AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0011070

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0011070 MtrunA17_Chr1g0159661 92.308 169 13 0 6 174 1 169 1.20e-111 317
Msa0011070 MtrunA17_Chr3g0125241 75.449 167 41 0 6 172 26 192 4.13e-90 263
Msa0011070 MtrunA17_Chr3g0142191 46.479 142 76 0 6 147 1 142 2.75e-41 140
Msa0011070 MtrunA17_Chr5g0404951 37.156 218 123 5 6 213 1 214 4.19e-37 129
Msa0011070 MtrunA17_Chr1g0164791 38.728 173 94 3 6 166 1 173 2.65e-35 124
Msa0011070 MtrunA17_Chr8g0351051 42.529 174 89 4 6 170 1 172 6.37e-35 124
Msa0011070 MtrunA17_Chr6g0474371 40.462 173 88 4 6 166 1 170 1.24e-33 119
Msa0011070 MtrunA17_Chr4g0061691 40.462 173 79 5 6 162 1 165 3.07e-31 114
Msa0011070 MtrunA17_Chr3g0077501 41.497 147 79 2 6 147 1 145 3.44e-31 114
Msa0011070 MtrunA17_Chr3g0097101 40.268 149 82 2 4 147 14 160 3.94e-31 114
Msa0011070 MtrunA17_Chr7g0220111 41.379 174 93 4 6 171 1 173 5.13e-31 114
Msa0011070 MtrunA17_Chr7g0220121 39.521 167 93 3 6 165 1 166 7.05e-31 114
Msa0011070 MtrunA17_Chr6g0455511 41.379 174 93 4 6 171 1 173 7.30e-31 113
Msa0011070 MtrunA17_Chr8g0366231 38.182 165 94 4 6 162 1 165 1.42e-30 112
Msa0011070 MtrunA17_Chr5g0420081 40.000 170 92 5 6 166 1 169 2.47e-30 112
Msa0011070 MtrunA17_Chr4g0061671 42.361 144 79 2 6 146 1 143 2.75e-30 110
Msa0011070 MtrunA17_Chr3g0122251 39.535 172 91 4 6 165 1 171 2.89e-30 112
Msa0011070 MtrunA17_Chr7g0246431 37.647 170 95 3 6 166 1 168 5.74e-30 110
Msa0011070 MtrunA17_Chr2g0284911 40.940 149 81 3 4 147 14 160 6.36e-30 111
Msa0011070 MtrunA17_Chr8g0380021 41.497 147 79 3 6 147 17 161 3.35e-29 109
Msa0011070 MtrunA17_Chr8g0351031 36.905 168 92 4 6 162 1 165 8.25e-29 107
Msa0011070 MtrunA17_Chr5g0420091 34.653 202 113 5 6 189 1 201 1.76e-28 106
Msa0011070 MtrunA17_Chr1g0204111 39.394 165 90 4 2 160 13 173 2.96e-28 107
Msa0011070 MtrunA17_Chr5g0411691 31.579 228 127 6 6 213 1 219 8.37e-28 105
Msa0011070 MtrunA17_Chr8g0351041 37.748 151 84 3 6 149 1 148 8.63e-28 103
Msa0011070 MtrunA17_Chr2g0279821 36.628 172 79 4 6 166 1 153 2.27e-27 104
Msa0011070 MtrunA17_Chr5g0427401 38.922 167 93 4 6 165 1 165 2.48e-27 103
Msa0011070 MtrunA17_Chr4g0057151 38.824 170 91 5 6 165 1 167 6.88e-27 102
Msa0011070 MtrunA17_Chr4g0049541 36.184 152 81 3 6 148 1 145 2.44e-26 101
Msa0011070 MtrunA17_Chr5g0412461 37.278 169 92 4 6 163 1 166 9.40e-26 99.8
Msa0011070 MtrunA17_Chr4g0049901 35.429 175 100 4 6 169 27 199 1.26e-24 97.1
Msa0011070 MtrunA17_Chr5g0412271 37.427 171 89 5 6 163 1 166 2.79e-24 95.9
Msa0011070 MtrunA17_Chr4g0020221 42.953 149 76 3 6 147 1 147 8.07e-24 95.5
Msa0011070 MtrunA17_Chr1g0173161 58.571 70 28 1 6 75 1 69 3.14e-23 89.0
Msa0011070 MtrunA17_Chr4g0018421 31.818 176 108 4 6 170 1 175 6.70e-23 91.7
Msa0011070 MtrunA17_Chr2g0308251 58.462 65 27 0 6 70 1 65 1.65e-22 87.4
Msa0011070 MtrunA17_Chr7g0246381 58.065 62 26 0 6 67 1 62 7.59e-22 85.1
Msa0011070 MtrunA17_Chr8g0377561 61.404 57 22 0 6 62 1 57 3.87e-21 84.0
Msa0011070 MtrunA17_Chr4g0044071 56.140 57 25 0 6 62 1 57 9.25e-19 78.6
Msa0011070 MtrunA17_Chr5g0425191 54.386 57 26 0 6 62 1 57 1.09e-18 77.8
Msa0011070 MtrunA17_Chr8g0379021 44.776 67 37 0 1 67 6 72 1.35e-18 79.7
Msa0011070 MtrunA17_Chr5g0427921 55.932 59 26 0 6 64 1 59 1.52e-18 76.3
Msa0011070 MtrunA17_Chr3g0134451 41.346 104 55 3 6 106 1 101 8.34e-18 80.1
Msa0011070 MtrunA17_Chr5g0419601 38.095 126 53 3 4 104 6 131 1.32e-17 78.2
Msa0011070 MtrunA17_Chr2g0333981 44.776 67 37 0 4 70 9 75 1.93e-17 76.6
Msa0011070 MtrunA17_Chr1g0188671 40.860 93 52 2 4 93 44 136 1.32e-16 76.3
Msa0011070 MtrunA17_Chr4g0060841 38.462 104 64 0 6 109 1 104 1.43e-16 77.0
Msa0011070 MtrunA17_Chr1g0169761 29.730 148 99 2 6 152 1 144 1.47e-16 74.3
Msa0011070 MtrunA17_Chr1g0208561 50.000 66 32 1 7 71 9 74 2.74e-16 74.7
Msa0011070 MtrunA17_Chr3g0089141 50.000 66 32 1 7 71 9 74 3.33e-16 74.3
Msa0011070 MtrunA17_Chr4g0052081 55.000 60 27 0 6 65 1 60 3.53e-16 73.2
Msa0011070 MtrunA17_Chr8g0376821 41.538 65 38 0 6 70 1 65 5.51e-16 72.8
Msa0011070 MtrunA17_Chr1g0175611 41.538 65 38 0 6 70 1 65 8.57e-16 72.0
Msa0011070 MtrunA17_Chr8g0357771 45.161 62 34 0 6 67 1 62 1.28e-15 72.0
Msa0011070 MtrunA17_Chr5g0417661 54.717 53 24 0 6 58 56 108 1.47e-15 70.5
Msa0011070 MtrunA17_Chr1g0208581 50.000 66 32 1 7 71 9 74 1.57e-15 72.4
Msa0011070 MtrunA17_Chr3g0099421 50.000 70 33 1 7 76 34 101 1.64e-15 73.2
Msa0011070 MtrunA17_Chr2g0317481 51.515 66 31 1 7 71 9 74 1.74e-15 72.8
Msa0011070 MtrunA17_Chr2g0317451 51.515 66 31 1 7 71 9 74 1.80e-15 72.4
Msa0011070 MtrunA17_Chr1g0175601 41.538 65 38 0 6 70 1 65 2.66e-15 70.9
Msa0011070 MtrunA17_Chr1g0149391 51.515 66 31 1 7 71 9 74 2.70e-15 72.0
Msa0011070 MtrunA17_Chr1g0187361 47.826 69 35 1 4 71 6 74 2.78e-15 72.0
Msa0011070 MtrunA17_Chr4g0052061 47.541 61 32 0 6 66 1 61 3.04e-15 70.5
Msa0011070 MtrunA17_Chr1g0180591 38.462 65 40 0 6 70 1 65 4.52e-15 70.5
Msa0011070 MtrunA17_Chr2g0292791 47.826 69 35 1 4 71 6 74 4.58e-15 71.6
Msa0011070 MtrunA17_Chr1g0206701 48.485 66 33 1 7 71 9 74 5.23e-15 71.2
Msa0011070 MtrunA17_Chr3g0099411 48.485 66 33 1 7 71 9 74 9.29e-15 70.5
Msa0011070 MtrunA17_Chr5g0422421 51.515 66 31 1 7 71 9 74 9.70e-15 70.5
Msa0011070 MtrunA17_Chr1g0206721 48.485 66 33 1 7 71 9 74 9.80e-15 70.5
Msa0011070 MtrunA17_Chr8g0355091 48.485 66 33 1 7 71 9 74 9.90e-15 70.5
Msa0011070 MtrunA17_Chr4g0074101 38.462 65 40 0 6 70 1 65 1.08e-14 69.7
Msa0011070 MtrunA17_Chr5g0422941 50.000 66 32 1 7 71 9 74 1.59e-14 70.1
Msa0011070 MtrunA17_Chr1g0206991 46.970 66 34 1 7 71 9 74 1.77e-14 68.9
Msa0011070 MtrunA17_Chr2g0300421 49.153 59 30 0 7 65 9 67 2.37e-14 68.2
Msa0011070 MtrunA17_Chr8g0356071 43.077 65 37 0 6 70 1 65 3.48e-14 67.8
Msa0011070 MtrunA17_Chr2g0325971 46.970 66 34 1 7 71 9 74 4.99e-14 68.6
Msa0011070 MtrunA17_Chr6g0457851 31.250 112 62 2 6 102 11 122 7.23e-14 69.3
Msa0011070 MtrunA17_Chr3g0085241 32.520 123 64 3 2 107 36 156 3.97e-13 66.2
Msa0011070 MtrunA17_Chr4g0018951 50.000 52 26 0 19 70 24 75 3.98e-13 65.1
Msa0011070 MtrunA17_Chr3g0111841 51.852 54 26 0 13 66 2 55 5.66e-13 62.0
Msa0011070 MtrunA17_Chr1g0166611 51.064 47 23 0 18 64 17 63 5.76e-13 63.5
Msa0011070 MtrunA17_Chr3g0119901 37.333 75 45 1 2 76 4 76 8.26e-13 64.7
Msa0011070 MtrunA17_Chr2g0300441 47.059 68 33 2 7 71 7 74 1.40e-12 64.7
Msa0011070 MtrunA17_Chr3g0089151 43.939 66 36 1 7 71 9 74 1.49e-12 62.4
Msa0011070 MtrunA17_Chr6g0449851 36.905 84 47 1 6 83 1 84 1.03e-11 62.8
Msa0011070 MtrunA17_Chr1g0212151 27.891 147 88 3 6 137 1 144 1.37e-11 62.8
Msa0011070 MtrunA17_Chr4g0071601 46.875 64 34 0 4 67 9 72 4.37e-11 59.7
Msa0011070 MtrunA17_Chr1g0187351 38.889 72 40 2 16 86 1 69 7.38e-11 56.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0011070 AT5G20240.1 53.731 201 87 2 6 206 1 195 8.55e-70 212
Msa0011070 AT5G20240.2 59.441 143 58 0 6 148 1 143 1.23e-58 182
Msa0011070 AT5G23260.4 37.705 183 108 2 2 178 13 195 2.49e-37 131
Msa0011070 AT3G54340.1 44.286 140 78 0 6 145 1 140 2.51e-37 130
Msa0011070 AT5G23260.1 37.430 179 109 2 2 178 13 190 5.49e-37 130
Msa0011070 AT5G23260.2 37.430 179 106 2 6 178 1 179 2.94e-36 128
Msa0011070 AT5G23260.3 37.143 175 98 2 6 178 1 165 2.49e-34 122
Msa0011070 AT5G13790.1 46.528 144 63 4 6 144 1 135 6.84e-33 119
Msa0011070 AT3G58780.1 40.667 150 82 2 3 147 13 160 7.90e-33 119
Msa0011070 AT3G58780.5 40.667 150 82 2 3 147 19 166 8.44e-33 119
Msa0011070 AT5G13790.2 46.897 145 64 4 6 144 1 138 8.76e-33 119
Msa0011070 AT2G42830.1 40.667 150 82 2 3 147 13 160 1.33e-32 118
Msa0011070 AT4G24540.1 41.071 168 87 4 6 163 1 166 1.36e-32 117
Msa0011070 AT2G42830.2 40.667 150 82 2 3 147 13 160 1.68e-32 118
Msa0011070 AT3G58780.4 40.541 148 81 2 3 145 13 158 2.66e-32 118
Msa0011070 AT3G61120.1 36.406 217 127 4 6 213 1 215 4.36e-32 117
Msa0011070 AT4G11880.2 40.881 159 86 3 6 160 1 155 4.49e-32 115
Msa0011070 AT4G11880.3 40.881 159 86 3 6 160 1 155 4.49e-32 115
Msa0011070 AT2G45660.1 36.082 194 108 5 6 189 1 188 4.71e-32 116
Msa0011070 AT1G26310.1 41.916 167 87 3 6 162 1 167 1.20e-31 116
Msa0011070 AT4G11880.4 41.722 151 80 3 6 152 1 147 1.64e-31 115
Msa0011070 AT4G11880.1 41.722 151 80 3 6 152 1 147 1.64e-31 115
Msa0011070 AT4G22950.2 39.634 164 90 3 6 165 1 159 2.77e-31 112
Msa0011070 AT5G60910.1 40.462 173 85 4 6 165 1 168 3.08e-31 114
Msa0011070 AT5G51870.4 36.723 177 92 4 6 164 1 175 3.25e-31 114
Msa0011070 AT2G45660.2 39.597 149 83 2 6 149 1 147 3.67e-31 112
Msa0011070 AT3G02310.1 42.778 180 93 5 6 176 1 179 4.74e-31 114
Msa0011070 AT3G02310.2 46.809 141 69 3 6 141 1 140 4.85e-31 113
Msa0011070 AT5G51870.3 36.723 177 92 4 6 164 11 185 6.04e-31 113
Msa0011070 AT3G58780.2 39.333 150 77 2 3 147 13 153 8.11e-31 113
Msa0011070 AT5G15800.1 41.667 180 95 5 6 176 1 179 1.35e-30 113
Msa0011070 AT4G22950.3 39.634 164 90 3 6 165 1 159 1.53e-30 112
Msa0011070 AT4G22950.1 39.634 164 90 3 6 165 1 159 1.53e-30 112
Msa0011070 AT5G15800.2 41.667 180 95 5 6 176 1 179 1.70e-30 113
Msa0011070 AT5G51870.1 39.286 168 87 5 6 165 1 161 5.03e-30 110
Msa0011070 AT3G58780.3 35.838 173 83 2 3 147 13 185 6.54e-30 112
Msa0011070 AT5G51870.5 37.500 152 87 2 1 146 19 168 1.95e-29 108
Msa0011070 AT4G09960.1 40.136 147 81 2 6 147 1 145 2.34e-29 109
Msa0011070 AT2G45650.1 35.266 207 123 4 6 204 1 204 2.49e-29 110
Msa0011070 AT4G09960.6 40.136 147 81 2 6 147 2 146 2.61e-29 109
Msa0011070 AT1G69120.2 38.824 170 94 5 6 166 1 169 3.85e-29 108
Msa0011070 AT4G09960.5 40.136 147 81 2 6 147 11 155 3.88e-29 109
Msa0011070 AT4G09960.3 40.136 147 81 2 6 147 27 171 4.62e-29 109
Msa0011070 AT5G51870.2 38.095 147 83 2 6 146 1 145 5.88e-29 107
Msa0011070 AT4G09960.2 40.278 144 79 2 6 144 1 142 6.22e-29 108
Msa0011070 AT1G69120.1 38.824 170 94 5 6 166 1 169 8.10e-29 108
Msa0011070 AT1G24260.1 37.989 179 91 5 6 169 1 174 3.63e-28 107
Msa0011070 AT4G09960.4 37.714 175 86 4 6 171 96 256 3.95e-28 108
Msa0011070 AT1G24260.3 43.056 144 73 3 6 141 1 143 4.21e-28 106
Msa0011070 AT1G24260.2 39.205 176 94 5 6 169 1 175 4.73e-28 106
Msa0011070 AT2G14210.1 38.202 178 91 5 6 170 1 172 8.36e-28 105
Msa0011070 AT2G14210.2 38.202 178 91 5 6 170 1 172 1.38e-27 105
Msa0011070 AT3G57230.1 34.659 176 91 4 6 166 1 167 1.82e-27 104
Msa0011070 AT3G57230.4 34.659 176 91 4 6 166 1 167 1.82e-27 104
Msa0011070 AT3G30260.1 37.500 144 84 3 6 144 1 143 2.06e-27 105
Msa0011070 AT4G18960.1 39.597 149 83 2 4 147 15 161 2.08e-27 105
Msa0011070 AT3G57390.3 34.444 180 102 4 6 172 1 177 4.72e-27 103
Msa0011070 AT3G57230.2 36.424 151 76 3 6 145 1 142 4.79e-27 101
Msa0011070 AT3G57390.1 34.444 180 102 4 6 172 1 177 8.10e-27 103
Msa0011070 AT5G51860.2 35.333 150 89 2 6 149 1 148 3.38e-26 100
Msa0011070 AT2G03710.3 35.503 169 99 3 6 165 1 168 3.40e-26 100
Msa0011070 AT2G03710.2 35.429 175 101 3 6 170 1 173 3.85e-26 101
Msa0011070 AT5G51860.1 35.333 150 89 2 6 149 1 148 4.04e-26 100
Msa0011070 AT2G03710.1 35.429 175 101 3 6 170 1 173 4.14e-26 101
Msa0011070 AT5G62165.17 35.099 151 87 3 6 149 1 147 4.16e-25 96.7
Msa0011070 AT5G62165.12 35.099 151 87 3 6 149 1 147 4.16e-25 96.7
Msa0011070 AT5G62165.11 35.099 151 87 3 6 149 1 147 4.16e-25 96.7
Msa0011070 AT5G62165.3 34.884 172 97 4 6 166 1 168 4.34e-25 97.8
Msa0011070 AT5G62165.1 34.884 172 97 4 6 166 1 168 4.34e-25 97.8
Msa0011070 AT5G62165.2 34.884 172 97 4 6 166 1 168 4.34e-25 97.8
Msa0011070 AT5G62165.6 35.570 149 85 3 6 147 1 145 1.03e-24 95.5
Msa0011070 AT5G62165.9 35.570 149 85 3 6 147 1 145 1.03e-24 95.5
Msa0011070 AT5G62165.7 35.570 149 85 3 6 147 1 145 1.03e-24 95.5
Msa0011070 AT5G62165.8 35.570 149 85 3 6 147 1 145 1.03e-24 95.5
Msa0011070 AT5G62165.13 35.570 149 85 3 6 147 1 145 1.03e-24 95.5
Msa0011070 AT2G22540.3 36.905 168 94 5 6 163 1 166 1.72e-24 97.1
Msa0011070 AT2G22540.1 36.905 168 94 5 6 163 1 166 1.72e-24 97.1
Msa0011070 AT4G37940.3 34.416 154 81 3 6 148 1 145 2.17e-24 95.1
Msa0011070 AT4G37940.4 34.884 172 82 5 6 166 1 153 2.99e-24 95.9
Msa0011070 AT5G10140.3 33.514 185 119 2 6 190 1 181 5.20e-24 94.4
Msa0011070 AT4G37940.1 36.054 147 74 3 6 141 1 138 7.62e-24 95.1
Msa0011070 AT2G22630.1 35.227 176 90 5 6 166 1 167 1.00e-23 94.7
Msa0011070 AT2G22630.2 35.227 176 90 5 6 166 1 167 1.00e-23 94.7
Msa0011070 AT5G10140.1 31.633 196 129 3 6 200 1 192 1.13e-23 94.0
Msa0011070 AT5G62165.10 35.714 168 87 4 6 166 1 154 1.26e-23 93.6
Msa0011070 AT5G62165.4 35.714 168 87 4 6 166 1 154 1.26e-23 93.6
Msa0011070 AT5G10140.2 36.620 142 86 2 6 147 1 138 1.95e-23 92.4
Msa0011070 AT5G10140.4 36.620 142 86 2 6 147 1 138 4.63e-23 92.0
Msa0011070 AT1G71692.1 35.227 176 97 4 6 165 1 175 6.25e-23 92.4
Msa0011070 AT5G62165.14 54.795 73 31 1 6 78 1 71 7.51e-22 86.7
Msa0011070 AT2G22540.2 35.119 168 92 5 6 163 1 161 2.92e-21 88.6
Msa0011070 AT5G65060.1 32.948 173 104 4 6 174 1 165 1.75e-20 85.5
Msa0011070 AT1G31140.2 33.108 148 93 1 6 147 1 148 4.41e-20 84.7
Msa0011070 AT5G65060.3 32.927 164 102 3 6 165 1 160 4.63e-20 84.3
Msa0011070 AT1G31140.1 33.562 146 93 2 6 147 1 146 1.74e-19 83.2
Msa0011070 AT5G65050.2 32.121 165 102 5 6 165 1 160 2.49e-19 82.0
Msa0011070 AT5G65050.3 29.557 203 124 7 6 198 1 194 3.19e-19 82.0
Msa0011070 AT5G65070.1 31.361 169 100 5 6 166 1 161 1.64e-18 80.5
Msa0011070 AT1G77080.5 32.370 173 109 3 6 174 1 169 8.49e-18 77.8
Msa0011070 AT1G77080.4 30.964 197 123 5 6 197 1 189 1.81e-17 77.4
Msa0011070 AT1G77980.1 49.296 71 35 1 6 76 1 70 1.87e-17 79.7
Msa0011070 AT5G65050.1 33.566 143 89 4 6 147 1 138 2.16e-17 77.0
Msa0011070 AT5G65070.4 43.056 72 40 1 6 77 1 71 2.27e-17 75.9
Msa0011070 AT5G65060.2 32.370 173 94 5 6 174 1 154 2.32e-17 77.0
Msa0011070 AT1G18750.1 36.893 103 65 0 6 108 1 103 2.96e-17 79.7
Msa0011070 AT1G18750.4 36.893 103 65 0 6 108 1 103 3.24e-17 79.3
Msa0011070 AT1G18750.3 36.893 103 65 0 6 108 1 103 3.25e-17 79.7
Msa0011070 AT1G22130.1 49.296 71 35 1 6 76 1 70 3.97e-17 79.0
Msa0011070 AT5G65050.5 29.327 208 107 9 6 198 1 183 4.77e-17 76.3
Msa0011070 AT1G77080.11 32.927 164 102 3 6 165 1 160 7.03e-17 75.5
Msa0011070 AT1G77080.2 32.487 197 116 5 6 197 1 185 7.65e-17 75.9
Msa0011070 AT1G01530.1 47.692 65 34 0 1 65 1 65 8.51e-17 76.6
Msa0011070 AT2G03060.3 34.615 104 68 0 6 109 1 104 1.02e-16 78.2
Msa0011070 AT2G03060.7 34.615 104 68 0 6 109 1 104 1.02e-16 78.2
Msa0011070 AT2G03060.1 34.615 104 68 0 6 109 1 104 1.02e-16 78.2
Msa0011070 AT2G03060.2 34.615 104 68 0 6 109 1 104 1.06e-16 78.2
Msa0011070 AT1G77950.3 49.296 71 35 1 6 76 1 70 1.12e-16 76.6
Msa0011070 AT1G77950.2 49.296 71 35 1 6 76 1 70 1.12e-16 76.6
Msa0011070 AT1G77950.1 49.296 71 35 1 6 76 1 70 1.12e-16 76.6
Msa0011070 AT1G77950.4 49.296 71 35 1 6 76 1 70 1.12e-16 76.6
Msa0011070 AT5G65080.3 28.402 169 114 3 2 170 4 165 1.21e-16 75.1
Msa0011070 AT5G65070.2 43.056 72 40 1 6 77 1 71 1.26e-16 75.9
Msa0011070 AT5G65070.5 43.056 72 40 1 6 77 1 71 1.81e-16 75.1
Msa0011070 AT5G65080.2 28.049 164 91 3 2 154 4 151 4.57e-16 73.9
Msa0011070 AT1G65360.1 43.836 73 38 1 1 73 1 70 8.74e-16 73.6
Msa0011070 AT5G65070.3 47.458 59 31 0 6 64 1 59 1.70e-15 72.8
Msa0011070 AT1G47760.1 37.624 101 57 2 6 106 1 95 3.73e-15 71.2
Msa0011070 AT4G37435.1 43.836 73 38 1 6 75 1 73 1.23e-14 69.7
Msa0011070 AT2G34440.1 35.514 107 58 3 6 108 1 100 1.88e-14 68.9
Msa0011070 AT1G77080.8 28.054 221 125 6 6 197 1 216 2.65e-14 69.7
Msa0011070 AT1G77080.12 34.507 142 85 2 6 147 1 134 2.85e-14 67.8
Msa0011070 AT1G69540.1 35.922 103 65 1 6 108 1 102 3.83e-14 70.5
Msa0011070 AT1G69540.2 35.922 103 65 1 6 108 1 102 4.20e-14 70.5
Msa0011070 AT4G36590.1 42.105 76 42 1 7 82 7 80 4.84e-14 69.3
Msa0011070 AT5G60440.1 37.234 94 53 2 1 93 1 89 9.04e-14 68.9
Msa0011070 AT3G66656.1 30.833 120 64 2 6 106 1 120 2.33e-13 66.2
Msa0011070 AT2G24840.1 41.667 72 40 1 5 76 61 130 2.47e-13 67.4
Msa0011070 AT3G04100.1 45.000 60 33 0 7 66 14 73 3.93e-13 66.2
Msa0011070 AT2G26320.1 38.889 72 44 0 5 76 16 87 4.64e-12 60.8
Msa0011070 AT1G72350.1 50.000 56 28 0 7 62 43 98 1.45e-11 62.0

Find 38 sgRNAs with CRISPR-Local

Find 190 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACTATCATCTTTGCTCCTTC+TGG 0.286754 1_1:-16728563 Msa0011070:CDS
AAGAATAATTACGTGGTAGA+AGG 0.329612 1_1:+16728518 None:intergenic
AATCATGAAGGATAGAGATA+TGG 0.342085 1_1:-16728714 None:intergenic
AAGCATCTGGAAATAGGCTT+TGG 0.362433 1_1:-16728358 Msa0011070:CDS
GGCTGAACACGAAAGGAAAA+TGG 0.369681 1_1:+16726856 None:intergenic
TTAGAGGATGTCTTAGAAAA+TGG 0.369795 1_1:-16727971 Msa0011070:CDS
CACGAAAGGAAAATGGCATC+TGG 0.379047 1_1:+16726863 None:intergenic
CAAGAAGTTGATGAGATTAG+AGG 0.380421 1_1:-16727987 Msa0011070:CDS
CATAAATTTCAGGCATTTGA+AGG 0.388813 1_1:-16728035 Msa0011070:intron
GATCTTGGAGGAGGAGAATA+GGG 0.403567 1_1:-16727133 Msa0011070:CDS
ATTAAGGTTGATTGATATGC+TGG 0.409544 1_1:-16728393 Msa0011070:intron
TGCTTATTAGGACAAGATCT+TGG 0.409758 1_1:-16727148 Msa0011070:intron
AGATCTTGGAGGAGGAGAAT+AGG 0.410258 1_1:-16727134 Msa0011070:CDS
ATACGTTTCTCTTGACCATC+TGG 0.418651 1_1:+16727270 None:intergenic
AGCATCTGGAAATAGGCTTT+GGG 0.423971 1_1:-16728357 Msa0011070:CDS
CCTCACTATCCGTGACAAAC+AGG 0.441523 1_1:-16727945 Msa0011070:intron
ATCATGAAGGATAGAGATAT+GGG 0.447296 1_1:-16728713 Msa0011070:CDS
GAGGTAAGATTGAGATCAAG+AGG 0.465455 1_1:-16728688 Msa0011070:CDS
GCAACAAGGTGGGAGAGAAA+TGG 0.476395 1_1:-16726932 Msa0011070:CDS
TTTCAGGCATTTGAAGGGAA+AGG 0.501691 1_1:-16728029 Msa0011070:intron
AAGGATAGAGATATGGGGAG+AGG 0.508916 1_1:-16728707 Msa0011070:CDS
AGAAGGAGCAAAGATGATAG+TGG 0.515974 1_1:+16728565 None:intergenic
TTATTAGGACAAGATCTTGG+AGG 0.534898 1_1:-16727145 Msa0011070:intron
ATAAATTTCAGGCATTTGAA+GGG 0.538213 1_1:-16728034 Msa0011070:intron
CAAGAAAGAGAACGAGGACA+TGG 0.541846 1_1:-16728148 Msa0011070:CDS
TTAGGACAAGATCTTGGAGG+AGG 0.546605 1_1:-16727142 Msa0011070:intron
AGAATAATTACGTGGTAGAA+GGG 0.550111 1_1:+16728519 None:intergenic
AGTAGTGAGTGAAGCTGCAT+AGG 0.580197 1_1:+16726835 None:intergenic
ACGAAAGGAAAATGGCATCT+GGG 0.585200 1_1:+16726864 None:intergenic
CTGCATAGGCTGAACACGAA+AGG 0.591967 1_1:+16726849 None:intergenic
AGGACATGGAAATTAAGCTC+AGG 0.594125 1_1:-16728134 Msa0011070:intron
CCTGTTTGTCACGGATAGTG+AGG 0.614557 1_1:+16727945 None:intergenic
GATGAATTTGATGAGAGTAG+TGG 0.619893 1_1:-16726901 Msa0011070:CDS
AAATGACTACCTGTTTGTCA+CGG 0.628800 1_1:+16727936 None:intergenic
GCAGATGGAAGTATACCAGA+TGG 0.657480 1_1:-16727285 Msa0011070:intron
TCATGAAGGATAGAGATATG+GGG 0.680266 1_1:-16728712 Msa0011070:CDS
GCTTTGGGATGACAAACATG+AGG 0.701004 1_1:-16728342 Msa0011070:intron
GAAACTCAAGAAAGAGAACG+AGG 0.716027 1_1:-16728154 Msa0011070:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTTTTATTTCATGATTTA+TGG - chr1_1:16727058-16727077 Msa0011070:intron 10.0%
!!! ATTAATATATATTTTTTGGT+TGG + chr1_1:16727825-16727844 None:intergenic 10.0%
!!! AATTTTTATTTCATGATTTA+TGG - chr1_1:16727058-16727077 Msa0011070:intron 10.0%
!!! ATTAATATATATTTTTTGGT+TGG + chr1_1:16727825-16727844 None:intergenic 10.0%
!!! ATTTTTGAACATTTTTTTGT+TGG - chr1_1:16727112-16727131 Msa0011070:intron 15.0%
!! GCTAATTTATTGAATTTAAA+AGG - chr1_1:16727644-16727663 Msa0011070:intron 15.0%
!!! TTGAACATTTTTAAAGAAAT+TGG - chr1_1:16727904-16727923 Msa0011070:intron 15.0%
!!! ATTTTTGAACATTTTTTTGT+TGG - chr1_1:16727112-16727131 Msa0011070:intron 15.0%
!! GCTAATTTATTGAATTTAAA+AGG - chr1_1:16727644-16727663 Msa0011070:intron 15.0%
!!! TTGAACATTTTTAAAGAAAT+TGG - chr1_1:16727904-16727923 Msa0011070:intron 15.0%
!! ATTAATGTTATGTTGAACTA+TGG - chr1_1:16727335-16727354 Msa0011070:intron 20.0%
!! GCTAATTATACATAAATTTC+AGG - chr1_1:16727490-16727509 Msa0011070:intron 20.0%
!!! CATTTTTAAAGAAATTGGAT+TGG - chr1_1:16727909-16727928 Msa0011070:intron 20.0%
!! ATTAATGTTATGTTGAACTA+TGG - chr1_1:16727335-16727354 Msa0011070:intron 20.0%
!! GCTAATTATACATAAATTTC+AGG - chr1_1:16727490-16727509 Msa0011070:intron 20.0%
!!! CATTTTTAAAGAAATTGGAT+TGG - chr1_1:16727909-16727928 Msa0011070:intron 20.0%
! ACATATTCAAAGAGAAAAAG+TGG - chr1_1:16726897-16726916 Msa0011070:CDS 25.0%
! CATATTCAAAGAGAAAAAGT+GGG - chr1_1:16726898-16726917 Msa0011070:CDS 25.0%
!! TTTTGTTGGTCATGAAATTA+AGG - chr1_1:16727126-16727145 Msa0011070:CDS 25.0%
!!! TTTCCTTTTTTGAGAGTTTA+TGG - chr1_1:16727255-16727274 Msa0011070:intron 25.0%
!! AAAAGACAAAAGTGTGTTAT+AGG - chr1_1:16727298-16727317 Msa0011070:intron 25.0%
!! AAAGACAAAAGTGTGTTATA+GGG - chr1_1:16727299-16727318 Msa0011070:intron 25.0%
! CCAACTATATATAGTTGAAA+TGG + chr1_1:16727471-16727490 None:intergenic 25.0%
! CCATTTCAACTATATATAGT+TGG - chr1_1:16727468-16727487 Msa0011070:intron 25.0%
! ATAAATTTCAGGCATTTGAA+GGG - chr1_1:16727501-16727520 Msa0011070:intron 25.0%
! ATATTTACATTCACCTCTAA+TGG + chr1_1:16727726-16727745 None:intergenic 25.0%
! TCTAAGAAAGAAAAGACTTT+CGG + chr1_1:16727770-16727789 None:intergenic 25.0%
!!! TTTTGGTTGGAACAAATTTA+AGG + chr1_1:16727812-16727831 None:intergenic 25.0%
!! TTTTTGAACCTTGATTCAAT+TGG - chr1_1:16727945-16727964 Msa0011070:intron 25.0%
! TGGTTCAATCATTGTTTAAA+TGG - chr1_1:16727965-16727984 Msa0011070:CDS 25.0%
! ACATATTCAAAGAGAAAAAG+TGG - chr1_1:16726897-16726916 Msa0011070:CDS 25.0%
! CATATTCAAAGAGAAAAAGT+GGG - chr1_1:16726898-16726917 Msa0011070:CDS 25.0%
!! TTTTGTTGGTCATGAAATTA+AGG - chr1_1:16727126-16727145 Msa0011070:CDS 25.0%
!!! TTTCCTTTTTTGAGAGTTTA+TGG - chr1_1:16727255-16727274 Msa0011070:intron 25.0%
!! AAAAGACAAAAGTGTGTTAT+AGG - chr1_1:16727298-16727317 Msa0011070:intron 25.0%
!! AAAGACAAAAGTGTGTTATA+GGG - chr1_1:16727299-16727318 Msa0011070:intron 25.0%
! CCAACTATATATAGTTGAAA+TGG + chr1_1:16727471-16727490 None:intergenic 25.0%
! CCATTTCAACTATATATAGT+TGG - chr1_1:16727468-16727487 Msa0011070:intron 25.0%
! ATAAATTTCAGGCATTTGAA+GGG - chr1_1:16727501-16727520 Msa0011070:intron 25.0%
! ATATTTACATTCACCTCTAA+TGG + chr1_1:16727726-16727745 None:intergenic 25.0%
! TCTAAGAAAGAAAAGACTTT+CGG + chr1_1:16727770-16727789 None:intergenic 25.0%
!!! TTTTGGTTGGAACAAATTTA+AGG + chr1_1:16727812-16727831 None:intergenic 25.0%
!! TTTTTGAACCTTGATTCAAT+TGG - chr1_1:16727945-16727964 Msa0011070:intron 25.0%
! TGGTTCAATCATTGTTTAAA+TGG - chr1_1:16727965-16727984 Msa0011070:CDS 25.0%
! TATTCATGCATTTTTCCAGA+AGG + chr1_1:16726990-16727009 None:intergenic 30.0%
AGAATAATTACGTGGTAGAA+GGG + chr1_1:16727019-16727038 None:intergenic 30.0%
AAGAATAATTACGTGGTAGA+AGG + chr1_1:16727020-16727039 None:intergenic 30.0%
ACTCAAGAAGAATAATTACG+TGG + chr1_1:16727027-16727046 None:intergenic 30.0%
! ATTAAGGTTGATTGATATGC+TGG - chr1_1:16727142-16727161 Msa0011070:intron 30.0%
!! ATCAAAAAGCATCTGGAAAT+AGG - chr1_1:16727171-16727190 Msa0011070:intron 30.0%
AAGCCATAAACTCTCAAAAA+AGG + chr1_1:16727261-16727280 None:intergenic 30.0%
CATAAATTTCAGGCATTTGA+AGG - chr1_1:16727500-16727519 Msa0011070:intron 30.0%
TTAGAGGATGTCTTAGAAAA+TGG - chr1_1:16727564-16727583 Msa0011070:intron 30.0%
AATTAGCAATGTAGCTAGTT+TGG + chr1_1:16727631-16727650 None:intergenic 30.0%
TCGTGTAAACAATCTTCATT+TGG - chr1_1:16727847-16727866 Msa0011070:intron 30.0%
TAGTGCATATCCATTAAACT+CGG - chr1_1:16727871-16727890 Msa0011070:intron 30.0%
TGATTGAACCAATTGAATCA+AGG + chr1_1:16727956-16727975 None:intergenic 30.0%
ACAATACTTTCGAGATCAAA+TGG - chr1_1:16728108-16728127 Msa0011070:intron 30.0%
TTAGATACATTCACTGATCT+TGG + chr1_1:16728208-16728227 None:intergenic 30.0%
! ACTTTTGTATTTCTTGCAGA+TGG - chr1_1:16728235-16728254 Msa0011070:intron 30.0%
TAGAACTGCAAAACAAGATT+TGG + chr1_1:16728335-16728354 None:intergenic 30.0%
TTGTGCACATATTGCTTATT+AGG - chr1_1:16728375-16728394 Msa0011070:CDS 30.0%
!!! GAGACAATACTCACTTTTTT+TGG - chr1_1:16728455-16728474 Msa0011070:intron 30.0%
! TATTCATGCATTTTTCCAGA+AGG + chr1_1:16726990-16727009 None:intergenic 30.0%
AGAATAATTACGTGGTAGAA+GGG + chr1_1:16727019-16727038 None:intergenic 30.0%
AAGAATAATTACGTGGTAGA+AGG + chr1_1:16727020-16727039 None:intergenic 30.0%
ACTCAAGAAGAATAATTACG+TGG + chr1_1:16727027-16727046 None:intergenic 30.0%
! ATTAAGGTTGATTGATATGC+TGG - chr1_1:16727142-16727161 Msa0011070:intron 30.0%
!! ATCAAAAAGCATCTGGAAAT+AGG - chr1_1:16727171-16727190 Msa0011070:intron 30.0%
AAGCCATAAACTCTCAAAAA+AGG + chr1_1:16727261-16727280 None:intergenic 30.0%
CATAAATTTCAGGCATTTGA+AGG - chr1_1:16727500-16727519 Msa0011070:intron 30.0%
TTAGAGGATGTCTTAGAAAA+TGG - chr1_1:16727564-16727583 Msa0011070:intron 30.0%
AATTAGCAATGTAGCTAGTT+TGG + chr1_1:16727631-16727650 None:intergenic 30.0%
TCGTGTAAACAATCTTCATT+TGG - chr1_1:16727847-16727866 Msa0011070:intron 30.0%
TAGTGCATATCCATTAAACT+CGG - chr1_1:16727871-16727890 Msa0011070:intron 30.0%
TGATTGAACCAATTGAATCA+AGG + chr1_1:16727956-16727975 None:intergenic 30.0%
ACAATACTTTCGAGATCAAA+TGG - chr1_1:16728108-16728127 Msa0011070:intron 30.0%
TTAGATACATTCACTGATCT+TGG + chr1_1:16728208-16728227 None:intergenic 30.0%
! ACTTTTGTATTTCTTGCAGA+TGG - chr1_1:16728235-16728254 Msa0011070:intron 30.0%
TAGAACTGCAAAACAAGATT+TGG + chr1_1:16728335-16728354 None:intergenic 30.0%
TTGTGCACATATTGCTTATT+AGG - chr1_1:16728375-16728394 Msa0011070:CDS 30.0%
!!! GAGACAATACTCACTTTTTT+TGG - chr1_1:16728455-16728474 Msa0011070:intron 30.0%
!! GAGAGATATCAAAAAGCATC+TGG - chr1_1:16727164-16727183 Msa0011070:intron 35.0%
GATGACAAACATGAGGTATA+AGG - chr1_1:16727200-16727219 Msa0011070:intron 35.0%
!! CAAGAAGTTGATGAGATTAG+AGG - chr1_1:16727548-16727567 Msa0011070:intron 35.0%
AAATGACTACCTGTTTGTCA+CGG + chr1_1:16727602-16727621 None:intergenic 35.0%
AGGCTACTTATTTGATCTAG+TGG - chr1_1:16727664-16727683 Msa0011070:intron 35.0%
AGTGGTAAAAAGACAAGTCT+TGG - chr1_1:16727682-16727701 Msa0011070:intron 35.0%
CTCTAATGGAGCTCAAATTT+CGG + chr1_1:16727712-16727731 None:intergenic 35.0%
! GTCTTTTCTTTCTTAGACTG+AGG - chr1_1:16727773-16727792 Msa0011070:intron 35.0%
! ACAAATTTAAGGTGAGGAGA+TGG + chr1_1:16727801-16727820 None:intergenic 35.0%
! GTTGGAACAAATTTAAGGTG+AGG + chr1_1:16727807-16727826 None:intergenic 35.0%
TAGAGATACACCGAGTTTAA+TGG + chr1_1:16727884-16727903 None:intergenic 35.0%
!! ATCTCGAAAGTATTGTAGTC+TGG + chr1_1:16728104-16728123 None:intergenic 35.0%
AAATGGATCGACAAATTGAC+TGG - chr1_1:16728125-16728144 Msa0011070:intron 35.0%
CTGATCTTGGCTACTATATT+GGG + chr1_1:16728195-16728214 None:intergenic 35.0%
ACTGATCTTGGCTACTATAT+TGG + chr1_1:16728196-16728215 None:intergenic 35.0%
TGCTTATTAGGACAAGATCT+TGG - chr1_1:16728387-16728406 Msa0011070:CDS 35.0%
TTATTAGGACAAGATCTTGG+AGG - chr1_1:16728390-16728409 Msa0011070:CDS 35.0%
! GGAACTTAATTTTATCCTCG+AGG - chr1_1:16728423-16728442 Msa0011070:intron 35.0%
GATGAATTTGATGAGAGTAG+TGG - chr1_1:16728634-16728653 Msa0011070:CDS 35.0%
!! GAGAGATATCAAAAAGCATC+TGG - chr1_1:16727164-16727183 Msa0011070:intron 35.0%
GATGACAAACATGAGGTATA+AGG - chr1_1:16727200-16727219 Msa0011070:intron 35.0%
!! CAAGAAGTTGATGAGATTAG+AGG - chr1_1:16727548-16727567 Msa0011070:intron 35.0%
AAATGACTACCTGTTTGTCA+CGG + chr1_1:16727602-16727621 None:intergenic 35.0%
AGGCTACTTATTTGATCTAG+TGG - chr1_1:16727664-16727683 Msa0011070:intron 35.0%
AGTGGTAAAAAGACAAGTCT+TGG - chr1_1:16727682-16727701 Msa0011070:intron 35.0%
CTCTAATGGAGCTCAAATTT+CGG + chr1_1:16727712-16727731 None:intergenic 35.0%
! GTCTTTTCTTTCTTAGACTG+AGG - chr1_1:16727773-16727792 Msa0011070:intron 35.0%
! ACAAATTTAAGGTGAGGAGA+TGG + chr1_1:16727801-16727820 None:intergenic 35.0%
! GTTGGAACAAATTTAAGGTG+AGG + chr1_1:16727807-16727826 None:intergenic 35.0%
TAGAGATACACCGAGTTTAA+TGG + chr1_1:16727884-16727903 None:intergenic 35.0%
!! ATCTCGAAAGTATTGTAGTC+TGG + chr1_1:16728104-16728123 None:intergenic 35.0%
AAATGGATCGACAAATTGAC+TGG - chr1_1:16728125-16728144 Msa0011070:intron 35.0%
CTGATCTTGGCTACTATATT+GGG + chr1_1:16728195-16728214 None:intergenic 35.0%
ACTGATCTTGGCTACTATAT+TGG + chr1_1:16728196-16728215 None:intergenic 35.0%
TGCTTATTAGGACAAGATCT+TGG - chr1_1:16728387-16728406 Msa0011070:CDS 35.0%
TTATTAGGACAAGATCTTGG+AGG - chr1_1:16728390-16728409 Msa0011070:CDS 35.0%
! GGAACTTAATTTTATCCTCG+AGG - chr1_1:16728423-16728442 Msa0011070:intron 35.0%
GATGAATTTGATGAGAGTAG+TGG - chr1_1:16728634-16728653 Msa0011070:CDS 35.0%
GAGGTAAGATTGAGATCAAG+AGG - chr1_1:16726847-16726866 Msa0011070:CDS 40.0%
AGAAGGAGCAAAGATGATAG+TGG + chr1_1:16726973-16726992 None:intergenic 40.0%
ACTATCATCTTTGCTCCTTC+TGG - chr1_1:16726972-16726991 Msa0011070:intron 40.0%
AAGCATCTGGAAATAGGCTT+TGG - chr1_1:16727177-16727196 Msa0011070:intron 40.0%
AGCATCTGGAAATAGGCTTT+GGG - chr1_1:16727178-16727197 Msa0011070:intron 40.0%
GAAACTCAAGAAAGAGAACG+AGG - chr1_1:16727381-16727400 Msa0011070:intron 40.0%
AGGACATGGAAATTAAGCTC+AGG - chr1_1:16727401-16727420 Msa0011070:intron 40.0%
TTTCAGGCATTTGAAGGGAA+AGG - chr1_1:16727506-16727525 Msa0011070:intron 40.0%
GGTAAAAAGACAAGTCTTGG+AGG - chr1_1:16727685-16727704 Msa0011070:intron 40.0%
CGAAATTTGAGCTCCATTAG+AGG - chr1_1:16727710-16727729 Msa0011070:intron 40.0%
! TCGACAAATTGACTGGTTCA+TGG - chr1_1:16728132-16728151 Msa0011070:intron 40.0%
ATACGTTTCTCTTGACCATC+TGG + chr1_1:16728268-16728287 None:intergenic 40.0%
GGTCAAGAGAAACGTATGTT+TGG - chr1_1:16728271-16728290 Msa0011070:intron 40.0%
!! TTCACTTTTCAGCAGCAACA+AGG - chr1_1:16728589-16728608 Msa0011070:CDS 40.0%
ACGAAAGGAAAATGGCATCT+GGG + chr1_1:16728674-16728693 None:intergenic 40.0%
GAGGTAAGATTGAGATCAAG+AGG - chr1_1:16726847-16726866 Msa0011070:CDS 40.0%
AGAAGGAGCAAAGATGATAG+TGG + chr1_1:16726973-16726992 None:intergenic 40.0%
ACTATCATCTTTGCTCCTTC+TGG - chr1_1:16726972-16726991 Msa0011070:intron 40.0%
AAGCATCTGGAAATAGGCTT+TGG - chr1_1:16727177-16727196 Msa0011070:intron 40.0%
AGCATCTGGAAATAGGCTTT+GGG - chr1_1:16727178-16727197 Msa0011070:intron 40.0%
GAAACTCAAGAAAGAGAACG+AGG - chr1_1:16727381-16727400 Msa0011070:intron 40.0%
AGGACATGGAAATTAAGCTC+AGG - chr1_1:16727401-16727420 Msa0011070:intron 40.0%
TTTCAGGCATTTGAAGGGAA+AGG - chr1_1:16727506-16727525 Msa0011070:intron 40.0%
GGTAAAAAGACAAGTCTTGG+AGG - chr1_1:16727685-16727704 Msa0011070:intron 40.0%
CGAAATTTGAGCTCCATTAG+AGG - chr1_1:16727710-16727729 Msa0011070:intron 40.0%
! TCGACAAATTGACTGGTTCA+TGG - chr1_1:16728132-16728151 Msa0011070:intron 40.0%
ATACGTTTCTCTTGACCATC+TGG + chr1_1:16728268-16728287 None:intergenic 40.0%
GGTCAAGAGAAACGTATGTT+TGG - chr1_1:16728271-16728290 Msa0011070:intron 40.0%
!! TTCACTTTTCAGCAGCAACA+AGG - chr1_1:16728589-16728608 Msa0011070:CDS 40.0%
ACGAAAGGAAAATGGCATCT+GGG + chr1_1:16728674-16728693 None:intergenic 40.0%
AAGGATAGAGATATGGGGAG+AGG - chr1_1:16726828-16726847 Msa0011070:CDS 45.0%
!! GCTTTGGGATGACAAACATG+AGG - chr1_1:16727193-16727212 Msa0011070:intron 45.0%
CAAGAAAGAGAACGAGGACA+TGG - chr1_1:16727387-16727406 Msa0011070:intron 45.0%
! GCAGATGGAAGTATACCAGA+TGG - chr1_1:16728250-16728269 Msa0011070:intron 45.0%
TTAGGACAAGATCTTGGAGG+AGG - chr1_1:16728393-16728412 Msa0011070:intron 45.0%
AGATCTTGGAGGAGGAGAAT+AGG - chr1_1:16728401-16728420 Msa0011070:intron 45.0%
GATCTTGGAGGAGGAGAATA+GGG - chr1_1:16728402-16728421 Msa0011070:intron 45.0%
! ACTTTTCAGCAGCAACAAGG+TGG - chr1_1:16728592-16728611 Msa0011070:CDS 45.0%
! CTTTTCAGCAGCAACAAGGT+GGG - chr1_1:16728593-16728612 Msa0011070:CDS 45.0%
CACGAAAGGAAAATGGCATC+TGG + chr1_1:16728675-16728694 None:intergenic 45.0%
GGCTGAACACGAAAGGAAAA+TGG + chr1_1:16728682-16728701 None:intergenic 45.0%
AGTAGTGAGTGAAGCTGCAT+AGG + chr1_1:16728703-16728722 None:intergenic 45.0%
AAGGATAGAGATATGGGGAG+AGG - chr1_1:16726828-16726847 Msa0011070:CDS 45.0%
!! GCTTTGGGATGACAAACATG+AGG - chr1_1:16727193-16727212 Msa0011070:intron 45.0%
CAAGAAAGAGAACGAGGACA+TGG - chr1_1:16727387-16727406 Msa0011070:intron 45.0%
! GCAGATGGAAGTATACCAGA+TGG - chr1_1:16728250-16728269 Msa0011070:intron 45.0%
TTAGGACAAGATCTTGGAGG+AGG - chr1_1:16728393-16728412 Msa0011070:intron 45.0%
AGATCTTGGAGGAGGAGAAT+AGG - chr1_1:16728401-16728420 Msa0011070:intron 45.0%
GATCTTGGAGGAGGAGAATA+GGG - chr1_1:16728402-16728421 Msa0011070:intron 45.0%
! ACTTTTCAGCAGCAACAAGG+TGG - chr1_1:16728592-16728611 Msa0011070:CDS 45.0%
! CTTTTCAGCAGCAACAAGGT+GGG - chr1_1:16728593-16728612 Msa0011070:CDS 45.0%
CACGAAAGGAAAATGGCATC+TGG + chr1_1:16728675-16728694 None:intergenic 45.0%
GGCTGAACACGAAAGGAAAA+TGG + chr1_1:16728682-16728701 None:intergenic 45.0%
AGTAGTGAGTGAAGCTGCAT+AGG + chr1_1:16728703-16728722 None:intergenic 45.0%
!!! TTATTTTTTAATTTATAACA+AGG + chr1_1:16727447-16727466 None:intergenic 5.0%
!!! GATTATTAATATATATTTTT+TGG + chr1_1:16727829-16727848 None:intergenic 5.0%
!!! TATAATTTTGATTAAAAAAA+AGG - chr1_1:16728541-16728560 Msa0011070:CDS 5.0%
!!! TTATTTTTTAATTTATAACA+AGG + chr1_1:16727447-16727466 None:intergenic 5.0%
!!! GATTATTAATATATATTTTT+TGG + chr1_1:16727829-16727848 None:intergenic 5.0%
!!! TATAATTTTGATTAAAAAAA+AGG - chr1_1:16728541-16728560 Msa0011070:CDS 5.0%
CCTGTTTGTCACGGATAGTG+AGG + chr1_1:16727593-16727612 None:intergenic 50.0%
CCTCACTATCCGTGACAAAC+AGG - chr1_1:16727590-16727609 Msa0011070:intron 50.0%
TGTCTCAAAGCTGTACCTCG+AGG + chr1_1:16728441-16728460 None:intergenic 50.0%
GCAACAAGGTGGGAGAGAAA+TGG - chr1_1:16728603-16728622 Msa0011070:CDS 50.0%
CTGCATAGGCTGAACACGAA+AGG + chr1_1:16728689-16728708 None:intergenic 50.0%
CCTGTTTGTCACGGATAGTG+AGG + chr1_1:16727593-16727612 None:intergenic 50.0%
CCTCACTATCCGTGACAAAC+AGG - chr1_1:16727590-16727609 Msa0011070:intron 50.0%
TGTCTCAAAGCTGTACCTCG+AGG + chr1_1:16728441-16728460 None:intergenic 50.0%
GCAACAAGGTGGGAGAGAAA+TGG - chr1_1:16728603-16728622 Msa0011070:CDS 50.0%
CTGCATAGGCTGAACACGAA+AGG + chr1_1:16728689-16728708 None:intergenic 50.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 16726825 16728732 16726825 ID=Msa0011070;Name=Msa0011070
chr1_1 mRNA 16726825 16728732 16726825 ID=Msa0011070-mRNA-1;Parent=Msa0011070;Name=Msa0011070-mRNA-1;_AED=0.31;_eAED=0.31;_QI=0|0|0|0.57|1|1|7|0|213
chr1_1 exon 16728530 16728732 16728530 ID=Msa0011070-mRNA-1:exon:6110;Parent=Msa0011070-mRNA-1
chr1_1 exon 16728343 16728409 16728343 ID=Msa0011070-mRNA-1:exon:6109;Parent=Msa0011070-mRNA-1
chr1_1 exon 16728135 16728196 16728135 ID=Msa0011070-mRNA-1:exon:6108;Parent=Msa0011070-mRNA-1
chr1_1 exon 16727946 16728045 16727946 ID=Msa0011070-mRNA-1:exon:6107;Parent=Msa0011070-mRNA-1
chr1_1 exon 16727274 16727303 16727274 ID=Msa0011070-mRNA-1:exon:6106;Parent=Msa0011070-mRNA-1
chr1_1 exon 16727113 16727160 16727113 ID=Msa0011070-mRNA-1:exon:6105;Parent=Msa0011070-mRNA-1
chr1_1 exon 16726825 16726956 16726825 ID=Msa0011070-mRNA-1:exon:6104;Parent=Msa0011070-mRNA-1
chr1_1 CDS 16728530 16728732 16728530 ID=Msa0011070-mRNA-1:cds;Parent=Msa0011070-mRNA-1
chr1_1 CDS 16728343 16728409 16728343 ID=Msa0011070-mRNA-1:cds;Parent=Msa0011070-mRNA-1
chr1_1 CDS 16728135 16728196 16728135 ID=Msa0011070-mRNA-1:cds;Parent=Msa0011070-mRNA-1
chr1_1 CDS 16727946 16728045 16727946 ID=Msa0011070-mRNA-1:cds;Parent=Msa0011070-mRNA-1
chr1_1 CDS 16727274 16727303 16727274 ID=Msa0011070-mRNA-1:cds;Parent=Msa0011070-mRNA-1
chr1_1 CDS 16727113 16727160 16727113 ID=Msa0011070-mRNA-1:cds;Parent=Msa0011070-mRNA-1
chr1_1 CDS 16726825 16726956 16726825 ID=Msa0011070-mRNA-1:cds;Parent=Msa0011070-mRNA-1
Gene Sequence

>Msa0011070

ATGAAGGATAGAGATATGGGGAGAGGTAAGATTGAGATCAAGAGGATTGAGAACTCAAGCAACAGACAAGTTACATATTCAAAGAGAAAAAGTGGGATTTTAAAGAAAGCTAACGAAATCAATGTTCTATGTGATGCTCAAGTTTCCACTATCATCTTTGCTCCTTCTGGAAAAATGCATGAATACATTAGCCCTTCTACCACGTTGATTGATATGCTGGAGAGATATCAAAAAGCATCTGGAAATAGGCTTTGGGATGACAAACATGAGAACTTAAAGAATGAAATTGAGAAACTCAAGAAAGAGAACGAGGACATGGAAATTAAGCTCAGGCATTTGAAGGGAAAGGATATCAACACACTAAACTACAAGAAGTTGATGAGATTAGAGGATGTCTTAGAAAATGGTCTCCTCACTATCCGTGACAAACAGATGGAAGTATACCAGATGGTCAAGAGAAACGACAAGATCTTGGAGGAGGAGAATAGGGAACTTAATTTTATCCTCGAGCAGCAACAAGGTGGGAGAGAAATGGATTATAATGATGAATTTGATGAGAGTAGTGGAAGTGATTTCAATTCCCAGATGCCATTTTCCTTTCGTGTTCAGCCTATGCAGCTTCACTCACTACTTCAGCTTTAA
Protein sequence

>Msa0011070

MKDRDMGRGKIEIKRIENSSNRQVTYSKRKSGILKKANEINVLCDAQVSTIIFAPSGKMHEYISPSTTLIDMLERYQKASGNRLWDDKHENLKNEIEKLKKENEDMEIKLRHLKGKDINTLNYKKLMRLEDVLENGLLTIRDKQMEVYQMVKRNDKILEEENRELNFILEQQQGGREMDYNDEFDESSGSDFNSQMPFSFRVQPMQLHSLLQL*