGT+GGG | 0.461806 | 1_1:+12274884 | None:intergenic |
| GTTAAGATCTACTGTGGGTC+TGG | 0.463107 | 1_1:+12270518 | None:intergenic |
| GATGCACAATATCATCTAGT+AGG | 0.464401 | 1_1:+12276896 | None:intergenic |
| TACTTCTTTATCAATACATC+CGG | 0.470787 | 1_1:-12273193 | Msa0008540:intron |
| TCGAAACAAATCAAATGCTT+GGG | 0.476037 | 1_1:+12273665 | None:intergenic |
| TGCAGATGGAATTCCATCCT+TGG | 0.479025 | 1_1:-12276923 | Msa0008540:CDS |
| ATCTATCAGATTGTAGGTCT+CGG | 0.479989 | 1_1:-12275551 | Msa0008540:intron |
| ATTGACATTTGAATCATTAG+CGG | 0.481775 | 1_1:-12273643 | Msa0008540:CDS |
| ATATTAAGAATGGCATTTCA+CGG | 0.482955 | 1_1:-12278275 | Msa0008540:intron |
| TGCAGTGCCCGCTGGTACAG+TGG | 0.483512 | 1_1:+12271314 | None:intergenic |
| GAGTTGCTTACTGAGCTACT+TGG | 0.486455 | 1_1:-12273294 | Msa0008540:CDS |
| CATTTGGTTGCTAATGGTGT+TGG | 0.486903 | 1_1:+12278442 | None:intergenic |
| ATCATGTTGTCAATAAAGTC+AGG | 0.495057 | 1_1:+12270602 | None:intergenic |
| CGAAATGCTAGATATGAATC+CGG | 0.497409 | 1_1:-12270431 | Msa0008540:three_prime_UTR |
| CAAGTTGGTATTGTGAATGA+AGG | 0.499666 | 1_1:-12274093 | Msa0008540:CDS |
| TCGAATAATAAATGCTTCAA+AGG | 0.502494 | 1_1:-12272669 | Msa0008540:CDS |
| TTGTTTAGATTTATTTACAC+TGG | 0.503233 | 1_1:-12271158 | Msa0008540:intron |
| CTTATTATGTTTCTTATCTG+AGG | 0.504191 | 1_1:-12274665 | Msa0008540:intron |
| GAGAAACTATGAAGAGTTGA+GGG | 0.505799 | 1_1:-12270793 | Msa0008540:CDS |
| CATTCGGCAAACTCCACATT+CGG | 0.507417 | 1_1:+12273501 | None:intergenic |
| GATAAAGAAGTAGCCGGAGA+TGG | 0.508149 | 1_1:+12273204 | None:intergenic |
| ATCCACTTACAGAATTAATG+AGG | 0.509465 | 1_1:-12275054 | Msa0008540:intron |
| AGTCGTGAGGATATCAATAG+AGG | 0.514618 | 1_1:+12277069 | None:intergenic |
| ATAAAGAAGTAGCCGGAGAT+GGG | 0.514779 | 1_1:+12273205 | None:intergenic |
| CATCACCAAGATATCCTCCT+TGG | 0.515233 | 1_1:+12273814 | None:intergenic |
| TTGTACCTTCCATTGTGGGT+TGG | 0.521112 | 1_1:+12274888 | None:intergenic |
| GTCTGCTAATGAAGGAGTCC+AGG | 0.521443 | 1_1:-12274701 | Msa0008540:CDS |
| GAATATTGTACCTTCCATTG+TGG | 0.525011 | 1_1:+12274883 | None:intergenic |
| AAGAGTAGCTTGCTTTGCGT+TGG | 0.526568 | 1_1:-12276872 | Msa0008540:CDS |
| CTCATCCTCTAAGGAGGGAT+CGG | 0.529278 | 1_1:-12273271 | Msa0008540:CDS |
| CTGTGAAAATAAGATTGCTC+AGG | 0.533457 | 1_1:-12271054 | Msa0008540:intron |
| TGCTGCGGCTTTATTCAAGT+TGG | 0.534737 | 1_1:-12273244 | Msa0008540:CDS |
| CACCAAGATATCCTCCTTGG+AGG | 0.535091 | 1_1:+12273817 | None:intergenic |
| CTCAACTGTTACACCGAATG+TGG | 0.535467 | 1_1:-12273514 | Msa0008540:CDS |
| TATAGCATTAGAATTATAAG+TGG | 0.536156 | 1_1:+12275521 | None:intergenic |
| TCTAGTAGGTGAACCAAGGA+TGG | 0.539296 | 1_1:+12276910 | None:intergenic |
| ACAAGATGTCTAGCTAAGGC+TGG | 0.541047 | 1_1:+12278135 | None:intergenic |
| CAAACGTTGGCTCTCAAAGT+AGG | 0.542198 | 1_1:+12274942 | None:intergenic |
| AACTTGTATGTATGGGCTCA+AGG | 0.545978 | 1_1:-12270491 | Msa0008540:three_prime_UTR |
| TAGATCATGCTTATCCAAAG+AGG | 0.547059 | 1_1:-12274754 | Msa0008540:CDS |
| TAATGCTATATCGTGAAGAC+AGG | 0.548205 | 1_1:-12275508 | Msa0008540:CDS |
| ACTATGAAGAGTTGAGGGAA+AGG | 0.551507 | 1_1:-12270788 | Msa0008540:intron |
| GAGTGCTATGGTTACTAAGT+CGG | 0.552815 | 1_1:-12272642 | Msa0008540:CDS |
| TGAGAAACTATGAAGAGTTG+AGG | 0.557066 | 1_1:-12270794 | Msa0008540:CDS |
| TATTGTGAATGAAGGCTTGG+TGG | 0.558315 | 1_1:-12274085 | Msa0008540:CDS |
| AAATTATATTCTCTGCAAGT+AGG | 0.560105 | 1_1:-12274039 | Msa0008540:CDS |
| AACCACAAACTTGTATGTAT+GGG | 0.560261 | 1_1:-12270498 | Msa0008540:three_prime_UTR |
| TCTTATACCTTTATTGACAA+AGG | 0.563122 | 1_1:-12274731 | Msa0008540:CDS |
| ACGGAGCTTGTGAGATAGTG+AGG | 0.567161 | 1_1:-12275102 | Msa0008540:CDS |
| GCACTTACGTCTGCTAATGA+AGG | 0.575276 | 1_1:-12274709 | Msa0008540:CDS |
| TTCTTAATATAAAATTAGCA+CGG | 0.580057 | 1_1:+12278288 | None:intergenic |
| AATCAAATCAAGCAAATCGA+TGG | 0.582383 | 1_1:+12274918 | None:intergenic |
| TGTATTGATAAAGAAGTAGC+CGG | 0.582481 | 1_1:+12273198 | None:intergenic |
| AGCAACCAAATGATTAACTA+CGG | 0.585894 | 1_1:-12278431 | Msa0008540:exon |
| CGCACAGAATGTACTTAGCG+TGG | 0.586567 | 1_1:-12270895 | Msa0008540:intron |
| GTGTACAAGTTTATCATGCT+AGG | 0.592047 | 1_1:-12273855 | Msa0008540:CDS |
| GGTGGAATTACTGAAGGTGT+TGG | 0.593973 | 1_1:-12274067 | Msa0008540:CDS |
| CAGATGATCTATAATCTAGA+CGG | 0.595673 | 1_1:-12275121 | Msa0008540:CDS |
| GGAGTACAGTTCAAAGATTG+AGG | 0.596794 | 1_1:-12278321 | Msa0008540:CDS |
| ACTACGTGTGCAGTGCCCGC+TGG | 0.598387 | 1_1:+12271306 | None:intergenic |
| TGTGTCCCCGATAACTGAAG+TGG | 0.599893 | 1_1:-12278115 | Msa0008540:CDS |
| AAAGACCAACCCACAATGGA+AGG | 0.601200 | 1_1:-12274893 | Msa0008540:intron |
| TTTGTGGTTAAGATCTACTG+TGG | 0.601353 | 1_1:+12270512 | None:intergenic |
| TTCAAAGGTGTTGAGTGCTA+TGG | 0.603447 | 1_1:-12272654 | Msa0008540:CDS |
| TGGTATTGTGAATGAAGGCT+TGG | 0.604614 | 1_1:-12274088 | Msa0008540:CDS |
| ACTTGGCTCATCCTCTAAGG+AGG | 0.604968 | 1_1:-12273277 | Msa0008540:CDS |
| TGTATGGGCTCAAGGTGTTG+TGG | 0.614888 | 1_1:-12270483 | Msa0008540:three_prime_UTR |
| GGAGTCCAGAGACTCCTCCA+AGG | 0.616675 | 1_1:-12273831 | Msa0008540:CDS |
| GGACACAAGATGTCTAGCTA+AGG | 0.619572 | 1_1:+12278131 | None:intergenic |
| ACCTAAAATACACCATCAGA+TGG | 0.619756 | 1_1:-12270579 | Msa0008540:CDS |
| GGAGGGATCGGAAGCTGCTG+CGG | 0.621384 | 1_1:-12273259 | Msa0008540:CDS |
| TAGAACCACTTCAGTTATCG+GGG | 0.625659 | 1_1:+12278110 | None:intergenic |
| CTTGGCTCATCCTCTAAGGA+GGG | 0.627160 | 1_1:-12273276 | Msa0008540:CDS |
| TTGTGGTTAAGATCTACTGT+GGG | 0.628036 | 1_1:+12270513 | None:intergenic |
| TTGTAAAGACCAACCCACAA+TGG | 0.630882 | 1_1:-12274897 | Msa0008540:CDS |
| ACGTTGGCTCTCAAAGTAGG+TGG | 0.633070 | 1_1:+12274945 | None:intergenic |
| GCAAATCGATGGCCAAACGT+TGG | 0.640110 | 1_1:+12274929 | None:intergenic |
| GTAGATACCACTGTACCAGC+GGG | 0.647731 | 1_1:-12271321 | Msa0008540:CDS |
| ATCATCTAGTAGGTGAACCA+AGG | 0.648799 | 1_1:+12276906 | None:intergenic |
| TAAAGAAGTAGCCGGAGATG+GGG | 0.655484 | 1_1:+12273206 | None:intergenic |
| TACAAGTTTATCATGCTAGG+TGG | 0.658188 | 1_1:-12273852 | Msa0008540:CDS |
| GAACCATGAAAATGCTACAC+AGG | 0.659261 | 1_1:-12276836 | Msa0008540:intron |
| ATATCCTCACGACTCTTGCG+AGG | 0.664239 | 1_1:-12277060 | Msa0008540:CDS |
| GTAAGAGGTGTACCATCTGA+TGG | 0.669881 | 1_1:+12270567 | None:intergenic |
| TACCATAACAGAGTATGATG+AGG | 0.683678 | 1_1:-12278342 | Msa0008540:CDS |
| GCTTGTGAGATAGTGAGGAG+AGG | 0.683896 | 1_1:-12275097 | Msa0008540:CDS |
| TTGTCCTCGCAAGAGTCGTG+AGG | 0.687559 | 1_1:+12277056 | None:intergenic |
| GGTAGATACCACTGTACCAG+CGG | 0.696611 | 1_1:-12271322 | Msa0008540:CDS |
| AGGCTTGGTGGAATTACTGA+AGG | 0.698166 | 1_1:-12274073 | Msa0008540:CDS |
| GTCCAGAGACTCCTCCAAGG+AGG | 0.702113 | 1_1:-12273828 | Msa0008540:CDS |
| ATGGTACACCTCTTACGCAG+TGG | 0.704422 | 1_1:-12270560 | Msa0008540:CDS |
| TGGAAACACATATGTCAGTG+TGG | 0.704970 | 1_1:-12271138 | Msa0008540:CDS |
| CAGGCAACTTCACAACTCTG+TGG | 0.728431 | 1_1:-12275489 | Msa0008540:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TACTTTTCATTTTTAAATTA+CGG | - | chr1_1:12271339-12271358 | Msa0008540:intron | 10.0% |
| !!! | ATTTTTATAGTTTTACAAAT+CGG | + | chr1_1:12272151-12272170 | None:intergenic | 10.0% |
| !! | AGAGATAATTAAAAAAAAAA+AGG | + | chr1_1:12272324-12272343 | None:intergenic | 10.0% |
| !!! | ATAAATTATTTTTCAATTTC+AGG | - | chr1_1:12274765-12274784 | Msa0008540:intron | 10.0% |
| !!! | ACATTTTTTTATTAAATTCT+AGG | + | chr1_1:12275779-12275798 | None:intergenic | 10.0% |
| !! | ATGTTTGTTTATAATTATTA+TGG | - | chr1_1:12275914-12275933 | Msa0008540:intron | 10.0% |
| !! | TTTATAATTATTATGGAATA+TGG | - | chr1_1:12275921-12275940 | Msa0008540:intron | 10.0% |
| !! | TTCTTAATATAAAATTAGCA+CGG | + | chr1_1:12270607-12270626 | None:intergenic | 15.0% |
| !!! | TGCTAATTTTATATTAAGAA+TGG | - | chr1_1:12270607-12270626 | Msa0008540:CDS | 15.0% |
| !!! | TACTTTTCATTTTTAAAGTA+CGG | + | chr1_1:12271468-12271487 | None:intergenic | 15.0% |
| !! | AACAAATAAATCAAAACAAA+TGG | + | chr1_1:12271650-12271669 | None:intergenic | 15.0% |
| !! | TTGAGATGATAAATAATTAA+GGG | - | chr1_1:12273594-12273613 | Msa0008540:intron | 15.0% |
| !! | ATAAAGCACAATTTATTAAT+TGG | + | chr1_1:12273918-12273937 | None:intergenic | 15.0% |
| !!! | TATCTTTTTAAAATACTTCA+TGG | - | chr1_1:12275127-12275146 | Msa0008540:CDS | 15.0% |
| !!! | ATCTTTTTAAAATACTTCAT+GGG | - | chr1_1:12275128-12275147 | Msa0008540:intron | 15.0% |
| !!! | TAGTTATTTTTTATTCTTGT+AGG | - | chr1_1:12275349-12275368 | Msa0008540:intron | 15.0% |
| !!! | TTTTTTTTTTGTGAAAAAAG+AGG | - | chr1_1:12276439-12276458 | Msa0008540:intron | 15.0% |
| !!! | TTTTTTTTTGTGAAAAAAGA+GGG | - | chr1_1:12276440-12276459 | Msa0008540:intron | 15.0% |
| !!! | TGAAATATAAAGTTTTTGAA+AGG | - | chr1_1:12277620-12277639 | Msa0008540:intron | 15.0% |
| !!! | TGAATTTGATTTATTTTCAA+TGG | - | chr1_1:12278130-12278149 | Msa0008540:CDS | 15.0% |
| !!! | AATAAGTGAGAATAAAATTT+TGG | + | chr1_1:12278440-12278459 | None:intergenic | 15.0% |
| !! | AAACAAATGGAACAATTAAA+AGG | + | chr1_1:12271637-12271656 | None:intergenic | 20.0% |
| !! | AGTTAATTCAAATTAATAGC+AGG | + | chr1_1:12271906-12271925 | None:intergenic | 20.0% |
| !! | TCTTAAGAAATTTATCATCA+CGG | + | chr1_1:12272254-12272273 | None:intergenic | 20.0% |
| !! | AGGAAAAAAAAAGTAAAAAC+AGG | + | chr1_1:12272287-12272306 | None:intergenic | 20.0% |
| !!! | ATTTGTTCTTTTTTCTTTTG+TGG | - | chr1_1:12272344-12272363 | Msa0008540:intron | 20.0% |
| !! | TTAAAGGTTGAATATGAAAA+AGG | - | chr1_1:12272438-12272457 | Msa0008540:intron | 20.0% |
| !! | TGTGATAAAAAATTATGTGA+TGG | - | chr1_1:12272858-12272877 | Msa0008540:CDS | 20.0% |
| !! | TGTGTTAATTCTCTTAATAA+TGG | + | chr1_1:12272945-12272964 | None:intergenic | 20.0% |
| !! | TAAAAACTTATACATCAAAC+TGG | - | chr1_1:12273124-12273143 | Msa0008540:intron | 20.0% |
| !!! | TAATTTGGTTATGATTTGTT+GGG | + | chr1_1:12273175-12273194 | None:intergenic | 20.0% |
| !! | TATAGCATTAGAATTATAAG+TGG | + | chr1_1:12273374-12273393 | None:intergenic | 20.0% |
| !! | GTTGAGATGATAAATAATTA+AGG | - | chr1_1:12273593-12273612 | Msa0008540:intron | 20.0% |
| !! | ATCTAACATTTATAGTGAAA+TGG | - | chr1_1:12273739-12273758 | Msa0008540:intron | 20.0% |
| !! | GTTATGTAGAAAATAAAAGA+AGG | + | chr1_1:12274265-12274284 | None:intergenic | 20.0% |
| !!! | TTCATTAGATTTGTTATCAT+CGG | + | chr1_1:12274526-12274545 | None:intergenic | 20.0% |
| !! | AATTTAGTAAATGTCTTGAT+TGG | - | chr1_1:12274937-12274956 | Msa0008540:CDS | 20.0% |
| !! | TGTATTAACCTACATATATA+TGG | - | chr1_1:12275191-12275210 | Msa0008540:intron | 20.0% |
| !! | AATATCAACCATATATATGT+AGG | + | chr1_1:12275202-12275221 | None:intergenic | 20.0% |
| !!! | TCTTAAACAATACTTTTCAT+GGG | - | chr1_1:12275504-12275523 | Msa0008540:CDS | 20.0% |
| !! | TATAAACAAACATAGTGAAA+GGG | + | chr1_1:12275907-12275926 | None:intergenic | 20.0% |
| !! | TTATAAACAAACATAGTGAA+AGG | + | chr1_1:12275908-12275927 | None:intergenic | 20.0% |
| !!! | ACAATACTTTCTTTAAGATA+AGG | + | chr1_1:12276126-12276145 | None:intergenic | 20.0% |
| !!! | ATAGTTTTATTCTAAGTATG+AGG | + | chr1_1:12276324-12276343 | None:intergenic | 20.0% |
| !!! | TCAATACTTTCTTTAAGAAA+AGG | + | chr1_1:12276407-12276426 | None:intergenic | 20.0% |
| !!! | TTTTTTTTGTGAAAAAAGAG+GGG | - | chr1_1:12276441-12276460 | Msa0008540:intron | 20.0% |
| !!! | TATAACATAGGTTTTTGTTT+GGG | + | chr1_1:12276473-12276492 | None:intergenic | 20.0% |
| !!! | TTATAACATAGGTTTTTGTT+TGG | + | chr1_1:12276474-12276493 | None:intergenic | 20.0% |
| !! | CTAAGAGAAACAAAAAAAAA+TGG | + | chr1_1:12276671-12276690 | None:intergenic | 20.0% |
| !!! | ATGGTAACAATGTTAATTTT+TGG | + | chr1_1:12277451-12277470 | None:intergenic | 20.0% |
| !! | TTGTTTAGATTTATTTACAC+TGG | - | chr1_1:12277734-12277753 | Msa0008540:intron | 20.0% |
| !! | AAAATATACATCAGGTTATA+TGG | + | chr1_1:12277974-12277993 | None:intergenic | 20.0% |
| !!! | CTTTATTTTGTTTGTTTTCA+CGG | - | chr1_1:12278159-12278178 | Msa0008540:CDS | 20.0% |
| ! | TATTACCGTAGTTAATCATT+TGG | + | chr1_1:12270469-12270488 | None:intergenic | 25.0% |
| ! | ATATTAAGAATGGCATTTCA+CGG | - | chr1_1:12270617-12270636 | Msa0008540:intron | 25.0% |
| ! | ATCTTTACCTAAAACCTTAA+GGG | + | chr1_1:12271535-12271554 | None:intergenic | 25.0% |
| ! | AATTAATTGATGCCAAAGTT+GGG | + | chr1_1:12271604-12271623 | None:intergenic | 25.0% |
| ! | ATTCAAATTAATAGCAGGAT+TGG | + | chr1_1:12271901-12271920 | None:intergenic | 25.0% |
| !! | ATCCAATTTGAATTTTGTGT+AGG | - | chr1_1:12271944-12271963 | Msa0008540:intron | 25.0% |
| ! | ATCCTACACAAAATTCAAAT+TGG | + | chr1_1:12271949-12271968 | None:intergenic | 25.0% |
| ! | CTTAAGAAATTTATCATCAC+GGG | + | chr1_1:12272253-12272272 | None:intergenic | 25.0% |
| ! | ATTATATTGAATGCCATTGA+AGG | + | chr1_1:12272521-12272540 | None:intergenic | 25.0% |
| ! | AAGCTAAAAGGATAATTCAT+GGG | + | chr1_1:12272648-12272667 | None:intergenic | 25.0% |
| ! | TAAGCTAAAAGGATAATTCA+TGG | + | chr1_1:12272649-12272668 | None:intergenic | 25.0% |
| !!! | ATTATCCTTTTAGCTTATCA+AGG | - | chr1_1:12272652-12272671 | Msa0008540:CDS | 25.0% |
| ! | AACTTGATCTTATTACCATA+AGG | + | chr1_1:12272717-12272736 | None:intergenic | 25.0% |
| !! | ACTTAACTTTTATCATCTAC+AGG | - | chr1_1:12272979-12272998 | Msa0008540:intron | 25.0% |
| !! | TCATTAAGTTCTAACACAAA+AGG | + | chr1_1:12273013-12273032 | None:intergenic | 25.0% |
| !! | CTAATTTGGTTATGATTTGT+TGG | + | chr1_1:12273176-12273195 | None:intergenic | 25.0% |
| ! | AAGGAACTAACTAACTAATT+TGG | + | chr1_1:12273190-12273209 | None:intergenic | 25.0% |
| ! | TTCTATATCTATCAGATTGT+AGG | - | chr1_1:12273335-12273354 | Msa0008540:intron | 25.0% |
| ! | AAAATACGACACTTAAATAG+AGG | + | chr1_1:12273478-12273497 | None:intergenic | 25.0% |
| ! | TCTTATACCTTTATTGACAA+AGG | - | chr1_1:12274161-12274180 | Msa0008540:intron | 25.0% |
| ! | CTTATTATGTTTCTTATCTG+AGG | - | chr1_1:12274227-12274246 | Msa0008540:intron | 25.0% |
| ! | GTAGAAAATAAAAGAAGGAA+CGG | + | chr1_1:12274260-12274279 | None:intergenic | 25.0% |
| !!! | AAAAGTACTCAAGTTCAAAT+TGG | - | chr1_1:12274332-12274351 | Msa0008540:intron | 25.0% |
| ! | AAGCTTCTTATGTCATTAAT+GGG | + | chr1_1:12274449-12274468 | None:intergenic | 25.0% |
| ! | AAATCTAATGAAGACAACTA+TGG | - | chr1_1:12274534-12274553 | Msa0008540:intron | 25.0% |
| !!! | ATTTGGTTTGACTTTTTTAG+GGG | + | chr1_1:12274605-12274624 | None:intergenic | 25.0% |
| !!! | GATTTGGTTTGACTTTTTTA+GGG | + | chr1_1:12274606-12274625 | None:intergenic | 25.0% |
| ! | AAAGAGATGATTAACAAACT+CGG | - | chr1_1:12274693-12274712 | Msa0008540:CDS | 25.0% |
| !!! | TATTTTTCAATTTCAGGACT+CGG | - | chr1_1:12274771-12274790 | Msa0008540:intron | 25.0% |
| ! | AAATTATATTCTCTGCAAGT+AGG | - | chr1_1:12274853-12274872 | Msa0008540:intron | 25.0% |
| !! | AATACCGATTATTGTAAACA+AGG | - | chr1_1:12274964-12274983 | Msa0008540:intron | 25.0% |
| !! | ATACCGATTATTGTAAACAA+GGG | - | chr1_1:12274965-12274984 | Msa0008540:intron | 25.0% |
| !! | ATTCCCTTGTTTACAATAAT+CGG | + | chr1_1:12274971-12274990 | None:intergenic | 25.0% |
| ! | ATTGACATTTGAATCATTAG+CGG | - | chr1_1:12275249-12275268 | Msa0008540:intron | 25.0% |
| ! | ATTCGTGTTTGAAAATCATT+CGG | + | chr1_1:12275410-12275429 | None:intergenic | 25.0% |
| !! | AGAATTTTTATCGATAGCTA+TGG | - | chr1_1:12275473-12275492 | Msa0008540:intron | 25.0% |
| !! | GTCTTAAACAATACTTTTCA+TGG | - | chr1_1:12275503-12275522 | Msa0008540:CDS | 25.0% |
| ! | TACTTCTTTATCAATACATC+CGG | - | chr1_1:12275699-12275718 | Msa0008540:intron | 25.0% |
| ! | TCTATGCGTAAAAAAAAAAC+TGG | - | chr1_1:12275964-12275983 | Msa0008540:intron | 25.0% |
| ! | GACGTTATATTTCTTATTGA+AGG | - | chr1_1:12276060-12276079 | Msa0008540:intron | 25.0% |
| ! | GTTGATATGTGAAATTAACT+TGG | - | chr1_1:12276153-12276172 | Msa0008540:intron | 25.0% |
| !! | CATTATATGTTCTTTGTTGT+AGG | - | chr1_1:12276176-12276195 | Msa0008540:intron | 25.0% |
| ! | TCGAATAATAAATGCTTCAA+AGG | - | chr1_1:12276223-12276242 | Msa0008540:intron | 25.0% |
| !!! | GTTGATAATTAAGAGTTGAA+TGG | + | chr1_1:12276295-12276314 | None:intergenic | 25.0% |
| ! | AATGAACTGTTAAAAATGCT+TGG | - | chr1_1:12276375-12276394 | Msa0008540:intron | 25.0% |
| !!! | ATAACATAGGTTTTTGTTTG+GGG | + | chr1_1:12276472-12276491 | None:intergenic | 25.0% |
| ! | AAAACCTATGTTATAACTTG+TGG | - | chr1_1:12276478-12276497 | Msa0008540:intron | 25.0% |
| ! | AATTCCACAAGTTATAACAT+AGG | + | chr1_1:12276485-12276504 | None:intergenic | 25.0% |
| ! | TTCATTGTAAAACTCCTTTA+TGG | + | chr1_1:12276527-12276546 | None:intergenic | 25.0% |
| !!! | AAGTTTTTGAAAGGATATTG+AGG | - | chr1_1:12277629-12277648 | Msa0008540:intron | 25.0% |
| !! | CGGTATCTAAATATCATTTT+GGG | + | chr1_1:12278201-12278220 | None:intergenic | 25.0% |
| !! | ACGGTATCTAAATATCATTT+TGG | + | chr1_1:12278202-12278221 | None:intergenic | 25.0% |
| ! | GTATTAGAAATCATCTAGAA+CGG | + | chr1_1:12278221-12278240 | None:intergenic | 25.0% |
| ! | ACAATTAGACAACAAACAAT+TGG | + | chr1_1:12278243-12278262 | None:intergenic | 25.0% |
| ! | TACAATTTCATTATACAAGC+CGG | + | chr1_1:12278483-12278502 | None:intergenic | 25.0% |
| GTTAATCATTTGGTTGCTAA+TGG | + | chr1_1:12270459-12270478 | None:intergenic | 30.0% | |
| AGCAACCAAATGATTAACTA+CGG | - | chr1_1:12270461-12270480 | Msa0008540:three_prime_UTR | 30.0% | |
| TCAAAATTCTTCCTGCAAAA+AGG | + | chr1_1:12270711-12270730 | None:intergenic | 30.0% | |
| ATTAGAACCACTTCAGTTAT+CGG | + | chr1_1:12270787-12270806 | None:intergenic | 30.0% | |
| CCACAACAACTAACAAAAAA+TGG | + | chr1_1:12270856-12270875 | None:intergenic | 30.0% | |
| !!! | CCATTTTTTGTTAGTTGTTG+TGG | - | chr1_1:12270853-12270872 | Msa0008540:CDS | 30.0% |
| TTTCAATGTTTGTGCATATC+TGG | + | chr1_1:12271095-12271114 | None:intergenic | 30.0% | |
| ATGCACAAACATTGAAATGT+CGG | - | chr1_1:12271098-12271117 | Msa0008540:CDS | 30.0% | |
| TACATTCGAACAATGAAACA+CGG | + | chr1_1:12271202-12271221 | None:intergenic | 30.0% | |
| CATCTTTACCTAAAACCTTA+AGG | + | chr1_1:12271536-12271555 | None:intergenic | 30.0% | |
| ! | ACTCAATGTATAGACTCTTT+TGG | - | chr1_1:12271574-12271593 | Msa0008540:intron | 30.0% |
| CAATTAATTGATGCCAAAGT+TGG | + | chr1_1:12271605-12271624 | None:intergenic | 30.0% | |
| CAACTATGCTAGATAGTATA+AGG | - | chr1_1:12271862-12271881 | Msa0008540:intron | 30.0% | |
| AAAAGGAAGAAGAACATAGA+AGG | + | chr1_1:12272307-12272326 | None:intergenic | 30.0% | |
| ! | TCTTTTGTGGAATCGATAAA+TGG | - | chr1_1:12272357-12272376 | Msa0008540:intron | 30.0% |
| ! | CTTTTGTGGAATCGATAAAT+GGG | - | chr1_1:12272358-12272377 | Msa0008540:intron | 30.0% |
| AGAGAGAAGAGAAATTGAAT+TGG | - | chr1_1:12272392-12272411 | Msa0008540:intron | 30.0% | |
| AAGGTTGAATATGAAAAAGG+AGG | - | chr1_1:12272441-12272460 | Msa0008540:intron | 30.0% | |
| ! | ATGAAAAAGGAGGATTTTTG+AGG | - | chr1_1:12272451-12272470 | Msa0008540:intron | 30.0% |
| ATAAAAGTGGGATAAGAGTT+TGG | + | chr1_1:12272496-12272515 | None:intergenic | 30.0% | |
| CCATTGAAGGAAATAAAAGT+GGG | + | chr1_1:12272508-12272527 | None:intergenic | 30.0% | |
| AAGAACCTTGATAAGCTAAA+AGG | + | chr1_1:12272660-12272679 | None:intergenic | 30.0% | |
| ATAAAACTTTCTGCTCCTTA+TGG | - | chr1_1:12272699-12272718 | Msa0008540:intron | 30.0% | |
| ! | TTCTCTTAATAATGGAGTCT+AGG | + | chr1_1:12272937-12272956 | None:intergenic | 30.0% |
| AATCAGAGGGAAATCTTAAT+TGG | - | chr1_1:12273063-12273082 | Msa0008540:intron | 30.0% | |
| AACTTATACATCAAACTGGT+TGG | - | chr1_1:12273128-12273147 | Msa0008540:intron | 30.0% | |
| ACTTATACATCAAACTGGTT+GGG | - | chr1_1:12273129-12273148 | Msa0008540:intron | 30.0% | |
| TCTAGATAACCAAGTTAGTT+AGG | + | chr1_1:12273226-12273245 | None:intergenic | 30.0% | |
| GTGCAATTCAAATAGTAGTT+AGG | + | chr1_1:12273276-12273295 | None:intergenic | 30.0% | |
| TAACCAGAAGTGAGTTAAAA+AGG | - | chr1_1:12273683-12273702 | Msa0008540:intron | 30.0% | |
| CAGATGATCTATAATCTAGA+CGG | - | chr1_1:12273771-12273790 | Msa0008540:intron | 30.0% | |
| ATCCACTTACAGAATTAATG+AGG | - | chr1_1:12273838-12273857 | Msa0008540:CDS | 30.0% | |
| TACCTCATTAATTCTGTAAG+TGG | + | chr1_1:12273843-12273862 | None:intergenic | 30.0% | |
| GACGTAATTTCGAAAATCAA+AGG | + | chr1_1:12273878-12273897 | None:intergenic | 30.0% | |
| AATCAAATCAAGCAAATCGA+TGG | + | chr1_1:12273977-12273996 | None:intergenic | 30.0% | |
| AATATTGTACCTTCCATTGT+GGG | + | chr1_1:12274011-12274030 | None:intergenic | 30.0% | |
| AGTTACAAGAAACTGACAAT+TGG | - | chr1_1:12274072-12274091 | Msa0008540:CDS | 30.0% | |
| ! | ATAAAGGTATAAGACCTCTT+TGG | + | chr1_1:12274155-12274174 | None:intergenic | 30.0% |
| TACATAACATCTGCAAGTTT+GGG | - | chr1_1:12274277-12274296 | Msa0008540:intron | 30.0% | |
| GAAGCTTCTTATGTCATTAA+TGG | + | chr1_1:12274450-12274469 | None:intergenic | 30.0% | |
| TAATGAAGACAACTATGGTA+AGG | - | chr1_1:12274539-12274558 | Msa0008540:intron | 30.0% | |
| !!! | GGATTTGGTTTGACTTTTTT+AGG | + | chr1_1:12274607-12274626 | None:intergenic | 30.0% |
| TGGTATATGATTGTTAGGAT+GGG | + | chr1_1:12274646-12274665 | None:intergenic | 30.0% | |
| TCGAAACAAATCAAATGCTT+GGG | + | chr1_1:12275230-12275249 | None:intergenic | 30.0% | |
| ATCGAAACAAATCAAATGCT+TGG | + | chr1_1:12275231-12275250 | None:intergenic | 30.0% | |
| TCATTAGCGGAAAAGATTAA+TGG | - | chr1_1:12275262-12275281 | Msa0008540:intron | 30.0% | |
| ! | TTTTCAAACACGAATTGCTT+TGG | - | chr1_1:12275415-12275434 | Msa0008540:intron | 30.0% |
| ! | ATCGACTTCTGAACTTAAAT+AGG | + | chr1_1:12275447-12275466 | None:intergenic | 30.0% |
| ! | TGTATTGATAAAGAAGTAGC+CGG | + | chr1_1:12275697-12275716 | None:intergenic | 30.0% |
| AGTAAGATATTAAGCTTGTG+AGG | + | chr1_1:12275755-12275774 | None:intergenic | 30.0% | |
| GTGTTCTGTATGATTTCAAT+CGG | - | chr1_1:12275801-12275820 | Msa0008540:intron | 30.0% | |
| !! | AAGGATATAAGGCATTTTCT+CGG | - | chr1_1:12275830-12275849 | Msa0008540:intron | 30.0% |
| TATGATCATACTATTCTTGC+AGG | - | chr1_1:12275993-12276012 | Msa0008540:intron | 30.0% | |
| ATGATCATACTATTCTTGCA+GGG | - | chr1_1:12275994-12276013 | Msa0008540:intron | 30.0% | |
| AAGATAAGGCAAACAGTTTA+AGG | + | chr1_1:12276112-12276131 | None:intergenic | 30.0% | |
| TTCCAAGTATCAAATATGAG+AGG | + | chr1_1:12276357-12276376 | None:intergenic | 30.0% | |
| ATTGTAAAACTCCTTTATGG+AGG | + | chr1_1:12276524-12276543 | None:intergenic | 30.0% | |
| ! | AGGAGTTTTACAATGAAATC+AGG | - | chr1_1:12276530-12276549 | Msa0008540:intron | 30.0% |
| GCAGATATATTAGCAAAGTA+TGG | + | chr1_1:12276596-12276615 | None:intergenic | 30.0% | |
| TACTTGTGGGTAATTTATTG+GGG | + | chr1_1:12276813-12276832 | None:intergenic | 30.0% | |
| CTACTTGTGGGTAATTTATT+GGG | + | chr1_1:12276814-12276833 | None:intergenic | 30.0% | |
| AACTCTAATGGTAGTTATTC+AGG | + | chr1_1:12276837-12276856 | None:intergenic | 30.0% | |
| ATTCCTACACATTCCAAATA+CGG | - | chr1_1:12277099-12277118 | Msa0008540:CDS | 30.0% | |
| ! | AGGAAAAAATGCTACTTGTT+GGG | + | chr1_1:12277149-12277168 | None:intergenic | 30.0% |
| ! | AAGGAAAAAATGCTACTTGT+TGG | + | chr1_1:12277150-12277169 | None:intergenic | 30.0% |
| TACAATATTCCTGTCTGATT+CGG | + | chr1_1:12277345-12277364 | None:intergenic | 30.0% | |
| ATAGTATCTGCCAAAGAAAT+AGG | - | chr1_1:12277374-12277393 | Msa0008540:intron | 30.0% | |
| ! | TGTAGTTGTTCCTATTTCTT+TGG | + | chr1_1:12277387-12277406 | None:intergenic | 30.0% |
| ! | AGAGATCAGGATCAAATTTT+TGG | + | chr1_1:12277532-12277551 | None:intergenic | 30.0% |
| TCCTGATCTCTTAATTCATT+TGG | - | chr1_1:12277541-12277560 | Msa0008540:intron | 30.0% | |
| TCCAAATGAATTAAGAGATC+AGG | + | chr1_1:12277545-12277564 | None:intergenic | 30.0% | |
| TCTTAATTCATTTGGATGAC+AGG | - | chr1_1:12277549-12277568 | Msa0008540:intron | 30.0% | |
| AGGTCAGTGAGAAAAAAAAT+TGG | - | chr1_1:12277858-12277877 | Msa0008540:intron | 30.0% | |
| TATCTTTATCTGTGTGTACA+TGG | - | chr1_1:12277919-12277938 | Msa0008540:intron | 30.0% | |
| TTTCGTTGCTCTAACATTAA+AGG | - | chr1_1:12278054-12278073 | Msa0008540:intron | 30.0% | |
| TTCGTTGCTCTAACATTAAA+GGG | - | chr1_1:12278055-12278074 | Msa0008540:intron | 30.0% | |
| TTATCATGATACTTGTCTGT+AGG | - | chr1_1:12278264-12278283 | Msa0008540:intron | 30.0% | |
| ATCATGTTGTCAATAAAGTC+AGG | + | chr1_1:12278293-12278312 | None:intergenic | 30.0% | |
| TAACCACAAACTTGTATGTA+TGG | - | chr1_1:12278393-12278412 | Msa0008540:CDS | 30.0% | |
| AACCACAAACTTGTATGTAT+GGG | - | chr1_1:12278394-12278413 | Msa0008540:CDS | 30.0% | |
| ! | TTGCTAATGGTGTTGGAAAT+GGG | + | chr1_1:12270446-12270465 | None:intergenic | 35.0% |
| TACCATAACAGAGTATGATG+AGG | - | chr1_1:12270550-12270569 | Msa0008540:CDS | 35.0% | |
| !! | TTGCAGGAAGAATTTTGAAG+AGG | - | chr1_1:12270713-12270732 | Msa0008540:intron | 35.0% |
| !! | AGGAAGAATTTTGAAGAGGA+TGG | - | chr1_1:12270717-12270736 | Msa0008540:intron | 35.0% |
| !! | AAGAATTTTGAAGAGGATGG+TGG | - | chr1_1:12270720-12270739 | Msa0008540:intron | 35.0% |
| TTAGAACCACTTCAGTTATC+GGG | + | chr1_1:12270786-12270805 | None:intergenic | 35.0% | |
| !! | AGCACTGAAGAATTTTGCTA+AGG | - | chr1_1:12270816-12270835 | Msa0008540:CDS | 35.0% |
| TTTGTTAGTTGTTGTGGTCA+AGG | - | chr1_1:12270859-12270878 | Msa0008540:CDS | 35.0% | |
| CACGAACACTCCTTAAAATA+CGG | + | chr1_1:12271009-12271028 | None:intergenic | 35.0% | |
| CTAAGTGTTAGTGTCATATC+CGG | + | chr1_1:12271268-12271287 | None:intergenic | 35.0% | |
| GGATATGACACTAACACTTA+GGG | - | chr1_1:12271267-12271286 | Msa0008540:CDS | 35.0% | |
| TTACCTAAAACCTTAAGGGT+GGG | + | chr1_1:12271531-12271550 | None:intergenic | 35.0% | |
| TTTACCTAAAACCTTAAGGG+TGG | + | chr1_1:12271532-12271551 | None:intergenic | 35.0% | |
| TTGCTGCAAGCAAATGTAAT+AGG | + | chr1_1:12271709-12271728 | None:intergenic | 35.0% | |
| ! | ATTTTGTGTAGGATTGCAGA+TGG | - | chr1_1:12271955-12271974 | Msa0008540:intron | 35.0% |
| GATGCACAATATCATCTAGT+AGG | + | chr1_1:12271999-12272018 | None:intergenic | 35.0% | |
| !! | CTTTTTGATGACAGAAAGTG+AGG | - | chr1_1:12272415-12272434 | Msa0008540:intron | 35.0% |
| ATGACAGAAAGTGAGGTTAA+AGG | - | chr1_1:12272422-12272441 | Msa0008540:intron | 35.0% | |
| !!! | AAGGAGGATTTTTGAGGTAA+AGG | - | chr1_1:12272457-12272476 | Msa0008540:intron | 35.0% |
| !! | CCCACTTTTATTTCCTTCAA+TGG | - | chr1_1:12272505-12272524 | Msa0008540:intron | 35.0% |
| GCCATTGAAGGAAATAAAAG+TGG | + | chr1_1:12272509-12272528 | None:intergenic | 35.0% | |
| ! | AGAACATCCAGTTTTCAATC+TGG | + | chr1_1:12272599-12272618 | None:intergenic | 35.0% |
| ! | GATTTCGTTCAAGGAGATTT+TGG | + | chr1_1:12272764-12272783 | None:intergenic | 35.0% |
| ACATAACCGTCTACTCTTTA+TGG | + | chr1_1:12272825-12272844 | None:intergenic | 35.0% | |
| ACTAAGCAACCTAACTAACT+TGG | - | chr1_1:12273214-12273233 | Msa0008540:CDS | 35.0% | |
| ATCTATCAGATTGTAGGTCT+CGG | - | chr1_1:12273341-12273360 | Msa0008540:intron | 35.0% | |
| TAATGCTATATCGTGAAGAC+AGG | - | chr1_1:12273384-12273403 | Msa0008540:intron | 35.0% | |
| GCAAAATGTAACAGCTTCAT+TGG | - | chr1_1:12273654-12273673 | Msa0008540:CDS | 35.0% | |
| !! | GTTCCTTTTTAACTCACTTC+TGG | + | chr1_1:12273689-12273708 | None:intergenic | 35.0% |
| GAATATTGTACCTTCCATTG+TGG | + | chr1_1:12274012-12274031 | None:intergenic | 35.0% | |
| ACTGACAATTGGTCGTATAA+TGG | - | chr1_1:12274083-12274102 | Msa0008540:CDS | 35.0% | |
| TAGATCATGCTTATCCAAAG+AGG | - | chr1_1:12274138-12274157 | Msa0008540:intron | 35.0% | |
| GTAAGTGCCTTTGTCAATAA+AGG | + | chr1_1:12274171-12274190 | None:intergenic | 35.0% | |
| ATAAGAATACTGAGCTTTCC+TGG | + | chr1_1:12274212-12274231 | None:intergenic | 35.0% | |
| CTACATAACATCTGCAAGTT+TGG | - | chr1_1:12274276-12274295 | Msa0008540:intron | 35.0% | |
| ATAGAAGAAAGACTAGATGG+TGG | + | chr1_1:12274482-12274501 | None:intergenic | 35.0% | |
| TGGATAGAAGAAAGACTAGA+TGG | + | chr1_1:12274485-12274504 | None:intergenic | 35.0% | |
| CTATGGTAAGGATCTTATAG+CGG | - | chr1_1:12274551-12274570 | Msa0008540:intron | 35.0% | |
| TATGGTAAGGATCTTATAGC+GGG | - | chr1_1:12274552-12274571 | Msa0008540:intron | 35.0% | |
| AAAAGTCAAACCAAATCCCT+AGG | - | chr1_1:12274609-12274628 | Msa0008540:intron | 35.0% | |
| GTGGTATATGATTGTTAGGA+TGG | + | chr1_1:12274647-12274666 | None:intergenic | 35.0% | |
| AGGTGTGGTATATGATTGTT+AGG | + | chr1_1:12274651-12274670 | None:intergenic | 35.0% | |
| AATCATATACCACACCTTAG+AGG | - | chr1_1:12274654-12274673 | Msa0008540:intron | 35.0% | |
| AATCATCTCTTTGTTACGTG+CGG | + | chr1_1:12274685-12274704 | None:intergenic | 35.0% | |
| !! | CAAGTTGGTATTGTGAATGA+AGG | - | chr1_1:12274799-12274818 | Msa0008540:intron | 35.0% |
| TCATCGTCTTGCAGATAATA+AGG | - | chr1_1:12274891-12274910 | Msa0008540:intron | 35.0% | |
| TTTATTTGTTCCCCCTCTAT+AGG | - | chr1_1:12275009-12275028 | Msa0008540:intron | 35.0% | |
| TGTACACATTGTCCTATAGA+GGG | + | chr1_1:12275024-12275043 | None:intergenic | 35.0% | |
| TTGTACACATTGTCCTATAG+AGG | + | chr1_1:12275025-12275044 | None:intergenic | 35.0% | |
| GTGTACAAGTTTATCATGCT+AGG | - | chr1_1:12275037-12275056 | Msa0008540:intron | 35.0% | |
| TACAAGTTTATCATGCTAGG+TGG | - | chr1_1:12275040-12275059 | Msa0008540:intron | 35.0% | |
| !! | TTCATGGGTGTTGTTACTTT+AGG | - | chr1_1:12275143-12275162 | Msa0008540:intron | 35.0% |
| !! | GGTGTTGTTACTTTAGGAAT+TGG | - | chr1_1:12275149-12275168 | Msa0008540:intron | 35.0% |
| !! | GTTGTTACTTTAGGAATTGG+AGG | - | chr1_1:12275152-12275171 | Msa0008540:intron | 35.0% |
| ! | TGATTTCAATCGGCTTCATA+AGG | - | chr1_1:12275811-12275830 | Msa0008540:intron | 35.0% |
| ! | ATCGGCTTCATAAGGATATA+AGG | - | chr1_1:12275819-12275838 | Msa0008540:intron | 35.0% |
| AAATTCGTATGCAACTGGAA+TGG | + | chr1_1:12275873-12275892 | None:intergenic | 35.0% | |
| ATTCCAGTTGCATACGAATT+TGG | - | chr1_1:12275872-12275891 | Msa0008540:intron | 35.0% | |
| CTCCTCTCATATTTGATACT+TGG | - | chr1_1:12276352-12276371 | Msa0008540:intron | 35.0% | |
| GCTACACTATTTACAGATCT+AGG | - | chr1_1:12276614-12276633 | Msa0008540:intron | 35.0% | |
| GCTACTTGTGGGTAATTTAT+TGG | + | chr1_1:12276815-12276834 | None:intergenic | 35.0% | |
| TAGTTATTCAGGCTACTTGT+GGG | + | chr1_1:12276826-12276845 | None:intergenic | 35.0% | |
| ATAACTACCATTAGAGTTGC+AGG | - | chr1_1:12276839-12276858 | Msa0008540:CDS | 35.0% | |
| TTGTTGCCTGAGCTATAATT+TGG | - | chr1_1:12277041-12277060 | Msa0008540:CDS | 35.0% | |
| TCATCACCAAATTATAGCTC+AGG | + | chr1_1:12277050-12277069 | None:intergenic | 35.0% | |
| !! | ATACTACTTTTGAACTGGTC+TGG | + | chr1_1:12277126-12277145 | None:intergenic | 35.0% |
| !! | TTGGGATACTACTTTTGAAC+TGG | + | chr1_1:12277131-12277150 | None:intergenic | 35.0% |
| ! | ACTTATTGGTCTCTTGTCAA+AGG | + | chr1_1:12277169-12277188 | None:intergenic | 35.0% |
| ATGGATGAAGGGAAACTTAT+TGG | + | chr1_1:12277183-12277202 | None:intergenic | 35.0% | |
| !!! | CTTTTTCAGAATGACAACTG+TGG | + | chr1_1:12277210-12277229 | None:intergenic | 35.0% |
| ! | CACAGTTGTCATTCTGAAAA+AGG | - | chr1_1:12277208-12277227 | Msa0008540:intron | 35.0% |
| ! | AAGCAAATTTGAAGCAGCTT+CGG | + | chr1_1:12277249-12277268 | None:intergenic | 35.0% |
| TCAGCCTGTAGATTACATAA+AGG | - | chr1_1:12277306-12277325 | Msa0008540:intron | 35.0% | |
| CTGTCCTTTATGTAATCTAC+AGG | + | chr1_1:12277313-12277332 | None:intergenic | 35.0% | |
| !! | TTAATTTTTGGACTGACCCA+TGG | + | chr1_1:12277439-12277458 | None:intergenic | 35.0% |
| TCAAATATTGTGTGGAGAGT+AGG | + | chr1_1:12277476-12277495 | None:intergenic | 35.0% | |
| GAGTGATGTCAAATATTGTG+TGG | + | chr1_1:12277484-12277503 | None:intergenic | 35.0% | |
| CATAAGCTTCTAATGTTTGC+TGG | - | chr1_1:12277684-12277703 | Msa0008540:intron | 35.0% | |
| CTGTGAAAATAAGATTGCTC+AGG | - | chr1_1:12277838-12277857 | Msa0008540:intron | 35.0% | |
| GTACATGGATGTATGTGAAA+TGG | - | chr1_1:12277934-12277953 | Msa0008540:intron | 35.0% | |
| GTGCGACAAAAATATACATC+AGG | + | chr1_1:12277982-12278001 | None:intergenic | 35.0% | |
| TACTTAGCGTGGAAACTATA+TGG | - | chr1_1:12278008-12278027 | Msa0008540:intron | 35.0% | |
| TGAGAAACTATGAAGAGTTG+AGG | - | chr1_1:12278098-12278117 | Msa0008540:CDS | 35.0% | |
| GAGAAACTATGAAGAGTTGA+GGG | - | chr1_1:12278099-12278118 | Msa0008540:CDS | 35.0% | |
| ACCTAAAATACACCATCAGA+TGG | - | chr1_1:12278313-12278332 | Msa0008540:CDS | 35.0% | |
| !! | ACCATCTGATGGTGTATTTT+AGG | + | chr1_1:12278317-12278336 | None:intergenic | 35.0% |
| TTGTGGTTAAGATCTACTGT+GGG | + | chr1_1:12278382-12278401 | None:intergenic | 35.0% | |
| TTTGTGGTTAAGATCTACTG+TGG | + | chr1_1:12278383-12278402 | None:intergenic | 35.0% | |
| CGAAATGCTAGATATGAATC+CGG | - | chr1_1:12278461-12278480 | Msa0008540:five_prime_UTR | 35.0% | |
| ! | GTGTTGGAAATGGGGTTTTA+GGG | + | chr1_1:12270437-12270456 | None:intergenic | 40.0% |
| ! | TGCTAATGGTGTTGGAAATG+GGG | + | chr1_1:12270445-12270464 | None:intergenic | 40.0% |
| ! | GTTGCTAATGGTGTTGGAAA+TGG | + | chr1_1:12270447-12270466 | None:intergenic | 40.0% |
| CATTTGGTTGCTAATGGTGT+TGG | + | chr1_1:12270453-12270472 | None:intergenic | 40.0% | |
| CTCCTCATCATACTCTGTTA+TGG | + | chr1_1:12270555-12270574 | None:intergenic | 40.0% | |
| GGAGTACAGTTCAAAGATTG+AGG | - | chr1_1:12270571-12270590 | Msa0008540:CDS | 40.0% | |
| ! | TGAACGATGTTCCTTTTTGC+AGG | - | chr1_1:12270697-12270716 | Msa0008540:intron | 40.0% |
| TAGAACCACTTCAGTTATCG+GGG | + | chr1_1:12270785-12270804 | None:intergenic | 40.0% | |
| !! | ATCGCGACTTTTGACTACAA+CGG | + | chr1_1:12270895-12270914 | None:intergenic | 40.0% |
| GTAGTCAAAAGTCGCGATTT+CGG | - | chr1_1:12270897-12270916 | Msa0008540:intron | 40.0% | |
| AAAATGACACGAGTGACCAA+CGG | - | chr1_1:12271139-12271158 | Msa0008540:CDS | 40.0% | |
| GCACAAACACAAACAGAAAC+CGG | - | chr1_1:12271246-12271265 | Msa0008540:intron | 40.0% | |
| CGGATATGACACTAACACTT+AGG | - | chr1_1:12271266-12271285 | Msa0008540:CDS | 40.0% | |
| ACTAACACTTAGGGTCTGTT+TGG | - | chr1_1:12271276-12271295 | Msa0008540:CDS | 40.0% | |
| !!! | TTTGGCTTGAGGTTTTAGGA+GGG | + | chr1_1:12271508-12271527 | None:intergenic | 40.0% |
| ! | TAAAACCTTAAGGGTGGGTT+TGG | + | chr1_1:12271526-12271545 | None:intergenic | 40.0% |
| ! | AAACCCACCCTTAAGGTTTT+AGG | - | chr1_1:12271525-12271544 | Msa0008540:intron | 40.0% |
| !! | TCTTTTGGAAGTCCCAACTT+TGG | - | chr1_1:12271589-12271608 | Msa0008540:intron | 40.0% |
| AGTCGTGAGGATATCAATAG+AGG | + | chr1_1:12271826-12271845 | None:intergenic | 40.0% | |
| ATCATCTAGTAGGTGAACCA+AGG | + | chr1_1:12271989-12272008 | None:intergenic | 40.0% | |
| ! | CATTTTCATGGTTCGTGGAA+AGG | + | chr1_1:12272050-12272069 | None:intergenic | 40.0% |
| ! | TGTAGCATTTTCATGGTTCG+TGG | + | chr1_1:12272055-12272074 | None:intergenic | 40.0% |
| GAACCATGAAAATGCTACAC+AGG | - | chr1_1:12272056-12272075 | Msa0008540:intron | 40.0% | |
| ! | CTACCTGTGTAGCATTTTCA+TGG | + | chr1_1:12272062-12272081 | None:intergenic | 40.0% |
| ! | CAGTTTTCAATCTGGATGGA+AGG | + | chr1_1:12272591-12272610 | None:intergenic | 40.0% |
| CTTCCATCCAGATTGAAAAC+TGG | - | chr1_1:12272589-12272608 | Msa0008540:intron | 40.0% | |
| ! | CATCCAGTTTTCAATCTGGA+TGG | + | chr1_1:12272595-12272614 | None:intergenic | 40.0% |
| AAATCCCCAGCTACTTCTTA+GGG | - | chr1_1:12272779-12272798 | Msa0008540:intron | 40.0% | |
| TTCATCCCTAAGAAGTAGCT+GGG | + | chr1_1:12272787-12272806 | None:intergenic | 40.0% | |
| TCTACTCTTTATGGAAGGTG+GGG | + | chr1_1:12272816-12272835 | None:intergenic | 40.0% | |
| GTCTACTCTTTATGGAAGGT+GGG | + | chr1_1:12272817-12272836 | None:intergenic | 40.0% | |
| CACCTTCCATAAAGAGTAGA+CGG | - | chr1_1:12272816-12272835 | Msa0008540:intron | 40.0% | |
| AACCGTCTACTCTTTATGGA+AGG | + | chr1_1:12272821-12272840 | None:intergenic | 40.0% | |
| AGTAGACGGTTATGTTCTCT+AGG | - | chr1_1:12272830-12272849 | Msa0008540:intron | 40.0% | |
| ATCACACACACACTTACAAG+AGG | - | chr1_1:12273033-12273052 | Msa0008540:intron | 40.0% | |
| TCACACACACACTTACAAGA+GGG | - | chr1_1:12273034-12273053 | Msa0008540:intron | 40.0% | |
| AAGAGGGAAAGGAAATCAGA+GGG | - | chr1_1:12273050-12273069 | Msa0008540:intron | 40.0% | |
| CAGAGGGAAATCTTAATTGG+TGG | - | chr1_1:12273066-12273085 | Msa0008540:intron | 40.0% | |
| TTGTAAAGACCAACCCACAA+TGG | - | chr1_1:12273995-12274014 | Msa0008540:intron | 40.0% | |
| !! | CTATCCATACTGCTTGTTGT+TGG | - | chr1_1:12274498-12274517 | Msa0008540:intron | 40.0% |
| !! | ATCTTATAGCGGGTTCATCA+TGG | - | chr1_1:12274562-12274581 | Msa0008540:intron | 40.0% |
| ATGATTGTTAGGATGGGAGT+GGG | + | chr1_1:12274640-12274659 | None:intergenic | 40.0% | |
| TATGATTGTTAGGATGGGAG+TGG | + | chr1_1:12274641-12274660 | None:intergenic | 40.0% | |
| TGGTATTGTGAATGAAGGCT+TGG | - | chr1_1:12274804-12274823 | Msa0008540:intron | 40.0% | |
| TATTGTGAATGAAGGCTTGG+TGG | - | chr1_1:12274807-12274826 | Msa0008540:intron | 40.0% | |
| TACACATTGTCCTATAGAGG+GGG | + | chr1_1:12275022-12275041 | None:intergenic | 40.0% | |
| GTACACATTGTCCTATAGAG+GGG | + | chr1_1:12275023-12275042 | None:intergenic | 40.0% | |
| ! | AACACGAATTGCTTTGGCTT+TGG | - | chr1_1:12275421-12275440 | Msa0008540:intron | 40.0% |
| ACCTGAGAATTTGTCCATGT+AGG | - | chr1_1:12275571-12275590 | Msa0008540:intron | 40.0% | |
| ACCTACATGGACAAATTCTC+AGG | + | chr1_1:12275575-12275594 | None:intergenic | 40.0% | |
| TAAGCAACTCAAGACCTACA+TGG | + | chr1_1:12275588-12275607 | None:intergenic | 40.0% | |
| ! | CAAGTTGGCCAGTAAATTCT+TGG | - | chr1_1:12275663-12275682 | Msa0008540:intron | 40.0% |
| ATAAAGAAGTAGCCGGAGAT+GGG | + | chr1_1:12275690-12275709 | None:intergenic | 40.0% | |
| ACATCCGGTAAGCTTAAATC+CGG | - | chr1_1:12275714-12275733 | Msa0008540:intron | 40.0% | |
| GAGGATGATGATAAATCCAC+CGG | + | chr1_1:12275736-12275755 | None:intergenic | 40.0% | |
| ATGCCAAATTCGTATGCAAC+TGG | + | chr1_1:12275878-12275897 | None:intergenic | 40.0% | |
| ! | GAGAGTTTTGCTGATACTGA+TGG | - | chr1_1:12276027-12276046 | Msa0008540:intron | 40.0% |
| !! | TTCAAAGGTGTTGAGTGCTA+TGG | - | chr1_1:12276238-12276257 | Msa0008540:intron | 40.0% |
| GAGTGCTATGGTTACTAAGT+CGG | - | chr1_1:12276250-12276269 | Msa0008540:intron | 40.0% | |
| AACACCATCATCCTCCATAA+AGG | - | chr1_1:12276510-12276529 | Msa0008540:intron | 40.0% | |
| AACTCCTTTATGGAGGATGA+TGG | + | chr1_1:12276517-12276536 | None:intergenic | 40.0% | |
| TTAGACACCTGCACAAAACA+CGG | - | chr1_1:12276687-12276706 | Msa0008540:intron | 40.0% | |
| GTAGTTATTCAGGCTACTTG+TGG | + | chr1_1:12276827-12276846 | None:intergenic | 40.0% | |
| ACCAGTGAAAGTCTGTTGTT+AGG | - | chr1_1:12276945-12276964 | Msa0008540:intron | 40.0% | |
| TCCATAGTCTTTCGAATACC+CGG | - | chr1_1:12277007-12277026 | Msa0008540:intron | 40.0% | |
| GCAACAAAGACGTTAATTCC+GGG | + | chr1_1:12277028-12277047 | None:intergenic | 40.0% | |
| GGCAACAAAGACGTTAATTC+CGG | + | chr1_1:12277029-12277048 | None:intergenic | 40.0% | |
| TTTCAGAATGACAACTGTGG+AGG | + | chr1_1:12277207-12277226 | None:intergenic | 40.0% | |
| GTCTACCATTCATGCATTCA+AGG | + | chr1_1:12277286-12277305 | None:intergenic | 40.0% | |
| TATACATGTCCGAATCAGAC+AGG | - | chr1_1:12277333-12277352 | Msa0008540:intron | 40.0% | |
| ACCCATGGATCGCAAATATA+GGG | + | chr1_1:12277424-12277443 | None:intergenic | 40.0% | |
| ATTGTGTGGAGAGTAGGAAA+TGG | + | chr1_1:12277470-12277489 | None:intergenic | 40.0% | |
| TGGAAACACATATGTCAGTG+TGG | - | chr1_1:12277754-12277773 | Msa0008540:intron | 40.0% | |
| TATGTGAAATGGCCCCAAAT+GGG | - | chr1_1:12277945-12277964 | Msa0008540:intron | 40.0% | |
| GTTATATGGACACCCATTTG+GGG | + | chr1_1:12277960-12277979 | None:intergenic | 40.0% | |
| GGTTATATGGACACCCATTT+GGG | + | chr1_1:12277961-12277980 | None:intergenic | 40.0% | |
| AGGTTATATGGACACCCATT+TGG | + | chr1_1:12277962-12277981 | None:intergenic | 40.0% | |
| ACTATGAAGAGTTGAGGGAA+AGG | - | chr1_1:12278104-12278123 | Msa0008540:CDS | 40.0% | |
| AGCCCATACATACAAGTTTG+TGG | + | chr1_1:12278399-12278418 | None:intergenic | 40.0% | |
| AACTTGTATGTATGGGCTCA+AGG | - | chr1_1:12278401-12278420 | Msa0008540:CDS | 40.0% | |
| !!! | GAAATGGGGTTTTAGGGTTG+AGG | + | chr1_1:12270431-12270450 | None:intergenic | 45.0% |
| !! | GGTGTTGGAAATGGGGTTTT+AGG | + | chr1_1:12270438-12270457 | None:intergenic | 45.0% |
| !! | TTGAAGAGGATGGTGGACTT+AGG | - | chr1_1:12270727-12270746 | Msa0008540:intron | 45.0% |
| ACAAGATGTCTAGCTAAGGC+TGG | + | chr1_1:12270760-12270779 | None:intergenic | 45.0% | |
| GGACACAAGATGTCTAGCTA+AGG | + | chr1_1:12270764-12270783 | None:intergenic | 45.0% | |
| CGCAATTCGTAACGCAACAT+CGG | + | chr1_1:12270929-12270948 | None:intergenic | 45.0% | |
| CGATGTTGCGTTACGAATTG+CGG | - | chr1_1:12270927-12270946 | Msa0008540:intron | 45.0% | |
| CCTTAAAATACGGCACACAC+AGG | + | chr1_1:12270999-12271018 | None:intergenic | 45.0% | |
| ! | CCTGTGTGTGCCGTATTTTA+AGG | - | chr1_1:12270996-12271015 | Msa0008540:intron | 45.0% |
| AAATGACACGAGTGACCAAC+GGG | - | chr1_1:12271140-12271159 | Msa0008540:CDS | 45.0% | |
| ACACTTAGGGTCTGTTTGGA+TGG | - | chr1_1:12271280-12271299 | Msa0008540:CDS | 45.0% | |
| TTAGGGTCTGTTTGGATGGA+GGG | - | chr1_1:12271284-12271303 | Msa0008540:CDS | 45.0% | |
| TCTGTTTGGATGGAGGGTTT+AGG | - | chr1_1:12271290-12271309 | Msa0008540:CDS | 45.0% | |
| TTTGGATGGAGGGTTTAGGA+GGG | - | chr1_1:12271294-12271313 | Msa0008540:CDS | 45.0% | |
| !!! | TTGAGGTTTTAGGAGGGGAA+GGG | + | chr1_1:12271502-12271521 | None:intergenic | 45.0% |
| !!! | TTGGCTTGAGGTTTTAGGAG+GGG | + | chr1_1:12271507-12271526 | None:intergenic | 45.0% |
| !!! | GTTTGGCTTGAGGTTTTAGG+AGG | + | chr1_1:12271509-12271528 | None:intergenic | 45.0% |
| !!! | TGGGTTTGGCTTGAGGTTTT+AGG | + | chr1_1:12271512-12271531 | None:intergenic | 45.0% |
| TGCAGATGGAATTCCATCCT+TGG | - | chr1_1:12271969-12271988 | Msa0008540:intron | 45.0% | |
| TCTAGTAGGTGAACCAAGGA+TGG | + | chr1_1:12271985-12272004 | None:intergenic | 45.0% | |
| !! | AAGAGTAGCTTGCTTTGCGT+TGG | - | chr1_1:12272020-12272039 | Msa0008540:intron | 45.0% |
| ATTGGTCCTTGCAACAACGT+TGG | + | chr1_1:12272562-12272581 | None:intergenic | 45.0% | |
| CGTTGTTGCAAGGACCAATT+TGG | - | chr1_1:12272563-12272582 | Msa0008540:intron | 45.0% | |
| GATCAAGTTTCCTTCCCTCT+AGG | - | chr1_1:12272728-12272747 | Msa0008540:intron | 45.0% | |
| TTGGCAAGGAAGAACCTAGA+GGG | + | chr1_1:12272745-12272764 | None:intergenic | 45.0% | |
| TTTGGCAAGGAAGAACCTAG+AGG | + | chr1_1:12272746-12272765 | None:intergenic | 45.0% | |
| !! | CGTTCAAGGAGATTTTGGCA+AGG | + | chr1_1:12272759-12272778 | None:intergenic | 45.0% |
| GAAATCCCCAGCTACTTCTT+AGG | - | chr1_1:12272778-12272797 | Msa0008540:intron | 45.0% | |
| TCATCCCTAAGAAGTAGCTG+GGG | + | chr1_1:12272786-12272805 | None:intergenic | 45.0% | |
| CTTCATCCCTAAGAAGTAGC+TGG | + | chr1_1:12272788-12272807 | None:intergenic | 45.0% | |
| CTACTCTTTATGGAAGGTGG+GGG | + | chr1_1:12272815-12272834 | None:intergenic | 45.0% | |
| CGTCTACTCTTTATGGAAGG+TGG | + | chr1_1:12272818-12272837 | None:intergenic | 45.0% | |
| ! | CAACTTCACGACAGCTTGTT+TGG | + | chr1_1:12272891-12272910 | None:intergenic | 45.0% |
| ACAAGCTGTCGTGAAGTTGA+CGG | - | chr1_1:12272892-12272911 | Msa0008540:intron | 45.0% | |
| TGTCGTGAAGTTGACGGAAA+AGG | - | chr1_1:12272898-12272917 | Msa0008540:intron | 45.0% | |
| CACACACTTACAAGAGGGAA+AGG | - | chr1_1:12273039-12273058 | Msa0008540:intron | 45.0% | |
| CAAGAGGGAAAGGAAATCAG+AGG | - | chr1_1:12273049-12273068 | Msa0008540:intron | 45.0% | |
| GGGCTTACAAGTAACTAGAG+AGG | - | chr1_1:12273149-12273168 | Msa0008540:intron | 45.0% | |
| !! | CAAACGTTGGCTCTCAAAGT+AGG | + | chr1_1:12273953-12273972 | None:intergenic | 45.0% |
| ! | CTACTTTGAGAGCCAACGTT+TGG | - | chr1_1:12273951-12273970 | Msa0008540:intron | 45.0% |
| AAAGACCAACCCACAATGGA+AGG | - | chr1_1:12273999-12274018 | Msa0008540:intron | 45.0% | |
| TTGTACCTTCCATTGTGGGT+TGG | + | chr1_1:12274007-12274026 | None:intergenic | 45.0% | |
| GCACTTACGTCTGCTAATGA+AGG | - | chr1_1:12274183-12274202 | Msa0008540:intron | 45.0% | |
| TTCTGTCTGTGCTCATTGTG+GGG | + | chr1_1:12274725-12274744 | None:intergenic | 45.0% | |
| GTTCTGTCTGTGCTCATTGT+GGG | + | chr1_1:12274726-12274745 | None:intergenic | 45.0% | |
| TGTTCTGTCTGTGCTCATTG+TGG | + | chr1_1:12274727-12274746 | None:intergenic | 45.0% | |
| !! | AGGCTTGGTGGAATTACTGA+AGG | - | chr1_1:12274819-12274838 | Msa0008540:intron | 45.0% |
| ! | GGTGGAATTACTGAAGGTGT+TGG | - | chr1_1:12274825-12274844 | Msa0008540:intron | 45.0% |
| CATCACCAAGATATCCTCCT+TGG | + | chr1_1:12275081-12275100 | None:intergenic | 45.0% | |
| GAGTTGCTTACTGAGCTACT+TGG | - | chr1_1:12275598-12275617 | Msa0008540:intron | 45.0% | |
| !! | TGCTGCGGCTTTATTCAAGT+TGG | - | chr1_1:12275648-12275667 | Msa0008540:intron | 45.0% |
| AGATGGGGCCAAGAATTTAC+TGG | + | chr1_1:12275674-12275693 | None:intergenic | 45.0% | |
| TAAATTCTTGGCCCCATCTC+CGG | - | chr1_1:12275675-12275694 | Msa0008540:intron | 45.0% | |
| TAAAGAAGTAGCCGGAGATG+GGG | + | chr1_1:12275689-12275708 | None:intergenic | 45.0% | |
| GATAAAGAAGTAGCCGGAGA+TGG | + | chr1_1:12275691-12275710 | None:intergenic | 45.0% | |
| TCCACCGGATTTAAGCTTAC+CGG | + | chr1_1:12275721-12275740 | None:intergenic | 45.0% | |
| TGCAACTGGAATGGAAGACA+TGG | + | chr1_1:12275864-12275883 | None:intergenic | 45.0% | |
| CATCCTGCACTACTAACTAC+AGG | - | chr1_1:12276570-12276589 | Msa0008540:intron | 45.0% | |
| TAGACACCTGCACAAAACAC+GGG | - | chr1_1:12276688-12276707 | Msa0008540:intron | 45.0% | |
| !! | TCTAGCGTGATTTTGGAGAC+CGG | + | chr1_1:12276762-12276781 | None:intergenic | 45.0% |
| ! | CAGCTGTTCTAGCGTGATTT+TGG | + | chr1_1:12276769-12276788 | None:intergenic | 45.0% |
| GAGATTGCCTGCAACTCTAA+TGG | + | chr1_1:12276849-12276868 | None:intergenic | 45.0% | |
| ATCGGAAGTAATGCAGACTG+TGG | + | chr1_1:12276873-12276892 | None:intergenic | 45.0% | |
| TGCAGCGTCACAATTCACTT+TGG | - | chr1_1:12276902-12276921 | Msa0008540:CDS | 45.0% | |
| CACTTTGGTTAATCAGCAGC+TGG | - | chr1_1:12276917-12276936 | Msa0008540:CDS | 45.0% | |
| GCCTAACAACAGACTTTCAC+TGG | + | chr1_1:12276949-12276968 | None:intergenic | 45.0% | |
| TTGTTAGGCTGATGTAGCCA+TGG | - | chr1_1:12276960-12276979 | Msa0008540:intron | 45.0% | |
| TAGCCATGGTGAGATGTGAT+GGG | - | chr1_1:12276974-12276993 | Msa0008540:intron | 45.0% | |
| ATTCCCATCACATCTCACCA+TGG | + | chr1_1:12276980-12276999 | None:intergenic | 45.0% | |
| TCCGGGTATTCGAAAGACTA+TGG | + | chr1_1:12277011-12277030 | None:intergenic | 45.0% | |
| ! | GGACCGTATTTGGAATGTGT+AGG | + | chr1_1:12277105-12277124 | None:intergenic | 45.0% |
| ACTGTGGAGGAATGGATGAA+GGG | + | chr1_1:12277194-12277213 | None:intergenic | 45.0% | |
| AACTGTGGAGGAATGGATGA+AGG | + | chr1_1:12277195-12277214 | None:intergenic | 45.0% | |
| GAATGACAACTGTGGAGGAA+TGG | + | chr1_1:12277202-12277221 | None:intergenic | 45.0% | |
| GCAGTCCTTGAATGCATGAA+TGG | - | chr1_1:12277278-12277297 | Msa0008540:intron | 45.0% | |
| ACCCCTATATTTGCGATCCA+TGG | - | chr1_1:12277419-12277438 | Msa0008540:intron | 45.0% | |
| CCCATGGATCGCAAATATAG+GGG | + | chr1_1:12277423-12277442 | None:intergenic | 45.0% | |
| CCCCTATATTTGCGATCCAT+GGG | - | chr1_1:12277420-12277439 | Msa0008540:intron | 45.0% | |
| GACCCATGGATCGCAAATAT+AGG | + | chr1_1:12277425-12277444 | None:intergenic | 45.0% | |
| GTATGTGAAATGGCCCCAAA+TGG | - | chr1_1:12277944-12277963 | Msa0008540:intron | 45.0% | |
| ! | GTAAGAGGTGTACCATCTGA+TGG | + | chr1_1:12278328-12278347 | None:intergenic | 45.0% |
| GTTAAGATCTACTGTGGGTC+TGG | + | chr1_1:12278377-12278396 | None:intergenic | 45.0% | |
| ! | AGGGTTGAGGAGGTTTTCGA+GGG | + | chr1_1:12270418-12270437 | None:intergenic | 50.0% |
| ! | TAGGGTTGAGGAGGTTTTCG+AGG | + | chr1_1:12270419-12270438 | None:intergenic | 50.0% |
| !!! | ATGGGGTTTTAGGGTTGAGG+AGG | + | chr1_1:12270428-12270447 | None:intergenic | 50.0% |
| TGTGTCCCCGATAACTGAAG+TGG | - | chr1_1:12270777-12270796 | Msa0008540:intron | 50.0% | |
| GTTACGAATTGCGGTTGTCG+CGG | - | chr1_1:12270936-12270955 | Msa0008540:intron | 50.0% | |
| ACACAGGTGCCTGAAATGCA+CGG | + | chr1_1:12270983-12271002 | None:intergenic | 50.0% | |
| ACACGGTCACTCCTCGAATT+AGG | + | chr1_1:12271185-12271204 | None:intergenic | 50.0% | |
| CTTAGGGTCTGTTTGGATGG+AGG | - | chr1_1:12271283-12271302 | Msa0008540:CDS | 50.0% | |
| GTTTGGATGGAGGGTTTAGG+AGG | - | chr1_1:12271293-12271312 | Msa0008540:CDS | 50.0% | |
| TTGGATGGAGGGTTTAGGAG+GGG | - | chr1_1:12271295-12271314 | Msa0008540:CDS | 50.0% | |
| !!! | CTTGAGGTTTTAGGAGGGGA+AGG | + | chr1_1:12271503-12271522 | None:intergenic | 50.0% |
| !! | TTAAGGGTGGGTTTGGCTTG+AGG | + | chr1_1:12271519-12271538 | None:intergenic | 50.0% |
| TCAAGCCAAACCCACCCTTA+AGG | - | chr1_1:12271518-12271537 | Msa0008540:intron | 50.0% | |
| ATATCCTCACGACTCTTGCG+AGG | - | chr1_1:12271832-12271851 | Msa0008540:intron | 50.0% | |
| GTGGGATAAGAGTTTGGCTG+AGG | + | chr1_1:12272490-12272509 | None:intergenic | 50.0% | |
| ! | CAACGTTGGTGGAGAAGATC+TGG | + | chr1_1:12272548-12272567 | None:intergenic | 50.0% |
| TCTCCACCAACGTTGTTGCA+AGG | - | chr1_1:12272553-12272572 | Msa0008540:intron | 50.0% | |
| !! | CTGGATGGAAGGCACCAAAT+TGG | + | chr1_1:12272580-12272599 | None:intergenic | 50.0% |
| CAAGGAAGAACCTAGAGGGA+AGG | + | chr1_1:12272741-12272760 | None:intergenic | 50.0% | |
| GTAGCTGGGGATTTCGTTCA+AGG | + | chr1_1:12272773-12272792 | None:intergenic | 50.0% | |
| ! | TCACGACAGCTTGTTTGGAG+AGG | + | chr1_1:12272886-12272905 | None:intergenic | 50.0% |
| ! | GTTAGGTTGCTTAGTGCGCA+AGG | + | chr1_1:12273209-12273228 | None:intergenic | 50.0% |
| CAGGCAACTTCACAACTCTG+TGG | - | chr1_1:12273403-12273422 | Msa0008540:intron | 50.0% | |
| ACGGAGCTTGTGAGATAGTG+AGG | - | chr1_1:12273790-12273809 | Msa0008540:intron | 50.0% | |
| GCTTGTGAGATAGTGAGGAG+AGG | - | chr1_1:12273795-12273814 | Msa0008540:intron | 50.0% | |
| !! | ACGTTGGCTCTCAAAGTAGG+TGG | + | chr1_1:12273950-12273969 | None:intergenic | 50.0% |
| GCAAATCGATGGCCAAACGT+TGG | + | chr1_1:12273966-12273985 | None:intergenic | 50.0% | |
| GTCTGCTAATGAAGGAGTCC+AGG | - | chr1_1:12274191-12274210 | Msa0008540:intron | 50.0% | |
| !! | GACTAGATGGTGGACTGATG+TGG | + | chr1_1:12274472-12274491 | None:intergenic | 50.0% |
| GGCACCAACAACAAGCAGTA+TGG | + | chr1_1:12274505-12274524 | None:intergenic | 50.0% | |
| ! | GTGGGTTTTGCCTAGGGATT+TGG | + | chr1_1:12274622-12274641 | None:intergenic | 50.0% |
| !! | ATGGGAGTGGGTTTTGCCTA+GGG | + | chr1_1:12274628-12274647 | None:intergenic | 50.0% |
| TCTCTTTGTTACGTGCGGAG+TGG | + | chr1_1:12274680-12274699 | None:intergenic | 50.0% | |
| TGAGCACAGACAGAACAAGC+AGG | - | chr1_1:12274730-12274749 | Msa0008540:CDS | 50.0% | |
| CAGGACTCGGATTGTCAAGT+TGG | - | chr1_1:12274784-12274803 | Msa0008540:intron | 50.0% | |
| CTCCTCCAAGGAGGATATCT+TGG | - | chr1_1:12275073-12275092 | Msa0008540:CDS | 50.0% | |
| CACCAAGATATCCTCCTTGG+AGG | + | chr1_1:12275078-12275097 | None:intergenic | 50.0% | |
| GCTACTTGGCTCATCCTCTA+AGG | - | chr1_1:12275612-12275631 | Msa0008540:intron | 50.0% | |
| ! | ACTTGGCTCATCCTCTAAGG+AGG | - | chr1_1:12275615-12275634 | Msa0008540:intron | 50.0% |
| ! | CTTGGCTCATCCTCTAAGGA+GGG | - | chr1_1:12275616-12275635 | Msa0008540:intron | 50.0% |
| ! | CTCATCCTCTAAGGAGGGAT+CGG | - | chr1_1:12275621-12275640 | Msa0008540:intron | 50.0% |
| TCCGGTAAGCTTAAATCCGG+TGG | - | chr1_1:12275717-12275736 | Msa0008540:intron | 50.0% | |
| TGGCCTGTAGTTAGTAGTGC+AGG | + | chr1_1:12276576-12276595 | None:intergenic | 50.0% | |
| !! | GATTTTGGAGACCGGTTCCA+AGG | + | chr1_1:12276754-12276773 | None:intergenic | 50.0% |
| !! | TTGGGGATTGAAGAGTGCCA+CGG | + | chr1_1:12276796-12276815 | None:intergenic | 50.0% |
| GTAGCCATGGTGAGATGTGA+TGG | - | chr1_1:12276973-12276992 | Msa0008540:intron | 50.0% | |
| ! | GAACTGGTCTGGACCGTATT+TGG | + | chr1_1:12277115-12277134 | None:intergenic | 50.0% |
| GGTAGATACCACTGTACCAG+CGG | - | chr1_1:12277570-12277589 | Msa0008540:intron | 50.0% | |
| GTAGATACCACTGTACCAGC+GGG | - | chr1_1:12277571-12277590 | Msa0008540:intron | 50.0% | |
| CGCACAGAATGTACTTAGCG+TGG | - | chr1_1:12277997-12278016 | Msa0008540:intron | 50.0% | |
| ATGGTACACCTCTTACGCAG+TGG | - | chr1_1:12278332-12278351 | Msa0008540:CDS | 50.0% | |
| CTAAACTGCCACTGCGTAAG+AGG | + | chr1_1:12278343-12278362 | None:intergenic | 50.0% | |
| !! | TGTATGGGCTCAAGGTGTTG+TGG | - | chr1_1:12278409-12278428 | Msa0008540:CDS | 50.0% |
| GTCAGTGTCCCGTGCATTTC+AGG | - | chr1_1:12270971-12270990 | Msa0008540:intron | 55.0% | |
| CACAGGTGCCTGAAATGCAC+GGG | + | chr1_1:12270982-12271001 | None:intergenic | 55.0% | |
| ACCAACGGGTGTCAGACACT+GGG | - | chr1_1:12271154-12271173 | Msa0008540:intron | 55.0% | |
| ! | ACTGGGGCACTCCTAATTCG+AGG | - | chr1_1:12271171-12271190 | Msa0008540:intron | 55.0% |
| ATGGAGGGTTTAGGAGGGGA+GGG | - | chr1_1:12271299-12271318 | Msa0008540:CDS | 55.0% | |
| !!! | GTTTTAGGAGGGGAAGGGAG+GGG | + | chr1_1:12271497-12271516 | None:intergenic | 55.0% |
| !!! | GGTTTTAGGAGGGGAAGGGA+GGG | + | chr1_1:12271498-12271517 | None:intergenic | 55.0% |
| !!! | AGGTTTTAGGAGGGGAAGGG+AGG | + | chr1_1:12271499-12271518 | None:intergenic | 55.0% |
| TTGTCCTCGCAAGAGTCGTG+AGG | + | chr1_1:12271839-12271858 | None:intergenic | 55.0% | |
| GGTCCTTGCAACAACGTTGG+TGG | + | chr1_1:12272559-12272578 | None:intergenic | 55.0% | |
| GCTCTCAAAGTAGGTGGAGC+TGG | + | chr1_1:12273944-12273963 | None:intergenic | 55.0% | |
| !! | GATGGGAGTGGGTTTTGCCT+AGG | + | chr1_1:12274629-12274648 | None:intergenic | 55.0% |
| ATCCTCCTTGGAGGAGTCTC+TGG | + | chr1_1:12275069-12275088 | None:intergenic | 55.0% | |
| AGCTTCCGATCCCTCCTTAG+AGG | + | chr1_1:12275629-12275648 | None:intergenic | 55.0% | |
| ACACCTGCACAAAACACGGG+TGG | - | chr1_1:12276691-12276710 | Msa0008540:intron | 55.0% | |
| CACCTGCACAAAACACGGGT+GGG | - | chr1_1:12276692-12276711 | Msa0008540:intron | 55.0% | |
| ! | TACCCACCCGTGTTTTGTGC+AGG | + | chr1_1:12276697-12276716 | None:intergenic | 55.0% |
| GCACAAAACACGGGTGGGTA+CGG | - | chr1_1:12276697-12276716 | Msa0008540:intron | 55.0% | |
| CACAAAACACGGGTGGGTAC+GGG | - | chr1_1:12276698-12276717 | Msa0008540:intron | 55.0% | |
| ACAAAACACGGGTGGGTACG+GGG | - | chr1_1:12276699-12276718 | Msa0008540:intron | 55.0% | |
| TAGCGAGTGTTCTGCCACCT+TGG | - | chr1_1:12276734-12276753 | Msa0008540:intron | 55.0% | |
| GTGTTCTGCCACCTTGGAAC+CGG | - | chr1_1:12276740-12276759 | Msa0008540:intron | 55.0% | |
| ! | TTTGGAGACCGGTTCCAAGG+TGG | + | chr1_1:12276751-12276770 | None:intergenic | 55.0% |
| GCTAGAACAGCTGTGATCCG+TGG | - | chr1_1:12276776-12276795 | Msa0008540:intron | 55.0% | |
| GCAAGATGTGTGCAGCAGCT+GGG | + | chr1_1:12277510-12277529 | None:intergenic | 55.0% | |
| GACCAACGGGTGTCAGACAC+TGG | - | chr1_1:12271153-12271172 | Msa0008540:CDS | 60.0% | |
| CCAACGGGTGTCAGACACTG+GGG | - | chr1_1:12271155-12271174 | Msa0008540:intron | 60.0% | |
| GATGGAGGGTTTAGGAGGGG+AGG | - | chr1_1:12271298-12271317 | Msa0008540:CDS | 60.0% | |
| TGGAGGGTTTAGGAGGGGAG+GGG | - | chr1_1:12271300-12271319 | Msa0008540:CDS | 60.0% | |
| GGTTTAGGAGGGGAGGGGAA+GGG | - | chr1_1:12271305-12271324 | Msa0008540:CDS | 60.0% | |
| TACGTGCGGAGTGGCCTCTA+AGG | + | chr1_1:12274671-12274690 | None:intergenic | 60.0% | |
| GGAGTCCAGAGACTCCTCCA+AGG | - | chr1_1:12275061-12275080 | Msa0008540:CDS | 60.0% | |
| GTCCAGAGACTCCTCCAAGG+AGG | - | chr1_1:12275064-12275083 | Msa0008540:CDS | 60.0% | |
| GACGCTGCACTCACGCGTAT+CGG | + | chr1_1:12276891-12276910 | None:intergenic | 60.0% | |
| GGCAAGATGTGTGCAGCAGC+TGG | + | chr1_1:12277511-12277530 | None:intergenic | 60.0% | |
| CCCCAGTGTCTGACACCCGT+TGG | + | chr1_1:12271158-12271177 | None:intergenic | 65.0% | |
| GGGTTTAGGAGGGGAGGGGA+AGG | - | chr1_1:12271304-12271323 | Msa0008540:CDS | 65.0% | |
| TTAGGAGGGGAGGGGAAGGG+AGG | - | chr1_1:12271308-12271327 | Msa0008540:CDS | 65.0% | |
| TAGGAGGGGAGGGGAAGGGA+GGG | - | chr1_1:12271309-12271328 | Msa0008540:CDS | 65.0% | |
| TAGGAGGGGAAGGGAGGGGA+GGG | + | chr1_1:12271493-12271512 | None:intergenic | 65.0% | |
| TTAGGAGGGGAAGGGAGGGG+AGG | + | chr1_1:12271494-12271513 | None:intergenic | 65.0% | |
| !! | GCGGAGTGGCCTCTAAGGTG+TGG | + | chr1_1:12274666-12274685 | None:intergenic | 65.0% |
| GGAGGGATCGGAAGCTGCTG+CGG | - | chr1_1:12275633-12275652 | Msa0008540:intron | 65.0% | |
| TGCAGTGCCCGCTGGTACAG+TGG | + | chr1_1:12277581-12277600 | None:intergenic | 65.0% | |
| ACTACGTGTGCAGTGCCCGC+TGG | + | chr1_1:12277589-12277608 | None:intergenic | 65.0% | |
| AGGAGGGGAGGGGAAGGGAG+GGG | - | chr1_1:12271310-12271329 | Msa0008540:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_1 | gene | 12270401 | 12278513 | 12270401 | ID=Msa0008540;Name=Msa0008540 |
| chr1_1 | mRNA | 12270401 | 12278513 | 12270401 | ID=Msa0008540-mRNA-1;Parent=Msa0008540;Name=Msa0008540-mRNA-1;_AED=0.02;_eAED=0.02;_QI=69|1|1|1|1|1|19|125|663 |
| chr1_1 | exon | 12270401 | 12270628 | 12270401 | ID=Msa0008540-mRNA-1:exon:4656;Parent=Msa0008540-mRNA-1 |
| chr1_1 | exon | 12270789 | 12270910 | 12270789 | ID=Msa0008540-mRNA-1:exon:4655;Parent=Msa0008540-mRNA-1 |
| chr1_1 | exon | 12271055 | 12271172 | 12271055 | ID=Msa0008540-mRNA-1:exon:4654;Parent=Msa0008540-mRNA-1 |
| chr1_1 | exon | 12271264 | 12271343 | 12271264 | ID=Msa0008540-mRNA-1:exon:4653;Parent=Msa0008540-mRNA-1 |
| chr1_1 | exon | 12272634 | 12272716 | 12272634 | ID=Msa0008540-mRNA-1:exon:4652;Parent=Msa0008540-mRNA-1 |
| chr1_1 | exon | 12272833 | 12272899 | 12272833 | ID=Msa0008540-mRNA-1:exon:4651;Parent=Msa0008540-mRNA-1 |
| chr1_1 | exon | 12273194 | 12273321 | 12273194 | ID=Msa0008540-mRNA-1:exon:4650;Parent=Msa0008540-mRNA-1 |
| chr1_1 | exon | 12273420 | 12273543 | 12273420 | ID=Msa0008540-mRNA-1:exon:4649;Parent=Msa0008540-mRNA-1 |
| chr1_1 | exon | 12273626 | 12273688 | 12273626 | ID=Msa0008540-mRNA-1:exon:4648;Parent=Msa0008540-mRNA-1 |
| chr1_1 | exon | 12273815 | 12273883 | 12273815 | ID=Msa0008540-mRNA-1:exon:4647;Parent=Msa0008540-mRNA-1 |
| chr1_1 | exon | 12274002 | 12274127 | 12274002 | ID=Msa0008540-mRNA-1:exon:4646;Parent=Msa0008540-mRNA-1 |
| chr1_1 | exon | 12274666 | 12274773 | 12274666 | ID=Msa0008540-mRNA-1:exon:4645;Parent=Msa0008540-mRNA-1 |
| chr1_1 | exon | 12274894 | 12274969 | 12274894 | ID=Msa0008540-mRNA-1:exon:4644;Parent=Msa0008540-mRNA-1 |
| chr1_1 | exon | 12275055 | 12275146 | 12275055 | ID=Msa0008540-mRNA-1:exon:4643;Parent=Msa0008540-mRNA-1 |
| chr1_1 | exon | 12275490 | 12275564 | 12275490 | ID=Msa0008540-mRNA-1:exon:4642;Parent=Msa0008540-mRNA-1 |
| chr1_1 | exon | 12276837 | 12276948 | 12276837 | ID=Msa0008540-mRNA-1:exon:4641;Parent=Msa0008540-mRNA-1 |
| chr1_1 | exon | 12277031 | 12277188 | 12277031 | ID=Msa0008540-mRNA-1:exon:4640;Parent=Msa0008540-mRNA-1 |
| chr1_1 | exon | 12278077 | 12278195 | 12278077 | ID=Msa0008540-mRNA-1:exon:4639;Parent=Msa0008540-mRNA-1 |
| chr1_1 | exon | 12278276 | 12278513 | 12278276 | ID=Msa0008540-mRNA-1:exon:4638;Parent=Msa0008540-mRNA-1 |
| chr1_1 | five_prime_UTR | 12278445 | 12278513 | 12278445 | ID=Msa0008540-mRNA-1:five_prime_utr;Parent=Msa0008540-mRNA-1 |
| chr1_1 | CDS | 12278276 | 12278444 | 12278276 | ID=Msa0008540-mRNA-1:cds;Parent=Msa0008540-mRNA-1 |
| chr1_1 | CDS | 12278077 | 12278195 | 12278077 | ID=Msa0008540-mRNA-1:cds;Parent=Msa0008540-mRNA-1 |
| chr1_1 | CDS | 12277031 | 12277188 | 12277031 | ID=Msa0008540-mRNA-1:cds;Parent=Msa0008540-mRNA-1 |
| chr1_1 | CDS | 12276837 | 12276948 | 12276837 | ID=Msa0008540-mRNA-1:cds;Parent=Msa0008540-mRNA-1 |
| chr1_1 | CDS | 12275490 | 12275564 | 12275490 | ID=Msa0008540-mRNA-1:cds;Parent=Msa0008540-mRNA-1 |
| chr1_1 | CDS | 12275055 | 12275146 | 12275055 | ID=Msa0008540-mRNA-1:cds;Parent=Msa0008540-mRNA-1 |
| chr1_1 | CDS | 12274894 | 12274969 | 12274894 | ID=Msa0008540-mRNA-1:cds;Parent=Msa0008540-mRNA-1 |
| chr1_1 | CDS | 12274666 | 12274773 | 12274666 | ID=Msa0008540-mRNA-1:cds;Parent=Msa0008540-mRNA-1 |
| chr1_1 | CDS | 12274002 | 12274127 | 12274002 | ID=Msa0008540-mRNA-1:cds;Parent=Msa0008540-mRNA-1 |
| chr1_1 | CDS | 12273815 | 12273883 | 12273815 | ID=Msa0008540-mRNA-1:cds;Parent=Msa0008540-mRNA-1 |
| chr1_1 | CDS | 12273626 | 12273688 | 12273626 | ID=Msa0008540-mRNA-1:cds;Parent=Msa0008540-mRNA-1 |
| chr1_1 | CDS | 12273420 | 12273543 | 12273420 | ID=Msa0008540-mRNA-1:cds;Parent=Msa0008540-mRNA-1 |
| chr1_1 | CDS | 12273194 | 12273321 | 12273194 | ID=Msa0008540-mRNA-1:cds;Parent=Msa0008540-mRNA-1 |
| chr1_1 | CDS | 12272833 | 12272899 | 12272833 | ID=Msa0008540-mRNA-1:cds;Parent=Msa0008540-mRNA-1 |
| chr1_1 | CDS | 12272634 | 12272716 | 12272634 | ID=Msa0008540-mRNA-1:cds;Parent=Msa0008540-mRNA-1 |
| chr1_1 | CDS | 12271264 | 12271343 | 12271264 | ID=Msa0008540-mRNA-1:cds;Parent=Msa0008540-mRNA-1 |
| chr1_1 | CDS | 12271055 | 12271172 | 12271055 | ID=Msa0008540-mRNA-1:cds;Parent=Msa0008540-mRNA-1 |
| chr1_1 | CDS | 12270789 | 12270910 | 12270789 | ID=Msa0008540-mRNA-1:cds;Parent=Msa0008540-mRNA-1 |
| chr1_1 | CDS | 12270526 | 12270628 | 12270526 | ID=Msa0008540-mRNA-1:cds;Parent=Msa0008540-mRNA-1 |
| chr1_1 | three_prime_UTR | 12270401 | 12270525 | 12270401 | ID=Msa0008540-mRNA-1:three_prime_utr;Parent=Msa0008540-mRNA-1 |
| Gene Sequence |
| Protein sequence |
