AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0009240

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0009240 MtrunA17_Chr1g0157731 91.977 1022 49 1 1 1022 1 989 0.0 1891
Msa0009240 MtrunA17_Chr3g0139671 53.996 1026 294 32 17 1016 12 885 0.0 932
Msa0009240 MtrunA17_Chr7g0238631 64.904 208 39 2 27 234 50 223 1.73e-84 284
Msa0009240 MtrunA17_Chr5g0397841 49.189 185 58 2 37 218 53 204 1.59e-50 186
Msa0009240 MtrunA17_Chr3g0117511 44.118 136 43 1 89 224 181 283 1.12e-32 132
Msa0009240 MtrunA17_Chr3g0117511 39.583 96 57 1 39 134 183 277 6.52e-15 78.6
Msa0009240 MtrunA17_Chr4g0058991 46.324 136 40 1 89 224 207 309 1.64e-32 132
Msa0009240 MtrunA17_Chr4g0058991 37.500 96 59 1 38 133 208 302 6.06e-15 78.6
Msa0009240 MtrunA17_Chr4g0053431 40.845 142 51 1 90 231 4 112 1.74e-31 124
Msa0009240 MtrunA17_Chr4g0053431 37.374 99 61 1 39 137 5 102 2.86e-15 77.4
Msa0009240 MtrunA17_Chr5g0429661 42.647 136 45 1 89 224 120 222 3.29e-31 126
Msa0009240 MtrunA17_Chr5g0429661 37.895 95 58 1 39 133 122 215 1.62e-15 79.3
Msa0009240 MtrunA17_Chr7g0228531 42.647 136 44 2 89 224 218 319 1.20e-30 126
Msa0009240 MtrunA17_Chr7g0228531 40.625 96 55 2 39 134 220 313 6.60e-15 78.6
Msa0009240 MtrunA17_Chr5g0401731 41.429 140 49 1 90 229 14 120 2.17e-30 123
Msa0009240 MtrunA17_Chr5g0401731 36.364 99 62 1 39 137 15 112 9.20e-15 76.6
Msa0009240 MtrunA17_Chr4g0008551 36.022 186 84 3 90 274 37 188 7.70e-29 119
Msa0009240 MtrunA17_Chr4g0008551 34.211 114 74 1 24 137 23 135 7.12e-15 77.4
Msa0009240 MtrunA17_Chr7g0228481 41.667 132 43 2 89 220 218 315 2.21e-27 116
Msa0009240 MtrunA17_Chr7g0228481 32.031 128 82 4 10 134 188 313 8.95e-13 71.6
Msa0009240 MtrunA17_Chr6g0454921 38.571 140 53 1 90 229 14 120 4.62e-27 110
Msa0009240 MtrunA17_Chr6g0454921 34.737 95 61 1 39 133 15 108 2.08e-13 70.5
Msa0009240 MtrunA17_Chr5g0417621 34.483 174 73 3 90 255 133 273 6.90e-26 112
Msa0009240 MtrunA17_Chr5g0417621 31.068 103 70 1 32 134 127 228 9.07e-13 71.6
Msa0009240 MtrunA17_Chr3g0133601 36.296 135 53 1 90 224 36 137 1.13e-25 106
Msa0009240 MtrunA17_Chr3g0133601 35.354 99 63 1 39 137 37 134 2.96e-13 70.5
Msa0009240 MtrunA17_Chr5g0437321 38.235 136 51 1 86 221 14 116 2.49e-25 107
Msa0009240 MtrunA17_Chr5g0437321 35.000 100 64 1 38 137 18 116 7.78e-12 67.4
Msa0009240 MtrunA17_Chr4g0042501 39.259 135 49 1 90 224 104 205 6.99e-25 108
Msa0009240 MtrunA17_Chr4g0042501 32.692 104 69 1 31 134 97 199 1.50e-13 73.9
Msa0009240 MtrunA17_Chr7g0254261 35.714 168 70 3 58 224 59 189 6.09e-24 104
Msa0009240 MtrunA17_Chr7g0254261 32.692 104 69 1 31 134 81 183 3.04e-11 66.2
Msa0009240 MtrunA17_Chr6g0480581 36.054 147 58 2 91 234 4 117 6.31e-24 102
Msa0009240 MtrunA17_Chr6g0480581 35.052 97 62 1 38 134 3 98 1.17e-15 77.8
Msa0009240 MtrunA17_Chr7g0228401 41.270 126 40 2 102 227 290 381 7.38e-24 106
Msa0009240 MtrunA17_Chr7g0228401 38.824 85 51 1 50 134 290 373 5.63e-12 69.7
Msa0009240 MtrunA17_Chr1g0177901 40.157 127 42 2 101 227 4 96 3.10e-23 99.0
Msa0009240 MtrunA17_Chr6g0460671 35.099 151 64 2 82 231 89 206 5.69e-23 101
Msa0009240 MtrunA17_Chr6g0460671 33.981 103 67 1 32 134 92 193 3.64e-13 72.4
Msa0009240 MtrunA17_Chr5g0410961 36.029 136 53 2 91 225 14 116 6.53e-22 98.6
Msa0009240 MtrunA17_Chr5g0410961 35.000 100 63 2 39 137 14 112 7.37e-12 68.2
Msa0009240 MtrunA17_Chr3g0125801 37.313 134 51 1 91 224 16 116 6.78e-22 97.4
Msa0009240 MtrunA17_Chr3g0125801 33.663 101 66 1 34 134 11 110 5.61e-13 70.9
Msa0009240 MtrunA17_Chr7g0233061 40.288 139 45 3 90 225 179 282 7.13e-21 95.9
Msa0009240 MtrunA17_Chr7g0233061 37.000 100 60 2 34 133 175 271 3.55e-13 72.4
Msa0009240 MtrunA17_Chr6g0483051 33.146 178 113 4 40 216 17 189 1.31e-20 97.4
Msa0009240 MtrunA17_Chr6g0483051 39.062 128 76 2 41 168 71 196 9.67e-20 94.7
Msa0009240 MtrunA17_Chr2g0309911 36.620 142 54 3 88 227 10 117 1.83e-20 93.6
Msa0009240 MtrunA17_Chr8g0343831 35.971 139 55 2 88 225 7 112 2.41e-20 92.0
Msa0009240 MtrunA17_Chr3g0099131 34.307 137 56 2 89 224 41 144 2.59e-20 96.3
Msa0009240 MtrunA17_Chr2g0323411 34.247 146 59 3 89 233 12 121 2.76e-20 93.2
Msa0009240 MtrunA17_Chr2g0323411 34.000 100 64 2 39 137 14 112 9.64e-11 64.7
Msa0009240 MtrunA17_Chr5g0395281 36.691 139 52 3 89 225 12 116 6.04e-20 92.0
Msa0009240 MtrunA17_Chr5g0395281 35.000 100 63 2 39 137 14 112 1.54e-13 72.8
Msa0009240 MtrunA17_Chr1g0203411 32.624 141 61 2 91 230 14 121 1.12e-19 90.9
Msa0009240 MtrunA17_Chr1g0154031 32.418 182 87 3 89 269 76 222 1.22e-19 92.8
Msa0009240 MtrunA17_Chr1g0154031 38.542 96 57 2 39 133 78 172 1.27e-11 68.2
Msa0009240 MtrunA17_Chr2g0281071 34.752 141 58 2 86 225 10 117 1.78e-19 91.3
Msa0009240 MtrunA17_Chr2g0281071 35.000 100 63 2 39 137 15 113 4.91e-12 68.6
Msa0009240 MtrunA17_Chr7g0261281 36.232 138 54 2 89 225 12 116 2.30e-19 89.7
Msa0009240 MtrunA17_Chr7g0261281 37.000 100 61 2 39 137 14 112 1.41e-13 72.4
Msa0009240 MtrunA17_Chr6g0460661 44.048 84 47 0 91 174 16 99 2.42e-19 86.3
Msa0009240 MtrunA17_Chr6g0460661 34.906 106 64 2 29 134 10 110 8.20e-15 73.2
Msa0009240 MtrunA17_Chr1g0167691 34.058 138 57 2 89 225 12 116 3.79e-19 88.6
Msa0009240 MtrunA17_Chr1g0167691 34.000 100 64 2 39 137 14 112 7.89e-12 66.6
Msa0009240 MtrunA17_Chr3g0115821 35.971 139 53 3 89 225 12 116 4.18e-19 90.1
Msa0009240 MtrunA17_Chr3g0115821 36.000 100 62 2 39 137 14 112 1.24e-13 73.6
Msa0009240 MtrunA17_Chr4g0039971 35.971 139 53 3 89 225 13 117 4.58e-19 90.1
Msa0009240 MtrunA17_Chr4g0039971 35.000 100 63 2 39 137 15 113 1.91e-12 70.1
Msa0009240 MtrunA17_Chr4g0048511 33.333 141 60 2 86 225 10 117 1.06e-18 89.4
Msa0009240 MtrunA17_Chr4g0048511 34.000 100 64 2 39 137 15 113 5.72e-12 68.6
Msa0009240 MtrunA17_Chr1g0211161 35.664 143 56 3 85 225 9 117 1.11e-18 86.3
Msa0009240 MtrunA17_Chr1g0211161 32.407 108 71 2 39 145 15 121 1.49e-11 65.5
Msa0009240 MtrunA17_Chr8g0354661 34.307 137 56 2 89 224 37 140 2.08e-18 90.1
Msa0009240 MtrunA17_Chr8g0334881 37.037 135 50 3 91 223 12 113 2.14e-18 87.4
Msa0009240 MtrunA17_Chr4g0058631 34.507 142 59 2 85 225 8 116 2.35e-18 88.2
Msa0009240 MtrunA17_Chr4g0058631 31.818 132 88 2 39 169 14 144 3.15e-12 69.3
Msa0009240 MtrunA17_Chr2g0330041 35.714 140 54 3 91 228 14 119 2.39e-18 88.6
Msa0009240 MtrunA17_Chr7g0254411 32.394 142 62 2 91 231 14 122 2.45e-18 87.8
Msa0009240 MtrunA17_Chr7g0274581 32.609 138 59 2 89 225 12 116 2.59e-18 84.7
Msa0009240 MtrunA17_Chr7g0274581 35.849 106 66 2 39 143 14 118 1.93e-14 73.6
Msa0009240 MtrunA17_Chr4g0022901 31.214 173 85 2 89 260 13 152 2.82e-18 86.3
Msa0009240 MtrunA17_Chr4g0022901 36.000 100 62 2 39 137 15 113 3.66e-13 71.2
Msa0009240 MtrunA17_Chr4g0013361 29.756 205 89 6 89 290 10 162 3.05e-18 86.7
Msa0009240 MtrunA17_Chr7g0228231 31.206 141 63 2 86 225 11 118 3.49e-18 84.3
Msa0009240 MtrunA17_Chr5g0434831 31.159 138 61 2 89 225 7 111 3.49e-18 84.0
Msa0009240 MtrunA17_Chr5g0434831 28.788 132 88 3 34 160 4 134 1.20e-11 65.1
Msa0009240 MtrunA17_Chr7g0270891 35.971 139 55 2 88 225 11 116 3.66e-18 87.8
Msa0009240 MtrunA17_Chr7g0270891 32.407 108 71 2 39 145 14 120 1.17e-11 67.8
Msa0009240 MtrunA17_Chr8g0349261 36.429 140 52 4 89 225 13 118 3.70e-18 86.3
Msa0009240 MtrunA17_Chr8g0349261 34.951 103 60 4 39 137 15 114 2.33e-11 66.2
Msa0009240 MtrunA17_Chr3g0080861 32.394 142 62 2 89 229 37 145 3.80e-18 89.4
Msa0009240 MtrunA17_Chr8g0342541 28.090 178 89 4 91 266 14 154 4.37e-18 87.0
Msa0009240 MtrunA17_Chr8g0342541 33.000 100 65 2 35 133 10 108 1.07e-11 67.8
Msa0009240 MtrunA17_Chr1g0209661 31.159 138 61 2 88 224 26 130 4.97e-18 86.3
Msa0009240 MtrunA17_Chr1g0209661 35.417 96 60 2 39 133 29 123 1.61e-11 66.6
Msa0009240 MtrunA17_Chr1g0187761 34.286 140 56 3 89 226 12 117 5.15e-18 85.1
Msa0009240 MtrunA17_Chr1g0187761 34.259 108 65 3 39 143 14 118 1.91e-12 68.6
Msa0009240 MtrunA17_Chr1g0193371 35.000 140 55 3 88 225 11 116 5.26e-18 87.4
Msa0009240 MtrunA17_Chr3g0099141 40.000 85 50 1 89 172 40 124 5.86e-18 81.6
Msa0009240 MtrunA17_Chr1g0193801 34.532 139 57 2 88 225 11 116 7.57e-18 87.0
Msa0009240 MtrunA17_Chr1g0193801 31.481 108 72 2 39 145 14 120 1.05e-11 68.2
Msa0009240 MtrunA17_Chr8g0342481 35.461 141 54 4 91 228 14 120 7.83e-18 87.0
Msa0009240 MtrunA17_Chr8g0342481 34.000 100 63 3 36 133 11 109 7.91e-11 65.5
Msa0009240 MtrunA17_Chr8g0342521 33.562 146 58 4 91 234 14 122 7.95e-18 86.3
Msa0009240 MtrunA17_Chr8g0342521 33.000 100 65 2 35 133 10 108 4.84e-11 65.9
Msa0009240 MtrunA17_Chr4g0046181 54.237 59 27 0 83 141 213 271 9.37e-18 85.1
Msa0009240 MtrunA17_Chr3g0117091 31.100 209 95 6 85 285 8 175 9.76e-18 86.3
Msa0009240 MtrunA17_Chr3g0117091 32.143 112 74 2 35 145 10 120 4.01e-12 68.9
Msa0009240 MtrunA17_Chr7g0217221 31.618 136 59 2 91 225 14 116 1.14e-17 84.3
Msa0009240 MtrunA17_Chr4g0044421 33.824 136 56 2 91 225 14 116 1.24e-17 82.4
Msa0009240 MtrunA17_Chr1g0186061 32.877 146 62 3 81 224 12 123 1.48e-17 84.0
Msa0009240 MtrunA17_Chr1g0186061 33.981 103 66 2 36 137 19 120 5.15e-11 64.3
Msa0009240 MtrunA17_Chr4g0022931 33.094 139 59 2 89 226 13 118 2.03e-17 83.6
Msa0009240 MtrunA17_Chr4g0022931 33.333 114 74 2 39 151 15 127 1.47e-12 69.3
Msa0009240 MtrunA17_Chr5g0435101 33.088 136 57 2 91 225 13 115 2.41e-17 82.0
Msa0009240 MtrunA17_Chr8g0385321 33.333 138 58 2 91 227 14 118 2.42e-17 84.3
Msa0009240 MtrunA17_Chr8g0385321 33.654 104 67 2 35 137 10 112 5.15e-11 65.1
Msa0009240 MtrunA17_Chr6g0450101 31.206 141 63 2 86 225 11 118 3.00e-17 81.6
Msa0009240 MtrunA17_Chr4g0022911 33.577 137 57 2 89 224 13 116 3.05e-17 83.6
Msa0009240 MtrunA17_Chr4g0022911 37.000 100 61 2 39 137 15 113 1.31e-13 72.8
Msa0009240 MtrunA17_Chr4g0055981 34.074 135 55 2 91 224 57 158 3.83e-17 82.0
Msa0009240 MtrunA17_Chr4g0055981 36.937 111 67 3 29 137 46 155 2.37e-14 73.9
Msa0009240 MtrunA17_Chr1g0168661 33.088 136 55 3 91 224 23 124 3.88e-17 82.4
Msa0009240 MtrunA17_Chr1g0168661 34.000 100 64 2 39 137 23 121 1.79e-11 65.9
Msa0009240 MtrunA17_Chr3g0121241 31.884 138 60 2 89 225 42 146 3.93e-17 83.6
Msa0009240 MtrunA17_Chr5g0434841 31.884 138 60 2 89 225 20 124 4.11e-17 83.6
Msa0009240 MtrunA17_Chr4g0037141 32.353 136 58 2 91 225 14 116 4.42e-17 82.8
Msa0009240 MtrunA17_Chr1g0167661 31.884 138 60 2 89 225 12 116 4.92e-17 82.0
Msa0009240 MtrunA17_Chr1g0167661 34.951 103 59 3 39 137 14 112 1.97e-11 65.5
Msa0009240 MtrunA17_Chr8g0362231 30.534 131 58 1 94 224 25 122 5.01e-17 85.1
Msa0009240 MtrunA17_Chr8g0362231 36.957 92 57 1 42 133 25 115 1.70e-12 70.9
Msa0009240 MtrunA17_Chr5g0417821 31.884 138 60 2 89 225 7 111 6.65e-17 82.4
Msa0009240 MtrunA17_Chr4g0032401 33.333 141 60 2 86 225 14 121 6.74e-17 83.2
Msa0009240 MtrunA17_Chr8g0346561 32.609 138 59 2 89 225 12 116 7.10e-17 82.8
Msa0009240 MtrunA17_Chr8g0346561 37.000 100 61 2 39 137 14 112 2.20e-11 66.2
Msa0009240 MtrunA17_Chr3g0104501 58.333 60 25 0 82 141 124 183 7.18e-17 80.5
Msa0009240 MtrunA17_Chr2g0328771 32.639 144 63 2 89 231 20 130 8.23e-17 82.8
Msa0009240 MtrunA17_Chr4g0042671 29.670 182 85 3 89 269 12 151 1.60e-16 83.2
Msa0009240 MtrunA17_Chr4g0060721 28.777 139 65 2 89 226 13 118 1.72e-16 82.0
Msa0009240 MtrunA17_Chr5g0434911 31.159 138 61 2 91 227 23 127 1.77e-16 80.9
Msa0009240 MtrunA17_Chr5g0434911 34.286 105 67 2 34 137 18 121 4.57e-12 67.8
Msa0009240 MtrunA17_Chr3g0088461 34.532 139 57 2 88 225 21 126 2.78e-16 81.6
Msa0009240 MtrunA17_Chr7g0220341 31.429 140 60 2 91 227 27 133 3.17e-16 80.1
Msa0009240 MtrunA17_Chr7g0220341 30.159 126 83 3 39 160 27 151 9.73e-11 63.9
Msa0009240 MtrunA17_Chr2g0323351 33.094 139 57 3 89 225 12 116 3.41e-16 79.7
Msa0009240 MtrunA17_Chr2g0323351 33.962 106 68 2 39 143 14 118 1.85e-13 71.6
Msa0009240 MtrunA17_Chr3g0092401 29.371 143 67 2 91 232 15 124 4.61e-16 80.5
Msa0009240 MtrunA17_Chr8g0387421 33.824 136 56 2 91 225 14 116 6.23e-16 80.1
Msa0009240 MtrunA17_Chr5g0416341 29.008 131 60 1 94 224 29 126 6.84e-16 81.6
Msa0009240 MtrunA17_Chr5g0416341 34.821 112 72 1 42 153 29 139 4.75e-13 72.8
Msa0009240 MtrunA17_Chr3g0131121 31.884 138 60 2 91 227 14 118 7.47e-16 79.7
Msa0009240 MtrunA17_Chr3g0131121 34.314 102 65 2 37 137 12 112 3.12e-11 65.9
Msa0009240 MtrunA17_Chr2g0327821 29.371 143 65 3 84 224 1 109 1.08e-15 77.8
Msa0009240 MtrunA17_Chr2g0327821 36.000 100 62 2 39 137 8 106 3.79e-11 64.3
Msa0009240 MtrunA17_Chr1g0180391 30.935 139 60 3 89 225 19 123 1.74e-15 77.0
Msa0009240 MtrunA17_Chr1g0180391 36.066 122 70 4 21 141 9 123 2.24e-14 73.9
Msa0009240 MtrunA17_Chr7g0275911 31.159 138 61 2 89 225 12 116 1.93e-15 77.4
Msa0009240 MtrunA17_Chr7g0228891 32.374 139 58 3 89 225 12 116 1.96e-15 77.8
Msa0009240 MtrunA17_Chr4g0057031 34.307 137 54 3 91 225 14 116 2.22e-15 77.8
Msa0009240 MtrunA17_Chr6g0470971 29.609 179 80 4 82 253 7 146 3.67e-15 77.4
Msa0009240 MtrunA17_Chr6g0470971 36.000 100 62 2 39 137 16 114 2.47e-11 65.9
Msa0009240 MtrunA17_Chr3g0110351 33.813 139 56 3 89 225 12 116 4.72e-15 77.4
Msa0009240 MtrunA17_Chr1g0192411 33.333 138 58 2 88 224 11 115 4.82e-15 78.6
Msa0009240 MtrunA17_Chr1g0192411 37.864 103 58 3 34 133 9 108 2.25e-12 70.5
Msa0009240 MtrunA17_Chr7g0271241 33.083 133 53 3 88 218 11 109 5.24e-15 78.2
Msa0009240 MtrunA17_Chr3g0103281 29.412 136 62 2 91 225 14 116 5.39e-15 77.4
Msa0009240 MtrunA17_Chr3g0103281 34.000 100 64 2 39 137 14 112 4.36e-11 65.5
Msa0009240 MtrunA17_Chr7g0233161 55.357 56 25 0 86 141 294 349 5.59e-15 77.8
Msa0009240 MtrunA17_Chr6g0453211 30.000 130 57 2 91 219 14 110 5.59e-15 77.4
Msa0009240 MtrunA17_Chr6g0453471 30.435 138 62 2 89 225 12 116 5.75e-15 77.8
Msa0009240 MtrunA17_Chr6g0453471 32.075 106 70 2 39 143 14 118 7.02e-11 65.1
Msa0009240 MtrunA17_Chr5g0434571 33.813 139 56 3 89 225 48 152 6.02e-15 77.8
Msa0009240 MtrunA17_Chr7g0217741 30.435 138 62 2 89 225 12 116 6.13e-15 77.0
Msa0009240 MtrunA17_Chr1g0194301 30.147 136 59 3 91 224 35 136 6.66e-15 76.3
Msa0009240 MtrunA17_Chr5g0434931 29.730 148 66 3 85 227 27 141 6.93e-15 76.3
Msa0009240 MtrunA17_Chr5g0434931 33.333 105 68 2 34 137 32 135 7.25e-12 67.4
Msa0009240 MtrunA17_Chr2g0322521 35.507 138 53 3 89 224 29 132 8.87e-15 77.8
Msa0009240 MtrunA17_Chr4g0070611 29.710 138 63 2 89 225 12 116 1.15e-14 76.3
Msa0009240 MtrunA17_Chr1g0194291 27.624 181 78 4 91 251 23 170 1.24e-14 75.5
Msa0009240 MtrunA17_Chr1g0203441 29.677 155 75 2 87 240 11 132 1.34e-14 75.5
Msa0009240 MtrunA17_Chr1g0203441 35.965 114 69 3 31 143 9 119 3.29e-14 74.3
Msa0009240 MtrunA17_Chr5g0441131 29.630 135 60 3 91 223 11 112 1.39e-14 73.2
Msa0009240 MtrunA17_Chr5g0441131 36.364 99 62 1 37 134 9 107 1.60e-14 73.2
Msa0009240 MtrunA17_Chr2g0311221 32.331 133 56 2 88 219 13 112 1.74e-14 75.9
Msa0009240 MtrunA17_Chr2g0311221 34.343 99 63 2 39 136 16 113 5.44e-11 65.5
Msa0009240 MtrunA17_Chr4g0022881 31.852 135 56 3 91 223 14 114 1.84e-14 73.9
Msa0009240 MtrunA17_Chr4g0022881 36.449 107 56 3 37 137 12 112 5.65e-14 72.8
Msa0009240 MtrunA17_Chr4g0070641 29.710 138 63 2 89 225 12 116 2.19e-14 72.4
Msa0009240 MtrunA17_Chr5g0397231 33.846 130 52 2 91 219 14 110 2.71e-14 75.5
Msa0009240 MtrunA17_Chr7g0228991 29.710 138 63 2 91 227 31 135 2.91e-14 74.3
Msa0009240 MtrunA17_Chr4g0068061 27.778 144 70 2 89 231 12 122 2.97e-14 75.5
Msa0009240 MtrunA17_Chr5g0440781 31.852 135 57 3 91 223 14 115 3.35e-14 72.4
Msa0009240 MtrunA17_Chr5g0440781 36.364 99 62 1 37 134 12 110 1.28e-13 70.5
Msa0009240 MtrunA17_Chr4g0022891 30.719 153 70 3 91 241 14 132 3.64e-14 73.6
Msa0009240 MtrunA17_Chr4g0022891 35.294 102 60 3 39 137 14 112 5.46e-12 67.0
Msa0009240 MtrunA17_Chr5g0440761 31.852 135 57 3 91 223 14 115 3.79e-14 73.9
Msa0009240 MtrunA17_Chr5g0440761 36.364 99 62 1 37 134 12 110 8.23e-14 72.8
Msa0009240 MtrunA17_Chr5g0441141 31.852 135 57 3 91 223 14 115 4.18e-14 73.9
Msa0009240 MtrunA17_Chr5g0441141 36.364 99 62 1 37 134 12 110 6.00e-14 73.6
Msa0009240 MtrunA17_Chr4g0030881 29.577 142 59 3 91 224 9 117 4.49e-14 73.6
Msa0009240 MtrunA17_Chr5g0395221 41.558 77 44 1 89 164 12 88 4.55e-14 68.6
Msa0009240 MtrunA17_Chr3g0135311 32.847 137 57 3 91 225 14 117 5.54e-14 74.7
Msa0009240 MtrunA17_Chr4g0068921 29.927 137 62 2 88 223 23 126 6.54e-14 71.6
Msa0009240 MtrunA17_Chr2g0293911 30.657 137 61 2 88 223 23 126 1.09e-13 73.6
Msa0009240 MtrunA17_Chr8g0360111 37.647 85 52 1 91 174 27 111 1.09e-13 72.4
Msa0009240 MtrunA17_Chr1g0194951 28.369 141 67 2 89 228 12 119 1.41e-13 73.6
Msa0009240 MtrunA17_Chr1g0194951 35.577 104 65 2 39 141 14 116 5.28e-12 68.9
Msa0009240 MtrunA17_Chr5g0425591 38.750 80 47 2 91 168 11 90 9.24e-13 65.1
Msa0009240 MtrunA17_Chr7g0240821 27.485 171 85 4 93 258 5 141 9.95e-13 68.9
Msa0009240 MtrunA17_Chr7g0274481 35.644 101 63 2 40 140 8 106 1.45e-12 72.0
Msa0009240 MtrunA17_Chr8g0342531 31.618 136 82 6 80 211 2 130 1.77e-12 66.6
Msa0009240 MtrunA17_Chr7g0238651 36.905 84 50 1 94 174 10 93 3.30e-12 69.3
Msa0009240 MtrunA17_Chr4g0042611 38.462 78 45 2 89 164 12 88 3.66e-12 63.2
Msa0009240 MtrunA17_Chr2g0323321 34.066 91 59 1 86 175 8 98 4.04e-12 63.9
Msa0009240 MtrunA17_Chr8g0342461 35.052 97 59 3 91 184 14 109 6.03e-11 61.6
Msa0009240 MtrunA17_Chr5g0400821 35.644 101 62 3 39 137 14 113 7.61e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0009240 AT4G32730.5 40.432 1066 464 31 15 1012 11 973 0.0 622
Msa0009240 AT4G32730.4 40.432 1066 464 31 15 1012 11 973 0.0 622
Msa0009240 AT4G32730.3 40.432 1066 464 31 15 1012 11 973 0.0 622
Msa0009240 AT4G32730.2 40.432 1066 464 31 15 1012 11 973 0.0 622
Msa0009240 AT4G32730.1 45.013 742 284 19 15 700 11 684 1.31e-177 537
Msa0009240 AT5G11510.3 35.897 1053 513 30 20 1018 10 954 2.97e-169 521
Msa0009240 AT5G11510.1 35.897 1053 513 30 20 1018 10 954 2.97e-169 521
Msa0009240 AT5G11510.4 35.897 1053 513 30 20 1018 10 954 2.97e-169 521
Msa0009240 AT5G11510.5 38.160 739 334 19 20 724 10 659 1.41e-139 438
Msa0009240 AT5G11510.2 37.899 752 344 20 20 724 10 685 1.58e-136 431
Msa0009240 AT5G02320.3 63.107 206 42 2 29 234 6 177 5.41e-83 278
Msa0009240 AT5G02320.1 63.107 206 42 2 29 234 66 237 7.57e-83 279
Msa0009240 AT5G02320.2 63.107 206 42 2 29 234 66 237 7.57e-83 279
Msa0009240 AT3G09370.2 61.836 207 45 2 28 234 73 245 3.09e-81 274
Msa0009240 AT3G09370.1 61.836 207 45 2 28 234 68 240 3.52e-81 273
Msa0009240 AT3G09370.3 61.836 207 45 2 28 234 81 253 8.01e-81 273
Msa0009240 AT4G00540.1 46.899 258 85 6 28 268 33 255 6.67e-62 218
Msa0009240 AT4G00540.2 46.332 259 87 6 27 268 34 257 7.68e-62 216
Msa0009240 AT4G18770.1 46.897 145 44 1 81 225 207 318 1.39e-35 141
Msa0009240 AT4G18770.1 41.176 102 57 2 34 133 210 310 6.42e-17 85.1
Msa0009240 AT2G13960.2 75.362 69 16 1 29 97 31 98 3.38e-33 124
Msa0009240 AT2G13960.2 40.278 72 43 0 91 162 40 111 2.43e-12 65.1
Msa0009240 AT3G27785.1 42.647 136 45 1 89 224 187 289 9.39e-32 130
Msa0009240 AT3G27785.1 37.383 107 64 2 29 133 177 282 2.80e-16 83.2
Msa0009240 AT3G09230.1 43.885 139 45 1 90 228 54 159 2.30e-31 128
Msa0009240 AT3G09230.1 35.780 109 68 2 30 137 45 152 4.69e-14 75.9
Msa0009240 AT4G37260.1 43.165 139 46 1 86 224 8 113 7.56e-31 124
Msa0009240 AT4G37260.1 35.185 108 66 2 33 137 4 110 1.41e-13 73.6
Msa0009240 AT2G13960.1 75.362 69 16 1 29 97 66 133 1.16e-30 118
Msa0009240 AT2G13960.1 39.726 73 44 0 90 162 74 146 1.29e-11 63.9
Msa0009240 AT5G58850.1 41.176 136 47 1 89 224 103 205 1.73e-30 126
Msa0009240 AT5G58850.1 37.895 95 58 1 39 133 105 198 1.44e-14 77.8
Msa0009240 AT5G11050.1 39.706 136 49 1 89 224 103 205 1.11e-28 120
Msa0009240 AT5G11050.1 34.314 102 66 1 33 134 99 199 1.77e-13 74.3
Msa0009240 AT3G55730.1 40.559 143 52 1 90 232 55 164 2.71e-28 119
Msa0009240 AT3G55730.1 35.922 103 65 1 35 137 52 153 2.89e-12 70.5
Msa0009240 AT2G23290.1 41.481 135 46 1 90 224 12 113 4.25e-28 116
Msa0009240 AT2G23290.1 35.455 110 67 2 31 137 2 110 6.02e-13 71.6
Msa0009240 AT3G18100.1 40.252 159 85 3 25 183 483 631 1.55e-27 120
Msa0009240 AT3G18100.1 36.496 137 84 3 40 174 443 578 2.23e-21 100
Msa0009240 AT3G18100.1 39.604 101 57 2 33 133 543 639 9.92e-16 82.8
Msa0009240 AT3G18100.1 32.759 116 74 3 61 174 414 527 7.42e-11 67.0
Msa0009240 AT5G67300.1 38.849 139 52 1 90 228 5 110 1.79e-27 114
Msa0009240 AT5G67300.1 36.364 99 62 1 39 137 6 103 2.30e-14 75.5
Msa0009240 AT3G18100.3 40.252 159 85 3 25 183 435 583 2.50e-27 120
Msa0009240 AT3G18100.3 35.862 145 89 4 40 182 395 537 4.45e-21 100
Msa0009240 AT3G18100.3 39.604 101 57 2 33 133 495 591 1.60e-15 82.0
Msa0009240 AT3G18100.4 40.252 159 85 3 25 183 322 470 4.24e-27 119
Msa0009240 AT3G18100.4 36.496 137 84 3 40 174 282 417 7.88e-21 99.0
Msa0009240 AT3G18100.4 39.604 101 57 2 33 133 382 478 2.00e-15 81.6
Msa0009240 AT3G50060.1 36.242 149 62 1 90 238 5 120 5.34e-27 112
Msa0009240 AT3G50060.1 36.000 100 63 1 38 137 5 103 1.40e-14 76.3
Msa0009240 AT3G18100.2 40.252 159 85 3 25 183 270 418 6.20e-27 117
Msa0009240 AT3G18100.2 36.496 137 84 3 40 174 230 365 1.25e-20 98.2
Msa0009240 AT3G18100.2 39.604 101 57 2 33 133 330 426 3.24e-15 80.9
Msa0009240 AT5G40360.1 39.416 137 49 2 91 227 158 260 9.80e-27 113
Msa0009240 AT5G40360.1 45.263 95 51 1 39 133 158 251 2.99e-18 88.2
Msa0009240 AT4G33450.1 34.043 188 84 3 87 273 15 163 1.36e-26 110
Msa0009240 AT4G33450.1 31.250 96 65 1 39 134 19 113 1.61e-12 69.3
Msa0009240 AT5G17800.1 38.806 134 49 1 91 224 93 193 1.68e-25 108
Msa0009240 AT5G17800.1 29.358 109 76 1 26 134 80 187 2.53e-11 66.6
Msa0009240 AT1G69560.2 35.583 163 64 3 91 245 123 252 2.92e-25 108
Msa0009240 AT1G69560.2 31.959 97 65 1 38 134 122 217 3.23e-12 69.7
Msa0009240 AT1G69560.1 35.583 163 64 3 91 245 107 236 3.14e-25 108
Msa0009240 AT1G69560.1 31.959 97 65 1 38 134 106 201 3.26e-12 69.3
Msa0009240 AT1G26780.1 35.849 159 65 2 89 243 96 221 9.50e-25 105
Msa0009240 AT1G26780.1 32.292 96 64 1 39 134 98 192 2.84e-11 65.9
Msa0009240 AT3G29020.1 33.537 164 75 2 91 254 65 194 1.93e-24 103
Msa0009240 AT1G26780.2 35.849 159 65 2 89 243 96 221 2.02e-24 106
Msa0009240 AT1G26780.2 32.292 96 64 1 39 134 98 192 2.25e-11 67.4
Msa0009240 AT1G17950.1 36.567 134 52 1 91 224 5 105 3.95e-24 103
Msa0009240 AT1G17950.1 34.021 97 63 1 38 134 4 99 4.27e-14 73.9
Msa0009240 AT2G39880.1 37.037 135 52 1 90 224 49 150 5.71e-24 105
Msa0009240 AT2G39880.1 33.333 108 71 1 30 137 41 147 5.14e-12 69.3
Msa0009240 AT3G29020.2 33.537 164 75 2 91 254 67 196 7.89e-24 103
Msa0009240 AT5G06100.1 36.242 149 58 3 77 224 23 135 5.34e-23 103
Msa0009240 AT5G06100.5 36.242 149 58 3 77 224 23 135 8.92e-23 103
Msa0009240 AT5G06100.2 36.242 149 58 3 77 224 23 135 8.92e-23 103
Msa0009240 AT5G06100.3 36.242 149 58 3 77 224 23 135 8.92e-23 103
Msa0009240 AT5G06100.4 36.242 149 58 3 77 224 23 135 8.92e-23 103
Msa0009240 AT1G73410.2 36.567 134 52 1 91 224 6 106 1.31e-22 97.4
Msa0009240 AT1G73410.2 31.959 97 65 1 38 134 5 100 7.44e-11 63.2
Msa0009240 AT3G11440.2 35.766 137 54 2 89 224 41 144 6.17e-22 100
Msa0009240 AT3G11440.2 33.043 115 65 3 29 137 33 141 4.01e-11 67.0
Msa0009240 AT1G73410.1 28.634 227 122 4 91 312 6 197 7.11e-22 96.3
Msa0009240 AT3G11440.3 35.766 137 54 2 89 224 41 144 1.44e-21 100
Msa0009240 AT3G11440.3 33.043 115 65 3 29 137 33 141 5.22e-11 67.0
Msa0009240 AT3G11440.4 35.766 137 54 2 89 224 41 144 1.44e-21 100
Msa0009240 AT3G11440.4 33.043 115 65 3 29 137 33 141 5.22e-11 67.0
Msa0009240 AT3G11440.1 35.766 137 54 2 89 224 41 144 1.44e-21 100
Msa0009240 AT3G11440.1 33.043 115 65 3 29 137 33 141 5.22e-11 67.0
Msa0009240 AT2G25230.1 36.641 131 48 3 94 223 29 125 2.97e-21 94.4
Msa0009240 AT2G25230.1 35.780 109 69 1 39 147 26 133 9.97e-13 69.3
Msa0009240 AT4G28110.1 34.559 136 55 2 91 225 14 116 2.33e-20 93.2
Msa0009240 AT4G28110.1 36.634 101 60 4 39 137 14 112 5.30e-12 68.2
Msa0009240 AT5G40430.1 33.088 136 57 2 88 223 51 152 2.65e-20 92.0
Msa0009240 AT5G40430.1 39.175 97 57 2 38 134 53 147 7.00e-13 70.5
Msa0009240 AT3G13890.2 36.232 138 54 2 91 227 14 118 3.64e-20 94.0
Msa0009240 AT5G62470.1 31.690 142 64 1 91 232 14 122 5.34e-20 93.2
Msa0009240 AT3G27920.1 29.570 186 93 4 86 269 11 160 5.83e-20 90.5
Msa0009240 AT3G27920.1 33.654 104 67 2 39 141 16 118 3.59e-11 64.7
Msa0009240 AT5G16770.4 36.232 138 54 2 89 225 12 116 6.82e-20 92.4
Msa0009240 AT5G16770.4 34.000 100 64 2 39 137 14 112 1.19e-11 67.8
Msa0009240 AT5G16770.3 36.232 138 54 2 89 225 12 116 6.82e-20 92.4
Msa0009240 AT5G16770.3 34.000 100 64 2 39 137 14 112 1.19e-11 67.8
Msa0009240 AT5G16770.1 36.232 138 54 2 89 225 12 116 1.09e-19 92.0
Msa0009240 AT5G16770.1 34.000 100 64 2 39 137 14 112 1.68e-11 67.4
Msa0009240 AT5G16770.2 36.232 138 54 2 89 225 12 116 1.09e-19 92.0
Msa0009240 AT5G16770.2 34.000 100 64 2 39 137 14 112 1.68e-11 67.4
Msa0009240 AT5G54230.1 34.559 136 55 2 91 225 14 116 1.10e-19 91.7
Msa0009240 AT5G54230.1 36.000 100 62 2 39 137 14 112 7.82e-13 71.2
Msa0009240 AT5G40330.1 31.792 173 80 4 88 258 11 147 1.17e-19 89.4
Msa0009240 AT5G40330.1 32.432 111 73 2 32 141 7 116 9.46e-12 66.2
Msa0009240 AT3G23250.1 31.455 213 98 5 89 298 12 179 1.28e-19 90.9
Msa0009240 AT3G23250.1 36.000 100 62 2 39 137 14 112 2.40e-13 72.4
Msa0009240 AT5G39700.1 33.099 142 62 1 92 233 57 165 1.53e-19 88.2
Msa0009240 AT5G39700.1 31.111 135 84 2 40 174 57 182 1.12e-11 65.5
Msa0009240 AT3G48920.1 38.806 134 48 2 91 223 20 120 1.61e-19 90.1
Msa0009240 AT3G48920.1 32.456 114 75 2 29 141 10 122 1.47e-12 69.3
Msa0009240 AT3G12720.1 35.862 145 54 4 91 233 24 131 2.41e-19 90.5
Msa0009240 AT5G65230.1 36.691 139 52 3 89 225 12 116 2.60e-19 90.5
Msa0009240 AT5G65230.1 34.000 100 64 2 39 137 14 112 5.98e-12 68.6
Msa0009240 AT3G13890.1 34.694 147 53 3 91 227 14 127 3.48e-19 91.3
Msa0009240 AT3G61250.1 36.735 147 54 4 89 233 12 121 3.92e-19 89.7
Msa0009240 AT3G61250.1 34.314 102 61 3 39 137 14 112 2.27e-12 69.7
Msa0009240 AT1G56160.1 35.036 137 53 3 91 225 16 118 5.80e-19 89.4
Msa0009240 AT1G56160.1 36.275 102 59 3 39 137 16 114 1.17e-11 67.4
Msa0009240 AT4G05100.1 34.783 138 56 2 89 225 13 117 6.14e-19 89.7
Msa0009240 AT4G05100.1 35.000 100 63 2 39 137 15 113 8.59e-12 68.2
Msa0009240 AT1G18570.1 33.333 138 58 2 89 225 13 117 7.17e-19 90.1
Msa0009240 AT1G18570.1 32.407 108 71 2 39 145 15 121 9.12e-12 68.6
Msa0009240 AT5G35550.1 33.566 143 61 2 84 225 9 118 8.57e-19 87.8
Msa0009240 AT5G14750.1 32.624 141 61 2 86 225 13 120 9.21e-19 86.3
Msa0009240 AT5G14750.1 33.654 104 67 2 39 141 18 120 1.17e-11 65.5
Msa0009240 AT4G01680.3 35.971 139 55 2 88 225 11 116 1.19e-18 87.0
Msa0009240 AT4G01680.3 32.692 104 68 2 39 141 14 116 8.99e-11 63.9
Msa0009240 AT4G21440.1 31.383 188 73 4 89 256 12 163 1.25e-18 89.4
Msa0009240 AT4G21440.1 35.000 100 63 2 39 137 14 112 5.48e-12 68.9
Msa0009240 AT5G62470.2 31.469 143 64 2 91 232 14 123 1.61e-18 89.0
Msa0009240 AT3G02940.2 35.507 138 55 2 89 225 12 116 1.65e-18 88.2
Msa0009240 AT3G02940.2 34.000 100 64 2 39 137 14 112 1.35e-12 70.5
Msa0009240 AT2G47190.1 30.435 138 62 2 88 224 19 123 1.90e-18 87.0
Msa0009240 AT2G26960.1 35.766 137 52 3 89 223 20 122 2.08e-18 89.7
Msa0009240 AT3G13540.1 29.710 138 63 2 89 225 23 127 2.22e-18 86.3
Msa0009240 AT1G74080.1 32.353 170 75 4 89 251 12 148 2.28e-18 88.2
Msa0009240 AT1G74080.1 32.407 108 71 2 39 145 14 120 1.35e-11 67.8
Msa0009240 AT3G02940.1 35.507 138 55 2 89 225 12 116 2.41e-18 87.8
Msa0009240 AT3G02940.1 34.000 100 64 2 39 137 14 112 2.20e-12 70.1
Msa0009240 AT3G02940.3 35.507 138 55 2 89 225 12 116 2.41e-18 87.8
Msa0009240 AT3G02940.3 34.000 100 64 2 39 137 14 112 2.20e-12 70.1
Msa0009240 AT4G26930.1 34.559 136 55 2 89 223 19 121 2.77e-18 89.0
Msa0009240 AT4G26930.1 35.000 100 63 2 39 137 21 119 1.60e-11 67.8
Msa0009240 AT4G01680.1 35.971 139 55 2 88 225 11 116 3.05e-18 87.8
Msa0009240 AT4G01680.1 32.692 104 68 2 39 141 14 116 5.10e-11 65.9
Msa0009240 AT3G47600.1 31.126 151 63 3 91 233 14 131 3.46e-18 87.8
Msa0009240 AT3G60460.1 35.507 138 54 3 88 223 10 114 3.94e-18 86.7
Msa0009240 AT3G30210.1 27.723 202 105 4 91 290 29 191 4.18e-18 86.3
Msa0009240 AT3G30210.1 36.364 99 61 2 39 136 29 126 4.32e-12 68.6
Msa0009240 AT1G22640.1 32.609 138 59 2 91 227 14 118 4.78e-18 85.5
Msa0009240 AT1G22640.1 34.000 100 64 2 39 137 14 112 4.81e-11 65.1
Msa0009240 AT1G74650.1 33.094 139 59 2 88 225 11 116 5.79e-18 87.0
Msa0009240 AT1G74430.1 33.333 138 58 2 89 225 12 116 6.98e-18 85.5
Msa0009240 AT1G57560.1 34.286 140 56 3 88 225 11 116 9.70e-18 85.9
Msa0009240 AT3G53200.1 31.206 141 61 3 89 227 9 115 1.05e-17 84.3
Msa0009240 AT3G53200.1 36.364 99 61 2 39 136 11 108 1.63e-11 65.9
Msa0009240 AT1G57560.2 34.286 140 56 3 88 225 11 116 1.18e-17 84.7
Msa0009240 AT1G35515.1 31.618 136 59 2 91 225 14 116 1.45e-17 83.2
Msa0009240 AT2G32460.1 34.783 138 54 3 89 224 18 121 1.49e-17 87.4
Msa0009240 AT5G10280.1 33.813 139 56 3 89 225 12 116 1.51e-17 85.9
Msa0009240 AT5G10280.1 36.000 100 62 2 39 137 14 112 2.34e-13 73.2
Msa0009240 AT2G32460.2 34.783 138 54 3 89 224 6 109 1.66e-17 87.4
Msa0009240 AT1G79180.1 33.813 139 58 2 88 225 13 118 1.73e-17 84.7
Msa0009240 AT1G79180.1 35.398 113 71 2 39 150 16 127 5.01e-15 77.4
Msa0009240 AT5G59780.3 29.861 144 65 3 83 224 2 111 2.24e-17 83.2
Msa0009240 AT5G59780.3 35.000 100 63 2 39 137 10 108 6.22e-11 64.3
Msa0009240 AT4G17785.2 34.307 137 54 3 91 225 15 117 2.52e-17 85.1
Msa0009240 AT4G17785.2 33.000 100 65 2 39 137 15 113 3.89e-11 66.2
Msa0009240 AT4G17785.1 34.307 137 54 3 91 225 15 117 2.73e-17 85.5
Msa0009240 AT4G17785.1 33.000 100 65 2 39 137 15 113 4.01e-11 66.6
Msa0009240 AT2G31180.1 32.168 143 63 2 91 232 14 123 2.93e-17 83.2
Msa0009240 AT2G31180.1 32.075 106 70 2 39 143 14 118 1.36e-11 66.2
Msa0009240 AT5G55020.1 33.333 138 58 2 89 225 26 130 3.05e-17 86.7
Msa0009240 AT1G09540.1 35.000 140 55 3 88 225 11 116 3.17e-17 85.1
Msa0009240 AT5G26660.1 35.000 140 55 3 88 225 11 116 4.60e-17 84.7
Msa0009240 AT4G34990.1 33.824 136 56 2 91 225 14 116 4.77e-17 83.2
Msa0009240 AT1G34670.1 34.058 138 57 2 89 225 12 116 5.42e-17 84.3
Msa0009240 AT1G34670.1 34.000 100 64 2 39 137 14 112 7.45e-12 68.9
Msa0009240 AT1G08810.1 31.655 139 61 2 89 226 12 117 6.29e-17 82.8
Msa0009240 AT4G01680.2 33.775 151 54 3 88 225 11 128 6.39e-17 84.0
Msa0009240 AT3G12820.1 33.571 140 57 3 88 225 13 118 9.38e-17 81.3
Msa0009240 AT3G12820.1 36.111 108 63 3 39 143 16 120 1.78e-11 65.9
Msa0009240 AT3G27810.1 30.935 139 62 2 88 225 19 124 1.09e-16 80.9
Msa0009240 AT3G28910.1 30.657 137 61 2 91 226 14 117 1.24e-16 82.8
Msa0009240 AT1G06180.1 34.532 139 55 3 89 225 12 116 1.28e-16 81.3
Msa0009240 AT5G40350.1 30.935 139 62 2 88 225 16 121 1.32e-16 80.5
Msa0009240 AT5G12870.1 33.813 139 58 2 88 225 17 122 1.43e-16 81.6
Msa0009240 AT4G38620.1 30.882 136 60 2 91 225 14 116 1.69e-16 81.6
Msa0009240 AT4G38620.1 34.314 102 65 2 37 137 12 112 4.92e-11 65.5
Msa0009240 AT3G46130.1 30.882 136 58 3 91 224 11 112 1.80e-16 80.9
Msa0009240 AT3G46130.1 36.000 100 62 2 39 137 11 109 4.28e-11 65.1
Msa0009240 AT1G16490.1 33.333 138 58 2 91 227 16 120 1.94e-16 81.3
Msa0009240 AT1G16490.1 31.532 111 74 2 36 145 13 122 2.67e-11 65.9
Msa0009240 AT1G25340.1 31.111 135 59 2 91 224 20 121 2.49e-16 81.3
Msa0009240 AT5G61420.2 33.333 138 58 2 89 225 12 116 2.58e-16 82.4
Msa0009240 AT5G61420.2 36.000 100 62 2 39 137 14 112 4.71e-12 69.3
Msa0009240 AT4G09460.1 30.935 139 62 2 91 228 14 119 3.27e-16 79.7
Msa0009240 AT1G68320.1 30.435 138 62 2 88 224 18 122 4.05e-16 80.5
Msa0009240 AT4G25560.1 32.934 167 75 3 91 256 12 142 4.74e-16 80.5
Msa0009240 AT4G25560.1 33.051 118 72 3 36 152 9 120 9.33e-12 67.4
Msa0009240 AT1G18710.1 32.353 136 58 2 91 225 14 116 5.23e-16 79.7
Msa0009240 AT3G08500.1 33.571 140 59 2 87 225 28 134 7.49e-16 80.9
Msa0009240 AT1G25340.2 30.597 134 56 2 91 224 20 116 7.83e-16 79.7
Msa0009240 AT5G07690.1 33.333 138 58 2 89 225 12 116 8.23e-16 80.5
Msa0009240 AT5G07690.1 33.654 104 67 2 39 141 14 116 1.81e-11 67.4
Msa0009240 AT3G24310.1 33.094 139 57 3 91 227 20 124 8.72e-16 79.3
Msa0009240 AT1G63910.1 33.824 136 56 2 91 225 14 116 8.73e-16 80.9
Msa0009240 AT1G25340.3 30.597 134 56 2 91 224 20 116 1.16e-15 79.7
Msa0009240 AT5G60890.1 32.353 136 58 2 91 225 14 116 1.21e-15 79.3
Msa0009240 AT5G60890.1 32.407 108 71 2 39 145 14 120 9.97e-11 64.7
Msa0009240 AT2G16720.1 31.159 138 61 2 91 227 14 118 1.23e-15 79.0
Msa0009240 AT3G01140.2 31.159 138 61 2 89 225 12 116 1.52e-15 79.7
Msa0009240 AT3G01140.1 31.159 138 61 2 89 225 55 159 1.57e-15 80.5
Msa0009240 AT3G01140.1 32.075 106 70 2 39 143 57 161 9.18e-11 65.5
Msa0009240 AT3G01530.1 30.657 137 59 3 91 225 27 129 1.75e-15 77.0
Msa0009240 AT4G12350.1 33.577 137 55 3 91 225 14 116 2.16e-15 78.6
Msa0009240 AT5G07700.1 31.884 138 60 2 89 225 12 116 2.55e-15 79.0
Msa0009240 AT5G07700.1 36.000 100 62 2 39 137 14 112 9.02e-12 68.2
Msa0009240 AT5G07700.2 31.884 138 60 2 89 225 12 116 2.55e-15 79.0
Msa0009240 AT5G07700.2 36.000 100 62 2 39 137 14 112 9.02e-12 68.2
Msa0009240 AT5G15310.1 30.435 138 62 2 89 225 12 116 2.57e-15 79.0
Msa0009240 AT5G15310.1 32.075 106 70 2 39 143 14 118 6.46e-11 65.5
Msa0009240 AT4G13480.1 33.088 136 55 3 91 224 8 109 2.76e-15 77.4
Msa0009240 AT5G15310.2 30.435 138 62 2 89 225 12 116 3.50e-15 78.2
Msa0009240 AT5G15310.2 32.075 106 70 2 39 143 14 118 7.37e-11 65.1
Msa0009240 AT4G22680.1 34.307 137 54 3 91 225 14 116 4.24e-15 77.0
Msa0009240 AT1G14350.2 28.244 131 61 1 94 224 28 125 6.09e-15 79.0
Msa0009240 AT1G14350.2 33.333 108 71 1 42 149 28 134 8.25e-12 69.3
Msa0009240 AT1G14350.1 28.244 131 61 1 94 224 28 125 6.09e-15 79.0
Msa0009240 AT1G14350.1 33.333 108 71 1 42 149 28 134 8.25e-12 69.3
Msa0009240 AT1G66230.1 33.813 139 56 3 89 225 12 116 6.72e-15 77.0
Msa0009240 AT5G15310.4 30.435 138 62 2 89 225 12 116 7.06e-15 75.9
Msa0009240 AT5G16600.1 33.813 139 56 3 89 225 12 116 8.19e-15 77.4
Msa0009240 AT5G52600.1 27.011 174 93 2 91 263 14 154 8.92e-15 74.7
Msa0009240 AT5G52600.1 34.286 105 67 2 39 142 14 117 1.92e-11 65.1
Msa0009240 AT5G56110.1 28.676 136 63 2 91 225 14 116 9.07e-15 77.0
Msa0009240 AT5G56110.1 31.429 105 70 2 39 142 14 117 4.99e-11 65.9
Msa0009240 AT2G26950.1 30.882 136 52 3 89 219 16 114 1.08e-14 77.8
Msa0009240 AT1G48000.1 27.737 137 65 2 88 223 31 134 4.48e-14 73.6
Msa0009240 AT4G37780.1 31.544 149 67 3 91 237 14 129 4.63e-14 74.7
Msa0009240 AT2G02820.2 28.244 131 61 1 94 224 33 130 6.96e-14 75.9
Msa0009240 AT2G02820.2 33.929 112 73 1 42 153 33 143 1.26e-13 75.1
Msa0009240 AT2G02820.3 28.244 131 61 1 94 224 33 130 8.21e-14 74.3
Msa0009240 AT2G02820.3 33.929 112 73 1 42 153 33 143 2.94e-13 72.8
Msa0009240 AT2G02820.1 28.244 131 61 1 94 224 33 130 8.33e-14 75.5
Msa0009240 AT2G02820.1 33.929 112 73 1 42 153 33 143 1.51e-13 74.7
Msa0009240 AT1G66370.1 26.374 182 92 3 89 265 8 152 1.79e-13 72.0
Msa0009240 AT3G28470.1 30.000 130 57 2 91 219 14 110 7.59e-13 71.2
Msa0009240 AT5G49620.1 28.342 187 85 4 88 258 25 178 7.75e-13 71.2
Msa0009240 AT5G52260.1 33.088 136 55 3 91 224 14 115 1.10e-12 70.1
Msa0009240 AT1G09770.1 35.238 105 66 2 40 144 8 110 1.52e-12 72.4
Msa0009240 AT5G23000.1 34.653 101 63 3 39 137 14 113 5.92e-12 68.6
Msa0009240 AT2G37630.1 36.905 84 50 1 94 174 7 90 6.15e-12 68.9
Msa0009240 AT3G06490.1 29.197 137 63 2 88 223 18 121 1.19e-11 67.8
Msa0009240 AT3G62610.1 35.000 100 63 2 39 137 14 112 6.16e-11 65.9

Find 224 sgRNAs with CRISPR-Local

Find 410 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCTCCTATTGTTCAAGTTTC+TGG 0.080504 1_1:+13467215 None:intergenic
TCGTAGCTTCTTTCACCTTC+TGG 0.143595 1_1:+13466544 None:intergenic
ATCGAAAATCTCTTTGTTCT+TGG 0.144689 1_1:-13472303 Msa0009240:five_prime_UTR
GACAGATAAATCGGCAATTT+TGG 0.159145 1_1:-13467580 Msa0009240:CDS
GCACCTAAATGAAGTAATTT+TGG 0.189501 1_1:-13465721 None:intergenic
ATACGTGCTCATCAGATTTA+TGG 0.193392 1_1:-13469426 Msa0009240:CDS
CCAATTGAAGAATGTAGTTT+TGG 0.207934 1_1:-13468872 Msa0009240:CDS
TTGAATCCTGAACTTGTTAA+AGG 0.243792 1_1:-13470326 Msa0009240:CDS
GCCTCGTGATGAGCAATTTC+TGG 0.259231 1_1:+13468761 None:intergenic
CCTCCAAAATTACTTCATTT+AGG 0.261629 1_1:+13465718 None:intergenic
AAGCAAAACTCTGGAGCTTC+TGG 0.262077 1_1:-13467660 Msa0009240:CDS
ATCCAAGGAGATTATAATAA+AGG 0.264735 1_1:-13468416 Msa0009240:CDS
ATTGGTCTATTCTCCTCTTC+AGG 0.266647 1_1:+13468890 None:intergenic
TAAGTCCATTGATGAAATAT+TGG 0.276043 1_1:+13468652 None:intergenic
ATTGAGTACTTGTACTTCTA+TGG 0.284219 1_1:-13469193 Msa0009240:CDS
GCATCTTGAGGTACTGCTTT+AGG 0.287748 1_1:+13466439 None:intergenic
CGTAGCTTCTTTCACCTTCT+GGG 0.290807 1_1:+13466545 None:intergenic
CATCGTTTCTTTAATATTGA+TGG 0.301758 1_1:+13467810 None:intergenic
ATTGAATTGGTGAACAAATA+TGG 0.303007 1_1:-13470040 Msa0009240:CDS
GCTAGGACTATTATCGTTTC+CGG 0.304027 1_1:+13466414 None:intergenic
CACGGCCCTTTAACAAGTTC+AGG 0.320801 1_1:+13470320 None:intergenic
AGTTGCGATCTTGTACAATC+TGG 0.324091 1_1:-13467990 Msa0009240:CDS
GCACATGGAAACTACATCTA+TGG 0.334053 1_1:-13468525 Msa0009240:CDS
GCGATAGTTGACCACTTCTT+AGG 0.342138 1_1:+13470016 None:intergenic
CTCCTATTGTTCAAGTTTCT+GGG 0.342165 1_1:+13467216 None:intergenic
TAAATTGAATTCAAATGCTT+TGG 0.343755 1_1:-13466380 Msa0009240:intron
TATCAGGTGCAACAATCTTC+TGG 0.347776 1_1:-13467333 Msa0009240:intron
TTTGTAGTAGAGTTGGAATT+GGG 0.349654 1_1:-13471711 Msa0009240:five_prime_UTR
AACATTTACCTGGACGTATT+GGG 0.367354 1_1:-13469991 Msa0009240:CDS
CAACATTTACCTGGACGTAT+TGG 0.371725 1_1:-13469992 Msa0009240:CDS
TTGATCTTGCTGAACATTAG+AGG 0.371888 1_1:-13471752 Msa0009240:five_prime_UTR
TCCTCATTTATGGAATTTCC+AGG 0.375065 1_1:+13468701 None:intergenic
AATATTTCATCAATGGACTT+AGG 0.378899 1_1:-13468650 Msa0009240:CDS
GAACACTGAGGACAAGTTAA+TGG 0.379847 1_1:+13468302 None:intergenic
TACAATCTCTTTGCATCTGC+GGG 0.385639 1_1:+13468618 None:intergenic
CTTACCCAATATTTCATCAA+TGG 0.387348 1_1:-13468657 Msa0009240:CDS
AACTTTCTCAACACTATCAA+TGG 0.387842 1_1:+13471614 None:intergenic
AAACCCACTGAAGTCTGATA+TGG 0.388439 1_1:+13468560 None:intergenic
CACCTTTATTATAATCTCCT+TGG 0.389322 1_1:+13468414 None:intergenic
TATCTTCTGAGAATCCTTGC+AGG 0.393220 1_1:-13467155 Msa0009240:CDS
CATTATTTGCCTCTGAAAAC+AGG 0.393459 1_1:+13468450 None:intergenic
GGAAATCATCTCCTTGGTTC+AGG 0.394694 1_1:-13466719 Msa0009240:CDS
ATTTGTAGTAGAGTTGGAAT+TGG 0.395456 1_1:-13471712 Msa0009240:five_prime_UTR
TCAAGAACATTACATGCTAT+AGG 0.397612 1_1:+13467014 None:intergenic
CCAAAACTACATTCTTCAAT+TGG 0.400562 1_1:+13468872 None:intergenic
TACGTGCTCATCAGATTTAT+GGG 0.401491 1_1:-13469425 Msa0009240:CDS
AAGTCCATTGATGAAATATT+GGG 0.401845 1_1:+13468653 None:intergenic
AAAGCTACAGGAGATAGTTC+AGG 0.403091 1_1:-13467069 Msa0009240:CDS
TTGGATTCTTACTTGGCATC+AGG 0.404121 1_1:-13469115 Msa0009240:CDS
CATGCTTCCTTGTTTATAGC+AGG 0.405682 1_1:+13469474 None:intergenic
AATGAACTGGATGGTTAGAT+TGG 0.406431 1_1:+13468252 None:intergenic
ATTAAATAGTGTTGTTGAAG+AGG 0.408508 1_1:-13472557 Msa0009240:five_prime_UTR
GAGACAAACTGCTGATTCTC+AGG 0.413271 1_1:+13468221 None:intergenic
AAAGAAGCTACGACGCTATC+GGG 0.413664 1_1:-13466534 Msa0009240:CDS
AAGGTGGCGATCCTCATTTA+TGG 0.413733 1_1:+13468691 None:intergenic
GCAGCAAGAATTTAGTCCTC+TGG 0.418028 1_1:-13467958 Msa0009240:CDS
TCTGTGTGCACGTTTGGGTT+TGG 0.421452 1_1:+13468080 None:intergenic
TTTGAAGGGATGCTCTGGTT+TGG 0.421501 1_1:+13467180 None:intergenic
CTCCCAGAAACTTGAACAAT+AGG 0.423706 1_1:-13467218 Msa0009240:CDS
AAAGAAATTGGATTCTTACT+TGG 0.426445 1_1:-13469122 Msa0009240:CDS
AGTTGTAGTTGTAGTTGTTA+AGG 0.431533 1_1:+13472404 None:intergenic
TTGGCATAAGTGAAGTTATC+AGG 0.432515 1_1:+13468191 None:intergenic
GTAGTTGTAGTTGTTAAGGT+TGG 0.434020 1_1:+13472408 None:intergenic
AATTGCGGACAAGCTGATAA+AGG 0.435177 1_1:-13467618 Msa0009240:CDS
GTTGTAGTTGTTAAGGTTGG+TGG 0.435631 1_1:+13472411 None:intergenic
TGAATGTGGAACACCAGAAA+AGG 0.441035 1_1:-13466075 Msa0009240:CDS
ATATTTCATCAATGGACTTA+GGG 0.443994 1_1:-13468649 Msa0009240:CDS
AGTAGAGGAGACAGATAAAT+CGG 0.447415 1_1:-13467589 Msa0009240:CDS
TCGTCAATTGATACAAGATA+TGG 0.447617 1_1:+13468812 None:intergenic
AGCATCAATACAATGAGAAC+TGG 0.448633 1_1:+13468160 None:intergenic
AATGCTCTTCAGCGGATTGA+AGG 0.451223 1_1:-13468998 Msa0009240:CDS
TCAGGCTCAGCAGAATGAAC+TGG 0.451273 1_1:+13468239 None:intergenic
TTCGTTTACAACTCCTACAT+TGG 0.454849 1_1:-13465872 Msa0009240:three_prime_UTR
CCTACAAGACGTTCTACAAA+AGG 0.456902 1_1:-13471018 Msa0009240:CDS
TACAAGATATGGCTCTGAAC+AGG 0.461832 1_1:+13468823 None:intergenic
AGTGAAGTTATCAGGTGCTC+TGG 0.462608 1_1:+13468199 None:intergenic
GAAAGAAGCTACGACGCTAT+CGG 0.465234 1_1:-13466535 Msa0009240:CDS
TCATAGAAGACATCATAAAC+TGG 0.469486 1_1:+13467928 None:intergenic
GTTAATCGTGTGAAAGCTAC+AGG 0.472426 1_1:-13467081 Msa0009240:CDS
CTCTCCTTGTGTTCGTGCAA+AGG 0.473673 1_1:-13467127 Msa0009240:CDS
ATAATGATTTGTAGTAGAGT+TGG 0.474053 1_1:-13471718 Msa0009240:five_prime_UTR
TGACAGTAATTCTCCTGGTA+AGG 0.474796 1_1:-13467529 Msa0009240:CDS
AAGATGTGGCAACCATTGAT+TGG 0.476522 1_1:+13469047 None:intergenic
GTGGCAACCATTGATTGGCT+TGG 0.477767 1_1:+13469052 None:intergenic
ATGAGAACTGGATATGTCAT+TGG 0.478419 1_1:+13468172 None:intergenic
CCCAAACGTGCACACAGAAA+AGG 0.479093 1_1:-13468075 Msa0009240:CDS
TGAATCCTGAACTTGTTAAA+GGG 0.480132 1_1:-13470325 Msa0009240:CDS
TTCCAGGTTCATGTGAGTAC+TGG 0.487831 1_1:+13468717 None:intergenic
ACGAATAATTGCCTTTCCTC+AGG 0.488109 1_1:-13471646 Msa0009240:CDS
ATCCAAAACATCACCTCCTC+AGG 0.489716 1_1:+13470985 None:intergenic
TGATCTTGCTGAACATTAGA+GGG 0.490145 1_1:-13471751 Msa0009240:five_prime_UTR
GTATGACTCCGTCAAGGTTG+TGG 0.495380 1_1:-13467902 Msa0009240:CDS
CCACTTTCAGATAAAAGAAT+CGG 0.497600 1_1:-13467771 Msa0009240:CDS
GTTGCGATCTTGTACAATCT+GGG 0.499290 1_1:-13467989 Msa0009240:CDS
CAATGGTTGCCACATCTTCA+AGG 0.500041 1_1:-13469042 Msa0009240:CDS
CATGATTGACAAACAAATGC+AGG 0.503331 1_1:+13468365 None:intergenic
TTGTTTGATTGTAGATTTGG+TGG 0.503660 1_1:-13466780 Msa0009240:intron
GATTCAAAACCTTTCATGAA+AGG 0.507001 1_1:+13466753 None:intergenic
TCTATTCGTAGGAGGACTAC+TGG 0.508165 1_1:-13471042 Msa0009240:intron
TATGACTCCGTCAAGGTTGT+GGG 0.508565 1_1:-13467901 Msa0009240:CDS
GGCGAGTCCCACAACCTTGA+CGG 0.509297 1_1:+13467894 None:intergenic
GTCTGAAGCGGAGTGTTTCA+AGG 0.510634 1_1:-13470390 Msa0009240:intron
ACTTTCTCAACACTATCAAT+GGG 0.513640 1_1:+13471615 None:intergenic
CAGCAAGAATTTAGTCCTCT+GGG 0.514704 1_1:-13467957 Msa0009240:CDS
TGCCGCTGCTTAACCTTACC+AGG 0.516151 1_1:+13467516 None:intergenic
TTTCTTGACAGTAATTCTCC+TGG 0.516868 1_1:-13467534 Msa0009240:CDS
TTGAATTGGTGAACAAATAT+GGG 0.517813 1_1:-13470039 Msa0009240:CDS
AAAGTTAGAGCAGCATTACA+TGG 0.518011 1_1:-13471597 Msa0009240:CDS
CTGCATGGAAATCATCTCCT+TGG 0.519036 1_1:-13466725 Msa0009240:CDS
AACTGGATGGTTAGATTGGG+AGG 0.521376 1_1:+13468256 None:intergenic
TAATACTGAAATTAAAATTG+AGG 0.521524 1_1:-13466676 Msa0009240:intron
ATGAACTGGATGGTTAGATT+GGG 0.523786 1_1:+13468253 None:intergenic
CAGTGTTCTAATAATTTCAA+AGG 0.524218 1_1:-13468287 Msa0009240:CDS
GGTGGAACACCTTTCATGAA+AGG 0.524850 1_1:-13466762 Msa0009240:CDS
TTATATTCATCTGATCAAGT+TGG 0.525159 1_1:-13467276 Msa0009240:CDS
ATGTGTTGTCATCAGTGCCC+CGG 0.525819 1_1:-13469278 Msa0009240:intron
AAGAAAGGAATATCCAAGCT+TGG 0.527781 1_1:+13468014 None:intergenic
TTTAGCTGCTTCAACGCACA+TGG 0.528451 1_1:-13468540 Msa0009240:CDS
TGGAAATCCAAGCCAATCAA+TGG 0.528854 1_1:-13469059 Msa0009240:CDS
ATGGACACAGGAAGAGGAGT+TGG 0.530036 1_1:-13469454 Msa0009240:CDS
TCATTGCAAAAGCAAAACTC+TGG 0.532714 1_1:-13467669 Msa0009240:CDS
GGAAGCATGGACACAGGAAG+AGG 0.532770 1_1:-13469460 Msa0009240:CDS
GGATGGTTAGATTGGGAGGA+TGG 0.534721 1_1:+13468260 None:intergenic
AGATGACGTGATGATTGAAT+TGG 0.534822 1_1:-13470053 Msa0009240:CDS
CATTGATGAAATATTGGGTA+AGG 0.535623 1_1:+13468658 None:intergenic
GCAGTACCTCAAGATGCATC+CGG 0.536760 1_1:-13466433 Msa0009240:CDS
AAATCATGTCTGACCAATGT+AGG 0.536947 1_1:+13465859 None:intergenic
ACAAGATCGCAACTCAAGAA+AGG 0.539762 1_1:+13467999 None:intergenic
CTGAACTTGTTAAAGGGCCG+TGG 0.539777 1_1:-13470319 Msa0009240:CDS
TGGGTAAGGAATGTAAGTTA+AGG 0.540195 1_1:+13468672 None:intergenic
ATTGCCTTTCCTCAGGAGGA+AGG 0.541541 1_1:-13471639 Msa0009240:CDS
ACCTGGAAATTCCATAAATG+AGG 0.541868 1_1:-13468702 Msa0009240:CDS
TCAGATATCAGCATATGATC+TGG 0.542328 1_1:+13468491 None:intergenic
AATTTAGAATTGTTCGCGCT+AGG 0.542552 1_1:+13466397 None:intergenic
TGCTGTTAGAAGAATCGAAA+CGG 0.546263 1_1:+13472348 None:intergenic
GAATGTGGAACACCAGAAAA+GGG 0.546950 1_1:-13466074 Msa0009240:CDS
AAGGCTGTTCAGCGTTTCCA+AGG 0.547805 1_1:-13470848 Msa0009240:CDS
GGATTCTTCAAGAGCCCAGA+AGG 0.548325 1_1:-13466559 Msa0009240:CDS
TTGGGAAGCAATGTCGAGAA+AGG 0.549356 1_1:-13469973 Msa0009240:intron
TCTCTCTAGTCGATGGAAAG+TGG 0.549457 1_1:+13468933 None:intergenic
ATCGAAACGGAAGAAGAAGA+AGG 0.550400 1_1:+13472361 None:intergenic
GGAGATTATAATAAAGGTGT+TGG 0.550455 1_1:-13468410 Msa0009240:CDS
TCTGAACAGGATGCTTGACT+TGG 0.556679 1_1:+13468836 None:intergenic
AAGCTACAGGAGATAGTTCA+GGG 0.556917 1_1:-13467068 Msa0009240:CDS
CTACAAGACGTTCTACAAAA+GGG 0.557231 1_1:-13471017 Msa0009240:CDS
TTGTAGTAGAGTTGGAATTG+GGG 0.559397 1_1:-13471710 Msa0009240:five_prime_UTR
TTGCCTTTCCTCAGGAGGAA+GGG 0.560644 1_1:-13471638 Msa0009240:CDS
GACCAGTACTCACATGAACC+TGG 0.561601 1_1:-13468719 Msa0009240:CDS
ACTTGTACTTCTATGGAAGC+AGG 0.562301 1_1:-13469186 Msa0009240:CDS
CTTTCATAGCCGACTATCTG+AGG 0.562400 1_1:+13466037 None:intergenic
GTTCCATATCAGACTTCAGT+GGG 0.562499 1_1:-13468563 Msa0009240:CDS
CTGCTATAAACAAGGAAGCA+TGG 0.564097 1_1:-13469473 Msa0009240:CDS
AAACGTGCACACAGAAAAGG+AGG 0.564201 1_1:-13468072 Msa0009240:CDS
TTCATCAATGGACTTAGGGA+AGG 0.566574 1_1:-13468645 Msa0009240:CDS
TCGTTTCCGGATGCATCTTG+AGG 0.567500 1_1:+13466427 None:intergenic
ATCAGATTTATGGGAACAAG+TGG 0.568585 1_1:-13469416 Msa0009240:CDS
TGTTGACTTACAACCTGAAG+AGG 0.572674 1_1:-13468903 Msa0009240:CDS
CTGGTTATCTCTCTAGTCGA+TGG 0.573876 1_1:+13468926 None:intergenic
TGATAAAGGTAAACAAGTAG+AGG 0.574712 1_1:-13467604 Msa0009240:CDS
CATTGCTTCCCAATACGTCC+AGG 0.574719 1_1:+13469983 None:intergenic
ACAAGTTAATGGCAGAGTTG+AGG 0.577972 1_1:+13468313 None:intergenic
GGGCCCTTCCTCCTGAGGAA+AGG 0.578102 1_1:+13471635 None:intergenic
GGAGATGATTTCCATGCAGA+TGG 0.579035 1_1:+13466729 None:intergenic
TCCTAGTGGAATACGTGACT+TGG 0.580386 1_1:-13468591 Msa0009240:CDS
GATGACGATAAAGAAAATTG+CGG 0.582602 1_1:-13467633 Msa0009240:CDS
ACTATCGCACAACATTTACC+TGG 0.582803 1_1:-13470001 Msa0009240:CDS
ACAAATATGGGCCTAAGAAG+TGG 0.585178 1_1:-13470027 Msa0009240:CDS
TGCTCCTTTGCACGAACACA+AGG 0.585239 1_1:+13467123 None:intergenic
TTCAGGTTGTAAGTCAACAC+TGG 0.585868 1_1:+13468907 None:intergenic
AAAGTGGTGATAACAAATCT+CGG 0.586169 1_1:+13467787 None:intergenic
TAAAGGGCCGTGGTCTAAAG+AGG 0.586940 1_1:-13470309 Msa0009240:intron
TTGCAATCTGCACCTCATGT+TGG 0.587498 1_1:-13469079 Msa0009240:CDS
GTAAGGAATGTAAGTTAAGG+TGG 0.587777 1_1:+13468675 None:intergenic
TTATGCTAGCAAATTATGGA+CGG 0.588428 1_1:-13471672 Msa0009240:exon
GATCAGATGAATATAATGAA+AGG 0.590933 1_1:+13467283 None:intergenic
AATAATTGCCTTTCCTCAGG+AGG 0.592780 1_1:-13471643 Msa0009240:CDS
TGCTACATATGAAAATGCAC+AGG 0.593740 1_1:-13466482 Msa0009240:CDS
GTACAATCTCTTTGCATCTG+CGG 0.599292 1_1:+13468617 None:intergenic
ATGCATGATGATTGTGACAA+TGG 0.600677 1_1:+13465970 None:intergenic
TGGCTTGGATTTCCAACATG+AGG 0.601592 1_1:+13469067 None:intergenic
TCTGGACTATCGTCGCGAGA+TGG 0.604042 1_1:+13467873 None:intergenic
ACATTGCGACCTTGAAGATG+TGG 0.605185 1_1:+13469033 None:intergenic
GACGTTCTACAAAAGGGCAA+TGG 0.605296 1_1:-13471011 Msa0009240:CDS
AAACTTGAACAATAGGAGCT+CGG 0.606050 1_1:-13467211 Msa0009240:CDS
ATATCCAAGCTTGGAAAACG+TGG 0.606169 1_1:+13468023 None:intergenic
TCAATGGGCCCTTCCTCCTG+AGG 0.607710 1_1:+13471630 None:intergenic
GCAGCAAATCCTCAGATAGT+CGG 0.618340 1_1:-13466046 Msa0009240:CDS
ATTGTCACAATCATCATGCA+TGG 0.620151 1_1:-13465968 Msa0009240:three_prime_UTR
TCAGGATGAGACATTACGAA+AGG 0.624636 1_1:-13470867 Msa0009240:intron
ATCTTGCTGAACATTAGAGG+GGG 0.630217 1_1:-13471749 Msa0009240:five_prime_UTR
TTGCGATCTTGTACAATCTG+GGG 0.633132 1_1:-13467988 Msa0009240:CDS
CACACAGAAAAGGAGGGCAA+TGG 0.637902 1_1:-13468065 Msa0009240:CDS
ATCGGGTTGTTAAAACAAGT+CGG 0.639106 1_1:-13466517 Msa0009240:CDS
TCTTAATCCTGCTATAAACA+AGG 0.639438 1_1:-13469481 Msa0009240:CDS
GATCTTGCTGAACATTAGAG+GGG 0.640279 1_1:-13471750 Msa0009240:five_prime_UTR
TGCGATCTTGTACAATCTGG+GGG 0.647846 1_1:-13467987 Msa0009240:CDS
AAGTTAGAGCAGCATTACAT+GGG 0.648377 1_1:-13471596 Msa0009240:intron
AGGGCAATGGACTCCTGAGG+AGG 0.649519 1_1:-13470998 Msa0009240:intron
CAAGGAGAGCTAAACCTGCA+AGG 0.651202 1_1:+13467141 None:intergenic
TGTTCCATATCAGACTTCAG+TGG 0.651913 1_1:-13468564 Msa0009240:CDS
GTGCTTGACTTTAGTGAATG+TGG 0.652702 1_1:-13466089 Msa0009240:CDS
TCCAGAAATTGCTCATCACG+AGG 0.653152 1_1:-13468762 Msa0009240:CDS
AAACAAGGAAGCATGGACAC+AGG 0.654947 1_1:-13469466 Msa0009240:CDS
CTGATGTGCAATGCTTACAT+AGG 0.658329 1_1:-13470361 Msa0009240:CDS
AGAAAAGTATTCCTGAACCA+AGG 0.658915 1_1:+13466708 None:intergenic
ATGATTGACAAACAAATGCA+GGG 0.659473 1_1:+13468366 None:intergenic
ACCAAGTCACGTATTCCACT+AGG 0.661787 1_1:+13468590 None:intergenic
ATGTGCAATGCTTACATAGG+TGG 0.663886 1_1:-13470358 Msa0009240:CDS
TGAACTGTATGACTCCGTCA+AGG 0.665023 1_1:-13467908 Msa0009240:CDS
TCAGATTTATGGGAACAAGT+GGG 0.665587 1_1:-13469415 Msa0009240:CDS
GCTCAGCAGAATGAACTGGA+TGG 0.670992 1_1:+13468243 None:intergenic
AAAAGGGCAATGGACTCCTG+AGG 0.671854 1_1:-13471001 Msa0009240:CDS
AAGATGAGAATGCTCTTCAG+CGG 0.673958 1_1:-13469006 Msa0009240:CDS
ATGACTACCTCTTTAGACCA+CGG 0.677601 1_1:+13470302 None:intergenic
ACAATCTCTTTGCATCTGCG+GGG 0.680883 1_1:+13468619 None:intergenic
TCCAAGCTTGGAAAACGTGG+AGG 0.681181 1_1:+13468026 None:intergenic
AGAGATTGTACAGATCCTAG+TGG 0.685345 1_1:-13468605 Msa0009240:CDS
TAGAAGACATCATAAACTGG+CGG 0.686260 1_1:+13467931 None:intergenic
AACGTGCACACAGAAAAGGA+GGG 0.708732 1_1:-13468071 Msa0009240:CDS
TTGAAATTATTAGAACACTG+AGG 0.715065 1_1:+13468290 None:intergenic
GATTTATGGGAACAAGTGGG+CGG 0.715529 1_1:-13469412 Msa0009240:CDS
CTCCTGGTAAGGTTAAGCAG+CGG 0.725529 1_1:-13467518 Msa0009240:CDS
AGCTACAGGAGATAGTTCAG+GGG 0.726550 1_1:-13467067 Msa0009240:CDS
ATAAACTGGCGGATACCCAG+AGG 0.751585 1_1:+13467942 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! GTTAATATATTCTTAATTTT+TGG - chr1_1:13466414-13466433 Msa0009240:CDS 10.0%
!! AGAAAAAAACATAAAAATAA+AGG + chr1_1:13467443-13467462 None:intergenic 10.0%
!! TGAAAATATTATCTATAAAA+TGG + chr1_1:13468538-13468557 None:intergenic 10.0%
!!! ATAATTTGTAAAATCTTATT+AGG - chr1_1:13468815-13468834 Msa0009240:CDS 10.0%
!!! TCAATTTTTCAAATGTTTAA+CGG + chr1_1:13465730-13465749 None:intergenic 15.0%
!!! TCTTTTTTTTTTTTTTTTGC+AGG - chr1_1:13466552-13466571 Msa0009240:CDS 15.0%
!!! ATTTTTATGTTTTTTTCTTC+AGG - chr1_1:13467445-13467464 Msa0009240:intron 15.0%
!!! AGAATTATAATTGCATTTTT+AGG - chr1_1:13468455-13468474 Msa0009240:CDS 15.0%
!!! GAATTATAATTGCATTTTTA+GGG - chr1_1:13468456-13468475 Msa0009240:CDS 15.0%
!!! AATTTTGAAATATATTTGGA+GGG - chr1_1:13468770-13468789 Msa0009240:CDS 15.0%
!!! CAATTTTAATTTCAGTATTA+GGG + chr1_1:13471654-13471673 None:intergenic 15.0%
!!! TCAATTTTAATTTCAGTATT+AGG + chr1_1:13471655-13471674 None:intergenic 15.0%
!! TAATACTGAAATTAAAATTG+AGG - chr1_1:13471654-13471673 Msa0009240:CDS 15.0%
!!! AACATAAAAGTTATTTTTGT+TGG - chr1_1:13472058-13472077 Msa0009240:intron 15.0%
!!! AAACGAAAAAGCATTATTAT+AGG - chr1_1:13465850-13465869 Msa0009240:three_prime_UTR 20.0%
!!! AACGAAAAAGCATTATTATA+GGG - chr1_1:13465851-13465870 Msa0009240:three_prime_UTR 20.0%
!!! TGTTTTTGTTCAAACATAAA+TGG + chr1_1:13465899-13465918 None:intergenic 20.0%
!!! AGCTTTATAATTAAGCTATT+GGG - chr1_1:13466365-13466384 Msa0009240:intron 20.0%
!!! TCATTGTTGGAATTAAATTT+TGG - chr1_1:13466464-13466483 Msa0009240:CDS 20.0%
!!! CTAATTCTTACGATTTTTAA+TGG - chr1_1:13466829-13466848 Msa0009240:intron 20.0%
!! AAAAGTTACTGTATTGTAAT+AGG - chr1_1:13467053-13467072 Msa0009240:CDS 20.0%
!!! AGATAACTATAACTTTGAAA+TGG + chr1_1:13467102-13467121 None:intergenic 20.0%
!! AAACAAGAAGAAACTTAATA+TGG + chr1_1:13467221-13467240 None:intergenic 20.0%
!!! TTTTTTTCCAATTTTTTCCT+TGG + chr1_1:13467502-13467521 None:intergenic 20.0%
!! GGAAAAAATTGGAAAAAAAT+AGG - chr1_1:13467503-13467522 Msa0009240:CDS 20.0%
!! ACTAATCCAAATATGTTAAT+AGG - chr1_1:13468253-13468272 Msa0009240:CDS 20.0%
!!! GGTCAATTTTGAAATATATT+TGG - chr1_1:13468766-13468785 Msa0009240:CDS 20.0%
!!! CAATTTTGAAATATATTTGG+AGG - chr1_1:13468769-13468788 Msa0009240:CDS 20.0%
!! ATTTGTAAAATCTTATTAGG+TGG - chr1_1:13468818-13468837 Msa0009240:CDS 20.0%
!! TAAATTGAATTCAAATGCTT+TGG - chr1_1:13471950-13471969 Msa0009240:intron 20.0%
!! TGTAAAGATTAAATATTGCA+TGG + chr1_1:13472023-13472042 None:intergenic 20.0%
!! ATAAGATATTGTCAAAAGTA+AGG + chr1_1:13472183-13472202 None:intergenic 20.0%
!! ACAATATCTTATAGCTTAAT+GGG - chr1_1:13472191-13472210 Msa0009240:intron 20.0%
!!! TAATGGGATTTTATTTTCTT+AGG - chr1_1:13472207-13472226 Msa0009240:intron 20.0%
!! ATTAAATAGTGTTGTTGAAG+AGG - chr1_1:13465773-13465792 Msa0009240:three_prime_UTR 25.0%
!! TTTTGTTCAAACATAAATGG+CGG + chr1_1:13465896-13465915 None:intergenic 25.0%
!! TGTTTTCATCAAATTCTGTT+CGG - chr1_1:13466086-13466105 Msa0009240:CDS 25.0%
!! CAGCTTTATAATTAAGCTAT+TGG - chr1_1:13466364-13466383 Msa0009240:intron 25.0%
! CGTGTGTGATATAATTATTA+GGG - chr1_1:13466388-13466407 Msa0009240:CDS 25.0%
!! ATAATGATTTGTAGTAGAGT+TGG - chr1_1:13466612-13466631 Msa0009240:intron 25.0%
!! ACTTTTATGCTAGCAAATTA+TGG - chr1_1:13466654-13466673 Msa0009240:intron 25.0%
!! TCTTTTGAATTTGTCTAGAT+TGG - chr1_1:13466789-13466808 Msa0009240:intron 25.0%
!!! GATTAATATGTCGATTTAAG+AGG + chr1_1:13466970-13466989 None:intergenic 25.0%
!! TATAAACATGCTCTTTTCTA+AGG - chr1_1:13467029-13467048 Msa0009240:CDS 25.0%
!! ATAAACATGCTCTTTTCTAA+GGG - chr1_1:13467030-13467049 Msa0009240:CDS 25.0%
! CTCAATTACTGATATTTGAT+AGG - chr1_1:13467176-13467195 Msa0009240:CDS 25.0%
! ATCGTTAAAAATCTATTCGT+AGG - chr1_1:13467277-13467296 Msa0009240:CDS 25.0%
! GAGTAAAAATCATCATCATA+CGG + chr1_1:13467394-13467413 None:intergenic 25.0%
! AATAAAAAACTTTGTCCTGT+TGG - chr1_1:13467698-13467717 Msa0009240:CDS 25.0%
! ATAAAAAACTTTGTCCTGTT+GGG - chr1_1:13467699-13467718 Msa0009240:CDS 25.0%
!!! TAATAGCAGTTATTGGTTTA+TGG + chr1_1:13468138-13468157 None:intergenic 25.0%
!!! TAGAAAGTTGATATAATCCA+AGG + chr1_1:13468222-13468241 None:intergenic 25.0%
! CATCTTCCTATTAACATATT+TGG + chr1_1:13468262-13468281 None:intergenic 25.0%
! ATTGAATTGGTGAACAAATA+TGG - chr1_1:13468290-13468309 Msa0009240:CDS 25.0%
! TTGAATTGGTGAACAAATAT+GGG - chr1_1:13468291-13468310 Msa0009240:CDS 25.0%
! GTTAATCTAACAAGGTTATA+AGG + chr1_1:13468419-13468438 None:intergenic 25.0%
! TATAACCTTGTTAGATTAAC+TGG - chr1_1:13468419-13468438 Msa0009240:CDS 25.0%
! ATTCTCCACAAAATCTAATA+TGG + chr1_1:13468596-13468615 None:intergenic 25.0%
! TTCTATTGAGAATGAGAATA+TGG - chr1_1:13468988-13469007 Msa0009240:CDS 25.0%
! AAAGAAATTGGATTCTTACT+TGG - chr1_1:13469208-13469227 Msa0009240:CDS 25.0%
!! CAATTGAAGAATGTAGTTTT+GGG - chr1_1:13469459-13469478 Msa0009240:CDS 25.0%
! AAGTCCATTGATGAAATATT+GGG + chr1_1:13469680-13469699 None:intergenic 25.0%
! TAAGTCCATTGATGAAATAT+TGG + chr1_1:13469681-13469700 None:intergenic 25.0%
!! AATATTTCATCAATGGACTT+AGG - chr1_1:13469680-13469699 Msa0009240:intron 25.0%
!! ATATTTCATCAATGGACTTA+GGG - chr1_1:13469681-13469700 Msa0009240:intron 25.0%
!! AATGATATACGTTTTATCCA+AGG - chr1_1:13469899-13469918 Msa0009240:intron 25.0%
! ATCCAAGGAGATTATAATAA+AGG - chr1_1:13469914-13469933 Msa0009240:intron 25.0%
! TTGAAATTATTAGAACACTG+AGG + chr1_1:13470043-13470062 None:intergenic 25.0%
! CAGTGTTCTAATAATTTCAA+AGG - chr1_1:13470043-13470062 Msa0009240:CDS 25.0%
! CATCGTTTCTTTAATATTGA+TGG + chr1_1:13470523-13470542 None:intergenic 25.0%
! TTCCAAAATAGAAAAAGCTT+TGG + chr1_1:13470620-13470639 None:intergenic 25.0%
! TAACTCCAGATTACAATAAA+AGG + chr1_1:13470912-13470931 None:intergenic 25.0%
! GATCAGATGAATATAATGAA+AGG + chr1_1:13471050-13471069 None:intergenic 25.0%
! TTATATTCATCTGATCAAGT+TGG - chr1_1:13471054-13471073 Msa0009240:intron 25.0%
!! TCTCAGAAGATAATTTTGAA+GGG + chr1_1:13471167-13471186 None:intergenic 25.0%
!! TTCTCAGAAGATAATTTTGA+AGG + chr1_1:13471168-13471187 None:intergenic 25.0%
!! TAAGCAGAAAATGAATTTTC+AGG + chr1_1:13471490-13471509 None:intergenic 25.0%
!! AAATTAAAATTGAGGTGCTT+TGG - chr1_1:13471662-13471681 Msa0009240:exon 25.0%
!! AAAACAGTAAACATGTTTTC+AGG - chr1_1:13471743-13471762 Msa0009240:five_prime_UTR 25.0%
!!! TAAACATGTTTTCAGGATTT+TGG - chr1_1:13471750-13471769 Msa0009240:five_prime_UTR 25.0%
! CAATTACTATGAGTTATATG+TGG - chr1_1:13472126-13472145 Msa0009240:intron 25.0%
! GACAATATCTTATAGCTTAA+TGG - chr1_1:13472190-13472209 Msa0009240:intron 25.0%
!!! TCGATATTGAAGTTTTGAAT+CGG + chr1_1:13472578-13472597 None:intergenic 25.0%
AGTTGTAGTTGTAGTTGTTA+AGG + chr1_1:13465929-13465948 None:intergenic 30.0%
! TAACAGCACTGTTACATTTT+TGG - chr1_1:13465997-13466016 Msa0009240:three_prime_UTR 30.0%
ATCGAAAATCTCTTTGTTCT+TGG - chr1_1:13466027-13466046 Msa0009240:exon 30.0%
GCGTGTGTGATATAATTATT+AGG - chr1_1:13466387-13466406 Msa0009240:CDS 30.0%
ATTTGTAGTAGAGTTGGAAT+TGG - chr1_1:13466618-13466637 Msa0009240:intron 30.0%
TTTGTAGTAGAGTTGGAATT+GGG - chr1_1:13466619-13466638 Msa0009240:intron 30.0%
TTATGCTAGCAAATTATGGA+CGG - chr1_1:13466658-13466677 Msa0009240:intron 30.0%
ACTTTCTCAACACTATCAAT+GGG + chr1_1:13466718-13466737 None:intergenic 30.0%
AACTTTCTCAACACTATCAA+TGG + chr1_1:13466719-13466738 None:intergenic 30.0%
TTGAATTTGTCTAGATTGGA+TGG - chr1_1:13466793-13466812 Msa0009240:intron 30.0%
! TTATAGCTACAAGGCATTAT+TGG - chr1_1:13466924-13466943 Msa0009240:intron 30.0%
TAAATCTCATTCCGTTTAGA+AGG + chr1_1:13467011-13467030 None:intergenic 30.0%
TTACTGTATTGTAATAGGTG+AGG - chr1_1:13467058-13467077 Msa0009240:CDS 30.0%
! TTGTTTGAGACTTTCATGAT+GGG - chr1_1:13467235-13467254 Msa0009240:CDS 30.0%
GTTAAAAATCTATTCGTAGG+AGG - chr1_1:13467280-13467299 Msa0009240:CDS 30.0%
CATACTAGAAAATCTGAACT+TGG - chr1_1:13467413-13467432 Msa0009240:intron 30.0%
TGAGGTACATAACTTAAGAA+TGG + chr1_1:13467627-13467646 None:intergenic 30.0%
TCTTAAGTTATGTACCTCAT+TGG - chr1_1:13467628-13467647 Msa0009240:CDS 30.0%
TGGAGTTTCTTGTTACAAAT+TGG - chr1_1:13467648-13467667 Msa0009240:CDS 30.0%
ATTGGTAGACTTAATTGCAT+AGG - chr1_1:13467666-13467685 Msa0009240:CDS 30.0%
TAAAAAACTTTGTCCTGTTG+GGG - chr1_1:13467700-13467719 Msa0009240:CDS 30.0%
AGAGCATAAAACCAATCTTT+AGG - chr1_1:13467753-13467772 Msa0009240:CDS 30.0%
!!! GGTTTTTTAGACCTAAAGAT+TGG + chr1_1:13467767-13467786 None:intergenic 30.0%
!! TCGTTAGCTATTGTTTTATG+TGG - chr1_1:13467814-13467833 Msa0009240:CDS 30.0%
!! CGTTAGCTATTGTTTTATGT+GGG - chr1_1:13467815-13467834 Msa0009240:CDS 30.0%
AACTTTGTTAAAGCAGTGTT+TGG - chr1_1:13467856-13467875 Msa0009240:CDS 30.0%
!! TTGAATCCTGAACTTGTTAA+AGG - chr1_1:13468004-13468023 Msa0009240:CDS 30.0%
!! TGAATCCTGAACTTGTTAAA+GGG - chr1_1:13468005-13468024 Msa0009240:CDS 30.0%
!! CTTTAAAATGTCCTTTGACT+CGG - chr1_1:13468567-13468586 Msa0009240:CDS 30.0%
! GGTAACCATATTAGATTTTG+TGG - chr1_1:13468588-13468607 Msa0009240:CDS 30.0%
TTGAAATATATTTGGAGGGA+TGG - chr1_1:13468774-13468793 Msa0009240:CDS 30.0%
TCTTAATCCTGCTATAAACA+AGG - chr1_1:13468849-13468868 Msa0009240:CDS 30.0%
AAAAAATGTACTTACCTTCC+AGG + chr1_1:13468961-13468980 None:intergenic 30.0%
TTAAAAACTATGACCACACA+CGG + chr1_1:13469028-13469047 None:intergenic 30.0%
ATTGAGTACTTGTACTTCTA+TGG - chr1_1:13469137-13469156 Msa0009240:CDS 30.0%
ACAATGCTATTAAAAACCAC+TGG - chr1_1:13469171-13469190 Msa0009240:CDS 30.0%
CAGTTCAGTCAAAAAGAAAT+TGG - chr1_1:13469196-13469215 Msa0009240:CDS 30.0%
CCAAAACTACATTCTTCAAT+TGG + chr1_1:13469461-13469480 None:intergenic 30.0%
! CCAATTGAAGAATGTAGTTT+TGG - chr1_1:13469458-13469477 Msa0009240:CDS 30.0%
TCGTCAATTGATACAAGATA+TGG + chr1_1:13469521-13469540 None:intergenic 30.0%
CATTGATGAAATATTGGGTA+AGG + chr1_1:13469675-13469694 None:intergenic 30.0%
CTTACCCAATATTTCATCAA+TGG - chr1_1:13469673-13469692 Msa0009240:intron 30.0%
CACCTTTATTATAATCTCCT+TGG + chr1_1:13469919-13469938 None:intergenic 30.0%
! GGAGATTATAATAAAGGTGT+TGG - chr1_1:13469920-13469939 Msa0009240:intron 30.0%
ATGATTGACAAACAAATGCA+GGG + chr1_1:13469967-13469986 None:intergenic 30.0%
TCATAGAAGACATCATAAAC+TGG + chr1_1:13470405-13470424 None:intergenic 30.0%
! AAGTGCAGCTAAAACTTTTA+CGG - chr1_1:13470492-13470511 Msa0009240:intron 30.0%
AAAGTGGTGATAACAAATCT+CGG + chr1_1:13470546-13470565 None:intergenic 30.0%
CCACTTTCAGATAAAAGAAT+CGG - chr1_1:13470559-13470578 Msa0009240:intron 30.0%
!! GTCCAAAGCTTTTTCTATTT+TGG - chr1_1:13470615-13470634 Msa0009240:intron 30.0%
!! TTTTGCTTTTGCAATGAAGA+TGG + chr1_1:13470658-13470677 None:intergenic 30.0%
GATGACGATAAAGAAAATTG+CGG - chr1_1:13470697-13470716 Msa0009240:intron 30.0%
TGATAAAGGTAAACAAGTAG+AGG - chr1_1:13470726-13470745 Msa0009240:intron 30.0%
! CATCTCCTTTTATTGTAATC+TGG - chr1_1:13470904-13470923 Msa0009240:intron 30.0%
AATCTAACAGAAATGAGACA+GGG + chr1_1:13470952-13470971 None:intergenic 30.0%
TAATCTAACAGAAATGAGAC+AGG + chr1_1:13470953-13470972 None:intergenic 30.0%
GATCAAAGTAAAAATGATGG+AGG - chr1_1:13471285-13471304 Msa0009240:intron 30.0%
TCAAGAACATTACATGCTAT+AGG + chr1_1:13471319-13471338 None:intergenic 30.0%
TGCTTGTTTGATTGTAGATT+TGG - chr1_1:13471547-13471566 Msa0009240:intron 30.0%
TTGTTTGATTGTAGATTTGG+TGG - chr1_1:13471550-13471569 Msa0009240:intron 30.0%
GATTCAAAACCTTTCATGAA+AGG + chr1_1:13471580-13471599 None:intergenic 30.0%
!!! ACATGTTTACTGTTTTTAGC+AGG + chr1_1:13471739-13471758 None:intergenic 30.0%
AAATATTGCATGGAAAACGA+GGG + chr1_1:13472013-13472032 None:intergenic 30.0%
TAAATATTGCATGGAAAACG+AGG + chr1_1:13472014-13472033 None:intergenic 30.0%
AATGCTCTTGTGTTACATAT+TGG + chr1_1:13472093-13472112 None:intergenic 30.0%
CATAAATGTTCTTTGTACAG+CGG + chr1_1:13472155-13472174 None:intergenic 30.0%
!!! CGATATTGAAGTTTTGAATC+GGG + chr1_1:13472577-13472596 None:intergenic 30.0%
GTAGTTGTAGTTGTTAAGGT+TGG + chr1_1:13465925-13465944 None:intergenic 35.0%
TGCTGTTAGAAGAATCGAAA+CGG + chr1_1:13465985-13466004 None:intergenic 35.0%
TTGATCTTGCTGAACATTAG+AGG - chr1_1:13466578-13466597 Msa0009240:intron 35.0%
TGATCTTGCTGAACATTAGA+GGG - chr1_1:13466579-13466598 Msa0009240:intron 35.0%
TTGTAGTAGAGTTGGAATTG+GGG - chr1_1:13466620-13466639 Msa0009240:intron 35.0%
AAAGTTAGAGCAGCATTACA+TGG - chr1_1:13466733-13466752 Msa0009240:CDS 35.0%
AAGTTAGAGCAGCATTACAT+GGG - chr1_1:13466734-13466753 Msa0009240:CDS 35.0%
!! AGAAGAAGCGTCGATAATAA+CGG + chr1_1:13466900-13466919 None:intergenic 35.0%
CTTCTGTCTTTATAGCTACA+AGG - chr1_1:13466915-13466934 Msa0009240:intron 35.0%
AGTTGCAACTTCCTTCTAAA+CGG - chr1_1:13466997-13467016 Msa0009240:intron 35.0%
! CTTGTTTGAGACTTTCATGA+TGG - chr1_1:13467234-13467253 Msa0009240:CDS 35.0%
! TGTTTGAGACTTTCATGATG+GGG - chr1_1:13467236-13467255 Msa0009240:CDS 35.0%
CTACAAGACGTTCTACAAAA+GGG - chr1_1:13467313-13467332 Msa0009240:CDS 35.0%
AGCGTTTCCAAGGAAAAAAT+TGG - chr1_1:13467492-13467511 Msa0009240:CDS 35.0%
ATATTGCATTCAGTGGTGAT+AGG + chr1_1:13467584-13467603 None:intergenic 35.0%
GCACTTAATATTGCATTCAG+TGG + chr1_1:13467591-13467610 None:intergenic 35.0%
TGTAACAAGAAACTCCAATG+AGG + chr1_1:13467645-13467664 None:intergenic 35.0%
ACATGTTCGTATTGAGTGTT+TGG - chr1_1:13467725-13467744 Msa0009240:CDS 35.0%
AGATAGTAGAGCTACAAAAC+AGG + chr1_1:13467788-13467807 None:intergenic 35.0%
GGTAGTCATATACATTCCTT+TGG - chr1_1:13468042-13468061 Msa0009240:CDS 35.0%
!! GCAGTTATTGGTTTATGGTT+AGG + chr1_1:13468133-13468152 None:intergenic 35.0%
! GAAGCTCTAATAGCAGTTAT+TGG + chr1_1:13468145-13468164 None:intergenic 35.0%
TCAAAACAGTGTGGAAAACA+AGG + chr1_1:13468194-13468213 None:intergenic 35.0%
AGATGACGTGATGATTGAAT+TGG - chr1_1:13468277-13468296 Msa0009240:CDS 35.0%
AACATTTACCTGGACGTATT+GGG - chr1_1:13468339-13468358 Msa0009240:CDS 35.0%
ACTCTCCAGTTAATCTAACA+AGG + chr1_1:13468427-13468446 None:intergenic 35.0%
TTTCTACAAACTCGCTAACT+AGG + chr1_1:13468499-13468518 None:intergenic 35.0%
TAATATGGTTACCGAGTCAA+AGG + chr1_1:13468581-13468600 None:intergenic 35.0%
CTGTATTTATAGAGAAGCCT+AGG - chr1_1:13468677-13468696 Msa0009240:CDS 35.0%
!! TGTTTTGCAATTAGTCTGGT+AGG + chr1_1:13468724-13468743 None:intergenic 35.0%
! TGTGTGTTTTGCAATTAGTC+TGG + chr1_1:13468728-13468747 None:intergenic 35.0%
ATACGTGCTCATCAGATTTA+TGG - chr1_1:13468904-13468923 Msa0009240:CDS 35.0%
TACGTGCTCATCAGATTTAT+GGG - chr1_1:13468905-13468924 Msa0009240:CDS 35.0%
ATCAGATTTATGGGAACAAG+TGG - chr1_1:13468914-13468933 Msa0009240:CDS 35.0%
TCAGATTTATGGGAACAAGT+GGG - chr1_1:13468915-13468934 Msa0009240:CDS 35.0%
! GAATTAACGAAGTTTTTGCC+TGG - chr1_1:13468940-13468959 Msa0009240:CDS 35.0%
AGAACTCGACATGAAAAAAC+CGG + chr1_1:13469074-13469093 None:intergenic 35.0%
!!! TGAAGAATGTAGTTTTGGGA+TGG - chr1_1:13469463-13469482 Msa0009240:CDS 35.0%
ACCTGGAAATTCCATAAATG+AGG - chr1_1:13469628-13469647 Msa0009240:intron 35.0%
TCCTCATTTATGGAATTTCC+AGG + chr1_1:13469632-13469651 None:intergenic 35.0%
GTAAGGAATGTAAGTTAAGG+TGG + chr1_1:13469658-13469677 None:intergenic 35.0%
TGGGTAAGGAATGTAAGTTA+AGG + chr1_1:13469661-13469680 None:intergenic 35.0%
TCAGATATCAGCATATGATC+TGG + chr1_1:13469842-13469861 None:intergenic 35.0%
! CATTATTTGCCTCTGAAAAC+AGG + chr1_1:13469883-13469902 None:intergenic 35.0%
! GTTGGTACTGTTGAATTTTC+TGG - chr1_1:13469938-13469957 Msa0009240:intron 35.0%
CATGATTGACAAACAAATGC+AGG + chr1_1:13469968-13469987 None:intergenic 35.0%
! CGTATTCTGATTTTCGAAAC+TGG - chr1_1:13469989-13470008 Msa0009240:CDS 35.0%
! ATTCTGATTTTCGAAACTGG+TGG - chr1_1:13469992-13470011 Msa0009240:CDS 35.0%
ATGAACTGGATGGTTAGATT+GGG + chr1_1:13470080-13470099 None:intergenic 35.0%
AATGAACTGGATGGTTAGAT+TGG + chr1_1:13470081-13470100 None:intergenic 35.0%
TTGGCATAAGTGAAGTTATC+AGG + chr1_1:13470142-13470161 None:intergenic 35.0%
ATGAGAACTGGATATGTCAT+TGG + chr1_1:13470161-13470180 None:intergenic 35.0%
AGCATCAATACAATGAGAAC+TGG + chr1_1:13470173-13470192 None:intergenic 35.0%
AAGAAAGGAATATCCAAGCT+TGG + chr1_1:13470319-13470338 None:intergenic 35.0%
TAGAAGACATCATAAACTGG+CGG + chr1_1:13470402-13470421 None:intergenic 35.0%
! GCACTTTTCAATAATGCTTC+TGG + chr1_1:13470478-13470497 None:intergenic 35.0%
! AGTGCAGCTAAAACTTTTAC+GGG - chr1_1:13470493-13470512 Msa0009240:intron 35.0%
! CCGATTCTTTTATCTGAAAG+TGG + chr1_1:13470562-13470581 None:intergenic 35.0%
!! AGAAAAAGCTTTGGACAAAG+AGG + chr1_1:13470611-13470630 None:intergenic 35.0%
TCATTGCAAAAGCAAAACTC+TGG - chr1_1:13470661-13470680 Msa0009240:intron 35.0%
AGTAGAGGAGACAGATAAAT+CGG - chr1_1:13470741-13470760 Msa0009240:intron 35.0%
! GACAGATAAATCGGCAATTT+TGG - chr1_1:13470750-13470769 Msa0009240:intron 35.0%
TTTCTTGACAGTAATTCTCC+TGG - chr1_1:13470796-13470815 Msa0009240:intron 35.0%
ATCTAACAGAAATGAGACAG+GGG + chr1_1:13470951-13470970 None:intergenic 35.0%
!! GAGTTTTGTCTGAACATGAT+AGG - chr1_1:13471019-13471038 Msa0009240:CDS 35.0%
! CTCCTATTGTTCAAGTTTCT+GGG + chr1_1:13471117-13471136 None:intergenic 35.0%
AAACTTGAACAATAGGAGCT+CGG - chr1_1:13471119-13471138 Msa0009240:intron 35.0%
!! ATAATTTTGAAGGGATGCTC+TGG + chr1_1:13471158-13471177 None:intergenic 35.0%
GGGGATCAAAGTAAAAATGA+TGG - chr1_1:13471282-13471301 Msa0009240:intron 35.0%
ACACAAAGACAACAAAACTG+TGG + chr1_1:13471463-13471482 None:intergenic 35.0%
!!! ACAGTTTTGTTGTCTTTGTG+TGG - chr1_1:13471462-13471481 Msa0009240:intron 35.0%
!! AGAAAAGTATTCCTGAACCA+AGG + chr1_1:13471625-13471644 None:intergenic 35.0%
! ATCGGGTTGTTAAAACAAGT+CGG - chr1_1:13471813-13471832 Msa0009240:intron 35.0%
TGCTACATATGAAAATGCAC+AGG - chr1_1:13471848-13471867 Msa0009240:intron 35.0%
! AATTTAGAATTGTTCGCGCT+AGG + chr1_1:13471936-13471955 None:intergenic 35.0%
CTTGTGTTACATATTGGTGA+GGG + chr1_1:13472087-13472106 None:intergenic 35.0%
TCTTGTGTTACATATTGGTG+AGG + chr1_1:13472088-13472107 None:intergenic 35.0%
ATGCATGATGATTGTGACAA+TGG + chr1_1:13472363-13472382 None:intergenic 35.0%
ATTGTCACAATCATCATGCA+TGG - chr1_1:13472362-13472381 Msa0009240:five_prime_UTR 35.0%
TTCGTTTACAACTCCTACAT+TGG - chr1_1:13472458-13472477 Msa0009240:five_prime_UTR 35.0%
AAATCATGTCTGACCAATGT+AGG + chr1_1:13472474-13472493 None:intergenic 35.0%
GTTGTAGTTGTTAAGGTTGG+TGG + chr1_1:13465922-13465941 None:intergenic 40.0%
ATCGAAACGGAAGAAGAAGA+AGG + chr1_1:13465972-13465991 None:intergenic 40.0%
TGCTGTGCTTGTTTCATTGT+TGG - chr1_1:13466451-13466470 Msa0009240:CDS 40.0%
GATCTTGCTGAACATTAGAG+GGG - chr1_1:13466580-13466599 Msa0009240:intron 40.0%
ATCTTGCTGAACATTAGAGG+GGG - chr1_1:13466581-13466600 Msa0009240:intron 40.0%
ACGAATAATTGCCTTTCCTC+AGG - chr1_1:13466684-13466703 Msa0009240:CDS 40.0%
AATAATTGCCTTTCCTCAGG+AGG - chr1_1:13466687-13466706 Msa0009240:CDS 40.0%
! AGCTACAAGGCATTATTGGT+TGG - chr1_1:13466928-13466947 Msa0009240:intron 40.0%
GCATCAGCGATTCAATGAAA+TGG + chr1_1:13467157-13467176 None:intergenic 40.0%
TGATAGGTGTGAGTTGTAGT+AGG - chr1_1:13467192-13467211 Msa0009240:CDS 40.0%
! AGACTTTCATGATGGGGTTA+AGG - chr1_1:13467242-13467261 Msa0009240:CDS 40.0%
! CCTTTTGTAGAACGTCTTGT+AGG + chr1_1:13467315-13467334 None:intergenic 40.0%
CCTACAAGACGTTCTACAAA+AGG - chr1_1:13467312-13467331 Msa0009240:CDS 40.0%
TCAGGATGAGACATTACGAA+AGG - chr1_1:13467463-13467482 Msa0009240:intron 40.0%
CTACTTATGTGTGTCTGAAG+CGG - chr1_1:13467928-13467947 Msa0009240:CDS 40.0%
CTGATGTGCAATGCTTACAT+AGG - chr1_1:13467969-13467988 Msa0009240:CDS 40.0%
ATGTGCAATGCTTACATAGG+TGG - chr1_1:13467972-13467991 Msa0009240:CDS 40.0%
ATGACTACCTCTTTAGACCA+CGG + chr1_1:13468031-13468050 None:intergenic 40.0%
TCAGAAAAACGCAAGACCAA+AGG + chr1_1:13468061-13468080 None:intergenic 40.0%
TTCTTTGAGCATGTGAGCTA+TGG - chr1_1:13468162-13468181 Msa0009240:CDS 40.0%
AAGGCAACATCAAAACAGTG+TGG + chr1_1:13468203-13468222 None:intergenic 40.0%
!!! ACACTGTTTTGATGTTGCCT+TGG - chr1_1:13468202-13468221 Msa0009240:CDS 40.0%
ACAAATATGGGCCTAAGAAG+TGG - chr1_1:13468303-13468322 Msa0009240:CDS 40.0%
ACTATCGCACAACATTTACC+TGG - chr1_1:13468329-13468348 Msa0009240:CDS 40.0%
CAACATTTACCTGGACGTAT+TGG - chr1_1:13468338-13468357 Msa0009240:CDS 40.0%
AAGCAATGTCGAGAAAGGTA+TGG - chr1_1:13468362-13468381 Msa0009240:CDS 40.0%
TCATGAGATACTCGCTAACT+AGG + chr1_1:13468388-13468407 None:intergenic 40.0%
AACTCGCTAACTAGGCTATA+AGG + chr1_1:13468491-13468510 None:intergenic 40.0%
! CATGCTTCCTTGTTTATAGC+AGG + chr1_1:13468859-13468878 None:intergenic 40.0%
CTGCTATAAACAAGGAAGCA+TGG - chr1_1:13468857-13468876 Msa0009240:CDS 40.0%
! TAACGAAGTTTTTGCCTGGA+AGG - chr1_1:13468944-13468963 Msa0009240:CDS 40.0%
AACTCGACATGAAAAAACCG+GGG + chr1_1:13469072-13469091 None:intergenic 40.0%
GAACTCGACATGAAAAAACC+GGG + chr1_1:13469073-13469092 None:intergenic 40.0%
ACTTGTACTTCTATGGAAGC+AGG - chr1_1:13469144-13469163 Msa0009240:CDS 40.0%
!! TTTTGACTGAACTGTTCCAG+TGG + chr1_1:13469190-13469209 None:intergenic 40.0%
TTGGATTCTTACTTGGCATC+AGG - chr1_1:13469215-13469234 Msa0009240:CDS 40.0%
TGGAAATCCAAGCCAATCAA+TGG - chr1_1:13469271-13469290 Msa0009240:intron 40.0%
AAGATGTGGCAACCATTGAT+TGG + chr1_1:13469286-13469305 None:intergenic 40.0%
AAGATGAGAATGCTCTTCAG+CGG - chr1_1:13469324-13469343 Msa0009240:intron 40.0%
!! TTCAGGTTGTAAGTCAACAC+TGG + chr1_1:13469426-13469445 None:intergenic 40.0%
!! TGTTGACTTACAACCTGAAG+AGG - chr1_1:13469427-13469446 Msa0009240:CDS 40.0%
! ATTGGTCTATTCTCCTCTTC+AGG + chr1_1:13469443-13469462 None:intergenic 40.0%
!! TACAAGATATGGCTCTGAAC+AGG + chr1_1:13469510-13469529 None:intergenic 40.0%
! TTCATCAATGGACTTAGGGA+AGG - chr1_1:13469685-13469704 Msa0009240:intron 40.0%
AGAGATTGTACAGATCCTAG+TGG - chr1_1:13469725-13469744 Msa0009240:intron 40.0%
TGTTCCATATCAGACTTCAG+TGG - chr1_1:13469766-13469785 Msa0009240:intron 40.0%
GTTCCATATCAGACTTCAGT+GGG - chr1_1:13469767-13469786 Msa0009240:intron 40.0%
AAACCCACTGAAGTCTGATA+TGG + chr1_1:13469773-13469792 None:intergenic 40.0%
GCACATGGAAACTACATCTA+TGG - chr1_1:13469805-13469824 Msa0009240:intron 40.0%
ACAAGTTAATGGCAGAGTTG+AGG + chr1_1:13470020-13470039 None:intergenic 40.0%
GAACACTGAGGACAAGTTAA+TGG + chr1_1:13470031-13470050 None:intergenic 40.0%
! GGGTTTGGATTTTCATCTGT+TGG + chr1_1:13470238-13470257 None:intergenic 40.0%
ATATCCAAGCTTGGAAAACG+TGG + chr1_1:13470310-13470329 None:intergenic 40.0%
ACAAGATCGCAACTCAAGAA+AGG + chr1_1:13470334-13470353 None:intergenic 40.0%
AGTTGCGATCTTGTACAATC+TGG - chr1_1:13470340-13470359 Msa0009240:CDS 40.0%
GTTGCGATCTTGTACAATCT+GGG - chr1_1:13470341-13470360 Msa0009240:CDS 40.0%
TTGCGATCTTGTACAATCTG+GGG - chr1_1:13470342-13470361 Msa0009240:CDS 40.0%
CAGCAAGAATTTAGTCCTCT+GGG - chr1_1:13470373-13470392 Msa0009240:CDS 40.0%
AATTGCGGACAAGCTGATAA+AGG - chr1_1:13470712-13470731 Msa0009240:intron 40.0%
TGACAGTAATTCTCCTGGTA+AGG - chr1_1:13470801-13470820 Msa0009240:intron 40.0%
! CTCCTTTTGTCGTGTTTATC+AGG - chr1_1:13470981-13471000 Msa0009240:intron 40.0%
CACCTGATAAACACGACAAA+AGG + chr1_1:13470986-13471005 None:intergenic 40.0%
TATCAGGTGCAACAATCTTC+TGG - chr1_1:13470997-13471016 Msa0009240:intron 40.0%
!!! GGTTTTAGAGACAGAGTTGT+AGG - chr1_1:13471075-13471094 Msa0009240:intron 40.0%
CTCCCAGAAACTTGAACAAT+AGG - chr1_1:13471112-13471131 Msa0009240:intron 40.0%
! GCTCCTATTGTTCAAGTTTC+TGG + chr1_1:13471118-13471137 None:intergenic 40.0%
! TATCTTCTGAGAATCCTTGC+AGG - chr1_1:13471175-13471194 Msa0009240:intron 40.0%
GTTAATCGTGTGAAAGCTAC+AGG - chr1_1:13471249-13471268 Msa0009240:intron 40.0%
AAAGCTACAGGAGATAGTTC+AGG - chr1_1:13471261-13471280 Msa0009240:intron 40.0%
AAGCTACAGGAGATAGTTCA+GGG - chr1_1:13471262-13471281 Msa0009240:intron 40.0%
CAAAGACAACAAAACTGTGG+AGG + chr1_1:13471460-13471479 None:intergenic 40.0%
!! GTTTTGAATCACCATCTGCA+TGG - chr1_1:13471590-13471609 Msa0009240:intron 40.0%
GCTAGGACTATTATCGTTTC+CGG + chr1_1:13471919-13471938 None:intergenic 40.0%
GTGCTTGACTTTAGTGAATG+TGG - chr1_1:13472241-13472260 Msa0009240:intron 40.0%
TGAATGTGGAACACCAGAAA+AGG - chr1_1:13472255-13472274 Msa0009240:five_prime_UTR 40.0%
GAATGTGGAACACCAGAAAA+GGG - chr1_1:13472256-13472275 Msa0009240:five_prime_UTR 40.0%
TCTATTCGTAGGAGGACTAC+TGG - chr1_1:13467288-13467307 Msa0009240:CDS 45.0%
GACGTTCTACAAAAGGGCAA+TGG - chr1_1:13467319-13467338 Msa0009240:CDS 45.0%
ATCCAAAACATCACCTCCTC+AGG + chr1_1:13467348-13467367 None:intergenic 45.0%
GCGATAGTTGACCACTTCTT+AGG + chr1_1:13468317-13468336 None:intergenic 45.0%
TTGGGAAGCAATGTCGAGAA+AGG - chr1_1:13468357-13468376 Msa0009240:CDS 45.0%
!! AGCCTAGGACTAGCTAACTA+AGG - chr1_1:13468692-13468711 Msa0009240:CDS 45.0%
!! GCCTAGGACTAGCTAACTAA+GGG - chr1_1:13468693-13468712 Msa0009240:CDS 45.0%
TCCCTTAGTTAGCTAGTCCT+AGG + chr1_1:13468697-13468716 None:intergenic 45.0%
! AAACAAGGAAGCATGGACAC+AGG - chr1_1:13468864-13468883 Msa0009240:CDS 45.0%
GATTTATGGGAACAAGTGGG+CGG - chr1_1:13468918-13468937 Msa0009240:CDS 45.0%
AACTATGACCACACACGGAA+GGG + chr1_1:13469023-13469042 None:intergenic 45.0%
AAACTATGACCACACACGGA+AGG + chr1_1:13469024-13469043 None:intergenic 45.0%
TTGCAATCTGCACCTCATGT+TGG - chr1_1:13469251-13469270 Msa0009240:CDS 45.0%
! TGGCTTGGATTTCCAACATG+AGG + chr1_1:13469266-13469285 None:intergenic 45.0%
CAATGGTTGCCACATCTTCA+AGG - chr1_1:13469288-13469307 Msa0009240:intron 45.0%
ACATTGCGACCTTGAAGATG+TGG + chr1_1:13469300-13469319 None:intergenic 45.0%
!! AATGCTCTTCAGCGGATTGA+AGG - chr1_1:13469332-13469351 Msa0009240:intron 45.0%
TCTCTCTAGTCGATGGAAAG+TGG + chr1_1:13469400-13469419 None:intergenic 45.0%
CTGGTTATCTCTCTAGTCGA+TGG + chr1_1:13469407-13469426 None:intergenic 45.0%
TCTGAACAGGATGCTTGACT+TGG + chr1_1:13469497-13469516 None:intergenic 45.0%
TCCAGAAATTGCTCATCACG+AGG - chr1_1:13469568-13469587 Msa0009240:intron 45.0%
TTCCAGGTTCATGTGAGTAC+TGG + chr1_1:13469616-13469635 None:intergenic 45.0%
AAGGTGGCGATCCTCATTTA+TGG + chr1_1:13469642-13469661 None:intergenic 45.0%
TCCTAGTGGAATACGTGACT+TGG - chr1_1:13469739-13469758 Msa0009240:intron 45.0%
ACCAAGTCACGTATTCCACT+AGG + chr1_1:13469743-13469762 None:intergenic 45.0%
TTTAGCTGCTTCAACGCACA+TGG - chr1_1:13469790-13469809 Msa0009240:intron 45.0%
! TTGCAGAGTCCTGTTTTCAG+AGG - chr1_1:13469871-13469890 Msa0009240:intron 45.0%
AACTGGATGGTTAGATTGGG+AGG + chr1_1:13470077-13470096 None:intergenic 45.0%
!! GAGACAAACTGCTGATTCTC+AGG + chr1_1:13470112-13470131 None:intergenic 45.0%
AGTGAAGTTATCAGGTGCTC+TGG + chr1_1:13470134-13470153 None:intergenic 45.0%
! CCTTTTCTGTGTGCACGTTT+GGG + chr1_1:13470258-13470277 None:intergenic 45.0%
! TCCTTTTCTGTGTGCACGTT+TGG + chr1_1:13470259-13470278 None:intergenic 45.0%
AAACGTGCACACAGAAAAGG+AGG - chr1_1:13470258-13470277 Msa0009240:intron 45.0%
AACGTGCACACAGAAAAGGA+GGG - chr1_1:13470259-13470278 Msa0009240:intron 45.0%
TGCGATCTTGTACAATCTGG+GGG - chr1_1:13470343-13470362 Msa0009240:CDS 45.0%
GCAGCAAGAATTTAGTCCTC+TGG - chr1_1:13470372-13470391 Msa0009240:CDS 45.0%
TGAACTGTATGACTCCGTCA+AGG - chr1_1:13470422-13470441 Msa0009240:intron 45.0%
TATGACTCCGTCAAGGTTGT+GGG - chr1_1:13470429-13470448 Msa0009240:intron 45.0%
!! AAGCAAAACTCTGGAGCTTC+TGG - chr1_1:13470670-13470689 Msa0009240:intron 45.0%
TAACAGAAATGAGACAGGGG+AGG + chr1_1:13470948-13470967 None:intergenic 45.0%
TTTGAAGGGATGCTCTGGTT+TGG + chr1_1:13471153-13471172 None:intergenic 45.0%
AGCTACAGGAGATAGTTCAG+GGG - chr1_1:13471263-13471282 Msa0009240:intron 45.0%
GGTGGAACACCTTTCATGAA+AGG - chr1_1:13471568-13471587 Msa0009240:intron 45.0%
GGAGATGATTTCCATGCAGA+TGG + chr1_1:13471604-13471623 None:intergenic 45.0%
CTGCATGGAAATCATCTCCT+TGG - chr1_1:13471605-13471624 Msa0009240:CDS 45.0%
GGAAATCATCTCCTTGGTTC+AGG - chr1_1:13471611-13471630 Msa0009240:CDS 45.0%
CGTAGCTTCTTTCACCTTCT+GGG + chr1_1:13471788-13471807 None:intergenic 45.0%
TCGTAGCTTCTTTCACCTTC+TGG + chr1_1:13471789-13471808 None:intergenic 45.0%
GAAAGAAGCTACGACGCTAT+CGG - chr1_1:13471795-13471814 Msa0009240:intron 45.0%
AAAGAAGCTACGACGCTATC+GGG - chr1_1:13471796-13471815 Msa0009240:intron 45.0%
!! GCATCTTGAGGTACTGCTTT+AGG + chr1_1:13471894-13471913 None:intergenic 45.0%
CGAGGGAAAAGCAAGCATAA+CGG + chr1_1:13471996-13472015 None:intergenic 45.0%
! TTGCTGCTATCACCCTTTTC+TGG + chr1_1:13472271-13472290 None:intergenic 45.0%
GCAGCAAATCCTCAGATAGT+CGG - chr1_1:13472284-13472303 Msa0009240:five_prime_UTR 45.0%
CTTTCATAGCCGACTATCTG+AGG + chr1_1:13472296-13472315 None:intergenic 45.0%
!!! TAATAATTTTTTTAATTAGT+CGG - chr1_1:13466527-13466546 Msa0009240:CDS 5.0%
ATTGCCTTTCCTCAGGAGGA+AGG - chr1_1:13466691-13466710 Msa0009240:CDS 50.0%
TTGCCTTTCCTCAGGAGGAA+GGG - chr1_1:13466692-13466711 Msa0009240:CDS 50.0%
ACACACACAGTGCAAGGACA+AGG + chr1_1:13467130-13467149 None:intergenic 50.0%
! AAAAGGGCAATGGACTCCTG+AGG - chr1_1:13467329-13467348 Msa0009240:CDS 50.0%
! CTCCTGAGGAGGTGATGTTT+TGG - chr1_1:13467343-13467362 Msa0009240:intron 50.0%
AAGGCTGTTCAGCGTTTCCA+AGG - chr1_1:13467482-13467501 Msa0009240:CDS 50.0%
TACGAACATGTCACCCCAAC+AGG + chr1_1:13467716-13467735 None:intergenic 50.0%
! GTCTGAAGCGGAGTGTTTCA+AGG - chr1_1:13467940-13467959 Msa0009240:CDS 50.0%
CACGGCCCTTTAACAAGTTC+AGG + chr1_1:13468013-13468032 None:intergenic 50.0%
!! CTGAACTTGTTAAAGGGCCG+TGG - chr1_1:13468011-13468030 Msa0009240:CDS 50.0%
TAAAGGGCCGTGGTCTAAAG+AGG - chr1_1:13468021-13468040 Msa0009240:CDS 50.0%
CATTGCTTCCCAATACGTCC+AGG + chr1_1:13468350-13468369 None:intergenic 50.0%
ATGGACACAGGAAGAGGAGT+TGG - chr1_1:13468876-13468895 Msa0009240:CDS 50.0%
ATGTGTTGTCATCAGTGCCC+CGG - chr1_1:13469052-13469071 Msa0009240:CDS 50.0%
! GTGGCAACCATTGATTGGCT+TGG + chr1_1:13469281-13469300 None:intergenic 50.0%
GCCTCGTGATGAGCAATTTC+TGG + chr1_1:13469572-13469591 None:intergenic 50.0%
GACCAGTACTCACATGAACC+TGG - chr1_1:13469611-13469630 Msa0009240:intron 50.0%
GGATGGTTAGATTGGGAGGA+TGG + chr1_1:13470073-13470092 None:intergenic 50.0%
GCTCAGCAGAATGAACTGGA+TGG + chr1_1:13470090-13470109 None:intergenic 50.0%
TCAGGCTCAGCAGAATGAAC+TGG + chr1_1:13470094-13470113 None:intergenic 50.0%
! TCTGTGTGCACGTTTGGGTT+TGG + chr1_1:13470253-13470272 None:intergenic 50.0%
CCCAAACGTGCACACAGAAA+AGG - chr1_1:13470255-13470274 Msa0009240:intron 50.0%
CACACAGAAAAGGAGGGCAA+TGG - chr1_1:13470265-13470284 Msa0009240:intron 50.0%
! ACCTCCACGTTTTCCAAGCT+TGG - chr1_1:13470303-13470322 Msa0009240:intron 50.0%
TCCAAGCTTGGAAAACGTGG+AGG + chr1_1:13470307-13470326 None:intergenic 50.0%
! ATAAACTGGCGGATACCCAG+AGG + chr1_1:13470391-13470410 None:intergenic 50.0%
GTATGACTCCGTCAAGGTTG+TGG - chr1_1:13470428-13470447 Msa0009240:intron 50.0%
CTCCTGGTAAGGTTAAGCAG+CGG - chr1_1:13470812-13470831 Msa0009240:intron 50.0%
ATGAGACAGGGGAGGACATA+GGG + chr1_1:13470940-13470959 None:intergenic 50.0%
AATGAGACAGGGGAGGACAT+AGG + chr1_1:13470941-13470960 None:intergenic 50.0%
CAAGGAGAGCTAAACCTGCA+AGG + chr1_1:13471192-13471211 None:intergenic 50.0%
CTCTCCTTGTGTTCGTGCAA+AGG - chr1_1:13471203-13471222 Msa0009240:intron 50.0%
TGCTCCTTTGCACGAACACA+AGG + chr1_1:13471210-13471229 None:intergenic 50.0%
GGATTCTTCAAGAGCCCAGA+AGG - chr1_1:13471771-13471790 Msa0009240:intron 50.0%
GCAGTACCTCAAGATGCATC+CGG - chr1_1:13471897-13471916 Msa0009240:intron 50.0%
TCGTTTCCGGATGCATCTTG+AGG + chr1_1:13471906-13471925 None:intergenic 50.0%
GGCAAGACACACACAGTGCA+AGG + chr1_1:13467136-13467155 None:intergenic 55.0%
ACACGCACACGCACACTGTA+GGG - chr1_1:13468745-13468764 Msa0009240:CDS 55.0%
! GGAAGCATGGACACAGGAAG+AGG - chr1_1:13468870-13468889 Msa0009240:CDS 55.0%
ACATGCTTCCCTTCCGTGTG+TGG - chr1_1:13469012-13469031 Msa0009240:CDS 55.0%
TCTGGACTATCGTCGCGAGA+TGG + chr1_1:13470460-13470479 None:intergenic 55.0%
TGCCGCTGCTTAACCTTACC+AGG + chr1_1:13470817-13470836 None:intergenic 55.0%
TCAATGGGCCCTTCCTCCTG+AGG + chr1_1:13466703-13466722 None:intergenic 60.0%
! AGGGCAATGGACTCCTGAGG+AGG - chr1_1:13467332-13467351 Msa0009240:intron 60.0%
CACACGCACACGCACACTGT+AGG - chr1_1:13468744-13468763 Msa0009240:CDS 60.0%
GGCGAGTCCCACAACCTTGA+CGG + chr1_1:13470439-13470458 None:intergenic 60.0%
GGGCCCTTCCTCCTGAGGAA+AGG + chr1_1:13466698-13466717 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 13465723 13472629 13465723 ID=Msa0009240;Name=Msa0009240
chr1_1 mRNA 13465723 13472629 13465723 ID=Msa0009240-mRNA-1;Parent=Msa0009240;Name=Msa0009240-mRNA-1;_AED=0.05;_eAED=0.05;_QI=484|0.90|0.91|1|0.90|0.83|12|317|1022
chr1_1 exon 13465723 13466123 13465723 ID=Msa0009240-mRNA-1:exon:5091;Parent=Msa0009240-mRNA-1
chr1_1 exon 13466381 13466587 13466381 ID=Msa0009240-mRNA-1:exon:5090;Parent=Msa0009240-mRNA-1
chr1_1 exon 13466677 13466788 13466677 ID=Msa0009240-mRNA-1:exon:5089;Parent=Msa0009240-mRNA-1
chr1_1 exon 13467027 13467349 13467027 ID=Msa0009240-mRNA-1:exon:5088;Parent=Msa0009240-mRNA-1
chr1_1 exon 13467467 13469285 13467467 ID=Msa0009240-mRNA-1:exon:5087;Parent=Msa0009240-mRNA-1
chr1_1 exon 13469387 13469515 13469387 ID=Msa0009240-mRNA-1:exon:5086;Parent=Msa0009240-mRNA-1
chr1_1 exon 13469974 13470077 13469974 ID=Msa0009240-mRNA-1:exon:5085;Parent=Msa0009240-mRNA-1
chr1_1 exon 13470310 13470404 13470310 ID=Msa0009240-mRNA-1:exon:5084;Parent=Msa0009240-mRNA-1
chr1_1 exon 13470828 13470885 13470828 ID=Msa0009240-mRNA-1:exon:5083;Parent=Msa0009240-mRNA-1
chr1_1 exon 13470999 13471053 13470999 ID=Msa0009240-mRNA-1:exon:5082;Parent=Msa0009240-mRNA-1
chr1_1 exon 13471597 13471778 13471597 ID=Msa0009240-mRNA-1:exon:5081;Parent=Msa0009240-mRNA-1
chr1_1 exon 13472245 13472629 13472245 ID=Msa0009240-mRNA-1:exon:5080;Parent=Msa0009240-mRNA-1
chr1_1 five_prime_UTR 13472245 13472629 13472245 ID=Msa0009240-mRNA-1:five_prime_utr;Parent=Msa0009240-mRNA-1
chr1_1 five_prime_UTR 13471680 13471778 13471680 ID=Msa0009240-mRNA-1:five_prime_utr;Parent=Msa0009240-mRNA-1
chr1_1 CDS 13471597 13471679 13471597 ID=Msa0009240-mRNA-1:cds;Parent=Msa0009240-mRNA-1
chr1_1 CDS 13470999 13471053 13470999 ID=Msa0009240-mRNA-1:cds;Parent=Msa0009240-mRNA-1
chr1_1 CDS 13470828 13470885 13470828 ID=Msa0009240-mRNA-1:cds;Parent=Msa0009240-mRNA-1
chr1_1 CDS 13470310 13470404 13470310 ID=Msa0009240-mRNA-1:cds;Parent=Msa0009240-mRNA-1
chr1_1 CDS 13469974 13470077 13469974 ID=Msa0009240-mRNA-1:cds;Parent=Msa0009240-mRNA-1
chr1_1 CDS 13469387 13469515 13469387 ID=Msa0009240-mRNA-1:cds;Parent=Msa0009240-mRNA-1
chr1_1 CDS 13467467 13469285 13467467 ID=Msa0009240-mRNA-1:cds;Parent=Msa0009240-mRNA-1
chr1_1 CDS 13467027 13467349 13467027 ID=Msa0009240-mRNA-1:cds;Parent=Msa0009240-mRNA-1
chr1_1 CDS 13466677 13466788 13466677 ID=Msa0009240-mRNA-1:cds;Parent=Msa0009240-mRNA-1
chr1_1 CDS 13466381 13466587 13466381 ID=Msa0009240-mRNA-1:cds;Parent=Msa0009240-mRNA-1
chr1_1 CDS 13466040 13466123 13466040 ID=Msa0009240-mRNA-1:cds;Parent=Msa0009240-mRNA-1
chr1_1 three_prime_UTR 13465723 13466039 13465723 ID=Msa0009240-mRNA-1:three_prime_utr;Parent=Msa0009240-mRNA-1
Gene Sequence

>Msa0009240

ATGGACGGTGAACGAATAATTGCCTTTCCTCAGGAGGAAGGGCCCATTGATAGTGTTGAGAAAGTTAGAGCAGCATTACATGGGAGGACTACTGGTCCTACAAGACGTTCTACAAAAGGGCAATGGACTCCTGAGGAGGATGAGACATTACGAAAGGCTGTTCAGCGTTTCCAAGGAAAAAATTGGAAAAAAATAGCGGAGTGTTTCAAGGATAGAACTGATGTGCAATGCTTACATAGGTGGCAGAAAGTGTTGAATCCTGAACTTGTTAAAGGGCCGTGGTCTAAAGAGGAAGATGACGTGATGATTGAATTGGTGAACAAATATGGGCCTAAGAAGTGGTCAACTATCGCACAACATTTACCTGGACGTATTGGGAAGCAATGTCGAGAAAGGTGGCATAATCATCTTAATCCTGCTATAAACAAGGAAGCATGGACACAGGAAGAGGAGTTGGCTCTAATACGTGCTCATCAGATTTATGGGAACAAGTGGGCGGAATTAACGAAGTTTTTGCCTGGAAGTGCCCCGGTTTTTTCATGTCGAGTTCTAGTTCATTCTCAGTCTTCTGCTTATCGACATGCTTTTAGATTTATTGAGTACTTGTACTTCTATGGAAGCAGGACAGACAATGCTATTAAAAACCACTGGAACAGTTCAGTCAAAAAGAAATTGGATTCTTACTTGGCATCAGGCTTGCTCACTCAATTGCAATCTGCACCTCATGTTGGAAATCCAAGCCAATCAATGGTTGCCACATCTTCAAGGTCGCAATGTAATGAAGATGAGAATGCTCTTCAGCGGATTGAAGGAGATGAAGTTTTAGAGTGTAGTCATGAGTCAGCTAATGCTCTCCACTTTCCATCGACTAGAGAGATAACCAGTGTTGACTTACAACCTGAAGAGGAGAATAGACCAATTGAAGAATGTAGTTTTGGGATGGATCATAGTCCAAGTCAAGCATCCTGTTCAGAGCCATATCTTGTATCAATTGACGACTCAATTGACGATGTTACTATATGCATTCCAGAAATTGCTCATCACGAGGCATGCTCTTCTGAATTCAATGACCAGTACTCACATGAACCTGGAAATTCCATAAATGAGGATCGCCACCTTAACTTACATTCCTTACCCAATATTTCATCAATGGACTTAGGGAAGGAATCCCCGCAGATGCAAAGAGATTGTACAGATCCTAGTGGAATACGTGACTTGGTAAATGTTCCATATCAGACTTCAGTGGGTTTAGCTGCTTCAACGCACATGGAAACTACATCTATGGATTCTGCTAAACCAGATCATATGCTGATATCTGATGACGAATGTTGCAGAGTCCTGTTTTCAGAGGCAAATAATGATATACGTTTTATCCAAGGAGATTATAATAAAGGTGTTGGTACTGTTGAATTTTCTGGTCACCCTGCATTTGTTTGTCAATCATGTCGTATTCTGATTTTCGAAACTGGTGGAACCTCAACTCTGCCATTAACTTGTCCTCAGTGTTCTAATAATTTCAAAGGAATGCCATCCTCCCAATCTAACCATCCAGTTCATTCTGCTGAGCCTGAGAATCAGCAGTTTGTCTCCAGAGCACCTGATAACTTCACTTATGCCAATGACATATCCAGTTCTCATTGTATTGATGCTATAGATAGTGCAGTAATGCAAGATGTTAATCAAAACTGTTGTCCAACAGATGAAAATCCAAACCCAAACGTGCACACAGAAAAGGAGGGCAATGGTGCACTATGTTATGAACCTCCACGTTTTCCAAGCTTGGATATTCCTTTCTTGAGTTGCGATCTTGTACAATCTGGGGGTGATATGCAGCAAGAATTTAGTCCTCTGGGTATCCGCCAGTTTATGATGTCTTCTATGAACTGTATGACTCCGTCAAGGTTGTGGGACTCGCCATCTCGCGACGATAGTCCAGAAGCATTATTGAAAAGTGCAGCTAAAACTTTTACGGGTACACCATCAATATTAAAGAAACGATGCCGAGATTTGTTATCACCACTTTCAGATAAAAGAATCGGCAAGAAACTTGAGACTGACACGTCATCCTCTTTGTCCAAAGCTTTTTCTATTTTGGAAGCAGATATACTTTCTCCATCTTCATTGCAAAAGCAAAACTCTGGAGCTTCTGGTTTTGATGACGATAAAGAAAATTGCGGACAAGCTGATAAAGGTAAACAAGTAGAGGAGACAGATAAATCGGCAATTTTGGAAGAAAAGAAGTCTCGAAGAGATTTTCTTGACAGTAATTCTCCTGGTAAGGTTAAGCAGCGGCATTTTTACGTTGATTCTAAAATGAAGATTGATGCTGCTGCTTCTGAGATTGTGCAACAATCTTCTGGAGTTTTGTCTGAACATGATAGGAACGACCTTTCATTATATTCATCTGATCAAGTTGGTTTTAGAGACAGAGTTGTAGGTTCTAGTGTTAGAACTCCCAGAAACTTGAACAATAGGAGCTCGGAAACAGCTCCAAACCAGAGCATCCCTTCAAAATTATCTTCTGAGAATCCTTGCAGGTTTAGCTCTCCTTGTGTTCGTGCAAAGGAGCATGAAAATCTTACAGTTTCTGTTAATCGTGTGAAAGCTACAGGAGATAGTTCAGGGGATCAAAGTAAAAATGATGGAGGTTTTGAAACCTATAGCATATTTGGTGGAACACCTTTCATGAAAGGTTTTGAATCACCATCTGCATGGAAATCATCTCCTTGGTTCAGGAATACTTTTCTCTGTAGCCCTAATACTGAAATTAAAATTGAGGATTTTGGATTCTTCAAGAGCCCAGAAGGTGAAAGAAGCTACGACGCTATCGGGTTGTTAAAACAAGTCGGTGAACAAACTGCTGCTACATATGAAAATGCACAGGAGCTTTTGAAAAATGATACTCCTAAAGCAGTACCTCAAGATGCATCCGGAAACGATAATAGTCCTAGCGCGAACAATTCTAAATTGAATTCAAATGCTTTGGTTGAGCGACGCGTGCTTGACTTTAGTGAATGTGGAACACCAGAAAAGGGTGATAGCAGCAAATCCTCAGATAGTCGGCTATGA
Protein sequence

>Msa0009240

MDGERIIAFPQEEGPIDSVEKVRAALHGRTTGPTRRSTKGQWTPEEDETLRKAVQRFQGKNWKKIAECFKDRTDVQCLHRWQKVLNPELVKGPWSKEEDDVMIELVNKYGPKKWSTIAQHLPGRIGKQCRERWHNHLNPAINKEAWTQEEELALIRAHQIYGNKWAELTKFLPGSAPVFSCRVLVHSQSSAYRHAFRFIEYLYFYGSRTDNAIKNHWNSSVKKKLDSYLASGLLTQLQSAPHVGNPSQSMVATSSRSQCNEDENALQRIEGDEVLECSHESANALHFPSTREITSVDLQPEEENRPIEECSFGMDHSPSQASCSEPYLVSIDDSIDDVTICIPEIAHHEACSSEFNDQYSHEPGNSINEDRHLNLHSLPNISSMDLGKESPQMQRDCTDPSGIRDLVNVPYQTSVGLAASTHMETTSMDSAKPDHMLISDDECCRVLFSEANNDIRFIQGDYNKGVGTVEFSGHPAFVCQSCRILIFETGGTSTLPLTCPQCSNNFKGMPSSQSNHPVHSAEPENQQFVSRAPDNFTYANDISSSHCIDAIDSAVMQDVNQNCCPTDENPNPNVHTEKEGNGALCYEPPRFPSLDIPFLSCDLVQSGGDMQQEFSPLGIRQFMMSSMNCMTPSRLWDSPSRDDSPEALLKSAAKTFTGTPSILKKRCRDLLSPLSDKRIGKKLETDTSSSLSKAFSILEADILSPSSLQKQNSGASGFDDDKENCGQADKGKQVEETDKSAILEEKKSRRDFLDSNSPGKVKQRHFYVDSKMKIDAAASEIVQQSSGVLSEHDRNDLSLYSSDQVGFRDRVVGSSVRTPRNLNNRSSETAPNQSIPSKLSSENPCRFSSPCVRAKEHENLTVSVNRVKATGDSSGDQSKNDGGFETYSIFGGTPFMKGFESPSAWKSSPWFRNTFLCSPNTEIKIEDFGFFKSPEGERSYDAIGLLKQVGEQTAATYENAQELLKNDTPKAVPQDASGNDNSPSANNSKLNSNALVERRVLDFSECGTPEKGDSSKSSDSRL*