AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0013740

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0013740 MtrunA17_Chr1g0163251 67.718 412 42 4 536 888 13 392 8.93e-177 517
Msa0013740 MtrunA17_Chr1g0163251 58.358 341 110 7 1 321 1 329 3.84e-121 373
Msa0013740 MtrunA17_Chr1g0163251 60.741 135 50 2 318 450 157 290 2.06e-44 165
Msa0013740 MtrunA17_Chr1g0163251 64.634 82 29 0 815 896 285 366 5.26e-25 108
Msa0013740 MtrunA17_Chr1g0163181 42.283 473 195 10 1 439 1 429 7.57e-106 335
Msa0013740 MtrunA17_Chr1g0163181 35.590 458 172 13 536 916 13 424 3.14e-71 242
Msa0013740 MtrunA17_Chr1g0163181 45.977 261 106 4 311 542 168 422 5.29e-62 217
Msa0013740 MtrunA17_Chr1g0163261 49.032 310 120 5 1 285 1 297 3.72e-87 280
Msa0013740 MtrunA17_Chr1g0163261 37.589 282 111 4 537 758 18 294 5.26e-49 176
Msa0013740 MtrunA17_Chr1g0163261 53.793 145 60 3 315 453 153 296 2.63e-38 145
Msa0013740 MtrunA17_Chr1g0163201 51.536 293 96 6 20 281 18 295 2.80e-82 271
Msa0013740 MtrunA17_Chr1g0163201 57.589 224 88 4 323 542 165 385 7.83e-73 245
Msa0013740 MtrunA17_Chr1g0163201 35.938 448 135 10 543 916 18 387 1.26e-62 217
Msa0013740 MtrunA17_Chr1g0163151 56.757 222 86 4 323 542 1 214 1.07e-71 236
Msa0013740 MtrunA17_Chr1g0163151 32.986 288 123 10 153 438 1 220 1.77e-31 122
Msa0013740 MtrunA17_Chr1g0163151 31.944 288 103 8 649 916 2 216 2.03e-31 122
Msa0013740 MtrunA17_Chr1g0163231 46.644 298 117 9 1 273 1 281 7.42e-71 236
Msa0013740 MtrunA17_Chr1g0163231 39.194 273 95 7 537 748 18 280 2.18e-47 171
Msa0013740 MtrunA17_Chr1g0163231 55.118 127 47 4 322 442 159 281 6.30e-33 129
Msa0013740 MtrunA17_Chr1g0171611 46.309 298 106 9 1 273 1 269 1.46e-67 227
Msa0013740 MtrunA17_Chr1g0171611 40.441 272 81 6 537 748 18 268 3.09e-46 167
Msa0013740 MtrunA17_Chr1g0171611 52.212 113 47 4 336 442 158 269 1.57e-28 116
Msa0013740 MtrunA17_Chr1g0163241 71.341 164 22 3 1 147 7 162 8.37e-66 218
Msa0013740 MtrunA17_Chr1g0163241 47.183 142 32 4 543 642 22 162 4.19e-26 105
Msa0013740 MtrunA17_Chr1g0163111 50.000 230 96 4 323 542 1 221 3.05e-63 213
Msa0013740 MtrunA17_Chr1g0163111 32.180 289 131 8 153 438 1 227 1.30e-33 129
Msa0013740 MtrunA17_Chr1g0163111 31.930 285 111 9 652 916 2 223 1.60e-30 120
Msa0013740 MtrunA17_Chr1g0163191 59.748 159 39 3 1 135 1 158 1.10e-45 161
Msa0013740 MtrunA17_Chr1g0163191 40.411 146 36 2 536 630 13 158 6.77e-22 93.6
Msa0013740 MtrunA17_Chr6g0476171 42.128 235 119 9 317 538 4 234 4.95e-42 154
Msa0013740 MtrunA17_Chr6g0476171 41.844 141 75 3 149 282 6 146 6.27e-26 107
Msa0013740 MtrunA17_Chr6g0476171 29.932 294 116 11 650 917 12 241 1.98e-19 89.0
Msa0013740 MtrunA17_Chr1g0162151 39.256 242 121 6 323 561 1 219 1.08e-38 143
Msa0013740 MtrunA17_Chr1g0162151 52.239 134 62 1 153 286 1 132 1.81e-34 131
Msa0013740 MtrunA17_Chr1g0162151 42.308 130 56 1 650 760 3 132 1.49e-22 97.1
Msa0013740 MtrunA17_Chr1g0163091 52.239 134 64 0 153 286 1 134 1.19e-36 135
Msa0013740 MtrunA17_Chr1g0163091 53.846 130 57 2 323 450 1 129 1.20e-35 132
Msa0013740 MtrunA17_Chr1g0163091 42.308 130 56 1 650 760 3 132 3.39e-25 102
Msa0013740 MtrunA17_Chr8g0390841 22.811 491 291 14 14 438 48 516 4.20e-22 101
Msa0013740 MtrunA17_Chr1g0163221 30.137 292 160 12 9 269 11 289 1.08e-20 95.1
Msa0013740 MtrunA17_Chr1g0163221 29.187 209 91 9 344 544 195 354 6.98e-13 71.2
Msa0013740 MtrunA17_Chr4g0067431 27.187 320 184 11 9 289 15 324 8.88e-19 88.6
Msa0013740 MtrunA17_Chr7g0233561 30.619 307 153 13 9 269 18 310 1.19e-18 88.2
Msa0013740 MtrunA17_Chr3g0131891 28.231 294 167 10 9 269 19 301 9.31e-18 85.9
Msa0013740 MtrunA17_Chr1g0163131 25.436 287 171 11 14 267 27 303 3.72e-17 83.6
Msa0013740 MtrunA17_Chr1g0163131 52.174 69 29 2 475 541 232 298 3.41e-13 71.6
Msa0013740 MtrunA17_Chr1g0208771 24.524 473 283 17 20 442 12 460 5.17e-16 82.0
Msa0013740 MtrunA17_Chr1g0163101 34.437 151 76 4 14 147 26 170 6.78e-16 76.6
Msa0013740 MtrunA17_Chr5g0419211 42.708 96 52 2 193 287 11 104 1.84e-15 73.2
Msa0013740 MtrunA17_Chr5g0419211 39.535 86 49 2 364 446 11 96 1.34e-12 65.1
Msa0013740 MtrunA17_Chr7g0233541 26.578 301 145 11 21 269 2 278 2.82e-15 77.8
Msa0013740 MtrunA17_Chr7g0233521 26.690 281 153 8 21 269 2 261 7.55e-15 76.3
Msa0013740 MtrunA17_Chr3g0103171 24.000 275 169 8 20 269 5 264 1.26e-14 75.1
Msa0013740 MtrunA17_Chr3g0103181 23.571 280 178 5 9 267 12 276 1.74e-14 75.1
Msa0013740 MtrunA17_Chr7g0233531 26.740 273 163 6 21 269 2 261 8.46e-14 72.8
Msa0013740 MtrunA17_Chr1g0162161 32.639 144 76 4 21 147 4 143 2.03e-13 68.9
Msa0013740 MtrunA17_Chr1g0163071 25.828 302 153 9 21 269 2 285 3.90e-13 71.2
Msa0013740 MtrunA17_Chr3g0103191 26.609 233 130 7 9 215 12 229 5.40e-13 70.1
Msa0013740 MtrunA17_Chr5g0419201 32.031 128 65 2 14 119 25 152 1.68e-12 67.4
Msa0013740 MtrunA17_Chr6g0476181 31.373 153 78 4 21 147 2 153 6.67e-12 64.7
Msa0013740 MtrunA17_Chr1g0163141 30.935 139 66 4 17 130 7 140 3.15e-11 63.5
Msa0013740 MtrunA17_Chr1g0163121 37.931 87 36 2 19 88 9 94 9.07e-11 60.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 159 sgRNAs with CRISPR-Local

Find 1184 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTGTTCAACAACAAATATTT+TGG 0.124741 1_1:+21194508 Msa0013740:CDS
GAACACCATTTGGGAATTTA+AGG 0.129045 1_1:-21194491 None:intergenic
GTGTTCAACAAGCAATATTT+TGG 0.179684 1_1:+21187774 Msa0013740:CDS
TGTTTCAAGGTTAAGATATT+TGG 0.182176 1_1:+21187899 Msa0013740:CDS
TATTTCAAGGTTAAGATATT+TGG 0.184615 1_1:+21194633 Msa0013740:intron
TAAAGGTTGGATGAAATTTA+TGG 0.188069 1_1:+21203916 Msa0013740:intron
AAACTCTCTGGAGTTGAAAA+TGG 0.208119 1_1:+21191791 Msa0013740:CDS
CCATGGGAAGCATGCTCTTT+TGG 0.216932 1_1:-21196524 None:intergenic
CCCTGAAGAGCATGCACTTT+TGG 0.222036 1_1:-21196040 None:intergenic
AAGAACTCACCTGAGAATTT+TGG 0.224542 1_1:-21188121 None:intergenic
AGAAGTTTGTGGAGAACTTT+TGG 0.232603 1_1:+21187711 Msa0013740:CDS
TCCAAAAGTGCATGCTCTTC+AGG 0.235087 1_1:+21196039 Msa0013740:CDS
TTTGGGAATTTAAGGAATAT+TGG 0.244109 1_1:-21194483 None:intergenic
GAGCTTGATTGCTCCCTTGA+TGG 0.247315 1_1:-21189510 None:intergenic
TTTGGGAATTGAAGGAATAT+TGG 0.249785 1_1:-21187749 None:intergenic
CTTAGGGTTTGGTCCCTTGA+TGG 0.254887 1_1:-21195449 None:intergenic
CCTTGAAGAGAATGCACTTT+TGG 0.259248 1_1:-21195658 None:intergenic
GCACACTTGAACAAATTTAA+AGG 0.264956 1_1:+21189297 Msa0013740:CDS
GCACACTTGAACAAATTTAA+TGG 0.268085 1_1:+21190720 Msa0013740:CDS
GAAGAATGCAAAGTGGAAAT+TGG 0.278956 1_1:+21203938 Msa0013740:CDS
AAAGTTCTCCACAAACTTCT+TGG 0.281295 1_1:-21187708 None:intergenic
TGGAGAGTAATGGTGATATT+TGG 0.287546 1_1:+21187798 Msa0013740:CDS
TTCTTCAACAGATTTGATAT+TGG 0.289555 1_1:-21187948 None:intergenic
ACGATAGTATTCATGGTTAT+AGG 0.290213 1_1:+21191847 Msa0013740:CDS
AGAAATATGTGGAGAGATAT+TGG 0.299308 1_1:+21194445 Msa0013740:CDS
AAGCTTGGTTGCTCCCTTGA+TGG 0.305403 1_1:-21190933 None:intergenic
ATTTGTTGTTGAACACCATT+TGG 0.305917 1_1:-21194501 None:intergenic
TTGGGAATTTAAGGAATATT+GGG 0.309746 1_1:-21194482 None:intergenic
CCAAAAGTGCATTCTCTTCA+AGG 0.315162 1_1:+21195658 Msa0013740:CDS
CAATATTATCCTATGAAAAT+CGG 0.317709 1_1:-21187550 None:intergenic
ATATCTCTCCACATATTTCT+TGG 0.318941 1_1:-21194442 None:intergenic
AAGGATTTGAAGGAACTTCT+AGG 0.319754 1_1:+21189710 Msa0013740:CDS
ATTGCTTGTTGAACACCATT+TGG 0.328864 1_1:-21187767 None:intergenic
TTGGGAATTGAAGGAATATT+GGG 0.332157 1_1:-21187748 None:intergenic
CCTTGTAGAGCGTGCACTTT+GGG 0.333155 1_1:-21195849 None:intergenic
CACACTTGAACAAATTTAAT+GGG 0.346218 1_1:+21190721 Msa0013740:CDS
CCTTGCAACTTCTTAGGGTT+TGG 0.347894 1_1:-21195460 None:intergenic
AATTATTACGATAGTATTCA+TGG 0.354510 1_1:+21191840 Msa0013740:CDS
GTTATCATTTGAGCTTCCTT+TGG 0.355140 1_1:-21194765 None:intergenic
AAGACACTGGAGAAACTTAT+AGG 0.369392 1_1:+21195820 Msa0013740:CDS
CACACTTGAACAAATTTAAA+GGG 0.370401 1_1:+21189298 Msa0013740:CDS
TATAAAGAAGGGATCTCTTC+TGG 0.374152 1_1:+21195583 Msa0013740:CDS
TATAAAGAAGGGATCTCTTC+TGG 0.374152 1_1:+21195965 Msa0013740:CDS
TTGCTTGTTGAACACCATTT+GGG 0.398115 1_1:-21187766 None:intergenic
GAAGCTCAAATGATAACAAA+TGG 0.398449 1_1:+21194771 Msa0013740:CDS
ATAGTTTATTTCTAAAGTAT+TGG 0.406626 1_1:-21187924 None:intergenic
TATCTCTCCACATATTTCTT+GGG 0.407919 1_1:-21194441 None:intergenic
AACTCTCTGGAGTTGAAAAT+GGG 0.410653 1_1:+21191792 Msa0013740:CDS
CTCTCATTAACAACTTCAAC+TGG 0.412647 1_1:-21190483 None:intergenic
AATATTATCCTATGAAAATC+GGG 0.414910 1_1:-21187549 None:intergenic
CTCTCATTAACAACTTCAAC+TGG 0.420982 1_1:-21189053 None:intergenic
AAGTTCTCCACAAACTTCTT+GGG 0.422395 1_1:-21187707 None:intergenic
CCAAAGGAGTTTATGAAAAG+AGG 0.438669 1_1:+21191759 Msa0013740:CDS
GAACACCATTTGGGAATTGA+AGG 0.440819 1_1:-21187757 None:intergenic
AAAGAATGCAAAGTGGAGAT+TGG 0.446068 1_1:+21191897 Msa0013740:CDS
CCAAAGAGAAAAGGATTTGA+AGG 0.447001 1_1:+21189700 Msa0013740:CDS
AAGACACTGGCGAAACTTGT+AGG 0.451011 1_1:+21196011 Msa0013740:CDS
AGGAAGTCATGAAAACTCTC+TGG 0.451275 1_1:+21191779 Msa0013740:CDS
CTTTCAAGAAGATGATTTGT+TGG 0.452264 1_1:-21189739 None:intergenic
CCAAAAGTGCATGCTCTTCA+GGG 0.454566 1_1:+21196040 Msa0013740:CDS
TTTGTTGTTGAACACCATTT+GGG 0.454830 1_1:-21194500 None:intergenic
GACTTACCATCCTGCATCCA+TGG 0.457913 1_1:-21189127 None:intergenic
CTTGTGATAAGAATATTCTA+TGG 0.462547 1_1:+21196468 Msa0013740:CDS
GTTATAGGTTCTCTGAAGGT+TGG 0.464034 1_1:+21191862 Msa0013740:CDS
GATATTAATTTCTTTAAGCT+TGG 0.469147 1_1:-21190948 None:intergenic
CCATGACAAGGTTATAAAGA+AGG 0.469658 1_1:+21195953 Msa0013740:intron
CTTGTCCTTTGAGCTTGGGT+GGG 0.470047 1_1:-21188052 None:intergenic
TTTCAAGAAGATGATTTGTT+GGG 0.470648 1_1:-21189738 None:intergenic
TTGTTATTATTACTCCATCA+AGG 0.474458 1_1:+21189496 Msa0013740:CDS
TCTTCTAATTCTATGACTAC+TGG 0.476068 1_1:+21195322 Msa0013740:CDS
AGAAGATCTCTTGTGACTAC+TGG 0.477196 1_1:+21190810 Msa0013740:intron
TACTATTACTAAAGCCATCA+AGG 0.479367 1_1:+21195435 Msa0013740:CDS
GAGGATTCCCAAGAAGTTTG+TGG 0.481201 1_1:+21187700 Msa0013740:intron
CATAGGTGGATCATGTTTCA+AGG 0.482029 1_1:+21187886 Msa0013740:intron
TCTTGTCCTTTGAGCTTGGG+TGG 0.484511 1_1:-21188053 None:intergenic
CTTAAGAGTTGGTGAGGACA+TGG 0.490886 1_1:+21190752 Msa0013740:CDS
CCATGAGAAGGTTATAAAGA+AGG 0.491612 1_1:+21195571 Msa0013740:intron
CCATGACAAGGTTATAAAGA+AGG 0.491612 1_1:+21196437 Msa0013740:intron
AATCTTACGCCCATGGATGC+AGG 0.492072 1_1:+21189117 Msa0013740:CDS
CCCAAAGTGCACGCTCTACA+AGG 0.495527 1_1:+21195849 Msa0013740:CDS
CCGTTACTATTACTCCATCA+AGG 0.499776 1_1:+21190919 Msa0013740:CDS
GTAGAGCGTGCACTTTGGGA+AGG 0.501037 1_1:-21195845 None:intergenic
CATGACAAGGTTATAAAGAA+GGG 0.502514 1_1:+21195954 Msa0013740:intron
ATATTCCTTAAATTCCCAAA+TGG 0.509356 1_1:+21194486 Msa0013740:CDS
GGTGATAATCCAAAGAGAAA+AGG 0.509436 1_1:+21189691 Msa0013740:CDS
ATAGTAATAGTGAATAAAAG+TGG 0.509655 1_1:-21195418 None:intergenic
GGGATTGCAAACTTAAGAGT+TGG 0.509708 1_1:+21189318 Msa0013740:CDS
AAGCTCAAATGATAACAAAT+GGG 0.514121 1_1:+21194772 Msa0013740:CDS
ATATTCCTTCAATTCCCAAA+TGG 0.516176 1_1:+21187752 Msa0013740:CDS
CAATTACCAGGTTATAAAGA+AGG 0.517705 1_1:+21189655 Msa0013740:intron
GGGATTGCAAACTTAAGAGT+TGG 0.522576 1_1:+21190741 Msa0013740:CDS
ACCTTGTAGAGCGTGCACTT+TGG 0.524700 1_1:-21195850 None:intergenic
AAGACAATGGAGAAACATCT+AGG 0.526739 1_1:+21196495 Msa0013740:CDS
AAGACACCGGAGAAACTTGT+AGG 0.528399 1_1:+21195629 Msa0013740:CDS
GGGATTGCAAGCTTAAGAGT+TGG 0.529065 1_1:+21195253 Msa0013740:intron
ATAATAACAAGAAATGAAAG+TGG 0.535068 1_1:-21189483 None:intergenic
CATGAGAAGGTTATAAAGAA+GGG 0.535802 1_1:+21195572 Msa0013740:intron
ACTACCCAGCCAAAATTCTC+AGG 0.537063 1_1:+21188112 Msa0013740:CDS
TTACCAACATATTGCTGCCA+TGG 0.540173 1_1:-21190557 None:intergenic
CATGGTTATAGGTTCTCTGA+AGG 0.540492 1_1:+21191858 Msa0013740:CDS
AGTGTCTTTCCTCTTCAGAA+TGG 0.540546 1_1:-21195996 None:intergenic
AAGGGTCCTACAAGTTTCTC+CGG 0.542611 1_1:-21195635 None:intergenic
CATCCATGGGCGTAAGATTG+TGG 0.545061 1_1:-21189113 None:intergenic
GTTGAAGTTGTTAATGAGAG+TGG 0.546800 1_1:+21189056 Msa0013740:CDS
GTGATCGTGATATTCTAAAG+AGG 0.547186 1_1:+21195796 Msa0013740:CDS
TCCTTTGCAGGTGGGGACAG+AGG 0.549969 1_1:+21188999 Msa0013740:intron
TAGAGCGTGCACTTTGGGAA+GGG 0.552773 1_1:-21195844 None:intergenic
TCAGAGAAATTAAAATCGCA+AGG 0.552843 1_1:+21189531 Msa0013740:CDS
CATGACAAGGTTATAAAGAA+GGG 0.554767 1_1:+21196438 Msa0013740:intron
TGTTATTATTACTCCATCAA+GGG 0.554861 1_1:+21189497 Msa0013740:CDS
TGGATTATCACCACAAGAAG+AGG 0.557132 1_1:-21189680 None:intergenic
CAGAGGAGGCATGATTAAGA+AGG 0.558194 1_1:+21189016 Msa0013740:CDS
CTAATTCTATGACTACTGGT+TGG 0.561386 1_1:+21195326 Msa0013740:CDS
GAGAATTCCCAAGAAATATG+TGG 0.561715 1_1:+21194434 Msa0013740:intron
GATCTCTTGTGACTACTGGT+TGG 0.563285 1_1:+21190814 Msa0013740:CDS
TTAAAGAAATTAATATCGCA+AGG 0.569842 1_1:+21190954 Msa0013740:CDS
CAGTGGAGGCATGATTAAGA+AGG 0.573799 1_1:+21190446 Msa0013740:CDS
ATAGTAACGGTGAATGAAAG+TGG 0.574816 1_1:-21190906 None:intergenic
TTGTCAAAATCTTACGTCCA+TGG 0.576626 1_1:+21190540 Msa0013740:CDS
TACTTTGCAGGTAGGGACAG+TGG 0.579327 1_1:+21190429 Msa0013740:intron
CGTCCATGGCAGCAATATGT+TGG 0.579724 1_1:+21190554 Msa0013740:CDS
GTGATCGTGATATTCTAAAG+AGG 0.582771 1_1:+21195605 Msa0013740:CDS
AATTACCAGGTTATAAAGAA+GGG 0.583013 1_1:+21189656 Msa0013740:intron
AGAGGACACATCTATGAAAG+TGG 0.584211 1_1:+21195276 Msa0013740:CDS
TGCAAGCTTAAGAGTTGGAG+AGG 0.584782 1_1:+21195258 Msa0013740:CDS
TTGCCACAATCTTACGCCCA+TGG 0.586417 1_1:+21189110 Msa0013740:CDS
TGCAAACTTAAGAGTTGGTG+AGG 0.587078 1_1:+21189323 Msa0013740:CDS
TGCAAACTTAAGAGTTGGTG+AGG 0.587078 1_1:+21190746 Msa0013740:CDS
CCAAAAGAGCATGCTTCCCA+TGG 0.588789 1_1:+21196524 Msa0013740:CDS
ACTTACCATCCTGCATCCAT+GGG 0.589632 1_1:-21189126 None:intergenic
GAAATACTTGTCTCCTAGAG+CGG 0.589908 1_1:+21203960 Msa0013740:CDS
CCAAACCCTAAGAAGTTGCA+AGG 0.590895 1_1:+21195460 Msa0013740:CDS
ATGACACAAACTTACGCCCA+TGG 0.594951 1_1:+21195096 Msa0013740:CDS
ATTCTAAAGAGGAAAGACAC+TGG 0.596323 1_1:+21195807 Msa0013740:CDS
ATATTTGCAGAATGTTCCAA+AGG 0.598638 1_1:+21191743 Msa0013740:intron
ATTCTATGGAGGAAAGACAA+TGG 0.599481 1_1:+21196482 Msa0013740:CDS
AAAGAAGGAGTTGAAGTGAG+TGG 0.599535 1_1:+21187995 Msa0013740:CDS
CTCTCTGGAGTTGAAAATGG+GGG 0.599653 1_1:+21191794 Msa0013740:CDS
CGTTACTATTACTCCATCAA+GGG 0.606445 1_1:+21190920 Msa0013740:CDS
GTGATCATGCCATTCTGAAG+AGG 0.606499 1_1:+21195987 Msa0013740:CDS
ATTCATAAAAGAATGCAAAG+TGG 0.613826 1_1:+21191890 Msa0013740:CDS
GTTAAATGACTTCCAACCAG+TGG 0.617600 1_1:-21189403 None:intergenic
AAATACCCACCCAAGCTCAA+AGG 0.617745 1_1:+21188047 Msa0013740:CDS
ACTATTACTAAAGCCATCAA+GGG 0.618938 1_1:+21195436 Msa0013740:CDS
TTTGCAGGTGGGGACAGAGG+AGG 0.624914 1_1:+21189002 Msa0013740:intron
GTGATAAGAATATTCTATGG+AGG 0.625937 1_1:+21196471 Msa0013740:CDS
AAAGAAGGGACCTCTTCTTG+TGG 0.632268 1_1:+21189670 Msa0013740:CDS
ATTTATGGAAGAATGCAAAG+TGG 0.635124 1_1:+21203931 Msa0013740:CDS
TATGTGGAGAGATATTGGAA+AGG 0.635349 1_1:+21194450 Msa0013740:CDS
TAATGAGAGTGAAATACCAA+AGG 0.647791 1_1:+21194749 Msa0013740:CDS
TGATGTGTATTCAAAATACC+CGG 0.654603 1_1:+21191635 Msa0013740:CDS
CCTTGATGGAGTAATAGTAA+CGG 0.655922 1_1:-21190919 None:intergenic
ATTCTAAAGAGGAAAGACAC+CGG 0.656907 1_1:+21195616 Msa0013740:CDS
ACTCTCTGGAGTTGAAAATG+GGG 0.658989 1_1:+21191793 Msa0013740:CDS
TTACGCCCATGGATGCAGGA+TGG 0.665735 1_1:+21189121 Msa0013740:CDS
ATATTATCCTATGAAAATCG+GGG 0.671225 1_1:-21187548 None:intergenic
TCTCTGGAGTTGAAAATGGG+GGG 0.680996 1_1:+21191795 Msa0013740:CDS
ATTCTGAAGAGGAAAGACAC+TGG 0.681183 1_1:+21195998 Msa0013740:CDS
TTTGCAGGTAGGGACAGTGG+AGG 0.713017 1_1:+21190432 Msa0013740:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAAAAATATATTTTTTTTAA+AGG - chr1_1:21188881-21188900 None:intergenic 0.0%
!!! ATTTATAATATATTTTTATA+GGG - chr1_1:21197916-21197935 None:intergenic 0.0%
!!! TATTTATAATATATTTTTAT+AGG - chr1_1:21197917-21197936 None:intergenic 0.0%
!! TAAAAATATATTATAAATAT+AGG + chr1_1:21197918-21197937 Msa0013740:intron 0.0%
!! TTTGAATATGAATTAAAAAA+AGG + chr1_1:21188438-21188457 Msa0013740:intron 10.0%
!!! TTTGTTATTATTTTCTATAA+GGG - chr1_1:21188512-21188531 None:intergenic 10.0%
!!! ATTTGTTATTATTTTCTATA+AGG - chr1_1:21188513-21188532 None:intergenic 10.0%
!! TCTTAATAAATAAAATGATA+TGG + chr1_1:21188701-21188720 Msa0013740:intron 10.0%
!!! TTTTATTTATTAAAGATTAG+TGG - chr1_1:21189228-21189247 None:intergenic 10.0%
!! AATCTTTAATAAATAAAATG+TGG + chr1_1:21189230-21189249 Msa0013740:intron 10.0%
!!! AAACTTTTATTTTTTTAAGT+TGG + chr1_1:21189780-21189799 Msa0013740:intron 10.0%
!! ACTAATATTTAATCAATTAT+TGG - chr1_1:21189818-21189837 None:intergenic 10.0%
!!! TTTTAAAAAAATAAACCAAA+AGG + chr1_1:21189974-21189993 Msa0013740:intron 10.0%
!! TTTAAAAAAATAAACCAAAA+GGG + chr1_1:21189975-21189994 Msa0013740:intron 10.0%
!!! ATCATTTTATATTTATTTTG+GGG - chr1_1:21190023-21190042 None:intergenic 10.0%
!!! CTATCATTTTATATTTATTT+TGG - chr1_1:21190025-21190044 None:intergenic 10.0%
!! ATATTTAAAAAATGACTAAT+AGG - chr1_1:21190085-21190104 None:intergenic 10.0%
!!! AAAAAAAATTTACCTTTTAA+AGG + chr1_1:21190241-21190260 Msa0013740:intron 10.0%
!! ATATATCATGATAAAAAATA+GGG - chr1_1:21190294-21190313 None:intergenic 10.0%
!! TATATATCATGATAAAAAAT+AGG - chr1_1:21190295-21190314 None:intergenic 10.0%
!!! ATTTATTTTTATAAATGAAG+AGG - chr1_1:21193313-21193332 None:intergenic 10.0%
!! TCTTCATTTATAAAAATAAA+TGG + chr1_1:21193312-21193331 Msa0013740:intron 10.0%
!! AAGTAAAATTATATATGTTT+AGG - chr1_1:21193783-21193802 None:intergenic 10.0%
!!! TTAATTTTTAAATATATTGG+CGG + chr1_1:21194606-21194625 Msa0013740:intron 10.0%
!! TTAACTAAATAAAGAAATTA+AGG - chr1_1:21195716-21195735 None:intergenic 10.0%
!!! GATTAATAACATTTTTAATT+CGG - chr1_1:21196631-21196650 None:intergenic 10.0%
!! AATTAAAAATGTTATTAATC+TGG + chr1_1:21196631-21196650 Msa0013740:intron 10.0%
!!! CTATTTAAAATTAATGTTTA+CGG - chr1_1:21196712-21196731 None:intergenic 10.0%
!!! AAAATTATCTAATAGTTTTT+TGG - chr1_1:21196863-21196882 None:intergenic 10.0%
!!! AAAATTATCTAATAGTTTTT+TGG - chr1_1:21196863-21196882 None:intergenic 10.0%
!!! AGAAAAATTCATTTTTATAT+TGG + chr1_1:21197671-21197690 Msa0013740:intron 10.0%
!!! GAAAAATTCATTTTTATATT+GGG + chr1_1:21197672-21197691 Msa0013740:intron 10.0%
!!! GAATTATTAAATATTTTGTA+AGG - chr1_1:21197771-21197790 None:intergenic 10.0%
!! ACAAAATATTTAATAATTCA+AGG + chr1_1:21197772-21197791 Msa0013740:intron 10.0%
!!! AAATTTAGAGATTTTTAAAT+AGG - chr1_1:21197885-21197904 None:intergenic 10.0%
!!! TAAAAATCTCTAAATTTTTT+TGG + chr1_1:21197888-21197907 Msa0013740:intron 10.0%
!!! AAAAATCTCTAAATTTTTTT+GGG + chr1_1:21197889-21197908 Msa0013740:intron 10.0%
!!! TAAAATCTCTAATTTTTTTT+TGG + chr1_1:21197947-21197966 Msa0013740:intron 10.0%
!!! AAAATCTCTAATTTTTTTTT+GGG + chr1_1:21197948-21197967 Msa0013740:intron 10.0%
!!! AAAGATTTAGATATTTTTAA+AGG - chr1_1:21197976-21197995 None:intergenic 10.0%
!! TATAAAAATATATAACCATT+TGG + chr1_1:21198019-21198038 Msa0013740:intron 10.0%
!!! ATATTTGGTTTCAAAAAAAT+TGG + chr1_1:21187813-21187832 Msa0013740:CDS 15.0%
!!! TATTTGGTTTCAAAAAAATT+GGG + chr1_1:21187814-21187833 Msa0013740:CDS 15.0%
!!! ATAGTTTATTTCTAAAGTAT+TGG - chr1_1:21187927-21187946 None:intergenic 15.0%
!! ATATTCAAAAAATGACTAAT+AGG - chr1_1:21188427-21188446 None:intergenic 15.0%
!!! TTATTGTTTTTTTCTTCAAT+GGG + chr1_1:21188806-21188825 Msa0013740:intron 15.0%
!!! AGCATTTTTAATAACAAAAA+AGG - chr1_1:21189562-21189581 None:intergenic 15.0%
!! ATCAATTATTGGTAAATTAA+GGG - chr1_1:21189807-21189826 None:intergenic 15.0%
!! AATCAATTATTGGTAAATTA+AGG - chr1_1:21189808-21189827 None:intergenic 15.0%
!!! TTTTTAAAAAAAAAGGTTCA+AGG - chr1_1:21189963-21189982 None:intergenic 15.0%
!! TATAAAATGATAGAAACTAA+AGG + chr1_1:21190032-21190051 Msa0013740:intron 15.0%
!! AATTTATGTAATTAATGCAT+TGG - chr1_1:21190218-21190237 None:intergenic 15.0%
!! CATGATATATAAATAAATGT+AGG + chr1_1:21190304-21190323 Msa0013740:intron 15.0%
!! ATCAATTATTGATAAATTCA+GGG - chr1_1:21191230-21191249 None:intergenic 15.0%
!! AATCAATTATTGATAAATTC+AGG - chr1_1:21191231-21191250 None:intergenic 15.0%
!! ACATTATTTCAAAATCATTA+GGG - chr1_1:21191325-21191344 None:intergenic 15.0%
!! TACATTATTTCAAAATCATT+AGG - chr1_1:21191326-21191345 None:intergenic 15.0%
!!! ACTTATCAATAATTTGAAAT+AGG - chr1_1:21191434-21191453 None:intergenic 15.0%
!! ACGATTAATTACATAAAATA+TGG + chr1_1:21191659-21191678 Msa0013740:intron 15.0%
!!! AATTGTTTGTAATGTTTTTT+GGG + chr1_1:21192177-21192196 Msa0013740:intron 15.0%
!! AAATTTAGTGTAATACATTT+AGG + chr1_1:21193042-21193061 Msa0013740:intron 15.0%
!! AAGAAAATATATATGAAGAT+TGG - chr1_1:21193246-21193265 None:intergenic 15.0%
!!! TTGTTTTATAAACTTGTTTT+TGG - chr1_1:21193281-21193300 None:intergenic 15.0%
!!! AATATATTATTGACTATTGA+TGG - chr1_1:21194118-21194137 None:intergenic 15.0%
!!! ATATTTGGTTTCAAAAAAAT+TGG + chr1_1:21187813-21187832 Msa0013740:CDS 15.0%
!!! TATTTGGTTTCAAAAAAATT+GGG + chr1_1:21187814-21187833 Msa0013740:CDS 15.0%
!!! ATAAGTAAATTCATTTTCAA+AGG - chr1_1:21194888-21194907 None:intergenic 15.0%
!! AATTAATCTCTAATAAAATG+TGG + chr1_1:21195168-21195187 Msa0013740:intron 15.0%
!! TTAACTAAGTAAAGAAATTA+AGG - chr1_1:21195907-21195926 None:intergenic 15.0%
!! TTAACTAAATAAAGAACTTA+AGG - chr1_1:21196098-21196117 None:intergenic 15.0%
!! TAAATTATTGATAAGTTTAG+AGG - chr1_1:21196657-21196676 None:intergenic 15.0%
!! TACAATTTCATTCAAATTTA+TGG - chr1_1:21196735-21196754 None:intergenic 15.0%
!!! AAACATTTTCAAAGAAATTA+AGG - chr1_1:21197146-21197165 None:intergenic 15.0%
!! CAAAATATTTAATAGTTCAA+GGG + chr1_1:21197196-21197215 Msa0013740:intron 15.0%
!!! ACTTTTAAATAATTTGTGAA+TGG + chr1_1:21197744-21197763 Msa0013740:intron 15.0%
!!! CATATCAATAGTTTTTATAT+AGG - chr1_1:21197825-21197844 None:intergenic 15.0%
!! AAAAACTATTGATATGTTTA+AGG + chr1_1:21197829-21197848 Msa0013740:intron 15.0%
!! AAAACTATTGATATGTTTAA+GGG + chr1_1:21197830-21197849 Msa0013740:intron 15.0%
!!! TTAAAAAAACAGTTTTTTCA+TGG + chr1_1:21198454-21198473 Msa0013740:intron 15.0%
!!! TAAAAAAACAGTTTTTTCAT+GGG + chr1_1:21198455-21198474 Msa0013740:intron 15.0%
!!! CTTTTGAAAAATTTAAAGAA+TGG + chr1_1:21200594-21200613 Msa0013740:intron 15.0%
!! AATCAAAATTTATTATAAGC+AGG + chr1_1:21201095-21201114 Msa0013740:intron 15.0%
!! ATCAAAATTTATTATAAGCA+GGG + chr1_1:21201096-21201115 Msa0013740:intron 15.0%
!!! TTAAAAAAACAGTTTTTTCA+TGG + chr1_1:21198454-21198473 Msa0013740:intron 15.0%
!!! TAAAAAAACAGTTTTTTCAT+GGG + chr1_1:21198455-21198474 Msa0013740:intron 15.0%
!! AATATTATCCTATGAAAATC+GGG - chr1_1:21187552-21187571 None:intergenic 20.0%
!! CAATATTATCCTATGAAAAT+CGG - chr1_1:21187553-21187572 None:intergenic 20.0%
!!! TTTGCAAAGTTTCTAAAATA+TGG + chr1_1:21187842-21187861 Msa0013740:intron 20.0%
!!! CTCTTAACTTTTAAATACAT+AGG + chr1_1:21187869-21187888 Msa0013740:intron 20.0%
!!! TTAACTTTTAAATACATAGG+TGG + chr1_1:21187872-21187891 Msa0013740:intron 20.0%
!! AAACATAAATTTGAAAAGCA+AGG - chr1_1:21188150-21188169 None:intergenic 20.0%
!!! TGTAACTTTCTATTTTCTTA+AGG + chr1_1:21188630-21188649 Msa0013740:intron 20.0%
!!! GTAACTTTCTATTTTCTTAA+GGG + chr1_1:21188631-21188650 Msa0013740:intron 20.0%
!!! GTTATTGTTTTTTTCTTCAA+TGG + chr1_1:21188805-21188824 Msa0013740:intron 20.0%
!!! TATTGTTTTTTTCTTCAATG+GGG + chr1_1:21188807-21188826 Msa0013740:intron 20.0%
!!! AATAAATCTAAACTTGTTTC+TGG + chr1_1:21188909-21188928 Msa0013740:intron 20.0%
!!! CTAATAAAGTATCCTAATTT+TGG + chr1_1:21189161-21189180 Msa0013740:intron 20.0%
!! TATTAACTAATGCCAAAATT+AGG - chr1_1:21189176-21189195 None:intergenic 20.0%
!!! ATTTTTGGAAACAATATTAG+TGG - chr1_1:21189199-21189218 None:intergenic 20.0%
!!! GATTAGTGGTATTTTATTTT+TGG - chr1_1:21189214-21189233 None:intergenic 20.0%
!!! CAACTTGTAAGTTATATTTT+TGG - chr1_1:21189428-21189447 None:intergenic 20.0%
!! CAAAAATATAACTTACAAGT+TGG + chr1_1:21189426-21189445 Msa0013740:CDS 20.0%
!! ATAATAACAAGAAATGAAAG+TGG - chr1_1:21189486-21189505 None:intergenic 20.0%
!!! TTTTATATTTATTTTGGGGT+TGG - chr1_1:21190019-21190038 None:intergenic 20.0%
!!! TGAAATATTTGACTTGTTTA+TGG - chr1_1:21190191-21190210 None:intergenic 20.0%
!! GACAATGTAACATAAAAAAA+GGG - chr1_1:21190525-21190544 None:intergenic 20.0%
!! TGACAATGTAACATAAAAAA+AGG - chr1_1:21190526-21190545 None:intergenic 20.0%
!!! AATTAGTAGACATTTTTAGA+TGG - chr1_1:21190588-21190607 None:intergenic 20.0%
!!! CTAAAAATGTCTACTAATTT+TGG + chr1_1:21190589-21190608 Msa0013740:intron 20.0%
!! ACAAATTATTAGAGATTAGT+GGG - chr1_1:21190654-21190673 None:intergenic 20.0%
!! AACAAATTATTAGAGATTAG+TGG - chr1_1:21190655-21190674 None:intergenic 20.0%
!!! CAATCTGTAAGTTATATTTT+TGG - chr1_1:21190851-21190870 None:intergenic 20.0%
!! CAAAAATATAACTTACAGAT+TGG + chr1_1:21190849-21190868 Msa0013740:CDS 20.0%
!! GATATTAATTTCTTTAAGCT+TGG - chr1_1:21190951-21190970 None:intergenic 20.0%
!! TTAAAGAAATTAATATCGCA+AGG + chr1_1:21190954-21190973 Msa0013740:CDS 20.0%
!!! GTTTTTTGTTCTTTCTTATT+TGG + chr1_1:21190976-21190995 Msa0013740:intron 20.0%
!! TCAAATTATTGATAAGTTCA+AGG + chr1_1:21191437-21191456 Msa0013740:intron 20.0%
!!! TTTTATGTAATTAATCGTAC+CGG - chr1_1:21191657-21191676 None:intergenic 20.0%
!! AATTATTACGATAGTATTCA+TGG + chr1_1:21191840-21191859 Msa0013740:CDS 20.0%
!! ATTCTATAGTAAAAACTCAA+AGG - chr1_1:21192160-21192179 None:intergenic 20.0%
!!! GAATTGTTTGTAATGTTTTT+TGG + chr1_1:21192176-21192195 Msa0013740:intron 20.0%
!!! GTTAATTTGATTGTTAAAAG+TGG + chr1_1:21192747-21192766 Msa0013740:intron 20.0%
!!! TTCTGAAGAAAAATGATAAA+TGG + chr1_1:21193104-21193123 Msa0013740:intron 20.0%
!! AAATTTATGCTACTATGTAA+TGG - chr1_1:21193192-21193211 None:intergenic 20.0%
!!! AAACTTGTTTTTGGAAAAAT+CGG - chr1_1:21193272-21193291 None:intergenic 20.0%
!!! AGAGTTTCTTATTTTATTTG+TGG - chr1_1:21193929-21193948 None:intergenic 20.0%
!! ACTAAAATGGAGATATAATT+GGG - chr1_1:21193981-21194000 None:intergenic 20.0%
!! TTATTTATTTCCCAATAGTA+AGG + chr1_1:21194071-21194090 Msa0013740:intron 20.0%
!! AATATTATCCTATGAAAATC+GGG - chr1_1:21187552-21187571 None:intergenic 20.0%
!! CAATATTATCCTATGAAAAT+CGG - chr1_1:21187553-21187572 None:intergenic 20.0%
!!! TGTTCAACAACAAATATTTT+GGG + chr1_1:21194509-21194528 Msa0013740:CDS 20.0%
!! TATTTCAAGGTTAAGATATT+TGG + chr1_1:21194633-21194652 Msa0013740:intron 20.0%
!!! TTCATCAACAGATTTTATAT+TGG - chr1_1:21194685-21194704 None:intergenic 20.0%
!! AAGGAAACATGATATTAAAA+AGG - chr1_1:21194869-21194888 None:intergenic 20.0%
!! GTCATTAAAACTTCAAAAAA+GGG - chr1_1:21195081-21195100 None:intergenic 20.0%
!! TGTCATTAAAACTTCAAAAA+AGG - chr1_1:21195082-21195101 None:intergenic 20.0%
!!! CTAAATTATGTTTACTGATT+TGG + chr1_1:21195141-21195160 Msa0013740:intron 20.0%
!!! CAACTTGTAAGTTATATTTT+TGG - chr1_1:21189428-21189447 None:intergenic 20.0%
!! CAAAAATATAACTTACAAGT+TGG + chr1_1:21189426-21189445 Msa0013740:CDS 20.0%
!! ATAGTAATAGTGAATAAAAG+TGG - chr1_1:21195421-21195440 None:intergenic 20.0%
!! TCATGGATAAAAGAAATTAA+GGG - chr1_1:21195939-21195958 None:intergenic 20.0%
!!! GTGTTAATAATATTCTAAAG+AGG + chr1_1:21196178-21196197 Msa0013740:intron 20.0%
!!! ATTATCTAATAGTTTTTTGG+TGG - chr1_1:21196860-21196879 None:intergenic 20.0%
!!! TATCTAATAGTTTTTTGGTA+AGG - chr1_1:21196929-21196948 None:intergenic 20.0%
!!! GAATTCCTAAATATTTTGTA+AGG - chr1_1:21197001-21197020 None:intergenic 20.0%
!!! CACATCAATAATTTGTATAT+AGG - chr1_1:21197048-21197067 None:intergenic 20.0%
!! ACAAATTATTGATGTGTTTA+AGG + chr1_1:21197052-21197071 Msa0013740:intron 20.0%
!! GCAAAATATTTAATAGTTCA+AGG + chr1_1:21197195-21197214 Msa0013740:intron 20.0%
!!! CATCTTTTTGAATTGTTATT+TGG + chr1_1:21197257-21197276 Msa0013740:intron 20.0%
!! AATCTAAAGAAGAAATACAT+TGG + chr1_1:21197355-21197374 Msa0013740:intron 20.0%
!!! TTTAGATTTTACTATTGTGA+AGG + chr1_1:21196570-21196589 Msa0013740:intron 20.0%
!! TCCTATTTATAAGAGAAATT+TGG + chr1_1:21197548-21197567 Msa0013740:intron 20.0%
!! CCTATTTATAAGAGAAATTT+GGG + chr1_1:21197549-21197568 Msa0013740:intron 20.0%
!!! CCTATTTATAAGAGAAATTT+TGG - chr1_1:21197549-21197568 None:intergenic 20.0%
!! CCAAAATTTCTCTTATAAAT+AGG + chr1_1:21197631-21197650 Msa0013740:intron 20.0%
!!! TCAGTAAATTAATTTTTCGT+TGG + chr1_1:21197797-21197816 Msa0013740:intron 20.0%
!! AAAATATATAACCATTTGGT+TGG + chr1_1:21198023-21198042 Msa0013740:intron 20.0%
!!! ATTTTGTATGTAGAATCAAA+GGG + chr1_1:21198145-21198164 Msa0013740:intron 20.0%
!! AAATGTTAGAACAAAATTGT+TGG + chr1_1:21198271-21198290 Msa0013740:intron 20.0%
!! TACAAGGTTTATATTTATAG+TGG - chr1_1:21198518-21198537 None:intergenic 20.0%
!!! CAATAAGATTATTGATGATT+TGG + chr1_1:21199410-21199429 Msa0013740:intron 20.0%
!! ATTAAATTTCTCTTAAGTTC+AGG - chr1_1:21200086-21200105 None:intergenic 20.0%
!!! CATGGTTTATATATTTTAGA+TGG + chr1_1:21200209-21200228 Msa0013740:intron 20.0%
!!! TTATTGATGATTATTCTAGA+AGG + chr1_1:21200537-21200556 Msa0013740:intron 20.0%
!!! TATTGATGATTATTCTAGAA+GGG + chr1_1:21200538-21200557 Msa0013740:intron 20.0%
!!! TACTCTAATTTGAAAGTTTT+TGG + chr1_1:21200953-21200972 Msa0013740:intron 20.0%
!!! ATAATAAATTTTGATTCTCC+AGG - chr1_1:21201091-21201110 None:intergenic 20.0%
!! TAAGAATATCATCTACATAA+AGG - chr1_1:21201997-21202016 None:intergenic 20.0%
!! TTATGTAGATGATATTCTTA+TGG + chr1_1:21201997-21202016 Msa0013740:intron 20.0%
!! TACAAGGTTTATATTTATAG+TGG - chr1_1:21198518-21198537 None:intergenic 20.0%
! ATATTATCCTATGAAAATCG+GGG - chr1_1:21187551-21187570 None:intergenic 25.0%
!! TGTTCAACAAGCAATATTTT+GGG + chr1_1:21187775-21187794 Msa0013740:CDS 25.0%
! TGTTTCAAGGTTAAGATATT+TGG + chr1_1:21187899-21187918 Msa0013740:CDS 25.0%
! TTCTTCAACAGATTTGATAT+TGG - chr1_1:21187951-21187970 None:intergenic 25.0%
!! AATATCTAAAACCTGCATAA+TGG + chr1_1:21188349-21188368 Msa0013740:intron 25.0%
! TTAATCAAAAACCATTATGC+AGG - chr1_1:21188363-21188382 None:intergenic 25.0%
! TTAAAATAAGCTGCATAAAG+TGG + chr1_1:21188379-21188398 Msa0013740:intron 25.0%
! TAAAATAAGCTGCATAAAGT+GGG + chr1_1:21188380-21188399 Msa0013740:intron 25.0%
! TCATAAGATTGTGATACATT+GGG - chr1_1:21188482-21188501 None:intergenic 25.0%
! ATCATAAGATTGTGATACAT+TGG - chr1_1:21188483-21188502 None:intergenic 25.0%
!!! CTTATCCATTTTTGCATTTT+TGG + chr1_1:21188545-21188564 Msa0013740:intron 25.0%
! AATCGTAAAATTGTGATACT+TGG + chr1_1:21188658-21188677 Msa0013740:intron 25.0%
! ATCGTAAAATTGTGATACTT+GGG + chr1_1:21188659-21188678 Msa0013740:intron 25.0%
! CACACTTGAACAAATTTAAA+GGG + chr1_1:21189298-21189317 Msa0013740:CDS 25.0%
!! TTGTTATTATTACTCCATCA+AGG + chr1_1:21189496-21189515 Msa0013740:CDS 25.0%
! TGTTATTATTACTCCATCAA+GGG + chr1_1:21189497-21189516 Msa0013740:CDS 25.0%
! TTCTTTATAACCTGGTAATT+GGG - chr1_1:21189656-21189675 None:intergenic 25.0%
! AATTACCAGGTTATAAAGAA+GGG + chr1_1:21189656-21189675 Msa0013740:intron 25.0%
!!! TTTCAAGAAGATGATTTGTT+GGG - chr1_1:21189741-21189760 None:intergenic 25.0%
! AAAAAAATAAACCAAAAGGG+TGG + chr1_1:21189978-21189997 Msa0013740:intron 25.0%
! AAAATGATAGAAACTAAAGG+AGG + chr1_1:21190035-21190054 Msa0013740:intron 25.0%
! AAATGATAGAAACTAAAGGA+GGG + chr1_1:21190036-21190055 Msa0013740:intron 25.0%
!!! GATTAGTGGGATTTTATTTT+TGG - chr1_1:21190641-21190660 None:intergenic 25.0%
! CACACTTGAACAAATTTAAT+GGG + chr1_1:21190721-21190740 Msa0013740:CDS 25.0%
! TCAAAGAGAGAAGAATTTAA+AGG + chr1_1:21191127-21191146 Msa0013740:intron 25.0%
! AAGAATTTAAAGGAACTTCT+AGG + chr1_1:21191137-21191156 Msa0013740:intron 25.0%
!!! TACTTTCAAGATGATTTGTT+GGG - chr1_1:21191168-21191187 None:intergenic 25.0%
!! ATACTTTCAAGATGATTTGT+TGG - chr1_1:21191169-21191188 None:intergenic 25.0%
!! ACATCAATCTTGAATGTTTT+AGG - chr1_1:21191621-21191640 None:intergenic 25.0%
! TTTATGTAATTAATCGTACC+GGG - chr1_1:21191656-21191675 None:intergenic 25.0%
! ATTCATAAAAGAATGCAAAG+TGG + chr1_1:21191890-21191909 Msa0013740:CDS 25.0%
! GTATTTGATGTTTCAATTGT+AGG + chr1_1:21191960-21191979 Msa0013740:intron 25.0%
!!! GTTTTTTGTGTTGAATTTTG+AGG + chr1_1:21192470-21192489 Msa0013740:intron 25.0%
! AAGTGGTGAATTTAAATAGA+TGG + chr1_1:21192764-21192783 Msa0013740:intron 25.0%
! TCAAAGGTTAGAGAATAATA+TGG - chr1_1:21192865-21192884 None:intergenic 25.0%
! TCAATAAATGCATCTTACAA+AGG + chr1_1:21192963-21192982 Msa0013740:intron 25.0%
!! ATTGATTCATGAAATTTCGT+AGG - chr1_1:21193143-21193162 None:intergenic 25.0%
! TACGAAATTTCATGAATCAA+TGG + chr1_1:21193142-21193161 Msa0013740:intron 25.0%
! GATGCTAAGAAATTATATGA+TGG - chr1_1:21193217-21193236 None:intergenic 25.0%
! GATAGACACAAAAAAATAGA+TGG + chr1_1:21193354-21193373 Msa0013740:intron 25.0%
! AATGAAGAGTTTAAATAGAG+AGG + chr1_1:21193484-21193503 Msa0013740:intron 25.0%
! TTAACTCTTTCAAAGAGAAA+GGG - chr1_1:21193655-21193674 None:intergenic 25.0%
! CACTAAAATGGAGATATAAT+TGG - chr1_1:21193982-21194001 None:intergenic 25.0%
!! TACATATGTATTGGTATACT+GGG - chr1_1:21194038-21194057 None:intergenic 25.0%
!! TTACATATGTATTGGTATAC+TGG - chr1_1:21194039-21194058 None:intergenic 25.0%
! ACCAATACATATGTAATTGT+TGG + chr1_1:21194043-21194062 Msa0013740:intron 25.0%
! TCCAACAATTACATATGTAT+TGG - chr1_1:21194047-21194066 None:intergenic 25.0%
!!! TATATTAAAACATTTTGGCG+TGG + chr1_1:21194132-21194151 Msa0013740:intron 25.0%
! AGTTTCAATTCACATTTCAA+AGG + chr1_1:21194209-21194228 Msa0013740:intron 25.0%
! ATATTATCCTATGAAAATCG+GGG - chr1_1:21187551-21187570 None:intergenic 25.0%
! AATTCTCTGCAACAAAAAAT+TGG - chr1_1:21194421-21194440 None:intergenic 25.0%
! TTGGGAATTTAAGGAATATT+GGG - chr1_1:21194485-21194504 None:intergenic 25.0%
! TTTGGGAATTTAAGGAATAT+TGG - chr1_1:21194486-21194505 None:intergenic 25.0%
! ATATTCCTTAAATTCCCAAA+TGG + chr1_1:21194486-21194505 Msa0013740:CDS 25.0%
!! GTGTTCAACAACAAATATTT+TGG + chr1_1:21194508-21194527 Msa0013740:CDS 25.0%
! AAGCTCAAATGATAACAAAT+GGG + chr1_1:21194772-21194791 Msa0013740:CDS 25.0%
! TTAACAAATTAACTCTAAGC+AGG + chr1_1:21194973-21194992 Msa0013740:intron 25.0%
! TCATACTTGAACAAATTTGA+AGG + chr1_1:21195232-21195251 Msa0013740:intron 25.0%
! CATACTTGAACAAATTTGAA+GGG + chr1_1:21195233-21195252 Msa0013740:intron 25.0%
! TCTTCTTTATAACATTGTCA+TGG - chr1_1:21195765-21195784 None:intergenic 25.0%
! GTCATGGATAAAAGAAATTA+AGG - chr1_1:21195940-21195959 None:intergenic 25.0%
!! AATTTCTTTTATCCATGACA+AGG + chr1_1:21195941-21195960 Msa0013740:intron 25.0%
! CTTGTGATAAGAATATTCTA+TGG + chr1_1:21196468-21196487 Msa0013740:CDS 25.0%
! AAGTTAGAAGATTATACCAT+GGG - chr1_1:21196543-21196562 None:intergenic 25.0%
! AAAGTTAGAAGATTATACCA+TGG - chr1_1:21196544-21196563 None:intergenic 25.0%
! ACATTAAAACATGCAAATGT+CGG + chr1_1:21196818-21196837 Msa0013740:intron 25.0%
! TTGAGCCTTACAAAATATTT+AGG + chr1_1:21196993-21197012 Msa0013740:intron 25.0%
! CCATAAATAATTACAGAACA+TGG - chr1_1:21197023-21197042 None:intergenic 25.0%
! CCATGTTCTGTAATTATTTA+TGG + chr1_1:21197020-21197039 Msa0013740:intron 25.0%
! ATTTAATAGTTCAAGGGTTT+AGG + chr1_1:21197202-21197221 Msa0013740:intron 25.0%
! ATTTCTCTTATAAATAGGAC+CGG - chr1_1:21197636-21197655 None:intergenic 25.0%
! CCCAAATTTCTCTTATAAAT+AGG - chr1_1:21197552-21197571 None:intergenic 25.0%
! TCAACTAAAGTTAATGTATC+TGG - chr1_1:21197611-21197630 None:intergenic 25.0%
! ATTTCTCTTATAAATAGGAC+CGG + chr1_1:21197636-21197655 Msa0013740:intron 25.0%
!! TTTTTCTAATATACTCCTTC+CGG - chr1_1:21197658-21197677 None:intergenic 25.0%
!! TTTTTATATTGGGAAAGAGA+AGG + chr1_1:21197682-21197701 Msa0013740:intron 25.0%
!! TTTTATATTGGGAAAGAGAA+GGG + chr1_1:21197683-21197702 Msa0013740:intron 25.0%
!! CATTTTGTATGTAGAATCAA+AGG + chr1_1:21198144-21198163 Msa0013740:intron 25.0%
!! TTTTATGTAATTAACCCTAC+CGG - chr1_1:21198223-21198242 None:intergenic 25.0%
!! TCTTTACAAAGAGATTTTGA+AGG - chr1_1:21198745-21198764 None:intergenic 25.0%
! AGAAACTCATATCATTATAG+TGG + chr1_1:21198762-21198781 Msa0013740:intron 25.0%
! AAATAAACAGCAAGAGATAA+AGG - chr1_1:21198870-21198889 None:intergenic 25.0%
! TTGAAATTCTCAAAAGACTT+AGG - chr1_1:21199495-21199514 None:intergenic 25.0%
!!! TAAGTCTTTTGAGAATTTCA+AGG + chr1_1:21199494-21199513 Msa0013740:intron 25.0%
! ATATCTATAAGCATGTTTGA+TGG + chr1_1:21200104-21200123 Msa0013740:intron 25.0%
! ACACTTATAGAAAATCAGAT+TGG + chr1_1:21200620-21200639 Msa0013740:intron 25.0%
! ATTAGAAAGCAATGAAAGAA+AGG + chr1_1:21201429-21201448 Msa0013740:intron 25.0%
! TTTCATTACCTAAGAATCAA+AGG + chr1_1:21201515-21201534 Msa0013740:intron 25.0%
! TTCATTACCTAAGAATCAAA+GGG + chr1_1:21201516-21201535 Msa0013740:intron 25.0%
!! TTACAATGAAATCTTTTCAC+CGG + chr1_1:21201652-21201671 Msa0013740:intron 25.0%
! TGGTAAAACATTGTTCTATA+AGG + chr1_1:21201675-21201694 Msa0013740:intron 25.0%
! GGTAAAACATTGTTCTATAA+GGG + chr1_1:21201676-21201695 Msa0013740:intron 25.0%
! TGTTGAAGAAATCTTTGTAT+GGG + chr1_1:21201840-21201859 Msa0013740:intron 25.0%
!! GAATGATGAATTTGAAATGA+AGG + chr1_1:21202063-21202082 Msa0013740:intron 25.0%
!!! CATATTGTTTTTCTCTTCAT+CGG - chr1_1:21202275-21202294 None:intergenic 25.0%
!! TCTTTACAAAGAGATTTTGA+AGG - chr1_1:21198745-21198764 None:intergenic 25.0%
! AGAAACTCATATCATTATAG+TGG + chr1_1:21198762-21198781 Msa0013740:intron 25.0%
! AAATAAACAGCAAGAGATAA+AGG - chr1_1:21198870-21198889 None:intergenic 25.0%
! AAAAATTGTGGAGTTGAAAA+TGG + chr1_1:21203832-21203851 Msa0013740:intron 25.0%
! AAAATTGTGGAGTTGAAAAT+GGG + chr1_1:21203833-21203852 Msa0013740:intron 25.0%
! ATTTATTATCCTAGTATTCG+TGG + chr1_1:21203881-21203900 Msa0013740:intron 25.0%
! TAAAGGTTGGATGAAATTTA+TGG + chr1_1:21203916-21203935 Msa0013740:intron 25.0%
! AAAATATCCCCGATTTTCAT+AGG + chr1_1:21187541-21187560 Msa0013740:CDS 30.0%
GCAAACACACATAAATGAAA+CGG - chr1_1:21187641-21187660 None:intergenic 30.0%
TTGGGAATTGAAGGAATATT+GGG - chr1_1:21187751-21187770 None:intergenic 30.0%
TTTGGGAATTGAAGGAATAT+TGG - chr1_1:21187752-21187771 None:intergenic 30.0%
ATATTCCTTCAATTCCCAAA+TGG + chr1_1:21187752-21187771 Msa0013740:CDS 30.0%
! GTGTTCAACAAGCAATATTT+TGG + chr1_1:21187774-21187793 Msa0013740:CDS 30.0%
GAGAAAAAATAGTGTGGATT+TGG + chr1_1:21188087-21188106 Msa0013740:CDS 30.0%
TTATCCTAGCAAGAAAGAAA+AGG - chr1_1:21188189-21188208 None:intergenic 30.0%
ATGCAAAAATGGATAAGCTT+AGG - chr1_1:21188542-21188561 None:intergenic 30.0%
!! TGCATTGACTTGATCAAAAT+TGG - chr1_1:21188580-21188599 None:intergenic 30.0%
TCGTAAAATTGTGATACTTG+GGG + chr1_1:21188660-21188679 Msa0013740:intron 30.0%
TGCATTAACCCAATCAAAAT+TGG + chr1_1:21188734-21188753 Msa0013740:intron 30.0%
TGCAAGATTGTGATACTTAA+AGG + chr1_1:21188837-21188856 Msa0013740:intron 30.0%
GCAAGATTGTGATACTTAAA+GGG + chr1_1:21188838-21188857 Msa0013740:intron 30.0%
CAAGATTGTGATACTTAAAG+GGG + chr1_1:21188839-21188858 Msa0013740:intron 30.0%
!! TAGCAAATGAACTCTAAAAC+AGG + chr1_1:21188954-21188973 Msa0013740:intron 30.0%
GGCAATGTAACATCAAAAAA+GGG - chr1_1:21189095-21189114 None:intergenic 30.0%
TGGCAATGTAACATCAAAAA+AGG - chr1_1:21189096-21189115 None:intergenic 30.0%
!! AGGATACTTTATTAGCTTGT+AGG - chr1_1:21189156-21189175 None:intergenic 30.0%
TCACCTATTTCAATTCATCA+TGG - chr1_1:21189257-21189276 None:intergenic 30.0%
GCACACTTGAACAAATTTAA+AGG + chr1_1:21189297-21189316 Msa0013740:CDS 30.0%
TCAGAGAAATTAAAATCGCA+AGG + chr1_1:21189531-21189550 Msa0013740:CDS 30.0%
CTTCTTTATAACCTGGTAAT+TGG - chr1_1:21189657-21189676 None:intergenic 30.0%
CAATTACCAGGTTATAAAGA+AGG + chr1_1:21189655-21189674 Msa0013740:intron 30.0%
! CTTTCAAGAAGATGATTTGT+TGG - chr1_1:21189742-21189761 None:intergenic 30.0%
AATGATAGAAACTAAAGGAG+GGG + chr1_1:21190037-21190056 Msa0013740:intron 30.0%
!! CACTCTTTAAGACCTTTAAA+AGG - chr1_1:21190256-21190275 None:intergenic 30.0%
!! TTGCAAATGAACTCTAAAGT+AGG + chr1_1:21190384-21190403 Msa0013740:intron 30.0%
TGTACATGATGAATTGAAAC+AGG + chr1_1:21190674-21190693 Msa0013740:intron 30.0%
TGTGCTCTTGAAAAATTACT+TGG - chr1_1:21190705-21190724 None:intergenic 30.0%
GCACACTTGAACAAATTTAA+TGG + chr1_1:21189297-21189316 Msa0013740:CDS 30.0%
TTCCTTATAACCTGGTAATT+GGG - chr1_1:21191083-21191102 None:intergenic 30.0%
AATTACCAGGTTATAAGGAA+GGG + chr1_1:21191083-21191102 Msa0013740:intron 30.0%
! ATCATTTCAAAGTTCTAGCT+AGG + chr1_1:21191370-21191389 Msa0013740:intron 30.0%
! TCATTTCAAAGTTCTAGCTA+GGG + chr1_1:21191371-21191390 Msa0013740:intron 30.0%
TGATGTGTATTCAAAATACC+CGG + chr1_1:21191635-21191654 Msa0013740:CDS 30.0%
ATATTTGCAGAATGTTCCAA+AGG + chr1_1:21191743-21191762 Msa0013740:intron 30.0%
ACGATAGTATTCATGGTTAT+AGG + chr1_1:21191847-21191866 Msa0013740:CDS 30.0%
GCTTGTTCTATTGTTCTTTA+AGG + chr1_1:21191999-21192018 Msa0013740:intron 30.0%
TATGTTGAAACAAACCAAAC+TGG - chr1_1:21192228-21192247 None:intergenic 30.0%
ACTTATTAACCAAGTCTATG+TGG - chr1_1:21192729-21192748 None:intergenic 30.0%
TTCTTCAGAAATGTTGACAT+TGG - chr1_1:21193094-21193113 None:intergenic 30.0%
AGACACAAAAAAATAGATGG+TGG + chr1_1:21193357-21193376 Msa0013740:intron 30.0%
CTTAACTCTTTCAAAGAGAA+AGG - chr1_1:21193656-21193675 None:intergenic 30.0%
! TTCTCTTTGAAAGAGTTAAG+CGG + chr1_1:21193656-21193675 Msa0013740:intron 30.0%
! ATATACTTGGTGAAGAAAGT+GGG + chr1_1:21193686-21193705 Msa0013740:intron 30.0%
ATGGGAAAATATTGTGTTAG+GGG - chr1_1:21193892-21193911 None:intergenic 30.0%
GATGGGAAAATATTGTGTTA+GGG - chr1_1:21193893-21193912 None:intergenic 30.0%
TATTTGTGGTTTCATGTCAT+TGG - chr1_1:21193915-21193934 None:intergenic 30.0%
!! ATCTCCATTTTAGTGAAAGT+TGG + chr1_1:21193987-21194006 Msa0013740:intron 30.0%
TTTCATTGGTCCTTACTATT+GGG - chr1_1:21194084-21194103 None:intergenic 30.0%
! TTTTCATTGGTCCTTACTAT+TGG - chr1_1:21194085-21194104 None:intergenic 30.0%
! TATTATTGACTATTGATGGC+CGG - chr1_1:21194114-21194133 None:intergenic 30.0%
CACGAAGAAATTAGAAACAA+TGG - chr1_1:21194243-21194262 None:intergenic 30.0%
! AATATATCCCCGATTTTCAT+AGG + chr1_1:21194281-21194300 Msa0013740:intron 30.0%
TATCTCTCCACATATTTCTT+GGG - chr1_1:21194444-21194463 None:intergenic 30.0%
ATATCTCTCCACATATTTCT+TGG - chr1_1:21194445-21194464 None:intergenic 30.0%
AGAAATATGTGGAGAGATAT+TGG + chr1_1:21194445-21194464 Msa0013740:CDS 30.0%
!! TTTGTTGTTGAACACCATTT+GGG - chr1_1:21194503-21194522 None:intergenic 30.0%
!! ATTTGTTGTTGAACACCATT+TGG - chr1_1:21194504-21194523 None:intergenic 30.0%
!! TCAACAACAAATATTTTGGG+TGG + chr1_1:21194512-21194531 Msa0013740:intron 30.0%
!! ATATTTTGGGTGGAGAATAA+TGG + chr1_1:21194522-21194541 Msa0013740:intron 30.0%
TGGAGAATAATGGTGATATT+TGG + chr1_1:21194532-21194551 Msa0013740:intron 30.0%
TTTGCAAAGTCTCTCAAATA+TGG + chr1_1:21194576-21194595 Msa0013740:intron 30.0%
TAATGAGAGTGAAATACCAA+AGG + chr1_1:21194749-21194768 Msa0013740:CDS 30.0%
GAAGCTCAAATGATAACAAA+TGG + chr1_1:21194771-21194790 Msa0013740:CDS 30.0%
AAAAAAGGGATTCTCATGAT+TGG - chr1_1:21195067-21195086 None:intergenic 30.0%
TATGATCTTGAAAAGTTGCA+TGG - chr1_1:21195217-21195236 None:intergenic 30.0%
TCTTCTAATTCTATGACTAC+TGG + chr1_1:21195322-21195341 Msa0013740:CDS 30.0%
TACTATTACTAAAGCCATCA+AGG + chr1_1:21195435-21195454 Msa0013740:CDS 30.0%
ACTATTACTAAAGCCATCAA+GGG + chr1_1:21195436-21195455 Msa0013740:CDS 30.0%
AAAAACCTTGCAACTTCTTA+GGG - chr1_1:21195468-21195487 None:intergenic 30.0%
CATGAGAAGGTTATAAAGAA+GGG + chr1_1:21195572-21195591 Msa0013740:intron 30.0%
GTCATGGATCAAAGAAATTA+AGG - chr1_1:21195749-21195768 None:intergenic 30.0%
CATGACAAGGTTATAAAGAA+GGG + chr1_1:21195954-21195973 Msa0013740:intron 30.0%
GTCATGGATCAAAGAAATTA+AGG - chr1_1:21195749-21195768 None:intergenic 30.0%
AATTTCTTTGATCCATGACA+AGG + chr1_1:21195750-21195769 Msa0013740:intron 30.0%
CATGACAAGGTTATAAAGAA+GGG + chr1_1:21195954-21195973 Msa0013740:intron 30.0%
GTGATAAGAATATTCTATGG+AGG + chr1_1:21196471-21196490 Msa0013740:CDS 30.0%
CATTAAAACATGCAAATGTC+GGG + chr1_1:21196819-21196838 Msa0013740:intron 30.0%
ATTAAAACATGCAAATGTCG+GGG + chr1_1:21196820-21196839 Msa0013740:intron 30.0%
!!! ATCTAATAGTTTTTTGGTGG+TGG - chr1_1:21196857-21196876 None:intergenic 30.0%
TTGCTTTGTGTTGAATCTTA+TGG + chr1_1:21197173-21197192 Msa0013740:intron 30.0%
GACATGGATCAAAGAAATTA+AGG - chr1_1:21197297-21197316 None:intergenic 30.0%
AATTTCTTTGATCCATGTCA+AGG + chr1_1:21197298-21197317 Msa0013740:intron 30.0%
CATGTCAAGGTTATAAAGAA+GGG + chr1_1:21197311-21197330 Msa0013740:intron 30.0%
TTTATATTGGGAAAGAGAAG+GGG + chr1_1:21197684-21197703 Msa0013740:intron 30.0%
GATGAAACACAATACATTCA+AGG + chr1_1:21198177-21198196 Msa0013740:intron 30.0%
! ACACAATACATTCAAGGTTT+TGG + chr1_1:21198183-21198202 Msa0013740:intron 30.0%
TTTATGTAATTAACCCTACC+GGG - chr1_1:21198222-21198241 None:intergenic 30.0%
TTCAGAATTAGCTCAAAATC+GGG - chr1_1:21198364-21198383 None:intergenic 30.0%
CTTCAGAATTAGCTCAAAAT+CGG - chr1_1:21198365-21198384 None:intergenic 30.0%
ATTATGTGGTGTAGAAAAAC+AGG + chr1_1:21198545-21198564 Msa0013740:intron 30.0%
TTATGTGGTGTAGAAAAACA+GGG + chr1_1:21198546-21198565 Msa0013740:intron 30.0%
! ATAAACCCTAGTTTGTATGT+TGG - chr1_1:21198580-21198599 None:intergenic 30.0%
GGTTTATAGAGAAATTCTCT+TGG + chr1_1:21198593-21198612 Msa0013740:intron 30.0%
! CTCATATCATTATAGTGGAA+CGG + chr1_1:21198767-21198786 Msa0013740:intron 30.0%
!!! CATCAGTTTTATTATTGGTG+TGG + chr1_1:21198948-21198967 Msa0013740:intron 30.0%
AAATCAATAACCAGGTATCA+TGG + chr1_1:21199020-21199039 Msa0013740:intron 30.0%
AATCAATAACCAGGTATCAT+GGG + chr1_1:21199021-21199040 Msa0013740:intron 30.0%
TTCAAGGATACTATGCTTTA+TGG + chr1_1:21199510-21199529 Msa0013740:intron 30.0%
TTTGAACTTGGTTAACTCTT+TGG - chr1_1:21199583-21199602 None:intergenic 30.0%
! TGTTTTCTTTGTCACAACTA+TGG + chr1_1:21199738-21199757 Msa0013740:intron 30.0%
!! AAAGGAGTACTTTGAAACTT+TGG + chr1_1:21199935-21199954 Msa0013740:intron 30.0%
AATAAGGCTTGCAAAATTCA+AGG + chr1_1:21199993-21200012 Msa0013740:intron 30.0%
TATTGTACTAGAATTGAACG+TGG + chr1_1:21200134-21200153 Msa0013740:intron 30.0%
GTGCATTAGTTATAGCTAAA+GGG + chr1_1:21200177-21200196 Msa0013740:intron 30.0%
TTCTGTGATAATTGCACATT+AGG + chr1_1:21200386-21200405 Msa0013740:intron 30.0%
CATCATCAGTTAAAACTCAT+GGG + chr1_1:21200492-21200511 Msa0013740:intron 30.0%
ATCATCAGTTAAAACTCATG+GGG + chr1_1:21200493-21200512 Msa0013740:intron 30.0%
! ATGATTATTCTAGAAGGGTA+TGG + chr1_1:21200543-21200562 Msa0013740:intron 30.0%
! TGATTATTCTAGAAGGGTAT+GGG + chr1_1:21200544-21200563 Msa0013740:intron 30.0%
GGTAGAAAAAATTCAGTTTG+AGG + chr1_1:21201186-21201205 Msa0013740:intron 30.0%
AGAAAAAATTCAGTTTGAGG+TGG + chr1_1:21201189-21201208 Msa0013740:intron 30.0%
ATTAATCCACCTGTTAGATA+CGG + chr1_1:21201328-21201347 Msa0013740:intron 30.0%
CATTCAAAGCATAACATATG+AGG - chr1_1:21201363-21201382 None:intergenic 30.0%
GAATGAGGAAATACTTTCAT+TGG + chr1_1:21201468-21201487 Msa0013740:intron 30.0%
! ATAGAACAATGTTTTACCAC+CGG - chr1_1:21201674-21201693 None:intergenic 30.0%
!! TTGTTCTATAAGGGTACTTA+TGG + chr1_1:21201685-21201704 Msa0013740:intron 30.0%
TGATCTTGAGTTAGAACAAA+TGG + chr1_1:21201724-21201743 Msa0013740:intron 30.0%
CTGTTGAAGAAATCTTTGTA+TGG + chr1_1:21201839-21201858 Msa0013740:intron 30.0%
ATAGTTGTGTTTACATGATG+AGG + chr1_1:21201942-21201961 Msa0013740:intron 30.0%
TATCATCTACATAAAGGAGA+AGG - chr1_1:21201991-21202010 None:intergenic 30.0%
! GAATTTGAAATGAAGGATCT+TGG + chr1_1:21202070-21202089 Msa0013740:intron 30.0%
TACTTGGTATGGATATCATA+AGG + chr1_1:21202107-21202126 Msa0013740:intron 30.0%
ACTTGGTATGGATATCATAA+GGG + chr1_1:21202108-21202127 Msa0013740:intron 30.0%
CGATGAAGAGAAAAACAATA+TGG + chr1_1:21202273-21202292 Msa0013740:intron 30.0%
TGAAGAGAAAAACAATATGG+AGG + chr1_1:21202276-21202295 Msa0013740:intron 30.0%
GAAGAGAAAAACAATATGGA+GGG + chr1_1:21202277-21202296 Msa0013740:intron 30.0%
ACTTATCACACTTATTGCAT+AGG - chr1_1:21202368-21202387 None:intergenic 30.0%
ATGCAATAAGTGTGATAAGT+CGG + chr1_1:21202368-21202387 Msa0013740:intron 30.0%
GACACTAGAAAATCTTTATC+AGG + chr1_1:21202547-21202566 Msa0013740:intron 30.0%
!! GGTTTTGTGTTTACTTTGTT+CGG + chr1_1:21202568-21202587 Msa0013740:intron 30.0%
AATCATACCTTTCAACCATA+TGG - chr1_1:21202689-21202708 None:intergenic 30.0%
! ATATGGTTGAAAGGTATGAT+TGG + chr1_1:21202688-21202707 Msa0013740:intron 30.0%
! AAAGGTATGATTGGAGAAAT+GGG + chr1_1:21202697-21202716 Msa0013740:intron 30.0%
! AAGGTGTTTGATGGTTAAAT+TGG + chr1_1:21202994-21203013 Msa0013740:intron 30.0%
TTCAGAATTAGCTCAAAATC+GGG - chr1_1:21198364-21198383 None:intergenic 30.0%
CTTCAGAATTAGCTCAAAAT+CGG - chr1_1:21198365-21198384 None:intergenic 30.0%
ATTATGTGGTGTAGAAAAAC+AGG + chr1_1:21198545-21198564 Msa0013740:intron 30.0%
TTATGTGGTGTAGAAAAACA+GGG + chr1_1:21198546-21198565 Msa0013740:intron 30.0%
! ATAAACCCTAGTTTGTATGT+TGG - chr1_1:21198580-21198599 None:intergenic 30.0%
GGTTTATAGAGAAATTCTCT+TGG + chr1_1:21198593-21198612 Msa0013740:intron 30.0%
! CTCATATCATTATAGTGGAA+CGG + chr1_1:21198767-21198786 Msa0013740:intron 30.0%
!!! CATCAGTTTTATTATTGGTG+TGG + chr1_1:21198948-21198967 Msa0013740:intron 30.0%
AAATTGTGGAGTTGAAAATG+GGG + chr1_1:21203834-21203853 Msa0013740:intron 30.0%
ATTTATGGAAGAATGCAAAG+TGG + chr1_1:21203931-21203950 Msa0013740:CDS 30.0%
!! TTCTGAAATTCTTGTTGCAG+AGG + chr1_1:21187681-21187700 Msa0013740:intron 35.0%
AAGTTCTCCACAAACTTCTT+GGG - chr1_1:21187710-21187729 None:intergenic 35.0%
AAAGTTCTCCACAAACTTCT+TGG - chr1_1:21187711-21187730 None:intergenic 35.0%
! AGAAGTTTGTGGAGAACTTT+TGG + chr1_1:21187711-21187730 Msa0013740:CDS 35.0%
!! TTTGTGGAGAACTTTTGGAA+AGG + chr1_1:21187716-21187735 Msa0013740:CDS 35.0%
! TTGCTTGTTGAACACCATTT+GGG - chr1_1:21187769-21187788 None:intergenic 35.0%
! ATTGCTTGTTGAACACCATT+TGG - chr1_1:21187770-21187789 None:intergenic 35.0%
!! TCAACAAGCAATATTTTGGG+TGG + chr1_1:21187778-21187797 Msa0013740:CDS 35.0%
!! ATATTTTGGGTGGAGAGTAA+TGG + chr1_1:21187788-21187807 Msa0013740:CDS 35.0%
TGGAGAGTAATGGTGATATT+TGG + chr1_1:21187798-21187817 Msa0013740:CDS 35.0%
GCTACAGAAAAAGCTAAAGA+AGG + chr1_1:21187980-21187999 Msa0013740:CDS 35.0%
! TTTTCTTGTCCTTTGAGCTT+GGG - chr1_1:21188059-21188078 None:intergenic 35.0%
! TTTTTCTTGTCCTTTGAGCT+TGG - chr1_1:21188060-21188079 None:intergenic 35.0%
GCTCAAAGGACAAGAAAAAA+TGG + chr1_1:21188061-21188080 Msa0013740:CDS 35.0%
TGGCAAGAGAAAAAATAGTG+TGG + chr1_1:21188081-21188100 Msa0013740:CDS 35.0%
! AAGAACTCACCTGAGAATTT+TGG - chr1_1:21188124-21188143 None:intergenic 35.0%
! TTCTCCTTTTCTTTCTTGCT+AGG + chr1_1:21188182-21188201 Msa0013740:intron 35.0%
GAGGACCAAAAATGCAAAAA+TGG - chr1_1:21188553-21188572 None:intergenic 35.0%
TGACTTGATCAAAATTGGTC+TGG - chr1_1:21188575-21188594 None:intergenic 35.0%
CGTAAAATTGTGATACTTGG+GGG + chr1_1:21188661-21188680 Msa0013740:intron 35.0%
TGATTGGGTTAATGCATACT+TGG - chr1_1:21188730-21188749 None:intergenic 35.0%
!!! CCTTCAGACCAATTTTGATT+GGG - chr1_1:21188745-21188764 None:intergenic 35.0%
! CCAATCAAAATTGGTCTGAA+GGG + chr1_1:21188743-21188762 Msa0013740:intron 35.0%
! TGAAGGGTCAAAAGTGTAAA+AGG + chr1_1:21188759-21188778 Msa0013740:intron 35.0%
! GAAGGGTCAAAAGTGTAAAA+GGG + chr1_1:21188760-21188779 Msa0013740:intron 35.0%
! AAGGGTCAAAAGTGTAAAAG+GGG + chr1_1:21188761-21188780 Msa0013740:intron 35.0%
TGTAAAAGGGGGTAAACTTA+GGG + chr1_1:21188773-21188792 Msa0013740:intron 35.0%
TGATGAGTATATTCCTTTGC+AGG + chr1_1:21188987-21189006 Msa0013740:intron 35.0%
CTCTCATTAACAACTTCAAC+TGG - chr1_1:21189056-21189075 None:intergenic 35.0%
GTTGAAGTTGTTAATGAGAG+TGG + chr1_1:21189056-21189075 Msa0013740:CDS 35.0%
GGTCCATGATGAATTGAAAT+AGG + chr1_1:21189251-21189270 Msa0013740:intron 35.0%
TGTGCTCTTGAAAAATCACT+TGG - chr1_1:21189282-21189301 None:intergenic 35.0%
GGGATCAAAGAAAAAGAAGT+TGG - chr1_1:21189636-21189655 None:intergenic 35.0%
TTTCTTTGATCCCAATTACC+AGG + chr1_1:21189643-21189662 Msa0013740:intron 35.0%
GGTGATAATCCAAAGAGAAA+AGG + chr1_1:21189691-21189710 Msa0013740:CDS 35.0%
! CCTTCAAATCCTTTTCTCTT+TGG - chr1_1:21189703-21189722 None:intergenic 35.0%
CCAAAGAGAAAAGGATTTGA+AGG + chr1_1:21189700-21189719 Msa0013740:CDS 35.0%
AAGGATTTGAAGGAACTTCT+AGG + chr1_1:21189710-21189729 Msa0013740:CDS 35.0%
!! AATGCTTAAAGAGTGTCTCA+GGG - chr1_1:21190150-21190169 None:intergenic 35.0%
!! AAATGCTTAAAGAGTGTCTC+AGG - chr1_1:21190151-21190170 None:intergenic 35.0%
AAATAGGGAAACGTTAACTG+AGG - chr1_1:21190279-21190298 None:intergenic 35.0%
TGATGAGTGTATTACTTTGC+AGG + chr1_1:21190417-21190436 Msa0013740:intron 35.0%
AGTGTATTACTTTGCAGGTA+GGG + chr1_1:21190422-21190441 Msa0013740:intron 35.0%
CTCTCATTAACAACTTCAAC+TGG - chr1_1:21189056-21189075 None:intergenic 35.0%
TTGTCAAAATCTTACGTCCA+TGG + chr1_1:21190540-21190559 Msa0013740:CDS 35.0%
ATAGTAACGGTGAATGAAAG+TGG - chr1_1:21190909-21190928 None:intergenic 35.0%
CCTTGATGGAGTAATAGTAA+CGG - chr1_1:21190922-21190941 None:intergenic 35.0%
CGTTACTATTACTCCATCAA+GGG + chr1_1:21190920-21190939 Msa0013740:CDS 35.0%
ATTCTTTGATCCCAATTACC+AGG + chr1_1:21191070-21191089 Msa0013740:intron 35.0%
ATCCCAATTACCAGGTTATA+AGG + chr1_1:21189651-21189670 Msa0013740:intron 35.0%
CTTCCTTATAACCTGGTAAT+TGG - chr1_1:21191084-21191103 None:intergenic 35.0%
CAATTACCAGGTTATAAGGA+AGG + chr1_1:21191082-21191101 Msa0013740:intron 35.0%
TGAATTATCACCACAAGAAG+AGG - chr1_1:21191110-21191129 None:intergenic 35.0%
!! TTTCAAGATGATTTGTTGGG+CGG - chr1_1:21191165-21191184 None:intergenic 35.0%
ACATTATCACCTTCTGAATC+TGG - chr1_1:21191591-21191610 None:intergenic 35.0%
! CCTCTTTTCATAAACTCCTT+TGG - chr1_1:21191762-21191781 None:intergenic 35.0%
CCAAAGGAGTTTATGAAAAG+AGG + chr1_1:21191759-21191778 Msa0013740:CDS 35.0%
!! AAACTCTCTGGAGTTGAAAA+TGG + chr1_1:21191791-21191810 Msa0013740:CDS 35.0%
!! AACTCTCTGGAGTTGAAAAT+GGG + chr1_1:21191792-21191811 Msa0013740:CDS 35.0%
AAAGAATGCAAAGTGGAGAT+TGG + chr1_1:21191897-21191916 Msa0013740:CDS 35.0%
ACAATAGAACAAGCAGCTAA+GGG - chr1_1:21191993-21192012 None:intergenic 35.0%
AACAATAGAACAAGCAGCTA+AGG - chr1_1:21191994-21192013 None:intergenic 35.0%
TTGCATTCATGGCTTGAATA+TGG + chr1_1:21192515-21192534 Msa0013740:intron 35.0%
AAACACGATTGCTTGCTTAA+AGG + chr1_1:21192581-21192600 Msa0013740:intron 35.0%
! CACCAATTTGTTTGACATTC+AGG + chr1_1:21192606-21192625 Msa0013740:intron 35.0%
ATTATCGATCCACATAGACT+TGG + chr1_1:21192717-21192736 Msa0013740:intron 35.0%
GATGCTAGTTGCAAAACAAT+GGG - chr1_1:21192945-21192964 None:intergenic 35.0%
TGATGCTAGTTGCAAAACAA+TGG - chr1_1:21192946-21192965 None:intergenic 35.0%
AACTCTTCATTTCTTCGAGT+TGG - chr1_1:21193475-21193494 None:intergenic 35.0%
! CATATACTTGGTGAAGAAAG+TGG + chr1_1:21193685-21193704 Msa0013740:intron 35.0%
! TATACTTGGTGAAGAAAGTG+GGG + chr1_1:21193687-21193706 Msa0013740:intron 35.0%
TGGGAAAATATTGTGTTAGG+GGG - chr1_1:21193891-21193910 None:intergenic 35.0%
GGATGGGAAAATATTGTGTT+AGG - chr1_1:21193894-21193913 None:intergenic 35.0%
TGTATGTCTAATTGGGACTT+GGG - chr1_1:21193955-21193974 None:intergenic 35.0%
! TGGGAAGTGTATGTCTAATT+GGG - chr1_1:21193962-21193981 None:intergenic 35.0%
! TTGGGAAGTGTATGTCTAAT+TGG - chr1_1:21193963-21193982 None:intergenic 35.0%
TGAGCCAACTTTCACTAAAA+TGG - chr1_1:21193994-21194013 None:intergenic 35.0%
! AAGTTGGCTCATCATACAAT+TGG + chr1_1:21194003-21194022 Msa0013740:intron 35.0%
GAGAATTCCCAAGAAATATG+TGG + chr1_1:21194434-21194453 Msa0013740:intron 35.0%
TATGTGGAGAGATATTGGAA+AGG + chr1_1:21194450-21194469 Msa0013740:CDS 35.0%
GAACACCATTTGGGAATTTA+AGG - chr1_1:21194494-21194513 None:intergenic 35.0%
! TATTGGCGGATCATATTTCA+AGG + chr1_1:21194620-21194639 Msa0013740:intron 35.0%
GTTATCATTTGAGCTTCCTT+TGG - chr1_1:21194768-21194787 None:intergenic 35.0%
ACTCTTAAGCAAAAATTCCC+AGG + chr1_1:21194822-21194841 Msa0013740:CDS 35.0%
! CAAATGAAGTTTTCTCACCT+GGG - chr1_1:21194842-21194861 None:intergenic 35.0%
! TCAAATGAAGTTTTCTCACC+TGG - chr1_1:21194843-21194862 None:intergenic 35.0%
CAAATTAACTCTAAGCAGGT+AGG + chr1_1:21194977-21194996 Msa0013740:intron 35.0%
ACTTACCAAGATATGACCAT+GGG - chr1_1:21195115-21195134 None:intergenic 35.0%
TACTTACCAAGATATGACCA+TGG - chr1_1:21195116-21195135 None:intergenic 35.0%
TGTGGTTCATGAATTGAAAC+AGG + chr1_1:21195186-21195205 Msa0013740:intron 35.0%
CTAATTCTATGACTACTGGT+TGG + chr1_1:21195326-21195345 Msa0013740:CDS 35.0%
GAAAAACCTTGCAACTTCTT+AGG - chr1_1:21195469-21195488 None:intergenic 35.0%
! AGTTGCAAGGTTTTTCTTTC+TGG + chr1_1:21195473-21195492 Msa0013740:intron 35.0%
CTTCTCATGGATCAATGAAT+AGG - chr1_1:21195561-21195580 None:intergenic 35.0%
CTATTCATTGATCCATGAGA+AGG + chr1_1:21195559-21195578 Msa0013740:intron 35.0%
CCTTCTTTATAACCTTCTCA+TGG - chr1_1:21195574-21195593 None:intergenic 35.0%
CCATGAGAAGGTTATAAAGA+AGG + chr1_1:21195571-21195590 Msa0013740:intron 35.0%
TATAAAGAAGGGATCTCTTC+TGG + chr1_1:21195583-21195602 Msa0013740:CDS 35.0%
! GTGATCGTGATATTCTAAAG+AGG + chr1_1:21195605-21195624 Msa0013740:CDS 35.0%
! ATTCTAAAGAGGAAAGACAC+CGG + chr1_1:21195616-21195635 Msa0013740:CDS 35.0%
!! AAGAGAATGCACTTTTGGAA+GGG - chr1_1:21195656-21195675 None:intergenic 35.0%
! GTGATCGTGATATTCTAAAG+AGG + chr1_1:21195605-21195624 Msa0013740:CDS 35.0%
! ATTCTAAAGAGGAAAGACAC+TGG + chr1_1:21195616-21195635 Msa0013740:CDS 35.0%
AAGACACTGGAGAAACTTAT+AGG + chr1_1:21195820-21195839 Msa0013740:CDS 35.0%
CCTTCTTTATAACCTTGTCA+TGG - chr1_1:21195956-21195975 None:intergenic 35.0%
CCATGACAAGGTTATAAAGA+AGG + chr1_1:21195953-21195972 Msa0013740:intron 35.0%
TATAAAGAAGGGATCTCTTC+TGG + chr1_1:21195583-21195602 Msa0013740:CDS 35.0%
GTCGTGGATCAAAGAAATTA+AGG - chr1_1:21196131-21196150 None:intergenic 35.0%
AATTTCTTTGATCCACGACA+AGG + chr1_1:21196132-21196151 Msa0013740:intron 35.0%
ACTTCTTTATAACCTTGTCG+TGG - chr1_1:21196147-21196166 None:intergenic 35.0%
! ATTCTAAAGAGGAAAGACAC+CGG + chr1_1:21195616-21195635 Msa0013740:CDS 35.0%
AAGAAGTTAGAAGAATACCC+TGG - chr1_1:21196251-21196270 None:intergenic 35.0%
CCTTCTTTATAACCTTGTCA+TGG - chr1_1:21195956-21195975 None:intergenic 35.0%
CCATGACAAGGTTATAAAGA+AGG + chr1_1:21195953-21195972 Msa0013740:intron 35.0%
ATTCTATGGAGGAAAGACAA+TGG + chr1_1:21196482-21196501 Msa0013740:CDS 35.0%
AAGACAATGGAGAAACATCT+AGG + chr1_1:21196495-21196514 Msa0013740:CDS 35.0%
! TGAGCTTAGTTCAGTTGATA+TGG + chr1_1:21196790-21196809 Msa0013740:intron 35.0%
CCTTCTTTATAACCTTGACA+TGG - chr1_1:21197313-21197332 None:intergenic 35.0%
CCATGTCAAGGTTATAAAGA+AGG + chr1_1:21197310-21197329 Msa0013740:intron 35.0%
!!! TTAGATCATGCAGTTTTGGA+CGG - chr1_1:21197396-21197415 None:intergenic 35.0%
! CTCTTTAGATCATGCAGTTT+TGG - chr1_1:21197400-21197419 None:intergenic 35.0%
!! CTCTAAAATTATACTCCCTC+CGG + chr1_1:21197525-21197544 Msa0013740:intron 35.0%
GAAATTTGGGTCAACAAAAG+TGG + chr1_1:21197562-21197581 Msa0013740:intron 35.0%
TCAACAAAAGTGGATGTATC+TGG + chr1_1:21197572-21197591 Msa0013740:intron 35.0%
!! TAACCATTTGGTTGGTTTGA+TGG + chr1_1:21198031-21198050 Msa0013740:intron 35.0%
! TCCCAAGTGTCAATTTTTGT+AGG + chr1_1:21198072-21198091 Msa0013740:intron 35.0%
GCCTACAAAAATTGACACTT+GGG - chr1_1:21198076-21198095 None:intergenic 35.0%
AGCCTACAAAAATTGACACT+TGG - chr1_1:21198077-21198096 None:intergenic 35.0%
! CGATTTTGAGCTAATTCTGA+AGG + chr1_1:21198363-21198382 Msa0013740:intron 35.0%
GCCTGTGATACTGTAAAAAT+CGG + chr1_1:21198385-21198404 Msa0013740:intron 35.0%
!!! AAAACAGTTTTTTCATGGGC+CGG + chr1_1:21198459-21198478 Msa0013740:intron 35.0%
!!! TGTTCCGTTTGGTTTTTTGA+GGG + chr1_1:21198485-21198504 Msa0013740:intron 35.0%
CCACATAATCATCTGATACA+AGG - chr1_1:21198534-21198553 None:intergenic 35.0%
CCTTGTATCAGATGATTATG+TGG + chr1_1:21198531-21198550 Msa0013740:intron 35.0%
TAGAAGCCAACATACAAACT+AGG + chr1_1:21198571-21198590 Msa0013740:intron 35.0%
AGAAGCCAACATACAAACTA+GGG + chr1_1:21198572-21198591 Msa0013740:intron 35.0%
! ACCTTGAACAAAGCACTATT+AGG + chr1_1:21198648-21198667 Msa0013740:intron 35.0%
! TCCTAATAGTGCTTTGTTCA+AGG - chr1_1:21198652-21198671 None:intergenic 35.0%
ACTATTAGGATTGAGTCTCT+TGG + chr1_1:21198662-21198681 Msa0013740:intron 35.0%
AAGAATCTGTTTACCCAGTT+CGG - chr1_1:21198830-21198849 None:intergenic 35.0%
ATACCAAGCAATCAATCAAG+CGG - chr1_1:21198914-21198933 None:intergenic 35.0%
CCAATAATAAAACTGATGCG+TGG - chr1_1:21198946-21198965 None:intergenic 35.0%
!!! CCACGCATCAGTTTTATTAT+TGG + chr1_1:21198943-21198962 Msa0013740:intron 35.0%
TGGGACATTGAAAAGTTTAC+CGG + chr1_1:21199051-21199070 Msa0013740:intron 35.0%
!! AAAGTGTGTTGAAGCATTGA+AGG + chr1_1:21199128-21199147 Msa0013740:intron 35.0%
!! AAGTGTGTTGAAGCATTGAA+GGG + chr1_1:21199129-21199148 Msa0013740:intron 35.0%
!! ACAACTCTACTTTTACCGAA+TGG + chr1_1:21199350-21199369 Msa0013740:intron 35.0%
TACTATGCTTTATGGCAAAG+AGG + chr1_1:21199518-21199537 Msa0013740:intron 35.0%
ACTATGCTTTATGGCAAAGA+GGG + chr1_1:21199519-21199538 Msa0013740:intron 35.0%
AACCAAGTTCAAAGAGTTGA+AGG + chr1_1:21199590-21199609 Msa0013740:intron 35.0%
AACCTTCAACTCTTTGAACT+TGG - chr1_1:21199595-21199614 None:intergenic 35.0%
AAGAAGTGAAAACAGAGGAA+AGG + chr1_1:21199650-21199669 Msa0013740:intron 35.0%
AGAAGTGAAAACAGAGGAAA+GGG + chr1_1:21199651-21199670 Msa0013740:intron 35.0%
! GTTTCAAAGTACTCCTTTCT+CGG - chr1_1:21199933-21199952 None:intergenic 35.0%
! TGTTCGCCTTGGTAATAATA+AGG + chr1_1:21199977-21199996 Msa0013740:intron 35.0%
!! TGCAAGCCTTATTATTACCA+AGG - chr1_1:21199986-21200005 None:intergenic 35.0%
GCTTGCAAAATTCAAGGTAT+GGG + chr1_1:21199999-21200018 Msa0013740:intron 35.0%
!! GGTCATCAAACATTTTGAGA+CGG - chr1_1:21200031-21200050 None:intergenic 35.0%
CATCCTTCAAAAGGAAATCA+CGG - chr1_1:21200052-21200071 None:intergenic 35.0%
!! ATTTCCTTTTGAAGGATGTG+AGG + chr1_1:21200054-21200073 Msa0013740:intron 35.0%
TATACCTCACATCCTTCAAA+AGG - chr1_1:21200061-21200080 None:intergenic 35.0%
! ATAAGCATGTTTGATGGTCT+AGG + chr1_1:21200110-21200129 Msa0013740:intron 35.0%
GGTATGATGAGAATTTCTCA+TGG + chr1_1:21200155-21200174 Msa0013740:intron 35.0%
GGTGCATTAGTTATAGCTAA+AGG + chr1_1:21200176-21200195 Msa0013740:intron 35.0%
! GCTAAAGGGTCTAAAATACA+TGG + chr1_1:21200191-21200210 Msa0013740:intron 35.0%
TTAGATGGTTCCACTGTTAT+AGG + chr1_1:21200224-21200243 Msa0013740:intron 35.0%
TAACTAAACTGTGGCATTTG+AGG + chr1_1:21200282-21200301 Msa0013740:intron 35.0%
!! TAGCTAAACAAGGTTTGCTA+GGG + chr1_1:21200339-21200358 Msa0013740:intron 35.0%
AAACAACACAAGGTGAAGTT+TGG + chr1_1:21200410-21200429 Msa0013740:intron 35.0%
AACAACACAAGGTGAAGTTT+GGG + chr1_1:21200411-21200430 Msa0013740:intron 35.0%
!!! CCATGAGTTTTAACTGATGA+TGG - chr1_1:21200494-21200513 None:intergenic 35.0%
CCATCATCAGTTAAAACTCA+TGG + chr1_1:21200491-21200510 Msa0013740:intron 35.0%
TCATCAGTTAAAACTCATGG+GGG + chr1_1:21200494-21200513 Msa0013740:intron 35.0%
!! AAAGTGTTGAGAACTGACAA+TGG + chr1_1:21200653-21200672 Msa0013740:intron 35.0%
! AGCAGTTTAATGAGTTTTGC+AGG + chr1_1:21200693-21200712 Msa0013740:intron 35.0%
AAGAATGAACATGACCTTGT+TGG + chr1_1:21200778-21200797 Msa0013740:intron 35.0%
ATTAACAGATGTCCATCAAC+AGG + chr1_1:21200881-21200900 Msa0013740:intron 35.0%
TTAACAGATGTCCATCAACA+GGG + chr1_1:21200882-21200901 Msa0013740:intron 35.0%
TTAAGATCTATCCCTGTTGA+TGG - chr1_1:21200896-21200915 None:intergenic 35.0%
GATAGATCTTAAGACACCTA+TGG + chr1_1:21200904-21200923 Msa0013740:intron 35.0%
! TTAAGACACCTATGGAGTTT+TGG + chr1_1:21200912-21200931 Msa0013740:intron 35.0%
TTCAAATTAGAGTAGTCTGC+CGG - chr1_1:21200947-21200966 None:intergenic 35.0%
!! ATTTTCATGGGTTATCCTGA+AGG + chr1_1:21201034-21201053 Msa0013740:intron 35.0%
! AGTCAGGATCAATTGTTTCT+TGG - chr1_1:21201276-21201295 None:intergenic 35.0%
AAAGCAATGAAAGAAAGGAC+TGG + chr1_1:21201434-21201453 Msa0013740:intron 35.0%
ATGAAACAAGTTTCCAAGTC+TGG - chr1_1:21201501-21201520 None:intergenic 35.0%
TGGGTGTTTAAGAAGAAAGA+AGG + chr1_1:21201553-21201572 Msa0013740:intron 35.0%
! AAGAAGAAAGAAGGTATACC+AGG + chr1_1:21201562-21201581 Msa0013740:intron 35.0%
! AGAAGAAAGAAGGTATACCA+GGG + chr1_1:21201563-21201582 Msa0013740:intron 35.0%
ACAAGTCTTGCTTTATACCT+TGG - chr1_1:21201598-21201617 None:intergenic 35.0%
TAAAGCAAGACTTGTAGCAA+AGG + chr1_1:21201603-21201622 Msa0013740:intron 35.0%
AAAGCAAGACTTGTAGCAAA+GGG + chr1_1:21201604-21201623 Msa0013740:intron 35.0%
ATCTATATGCAACAACCAGA+AGG + chr1_1:21201788-21201807 Msa0013740:intron 35.0%
GTTTGATGAGTTCCTAGTAA+AGG + chr1_1:21201895-21201914 Msa0013740:intron 35.0%
! AGAACAACTCACCTTTGTTT+CGG - chr1_1:21202135-21202154 None:intergenic 35.0%
GTTCAGAATGAGAGATTCTA+AGG + chr1_1:21202192-21202211 Msa0013740:intron 35.0%
! TTTTTCTCTTCATCGGATTG+AGG - chr1_1:21202268-21202287 None:intergenic 35.0%
CTTATTGCATAGGATAAGTC+CGG - chr1_1:21202358-21202377 None:intergenic 35.0%
! AAGTGTGATAAGTCGGTTTA+TGG + chr1_1:21202375-21202394 Msa0013740:intron 35.0%
!! TGGGTTCTGAGATATTTGAA+TGG + chr1_1:21202433-21202452 Msa0013740:intron 35.0%
!! GGGTTCTGAGATATTTGAAT+GGG + chr1_1:21202434-21202453 Msa0013740:intron 35.0%
TATTTGAATGGGACTTTGAC+AGG + chr1_1:21202445-21202464 Msa0013740:intron 35.0%
AAGTATACAAAGTCACAACC+AGG + chr1_1:21202475-21202494 Msa0013740:intron 35.0%
! GAAAGGTATGATTGGAGAAA+TGG + chr1_1:21202696-21202715 Msa0013740:intron 35.0%
AAGGTATGATTGGAGAAATG+GGG + chr1_1:21202698-21202717 Msa0013740:intron 35.0%
! CTGATGATTTGCCAAATGAA+TGG - chr1_1:21202767-21202786 None:intergenic 35.0%
CATTCATTTGGCAAATCATC+AGG + chr1_1:21202765-21202784 Msa0013740:intron 35.0%
TAGAGACATGATTGAGACAA+AGG + chr1_1:21202834-21202853 Msa0013740:intron 35.0%
CTTCATTGAAGCATAGATGA+AGG + chr1_1:21202957-21202976 Msa0013740:intron 35.0%
ATTGAAGCATAGATGAAGGT+TGG + chr1_1:21202961-21202980 Msa0013740:intron 35.0%
! AATTGGCATCATCACCATTT+TGG + chr1_1:21203011-21203030 Msa0013740:intron 35.0%
! CGATTTTGAGCTAATTCTGA+AGG + chr1_1:21198363-21198382 Msa0013740:intron 35.0%
GCCTGTGATACTGTAAAAAT+CGG + chr1_1:21198385-21198404 Msa0013740:intron 35.0%
!!! AAAACAGTTTTTTCATGGGC+CGG + chr1_1:21198459-21198478 Msa0013740:intron 35.0%
!!! TGTTCCGTTTGGTTTTTTGA+GGG + chr1_1:21198485-21198504 Msa0013740:intron 35.0%
CCACATAATCATCTGATACA+AGG - chr1_1:21198534-21198553 None:intergenic 35.0%
CCTTGTATCAGATGATTATG+TGG + chr1_1:21198531-21198550 Msa0013740:intron 35.0%
TAGAAGCCAACATACAAACT+AGG + chr1_1:21198571-21198590 Msa0013740:intron 35.0%
AGAAGCCAACATACAAACTA+GGG + chr1_1:21198572-21198591 Msa0013740:intron 35.0%
! ACCTTGAACAAAGCACTATT+AGG + chr1_1:21198648-21198667 Msa0013740:intron 35.0%
! TCCTAATAGTGCTTTGTTCA+AGG - chr1_1:21198652-21198671 None:intergenic 35.0%
ACTATTAGGATTGAGTCTCT+TGG + chr1_1:21198662-21198681 Msa0013740:intron 35.0%
AAGAATCTGTTTACCCAGTT+CGG - chr1_1:21198830-21198849 None:intergenic 35.0%
ATACCAAGCAATCAATCAAG+CGG - chr1_1:21198914-21198933 None:intergenic 35.0%
CCAATAATAAAACTGATGCG+TGG - chr1_1:21198946-21198965 None:intergenic 35.0%
!!! CCACGCATCAGTTTTATTAT+TGG + chr1_1:21198943-21198962 Msa0013740:intron 35.0%
CCTCTTTCCATAAATCTCTT+CGG - chr1_1:21203803-21203822 None:intergenic 35.0%
AGGATGTCGTGAAAAAATTG+TGG + chr1_1:21203820-21203839 Msa0013740:intron 35.0%
AATTGTGGAGTTGAAAATGG+GGG + chr1_1:21203835-21203854 Msa0013740:intron 35.0%
GAAGAATGCAAAGTGGAAAT+TGG + chr1_1:21203938-21203957 Msa0013740:CDS 35.0%
GAACACCATTTGGGAATTGA+AGG - chr1_1:21187760-21187779 None:intergenic 40.0%
CATAGGTGGATCATGTTTCA+AGG + chr1_1:21187886-21187905 Msa0013740:intron 40.0%
AAAGAAGGAGTTGAAGTGAG+TGG + chr1_1:21187995-21188014 Msa0013740:CDS 40.0%
ATAAGCTGCATAAAGTGGGA+AGG + chr1_1:21188384-21188403 Msa0013740:intron 40.0%
! CTTGATCAAAATTGGTCTGG+AGG - chr1_1:21188572-21188591 None:intergenic 40.0%
! CCCAATCAAAATTGGTCTGA+AGG + chr1_1:21188742-21188761 Msa0013740:intron 40.0%
!! CCCTTCAGACCAATTTTGAT+TGG - chr1_1:21188746-21188765 None:intergenic 40.0%
! AGGGTCAAAAGTGTAAAAGG+GGG + chr1_1:21188762-21188781 Msa0013740:intron 40.0%
GTGTAAAAGGGGGTAAACTT+AGG + chr1_1:21188772-21188791 Msa0013740:intron 40.0%
GTAAAAGGGGGTAAACTTAG+GGG + chr1_1:21188774-21188793 Msa0013740:intron 40.0%
TGAGTATATTCCTTTGCAGG+TGG + chr1_1:21188990-21189009 Msa0013740:intron 40.0%
GAGTATATTCCTTTGCAGGT+GGG + chr1_1:21188991-21189010 Msa0013740:intron 40.0%
AGTATATTCCTTTGCAGGTG+GGG + chr1_1:21188992-21189011 Msa0013740:intron 40.0%
GGGATTGCAAACTTAAGAGT+TGG + chr1_1:21189318-21189337 Msa0013740:CDS 40.0%
!! TGCAAACTTAAGAGTTGGTG+AGG + chr1_1:21189323-21189342 Msa0013740:CDS 40.0%
!!! AGAAGATCTGTTTTGACCAC+TGG + chr1_1:21189387-21189406 Msa0013740:CDS 40.0%
GTTAAATGACTTCCAACCAG+TGG - chr1_1:21189406-21189425 None:intergenic 40.0%
TGGATTATCACCACAAGAAG+AGG - chr1_1:21189683-21189702 None:intergenic 40.0%
TAGAAACTAAAGGAGGGGAA+AGG + chr1_1:21190042-21190061 Msa0013740:intron 40.0%
!! ATGCTTAAAGAGTGTCTCAG+GGG - chr1_1:21190149-21190168 None:intergenic 40.0%
GAGTGTATTACTTTGCAGGT+AGG + chr1_1:21190421-21190440 Msa0013740:intron 40.0%
TTACCAACATATTGCTGCCA+TGG - chr1_1:21190560-21190579 None:intergenic 40.0%
GGGATTGCAAACTTAAGAGT+TGG + chr1_1:21189318-21189337 Msa0013740:CDS 40.0%
!! TGCAAACTTAAGAGTTGGTG+AGG + chr1_1:21189323-21189342 Msa0013740:CDS 40.0%
AGAAGATCTCTTGTGACTAC+TGG + chr1_1:21190810-21190829 Msa0013740:intron 40.0%
CCGTTACTATTACTCCATCA+AGG + chr1_1:21190919-21190938 Msa0013740:CDS 40.0%
! TTCAAAGTTCTAGCTAGGGT+AGG + chr1_1:21191375-21191394 Msa0013740:intron 40.0%
! TCAAAGTTCTAGCTAGGGTA+GGG + chr1_1:21191376-21191395 Msa0013740:intron 40.0%
TGTGTTTCTCCAGATTCAGA+AGG + chr1_1:21191579-21191598 Msa0013740:intron 40.0%
AGGAAGTCATGAAAACTCTC+TGG + chr1_1:21191779-21191798 Msa0013740:CDS 40.0%
!! ACTCTCTGGAGTTGAAAATG+GGG + chr1_1:21191793-21191812 Msa0013740:CDS 40.0%
CATGGTTATAGGTTCTCTGA+AGG + chr1_1:21191858-21191877 Msa0013740:CDS 40.0%
! GTTATAGGTTCTCTGAAGGT+TGG + chr1_1:21191862-21191881 Msa0013740:CDS 40.0%
CAATAGAACAAGCAGCTAAG+GGG - chr1_1:21191992-21192011 None:intergenic 40.0%
TTACGAGTTCTTCTCCAGTT+TGG + chr1_1:21192211-21192230 Msa0013740:intron 40.0%
GGATGTTGTGATCGTGAAAT+TGG - chr1_1:21192260-21192279 None:intergenic 40.0%
GAATCACACGATTAGGAACA+AGG - chr1_1:21192281-21192300 None:intergenic 40.0%
TTCCTAATCGTGTGATTCAC+CGG + chr1_1:21192283-21192302 Msa0013740:intron 40.0%
! ATTTTACGAACCCAACAGTG+TGG - chr1_1:21192316-21192335 None:intergenic 40.0%
CTGTTGGGTTCGTAAAATCA+CGG + chr1_1:21192318-21192337 Msa0013740:intron 40.0%
!! CGTAAAATCACGGTTGGTAA+TGG + chr1_1:21192328-21192347 Msa0013740:intron 40.0%
ACATGCTACCGTTTCTCAAT+TGG + chr1_1:21192394-21192413 Msa0013740:intron 40.0%
CATGCTACCGTTTCTCAATT+GGG + chr1_1:21192395-21192414 Msa0013740:intron 40.0%
GTCACAACCCAATTGAGAAA+CGG - chr1_1:21192405-21192424 None:intergenic 40.0%
TCATGGCTTGAATATGGACA+CGG + chr1_1:21192521-21192540 Msa0013740:intron 40.0%
ATATGGACACGGAAATTCCT+CGG + chr1_1:21192532-21192551 Msa0013740:intron 40.0%
TAAGCAAGCAATCGTGTTTG+AGG - chr1_1:21192580-21192599 None:intergenic 40.0%
GGCCTGAATGTCAAACAAAT+TGG - chr1_1:21192611-21192630 None:intergenic 40.0%
ATGTTATCCCCTTTGACACA+CGG - chr1_1:21192649-21192668 None:intergenic 40.0%
GCGCTGAGATTAAACTTCAT+TGG + chr1_1:21192820-21192839 Msa0013740:intron 40.0%
CTAACTGAGTGAGACATCAA+AGG - chr1_1:21192881-21192900 None:intergenic 40.0%
! TAGTTGCAAAACAATGGGCT+AGG - chr1_1:21192940-21192959 None:intergenic 40.0%
! GGAGAGTCACTTTAATCCAA+AGG + chr1_1:21193063-21193082 Msa0013740:intron 40.0%
AAGCGGTGAACACATATACT+TGG + chr1_1:21193673-21193692 Msa0013740:intron 40.0%
! AATATTGTGTTAGGGGGTGT+TGG - chr1_1:21193885-21193904 None:intergenic 40.0%
GTGGTTTCATGTCATTGGAT+GGG - chr1_1:21193910-21193929 None:intergenic 40.0%
TGTGGTTTCATGTCATTGGA+TGG - chr1_1:21193911-21193930 None:intergenic 40.0%
GTGTATGTCTAATTGGGACT+TGG - chr1_1:21193956-21193975 None:intergenic 40.0%
! GTATTGGTATACTGGGAAGT+GGG - chr1_1:21194031-21194050 None:intergenic 40.0%
! TGTATTGGTATACTGGGAAG+TGG - chr1_1:21194032-21194051 None:intergenic 40.0%
GGACCAATGAAAATACACAC+CGG + chr1_1:21194092-21194111 Msa0013740:intron 40.0%
AGAGGACACATCTATGAAAG+TGG + chr1_1:21195276-21195295 Msa0013740:CDS 40.0%
! GAAGAGAATGCACTTTTGGA+AGG - chr1_1:21195657-21195676 None:intergenic 40.0%
! CCTTGAAGAGAATGCACTTT+TGG - chr1_1:21195661-21195680 None:intergenic 40.0%
! CCAAAAGTGCATTCTCTTCA+AGG + chr1_1:21195658-21195677 Msa0013740:CDS 40.0%
AGTGTCTTTCCTCTTCAGAA+TGG - chr1_1:21195999-21196018 None:intergenic 40.0%
! ATTCTGAAGAGGAAAGACAC+TGG + chr1_1:21195998-21196017 Msa0013740:CDS 40.0%
!! AAGAGCATGCACTTTTGGAA+GGG - chr1_1:21196038-21196057 None:intergenic 40.0%
TCAACTGAACTAAGCTCACA+AGG - chr1_1:21196788-21196807 None:intergenic 40.0%
!!! ATAGTTTTTTGGTGGTGGCA+GGG - chr1_1:21196852-21196871 None:intergenic 40.0%
!!! AATAGTTTTTTGGTGGTGGC+AGG - chr1_1:21196853-21196872 None:intergenic 40.0%
!! CGGAGGGAGTATAATTTTAG+AGG - chr1_1:21197527-21197546 None:intergenic 40.0%
CTCTTATAAATAGGACCGGA+GGG - chr1_1:21197640-21197659 None:intergenic 40.0%
TCTCTTATAAATAGGACCGG+AGG - chr1_1:21197639-21197658 None:intergenic 40.0%
CTCTTATAAATAGGACCGGA+AGG + chr1_1:21197640-21197659 Msa0013740:intron 40.0%
AGACCATCAAACCAACCAAA+TGG - chr1_1:21198037-21198056 None:intergenic 40.0%
TTTGGTGAATTCCAAACACC+CGG + chr1_1:21198201-21198220 Msa0013740:intron 40.0%
GACTCAAAAATGATGCATCC+TGG + chr1_1:21198299-21198318 Msa0013740:intron 40.0%
CATCCTGGAACTGTCAAAAT+CGG + chr1_1:21198314-21198333 Msa0013740:intron 40.0%
!! GCCGATTTTTACAGTATCAC+AGG - chr1_1:21198389-21198408 None:intergenic 40.0%
AAAACCAAACGGAACAGAAC+CGG - chr1_1:21198481-21198500 None:intergenic 40.0%
!!! CTGTTCCGTTTGGTTTTTTG+AGG + chr1_1:21198484-21198503 Msa0013740:intron 40.0%
GCATCCCTCAAAAAACCAAA+CGG - chr1_1:21198492-21198511 None:intergenic 40.0%
ATTCTCTTGGCAACAACACT+AGG + chr1_1:21198606-21198625 Msa0013740:intron 40.0%
TTCTCTTGGCAACAACACTA+GGG + chr1_1:21198607-21198626 Msa0013740:intron 40.0%
TCTAATGATGACCTACTCTG+GGG - chr1_1:21198807-21198826 None:intergenic 40.0%
GTCTAATGATGACCTACTCT+GGG - chr1_1:21198808-21198827 None:intergenic 40.0%
CAGCAAGAGATAAAGGAAGA+AGG - chr1_1:21198863-21198882 None:intergenic 40.0%
TACCAAGCAATCAATCAAGC+GGG - chr1_1:21198913-21198932 None:intergenic 40.0%
CACAACGAATTCGCAACAAT+TGG + chr1_1:21198975-21198994 Msa0013740:intron 40.0%
!! CCTGGTTATTGATTTGACCT+TGG - chr1_1:21199015-21199034 None:intergenic 40.0%
CCAAGGTCAAATCAATAACC+AGG + chr1_1:21199012-21199031 Msa0013740:intron 40.0%
TTTACCGGTAGTAACGACTT+CGG + chr1_1:21199066-21199085 Msa0013740:intron 40.0%
GTTGTGGAAGGTAAAGATGA+GGG + chr1_1:21199089-21199108 Msa0013740:intron 40.0%
GACGGAGATGAATGATAAAG+CGG + chr1_1:21199191-21199210 Msa0013740:intron 40.0%
AGTGCTATCATTCTGTGTCT+TGG + chr1_1:21199216-21199235 Msa0013740:intron 40.0%
! CATTCTGTGTCTTGGTGATA+AGG + chr1_1:21199224-21199243 Msa0013740:intron 40.0%
!! AGGTGTTGAGAGAAGTATCA+AGG + chr1_1:21199244-21199263 Msa0013740:intron 40.0%
!! GGTGTTGAGAGAAGTATCAA+GGG + chr1_1:21199245-21199264 Msa0013740:intron 40.0%
ATTGTACATGACCAAGTCCT+TGG + chr1_1:21199305-21199324 Msa0013740:intron 40.0%
!! ACTCTACTTTTACCGAATGG+TGG + chr1_1:21199353-21199372 Msa0013740:intron 40.0%
!!! TAGGTTTTGACTCCACCATT+CGG - chr1_1:21199368-21199387 None:intergenic 40.0%
GGTGGAGTCAAAACCTATAA+TGG + chr1_1:21199371-21199390 Msa0013740:intron 40.0%
! ACCTATAATGGAGCAACTGA+CGG + chr1_1:21199383-21199402 Msa0013740:intron 40.0%
AGATGTAAACCTGGATGATG+AGG + chr1_1:21199440-21199459 Msa0013740:intron 40.0%
TAAAGCACACAGTAGGTGTA+AGG - chr1_1:21199472-21199491 None:intergenic 40.0%
ACTTAGGTAAAGCACACAGT+AGG - chr1_1:21199479-21199498 None:intergenic 40.0%
!! GAGTTGAAGGTTGATGATAG+TGG + chr1_1:21199603-21199622 Msa0013740:intron 40.0%
!! AAGGTTGATGATAGTGGAGA+AGG + chr1_1:21199609-21199628 Msa0013740:intron 40.0%
AGAAGGCTTGAATGTCTCAA+GGG + chr1_1:21199626-21199645 Msa0013740:intron 40.0%
GAAGTGAAAACAGAGGAAAG+GGG + chr1_1:21199652-21199671 Msa0013740:intron 40.0%
AGAATTCCAGGTCAAAGTCT+AGG + chr1_1:21199682-21199701 Msa0013740:intron 40.0%
AGGTCAAAGTCTAGGTCAAA+GGG + chr1_1:21199690-21199709 Msa0013740:intron 40.0%
CAACTATGGTCACTTCAAGA+AGG + chr1_1:21199752-21199771 Msa0013740:intron 40.0%
TCACTTCAAGAAGGATTGTC+CGG + chr1_1:21199761-21199780 Msa0013740:intron 40.0%
CTCTTCACTTGCAATCTGAA+CGG - chr1_1:21199817-21199836 None:intergenic 40.0%
AGCACTAACTGTGACAAGTT+GGG + chr1_1:21199857-21199876 Msa0013740:intron 40.0%
! ACAAGTTGGGAACCTGAAAA+GGG + chr1_1:21199870-21199889 Msa0013740:intron 40.0%
TTATCACATCTGTCCGAGAA+AGG + chr1_1:21199917-21199936 Msa0013740:intron 40.0%
!! GAAACTTTGGAGCTGAAAGA+AGG + chr1_1:21199948-21199967 Msa0013740:intron 40.0%
GGCTTGCAAAATTCAAGGTA+TGG + chr1_1:21199998-21200017 Msa0013740:intron 40.0%
! TGACCGTGATTTCCTTTTGA+AGG + chr1_1:21200046-21200065 Msa0013740:intron 40.0%
CACTGTTATAGGTCATGCAT+CGG + chr1_1:21200235-21200254 Msa0013740:intron 40.0%
CTCTGGACATAACTAAACTG+TGG + chr1_1:21200273-21200292 Msa0013740:intron 40.0%
! AAACTGTGGCATTTGAGGTT+AGG + chr1_1:21200287-21200306 Msa0013740:intron 40.0%
TTGGTTGAGCTAGCTAAACA+AGG + chr1_1:21200329-21200348 Msa0013740:intron 40.0%
! CTAGCTAAACAAGGTTTGCT+AGG + chr1_1:21200338-21200357 Msa0013740:intron 40.0%
CACATTAGGCAAACAACACA+AGG + chr1_1:21200400-21200419 Msa0013740:intron 40.0%
ACAACACAAGGTGAAGTTTG+GGG + chr1_1:21200412-21200431 Msa0013740:intron 40.0%
TGGGTGTGCATAAATCTAGT+AGG + chr1_1:21200435-21200454 Msa0013740:intron 40.0%
!! GCCTTTTGAGTATGTCCATT+CGG + chr1_1:21200457-21200476 Msa0013740:intron 40.0%
TCCGAATGGACATACTCAAA+AGG - chr1_1:21200461-21200480 None:intergenic 40.0%
AGTATGTCCATTCGGATCTT+TGG + chr1_1:21200465-21200484 Msa0013740:intron 40.0%
GTATGTCCATTCGGATCTTT+GGG + chr1_1:21200466-21200485 Msa0013740:intron 40.0%
TATGTCCATTCGGATCTTTG+GGG + chr1_1:21200467-21200486 Msa0013740:intron 40.0%
! AATGAGTTTTGCAGGAAACG+AGG + chr1_1:21200701-21200720 Msa0013740:intron 40.0%
! TATAAAGAGGCATAGAACCG+TGG + chr1_1:21200724-21200743 Msa0013740:intron 40.0%
ACTATCAGCTAGCAAGAGAT+AGG + chr1_1:21201293-21201312 Msa0013740:intron 40.0%
AGCTAGCAAGAGATAGGATA+AGG + chr1_1:21201299-21201318 Msa0013740:intron 40.0%
TCAGCATAACCGTATCTAAC+AGG - chr1_1:21201340-21201359 None:intergenic 40.0%
AGCTGAAGAATTGCAAGACT+CGG + chr1_1:21201384-21201403 Msa0013740:intron 40.0%
AATGCTTCCCTGAAGTTCTT+TGG - chr1_1:21201412-21201431 None:intergenic 40.0%
CATTGGAAAAGAACCAGACT+TGG + chr1_1:21201485-21201504 Msa0013740:intron 40.0%
ACCTAAGAATCAAAGGGTAG+TGG + chr1_1:21201522-21201541 Msa0013740:intron 40.0%
CCTAAGAATCAAAGGGTAGT+GGG + chr1_1:21201523-21201542 Msa0013740:intron 40.0%
! GAAGAAAGAAGGTATACCAG+GGG + chr1_1:21201564-21201583 Msa0013740:intron 40.0%
AAGCAAGACTTGTAGCAAAG+GGG + chr1_1:21201605-21201624 Msa0013740:intron 40.0%
! CAATGAAATCTTTTCACCGG+TGG + chr1_1:21201655-21201674 Msa0013740:intron 40.0%
CAACTCTCCATGTAGAAATG+CGG - chr1_1:21201759-21201778 None:intergenic 40.0%
TCATCTTCTACGAAACCTTC+TGG - chr1_1:21201806-21201825 None:intergenic 40.0%
TCACAAAACCAGCCTTTACT+AGG - chr1_1:21201910-21201929 None:intergenic 40.0%
GTTGTGTTTACATGATGAGG+AGG + chr1_1:21201945-21201964 Msa0013740:intron 40.0%
!! AGGATCTTGGTAATGCAAAG+AGG + chr1_1:21202083-21202102 Msa0013740:intron 40.0%
GGTAATGCAAAGAGGATACT+TGG + chr1_1:21202091-21202110 Msa0013740:intron 40.0%
TGCAAAGAGGATACTTGGTA+TGG + chr1_1:21202096-21202115 Msa0013740:intron 40.0%
ATCATAAGGGACCGAAACAA+AGG + chr1_1:21202121-21202140 Msa0013740:intron 40.0%
GAGTTGTTCTTATCTCAGCA+AGG + chr1_1:21202145-21202164 Msa0013740:intron 40.0%
TATCTCAGCAAGGTTACTTG+AGG + chr1_1:21202155-21202174 Msa0013740:intron 40.0%
!! ATGAGAGATTCTAAGGTCGT+TGG + chr1_1:21202199-21202218 Msa0013740:intron 40.0%
AACTTTGTGTGATGACCAAG+AGG - chr1_1:21202229-21202248 None:intergenic 40.0%
!! TGGAAGCATCATGTATGGTA+TGG + chr1_1:21202321-21202340 Msa0013740:intron 40.0%
! TGGTATGGTTTGTAGTAGAC+CGG + chr1_1:21202336-21202355 Msa0013740:intron 40.0%
! AAGTCGGTTTATGGCAAATC+CGG + chr1_1:21202384-21202403 Msa0013740:intron 40.0%
ATACAAAGTCACAACCAGGA+AGG + chr1_1:21202479-21202498 Msa0013740:intron 40.0%
TACAAAGTCACAACCAGGAA+GGG + chr1_1:21202480-21202499 Msa0013740:intron 40.0%
AGTACATAGCCCTTGTTGAA+GGG + chr1_1:21202653-21202672 Msa0013740:intron 40.0%
AAGGAAGCCATATGGTTGAA+AGG + chr1_1:21202679-21202698 Msa0013740:intron 40.0%
! TAGCCAAAGTGCCATTCATT+TGG + chr1_1:21202753-21202772 Msa0013740:intron 40.0%
TTGCCAAATGAATGGCACTT+TGG - chr1_1:21202759-21202778 None:intergenic 40.0%
GATTGAGACAAAGGAGATCA+TGG + chr1_1:21202843-21202862 Msa0013740:intron 40.0%
CCTTGATCTCGGTAATGATT+TGG - chr1_1:21202911-21202930 None:intergenic 40.0%
CCAAATCATTACCGAGATCA+AGG + chr1_1:21202908-21202927 Msa0013740:intron 40.0%
CAATGCTTGAACCTTGATCT+CGG - chr1_1:21202922-21202941 None:intergenic 40.0%
! ATCAAGGTTCAAGCATTGCT+TGG + chr1_1:21202924-21202943 Msa0013740:intron 40.0%
!!! TCATCACCATTTTGGAGTCA+AGG + chr1_1:21203019-21203038 Msa0013740:intron 40.0%
GACTCAAAAATGATGCATCC+TGG + chr1_1:21198299-21198318 Msa0013740:intron 40.0%
CATCCTGGAACTGTCAAAAT+CGG + chr1_1:21198314-21198333 Msa0013740:intron 40.0%
!! GCCGATTTTTACAGTATCAC+AGG - chr1_1:21198389-21198408 None:intergenic 40.0%
AAAACCAAACGGAACAGAAC+CGG - chr1_1:21198481-21198500 None:intergenic 40.0%
!!! CTGTTCCGTTTGGTTTTTTG+AGG + chr1_1:21198484-21198503 Msa0013740:intron 40.0%
GCATCCCTCAAAAAACCAAA+CGG - chr1_1:21198492-21198511 None:intergenic 40.0%
ATTCTCTTGGCAACAACACT+AGG + chr1_1:21198606-21198625 Msa0013740:intron 40.0%
TTCTCTTGGCAACAACACTA+GGG + chr1_1:21198607-21198626 Msa0013740:intron 40.0%
TCTAATGATGACCTACTCTG+GGG - chr1_1:21198807-21198826 None:intergenic 40.0%
GTCTAATGATGACCTACTCT+GGG - chr1_1:21198808-21198827 None:intergenic 40.0%
CAGCAAGAGATAAAGGAAGA+AGG - chr1_1:21198863-21198882 None:intergenic 40.0%
TACCAAGCAATCAATCAAGC+GGG - chr1_1:21198913-21198932 None:intergenic 40.0%
CCGAAGAGATTTATGGAAAG+AGG + chr1_1:21203800-21203819 Msa0013740:intron 40.0%
ATTGTGGAGTTGAAAATGGG+GGG + chr1_1:21203836-21203855 Msa0013740:intron 40.0%
AACTGACAACCACGAATACT+AGG - chr1_1:21203893-21203912 None:intergenic 40.0%
GTTGTCAGTTCAGTAAAGGT+TGG + chr1_1:21203903-21203922 Msa0013740:intron 40.0%
GAAATACTTGTCTCCTAGAG+CGG + chr1_1:21203960-21203979 Msa0013740:CDS 40.0%
! TTTTCTCATCAATCCGCTCT+AGG - chr1_1:21203976-21203995 None:intergenic 40.0%
GAGGATTCCCAAGAAGTTTG+TGG + chr1_1:21187700-21187719 Msa0013740:intron 45.0%
AAATACCCACCCAAGCTCAA+AGG + chr1_1:21188047-21188066 Msa0013740:CDS 45.0%
ACTACCCAGCCAAAATTCTC+AGG + chr1_1:21188112-21188131 Msa0013740:CDS 45.0%
!!! CTCACCTGAGAATTTTGGCT+GGG - chr1_1:21188119-21188138 None:intergenic 45.0%
!! ACTCACCTGAGAATTTTGGC+TGG - chr1_1:21188120-21188139 None:intergenic 45.0%
CACCTCACTTAAAGTGACGT+GGG - chr1_1:21188612-21188631 None:intergenic 45.0%
ACACCTCACTTAAAGTGACG+TGG - chr1_1:21188613-21188632 None:intergenic 45.0%
! CAGAGGAGGCATGATTAAGA+AGG + chr1_1:21189016-21189035 Msa0013740:CDS 45.0%
ACTTACCATCCTGCATCCAT+GGG - chr1_1:21189129-21189148 None:intergenic 45.0%
!!! GATCTGTTTTGACCACTGGT+TGG + chr1_1:21189391-21189410 Msa0013740:CDS 45.0%
GAGGTCCCTTCTTTATAACC+TGG - chr1_1:21189664-21189683 None:intergenic 45.0%
AAAGAAGGGACCTCTTCTTG+TGG + chr1_1:21189670-21189689 Msa0013740:CDS 45.0%
AACCAAAAGGGTGGTAGCAA+AGG + chr1_1:21189987-21190006 Msa0013740:intron 45.0%
! CAGTGGAGGCATGATTAAGA+AGG + chr1_1:21190446-21190465 Msa0013740:CDS 45.0%
!! CTTAAGAGTTGGTGAGGACA+TGG + chr1_1:21189329-21189348 Msa0013740:CDS 45.0%
GATCTCTTGTGACTACTGGT+TGG + chr1_1:21190814-21190833 Msa0013740:CDS 45.0%
!! CTCTCTGGAGTTGAAAATGG+GGG + chr1_1:21191794-21191813 Msa0013740:CDS 45.0%
!! TCTCTGGAGTTGAAAATGGG+GGG + chr1_1:21191795-21191814 Msa0013740:CDS 45.0%
CCAACAGTGTGGTTAAAGAC+CGG - chr1_1:21192305-21192324 None:intergenic 45.0%
CGGTCTTTAACCACACTGTT+GGG + chr1_1:21192303-21192322 Msa0013740:intron 45.0%
TGGGTTCGTAAAATCACGGT+TGG + chr1_1:21192322-21192341 Msa0013740:intron 45.0%
TCGTGCAGTTTCTGATTGTG+CGG + chr1_1:21192353-21192372 Msa0013740:intron 45.0%
GATTGTGCGGTGCTTTCTTT+CGG + chr1_1:21192366-21192385 Msa0013740:intron 45.0%
GTTTGAGGAGTTTGTGTTGG+CGG - chr1_1:21192565-21192584 None:intergenic 45.0%
CGTGTTTGAGGAGTTTGTGT+TGG - chr1_1:21192568-21192587 None:intergenic 45.0%
ACACGGTGTAGGAAAATGTG+AGG - chr1_1:21192632-21192651 None:intergenic 45.0%
TTTCCTACACCGTGTGTCAA+AGG + chr1_1:21192637-21192656 Msa0013740:intron 45.0%
TTCCTACACCGTGTGTCAAA+GGG + chr1_1:21192638-21192657 Msa0013740:intron 45.0%
GCATCTTACAAAGGAATGCG+AGG + chr1_1:21192972-21192991 Msa0013740:intron 45.0%
! GTTGACATTGGCTACACCTT+TGG - chr1_1:21193082-21193101 None:intergenic 45.0%
AAACTCTCACTCACCATCAG+TGG + chr1_1:21193524-21193543 Msa0013740:intron 45.0%
! TGGCCGGTGTGTATTTTCAT+TGG - chr1_1:21194098-21194117 None:intergenic 45.0%
ATGACACAAACTTACGCCCA+TGG + chr1_1:21195096-21195115 Msa0013740:CDS 45.0%
TTACGCCCATGGTCATATCT+TGG + chr1_1:21195107-21195126 Msa0013740:intron 45.0%
GGGATTGCAAGCTTAAGAGT+TGG + chr1_1:21195253-21195272 Msa0013740:intron 45.0%
TGCAAGCTTAAGAGTTGGAG+AGG + chr1_1:21195258-21195277 Msa0013740:CDS 45.0%
CCTTGCAACTTCTTAGGGTT+TGG - chr1_1:21195463-21195482 None:intergenic 45.0%
CCAAACCCTAAGAAGTTGCA+AGG + chr1_1:21195460-21195479 Msa0013740:CDS 45.0%
AAGACACCGGAGAAACTTGT+AGG + chr1_1:21195629-21195648 Msa0013740:CDS 45.0%
AAGGGTCCTACAAGTTTCTC+CGG - chr1_1:21195638-21195657 None:intergenic 45.0%
! GTGATCATGCCATTCTGAAG+AGG + chr1_1:21195987-21196006 Msa0013740:CDS 45.0%
AAGACACTGGCGAAACTTGT+AGG + chr1_1:21196011-21196030 Msa0013740:CDS 45.0%
!! GAAGAGCATGCACTTTTGGA+AGG - chr1_1:21196039-21196058 None:intergenic 45.0%
! TCCAAAAGTGCATGCTCTTC+AGG + chr1_1:21196039-21196058 Msa0013740:CDS 45.0%
! CCAAAAGTGCATGCTCTTCA+GGG + chr1_1:21196040-21196059 Msa0013740:CDS 45.0%
! ACGGCTCTGACAAATTTCTC+CGG - chr1_1:21196211-21196230 None:intergenic 45.0%
TGAATTCCAAACACCCGGTA+GGG + chr1_1:21198206-21198225 Msa0013740:intron 45.0%
AATTAACCCTACCGGGTGTT+TGG - chr1_1:21198215-21198234 None:intergenic 45.0%
ACTTCTGCAGCGCAACAAAT+CGG - chr1_1:21198435-21198454 None:intergenic 45.0%
TTGGCAACAACACTAGGGTT+GGG + chr1_1:21198612-21198631 Msa0013740:intron 45.0%
AGGATTGAGTCTCTTGGTCA+CGG + chr1_1:21198668-21198687 Msa0013740:intron 45.0%
CTAATGATGACCTACTCTGG+GGG - chr1_1:21198806-21198825 None:intergenic 45.0%
GGTCTAATGATGACCTACTC+TGG - chr1_1:21198809-21198828 None:intergenic 45.0%
AGGTCATCATTAGACCGAAC+TGG + chr1_1:21198813-21198832 Msa0013740:intron 45.0%
GGTCATCATTAGACCGAACT+GGG + chr1_1:21198814-21198833 Msa0013740:intron 45.0%
AGGTATCATGGGTTCGAAGT+GGG + chr1_1:21199032-21199051 Msa0013740:intron 45.0%
TTACCGGTAGTAACGACTTC+GGG + chr1_1:21199067-21199086 Msa0013740:intron 45.0%
GGTTGTGGAAGGTAAAGATG+AGG + chr1_1:21199088-21199107 Msa0013740:intron 45.0%
TCTGACACCTGTTGAGAAGA+CGG + chr1_1:21199173-21199192 Msa0013740:intron 45.0%
TTCATCTCCGTCTTCTCAAC+AGG - chr1_1:21199183-21199202 None:intergenic 45.0%
AGACTACTGCTGTGTCTATG+TGG + chr1_1:21199268-21199287 Msa0013740:intron 45.0%
TTGTCTATGTGCCAAGGACT+TGG - chr1_1:21199319-21199338 None:intergenic 45.0%
CAGACATTGTCTATGTGCCA+AGG - chr1_1:21199325-21199344 None:intergenic 45.0%
TCCGTCAGTTGCTCCATTAT+AGG - chr1_1:21199387-21199406 None:intergenic 45.0%
GGCGAACATAGATGTAAACC+TGG + chr1_1:21199431-21199450 Msa0013740:intron 45.0%
! AGGCTTTATCCTCATCATCC+AGG - chr1_1:21199452-21199471 None:intergenic 45.0%
!! CAAAGAGGGCACTATCACTT+TGG + chr1_1:21199533-21199552 Msa0013740:intron 45.0%
GAGAAGGCTTGAATGTCTCA+AGG + chr1_1:21199625-21199644 Msa0013740:intron 45.0%
GAAGGCTTGAATGTCTCAAG+GGG + chr1_1:21199627-21199646 Msa0013740:intron 45.0%
AGGGGAAGAAGTGAAAACAG+AGG + chr1_1:21199645-21199664 Msa0013740:intron 45.0%
GAAAACAGAGGAAAGGGGAA+AGG + chr1_1:21199657-21199676 Msa0013740:intron 45.0%
CTTTGACCTAGACTTTGACC+TGG - chr1_1:21199691-21199710 None:intergenic 45.0%
CAGGTCAAAGTCTAGGTCAA+AGG + chr1_1:21199689-21199708 Msa0013740:intron 45.0%
TCAAAGTCTAGGTCAAAGGG+TGG + chr1_1:21199693-21199712 Msa0013740:intron 45.0%
AAGGATTGTCCGGAGAGAAA+GGG + chr1_1:21199771-21199790 Msa0013740:intron 45.0%
CGTTCAGATTGCAAGTGAAG+AGG + chr1_1:21199815-21199834 Msa0013740:intron 45.0%
CAGATTGCAAGTGAAGAGGA+AGG + chr1_1:21199819-21199838 Msa0013740:intron 45.0%
GAGCACTAACTGTGACAAGT+TGG + chr1_1:21199856-21199875 Msa0013740:intron 45.0%
! GACAAGTTGGGAACCTGAAA+AGG + chr1_1:21199869-21199888 Msa0013740:intron 45.0%
!! ACTTTGGAGCTGAAAGAAGG+TGG + chr1_1:21199951-21199970 Msa0013740:intron 45.0%
CGATGCATGACCTATAACAG+TGG - chr1_1:21200237-21200256 None:intergenic 45.0%
GTTAGGTCATGTCAGTGAGA+GGG + chr1_1:21200304-21200323 Msa0013740:intron 45.0%
TTAGGTCATGTCAGTGAGAG+GGG + chr1_1:21200305-21200324 Msa0013740:intron 45.0%
TCAGTTAAAACTCATGGGGG+AGG + chr1_1:21200497-21200516 Msa0013740:intron 45.0%
!! ACTGCTCTGAAACAAACTCC+AGG - chr1_1:21200679-21200698 None:intergenic 45.0%
GCAGGAAACGAGGTATAAAG+AGG + chr1_1:21200711-21200730 Msa0013740:intron 45.0%
GCATACACACCTCAACAGAA+TGG + chr1_1:21200746-21200765 Msa0013740:intron 45.0%
TCAGCAAGACCATTCTGTTG+AGG - chr1_1:21200758-21200777 None:intergenic 45.0%
CGTGTGAGGTGTATGTTGTT+GGG + chr1_1:21200803-21200822 Msa0013740:intron 45.0%
TGGACTGTCCAAGAGTTTCT+GGG + chr1_1:21200829-21200848 Msa0013740:intron 45.0%
!!! ACACCTATGGAGTTTTGGAG+TGG + chr1_1:21200917-21200936 Msa0013740:intron 45.0%
!!! CACCTATGGAGTTTTGGAGT+GGG + chr1_1:21200918-21200937 Msa0013740:intron 45.0%
AGCATTTGCTCATGTGAGAC+AGG + chr1_1:21200982-21201001 Msa0013740:intron 45.0%
! GGTTATCCTGAAGGTGTGAA+AGG + chr1_1:21201043-21201062 Msa0013740:intron 45.0%
CTGTAACCTTTCACACCTTC+AGG - chr1_1:21201052-21201071 None:intergenic 45.0%
GTGTGAAAGGTTACAGACTG+TGG + chr1_1:21201056-21201075 Msa0013740:intron 45.0%
AGGTTACAGACTGTGGAAGA+TGG + chr1_1:21201063-21201082 Msa0013740:intron 45.0%
! TACTTTTGATGAGACCCGCA+TGG + chr1_1:21201123-21201142 Msa0013740:intron 45.0%
! ACTTTTGATGAGACCCGCAT+GGG + chr1_1:21201124-21201143 Msa0013740:intron 45.0%
CCTGGATACAAGCTCAGAAA+CGG + chr1_1:21201162-21201181 Msa0013740:intron 45.0%
CTGGATACAAGCTCAGAAAC+GGG + chr1_1:21201163-21201182 Msa0013740:intron 45.0%
TGGATACAAGCTCAGAAACG+GGG + chr1_1:21201164-21201183 Msa0013740:intron 45.0%
CTACCACTGATGAAAGGGAA+GGG + chr1_1:21201215-21201234 Msa0013740:intron 45.0%
TACCACTGATGAAAGGGAAG+GGG + chr1_1:21201216-21201235 Msa0013740:intron 45.0%
TCTCTTGCTAGCTGATAGTC+AGG - chr1_1:21201292-21201311 None:intergenic 45.0%
GCATAACCGTATCTAACAGG+TGG - chr1_1:21201337-21201356 None:intergenic 45.0%
ACTCGGAACCAAAGAACTTC+AGG + chr1_1:21201401-21201420 Msa0013740:intron 45.0%
CTCGGAACCAAAGAACTTCA+GGG + chr1_1:21201402-21201421 Msa0013740:intron 45.0%
!! TGAAAGAAAGGACTGGCTGA+AGG + chr1_1:21201441-21201460 Msa0013740:intron 45.0%
CCCACTACCCTTTGATTCTT+AGG - chr1_1:21201526-21201545 None:intergenic 45.0%
! GTAGCAAAGGGGTTTTACTC+AGG + chr1_1:21201616-21201635 Msa0013740:intron 45.0%
GTGAAGACCGCATTTCTACA+TGG + chr1_1:21201749-21201768 Msa0013740:intron 45.0%
CGCATTTCTACATGGAGAGT+TGG + chr1_1:21201757-21201776 Msa0013740:intron 45.0%
! ATGGGTTGAAGCAAAGTCCA+AGG + chr1_1:21201858-21201877 Msa0013740:intron 45.0%
GATGAGTTCCTAGTAAAGGC+TGG + chr1_1:21201899-21201918 Msa0013740:intron 45.0%
GCAAGAGATTCAGAAGCTCA+AGG + chr1_1:21202033-21202052 Msa0013740:intron 45.0%
GCAAGGTTACTTGAGGAAAG+TGG + chr1_1:21202162-21202181 Msa0013740:intron 45.0%
AGGTTACTTGAGGAAAGTGG+TGG + chr1_1:21202165-21202184 Msa0013740:intron 45.0%
! AGTCGGTTTATGGCAAATCC+GGG + chr1_1:21202385-21202404 Msa0013740:intron 45.0%
TTGAATGGGACTTTGACAGG+TGG + chr1_1:21202448-21202467 Msa0013740:intron 45.0%
TTTGGAGGGATATGTGGATG+CGG + chr1_1:21202507-21202526 Msa0013740:intron 45.0%
TGTTCGGTACAGCAGTAACT+TGG + chr1_1:21202584-21202603 Msa0013740:intron 45.0%
GAGTACATAGCCCTTGTTGA+AGG + chr1_1:21202652-21202671 Msa0013740:intron 45.0%
GTACATAGCCCTTGTTGAAG+GGG + chr1_1:21202654-21202673 Msa0013740:intron 45.0%
TTCCTTGACCCCTTCAACAA+GGG - chr1_1:21202665-21202684 None:intergenic 45.0%
TGAGACAAAGGAGATCATGG+TGG + chr1_1:21202846-21202865 Msa0013740:intron 45.0%
!! GATTTGGTGAACATGTCTGC+TGG - chr1_1:21202895-21202914 None:intergenic 45.0%
!!! TCACCATTTTGGAGTCAAGG+TGG + chr1_1:21203022-21203041 Msa0013740:intron 45.0%
TCTCCACCTTGACTCCAAAA+TGG - chr1_1:21203028-21203047 None:intergenic 45.0%
GAGTCAAGGTGGAGAATTGT+TGG + chr1_1:21203033-21203052 Msa0013740:intron 45.0%
ACTTCTGCAGCGCAACAAAT+CGG - chr1_1:21198435-21198454 None:intergenic 45.0%
TTGGCAACAACACTAGGGTT+GGG + chr1_1:21198612-21198631 Msa0013740:intron 45.0%
AGGATTGAGTCTCTTGGTCA+CGG + chr1_1:21198668-21198687 Msa0013740:intron 45.0%
CTAATGATGACCTACTCTGG+GGG - chr1_1:21198806-21198825 None:intergenic 45.0%
GGTCTAATGATGACCTACTC+TGG - chr1_1:21198809-21198828 None:intergenic 45.0%
AGGTCATCATTAGACCGAAC+TGG + chr1_1:21198813-21198832 Msa0013740:intron 45.0%
GGTCATCATTAGACCGAACT+GGG + chr1_1:21198814-21198833 Msa0013740:intron 45.0%
GCATGCACCGAAGAGATTTA+TGG + chr1_1:21203793-21203812 Msa0013740:intron 45.0%
CGTGGTTGTCAGTTCAGTAA+AGG + chr1_1:21203899-21203918 Msa0013740:intron 45.0%
!!! GTTTATTTTTTTAAAAAAAA+AGG - chr1_1:21189970-21189989 None:intergenic 5.0%
!!! TATCATTTTATATTTATTTT+GGG - chr1_1:21190024-21190043 None:intergenic 5.0%
!!! TATGATTTAAATTTTTTTTT+AGG + chr1_1:21190107-21190126 Msa0013740:intron 5.0%
!!! ATGATTTAAATTTTTTTTTA+GGG + chr1_1:21190108-21190127 Msa0013740:intron 5.0%
!! ATATAAATTTATTTAAGAAA+AGG - chr1_1:21191522-21191541 None:intergenic 5.0%
!! AAATTTAAAAGAAATAATTA+AGG - chr1_1:21193410-21193429 None:intergenic 5.0%
!!! AATAATATATTAAAACATTT+TGG + chr1_1:21194127-21194146 Msa0013740:intron 5.0%
!!! CTTTTAATTTTTAAATATAT+TGG + chr1_1:21194603-21194622 Msa0013740:intron 5.0%
!!! ATTTATTTGTAAATTTTTAA+TGG + chr1_1:21196359-21196378 Msa0013740:intron 5.0%
CTTGTCCTTTGAGCTTGGGT+GGG - chr1_1:21188055-21188074 None:intergenic 50.0%
TCTTGTCCTTTGAGCTTGGG+TGG - chr1_1:21188056-21188075 None:intergenic 50.0%
! CACCCACGTCACTTTAAGTG+AGG + chr1_1:21188607-21188626 Msa0013740:intron 50.0%
TTGCCACAATCTTACGCCCA+TGG + chr1_1:21189110-21189129 Msa0013740:CDS 50.0%
CATCCATGGGCGTAAGATTG+TGG - chr1_1:21189116-21189135 None:intergenic 50.0%
AATCTTACGCCCATGGATGC+AGG + chr1_1:21189117-21189136 Msa0013740:CDS 50.0%
GACTTACCATCCTGCATCCA+TGG - chr1_1:21189130-21189149 None:intergenic 50.0%
GAGCTTGATTGCTCCCTTGA+TGG - chr1_1:21189513-21189532 None:intergenic 50.0%
! CACCTTTGCTACCACCCTTT+TGG - chr1_1:21189992-21190011 None:intergenic 50.0%
TACTTTGCAGGTAGGGACAG+TGG + chr1_1:21190429-21190448 Msa0013740:intron 50.0%
CGTCCATGGCAGCAATATGT+TGG + chr1_1:21190554-21190573 Msa0013740:CDS 50.0%
AAGCTTGGTTGCTCCCTTGA+TGG - chr1_1:21190936-21190955 None:intergenic 50.0%
GAGGTCCCTTCCTTATAACC+TGG - chr1_1:21191091-21191110 None:intergenic 50.0%
AAGGAAGGGACCTCTTCTTG+TGG + chr1_1:21191097-21191116 Msa0013740:intron 50.0%
! AGTTCTAGCTAGGGTAGGGT+AGG + chr1_1:21191380-21191399 Msa0013740:intron 50.0%
! GTTCTAGCTAGGGTAGGGTA+GGG + chr1_1:21191381-21191400 Msa0013740:intron 50.0%
GACCGGTGAATCACACGATT+AGG - chr1_1:21192288-21192307 None:intergenic 50.0%
CCGGTCTTTAACCACACTGT+TGG + chr1_1:21192302-21192321 Msa0013740:intron 50.0%
GAATGCAAACCGTAGCAGCT+CGG - chr1_1:21192503-21192522 None:intergenic 50.0%
GCTGCTACGGTTTGCATTCA+TGG + chr1_1:21192504-21192523 Msa0013740:intron 50.0%
TCCTACACCGTGTGTCAAAG+GGG + chr1_1:21192639-21192658 Msa0013740:intron 50.0%
TCACTCACCATCAGTGGCAT+GGG + chr1_1:21193530-21193549 Msa0013740:intron 50.0%
!! GGGGTGTTGGTGTGTATGTT+CGG - chr1_1:21193872-21193891 None:intergenic 50.0%
! CTTAGGGTTTGGTCCCTTGA+TGG - chr1_1:21195452-21195471 None:intergenic 50.0%
! TAGAGCGTGCACTTTGGGAA+GGG - chr1_1:21195847-21195866 None:intergenic 50.0%
CCTTGTAGAGCGTGCACTTT+GGG - chr1_1:21195852-21195871 None:intergenic 50.0%
ACCTTGTAGAGCGTGCACTT+TGG - chr1_1:21195853-21195872 None:intergenic 50.0%
!! CCCTGAAGAGCATGCACTTT+TGG - chr1_1:21196043-21196062 None:intergenic 50.0%
!! GGAGAGCATGCACTTTTGGA+CGG - chr1_1:21196230-21196249 None:intergenic 50.0%
! TCCAAAAGTGCATGCTCTCC+AGG + chr1_1:21196230-21196249 Msa0013740:intron 50.0%
! CCAAAAGTGCATGCTCTCCA+GGG + chr1_1:21196231-21196250 Msa0013740:intron 50.0%
GTGAATTCCAAACACCCGGT+AGG + chr1_1:21198205-21198224 Msa0013740:intron 50.0%
TGTAAAAATCGGCGCCCGAA+TGG + chr1_1:21198396-21198415 Msa0013740:intron 50.0%
GGCGCCCGAATGGTATAAAT+CGG + chr1_1:21198406-21198425 Msa0013740:intron 50.0%
GCGCCCGAATGGTATAAATC+GGG + chr1_1:21198407-21198426 Msa0013740:intron 50.0%
CGCCCGAATGGTATAAATCG+GGG + chr1_1:21198408-21198427 Msa0013740:intron 50.0%
GGCCCCGATTTATACCATTC+GGG - chr1_1:21198413-21198432 None:intergenic 50.0%
GGGCCCCGATTTATACCATT+CGG - chr1_1:21198414-21198433 None:intergenic 50.0%
CTTCTGCAGCGCAACAAATC+GGG - chr1_1:21198434-21198453 None:intergenic 50.0%
CTTGGCAACAACACTAGGGT+TGG + chr1_1:21198611-21198630 Msa0013740:intron 50.0%
GGATTGAGTCTCTTGGTCAC+GGG + chr1_1:21198669-21198688 Msa0013740:intron 50.0%
CACCCGCTTGATTGATTGCT+TGG + chr1_1:21198908-21198927 Msa0013740:intron 50.0%
! TTGATTTGACCTTGGCCCCA+CGG - chr1_1:21199007-21199026 None:intergenic 50.0%
CACTTCGAACCCATGATACC+TGG - chr1_1:21199033-21199052 None:intergenic 50.0%
CAGGTATCATGGGTTCGAAG+TGG + chr1_1:21199031-21199050 Msa0013740:intron 50.0%
CAACCCGAAGTCGTTACTAC+CGG - chr1_1:21199073-21199092 None:intergenic 50.0%
!! GTAGTAACGACTTCGGGTTG+TGG + chr1_1:21199073-21199092 Msa0013740:intron 50.0%
!! TAACGACTTCGGGTTGTGGA+AGG + chr1_1:21199077-21199096 Msa0013740:intron 50.0%
!! AGAGGGCACTATCACTTTGG+AGG + chr1_1:21199536-21199555 Msa0013740:intron 50.0%
AGGGGAAAGGCAAGAATTCC+AGG + chr1_1:21199670-21199689 Msa0013740:intron 50.0%
GAAGGATTGTCCGGAGAGAA+AGG + chr1_1:21199770-21199789 Msa0013740:intron 50.0%
CTTCCATTGCCCTTTCTCTC+CGG - chr1_1:21199783-21199802 None:intergenic 50.0%
GAGAGAAAGGGCAATGGAAG+TGG + chr1_1:21199783-21199802 Msa0013740:intron 50.0%
! GAGGAAGGTTATGAGAGTGC+TGG + chr1_1:21199834-21199853 Msa0013740:intron 50.0%
TTGGGAACCTGAAAAGGGCT+GGG + chr1_1:21199875-21199894 Msa0013740:intron 50.0%
GGTTGCTAGTGTAGACACTC+TGG + chr1_1:21200256-21200275 Msa0013740:intron 50.0%
GGTTAGGTCATGTCAGTGAG+AGG + chr1_1:21200303-21200322 Msa0013740:intron 50.0%
TCATGTCAGTGAGAGGGGTT+TGG + chr1_1:21200310-21200329 Msa0013740:intron 50.0%
ACACAAGGTGAAGTTTGGGG+TGG + chr1_1:21200415-21200434 Msa0013740:intron 50.0%
! CACAAGGTGAAGTTTGGGGT+GGG + chr1_1:21200416-21200435 Msa0013740:intron 50.0%
ATGGACCCCAAAGATCCGAA+TGG - chr1_1:21200475-21200494 None:intergenic 50.0%
GTTGAGAACTGACAATGGCC+TGG + chr1_1:21200658-21200677 Msa0013740:intron 50.0%
CTGTTGAGGTGTGTATGCCA+CGG - chr1_1:21200744-21200763 None:intergenic 50.0%
GCGTGTGAGGTGTATGTTGT+TGG + chr1_1:21200802-21200821 Msa0013740:intron 50.0%
AGGTGTATGTTGTTGGGAGC+TGG + chr1_1:21200809-21200828 Msa0013740:intron 50.0%
CTGGACTGTCCAAGAGTTTC+TGG + chr1_1:21200828-21200847 Msa0013740:intron 50.0%
GGACTGTCCAAGAGTTTCTG+GGG + chr1_1:21200830-21200849 Msa0013740:intron 50.0%
AGCTTCTCCCCAGAAACTCT+TGG - chr1_1:21200840-21200859 None:intergenic 50.0%
CTCCCACTCCAAAACTCCAT+AGG - chr1_1:21200923-21200942 None:intergenic 50.0%
AGACTGTGGAAGATGGAACC+TGG + chr1_1:21201070-21201089 Msa0013740:intron 50.0%
! CTTTTGATGAGACCCGCATG+GGG + chr1_1:21201125-21201144 Msa0013740:intron 50.0%
TTTGCACTTCATCCCCATGC+GGG - chr1_1:21201140-21201159 None:intergenic 50.0%
CTTTGCACTTCATCCCCATG+CGG - chr1_1:21201141-21201160 None:intergenic 50.0%
CCGTTTCTGAGCTTGTATCC+AGG - chr1_1:21201165-21201184 None:intergenic 50.0%
GGATACAAGCTCAGAAACGG+GGG + chr1_1:21201165-21201184 Msa0013740:intron 50.0%
TGGAGCCTACCACTGATGAA+AGG + chr1_1:21201209-21201228 Msa0013740:intron 50.0%
GGAGCCTACCACTGATGAAA+GGG + chr1_1:21201210-21201229 Msa0013740:intron 50.0%
CCTTCCCTTTCATCAGTGGT+AGG - chr1_1:21201217-21201236 None:intergenic 50.0%
CCTACCACTGATGAAAGGGA+AGG + chr1_1:21201214-21201233 Msa0013740:intron 50.0%
CCTTCACTCTCATCAGGTAC+TGG - chr1_1:21201253-21201272 None:intergenic 50.0%
CCAGTACCTGATGAGAGTGA+AGG + chr1_1:21201250-21201269 Msa0013740:intron 50.0%
! TCTTGGCCTTCACTCTCATC+AGG - chr1_1:21201259-21201278 None:intergenic 50.0%
CTGGCTGAAGGCAATGAATG+AGG + chr1_1:21201453-21201472 Msa0013740:intron 50.0%
!! AAAGGGTAGTGGGAAGCAAG+TGG + chr1_1:21201533-21201552 Msa0013740:intron 50.0%
!! AAGGGTAGTGGGAAGCAAGT+GGG + chr1_1:21201534-21201553 Msa0013740:intron 50.0%
! GCAAAGGGGTTTTACTCAGG+TGG + chr1_1:21201619-21201638 Msa0013740:intron 50.0%
! AGGGGTTTTACTCAGGTGGA+AGG + chr1_1:21201623-21201642 Msa0013740:intron 50.0%
! GGGGTTTTACTCAGGTGGAA+GGG + chr1_1:21201624-21201643 Msa0013740:intron 50.0%
TGAAGCAAAGTCCAAGGCAG+TGG + chr1_1:21201864-21201883 Msa0013740:intron 50.0%
! ACTTGAGGAAAGTGGTGGAG+CGG + chr1_1:21202170-21202189 Msa0013740:intron 50.0%
! AGGGTACTCCCTATGCAAGT+GGG + chr1_1:21202296-21202315 Msa0013740:intron 50.0%
CTTCCAACCCCACTTGCATA+GGG - chr1_1:21202307-21202326 None:intergenic 50.0%
!! GGGGTTGGAAGCATCATGTA+TGG + chr1_1:21202316-21202335 Msa0013740:intron 50.0%
!! TGCACTGGCAAGCTTTGAAG+TGG + chr1_1:21202413-21202432 Msa0013740:intron 50.0%
!! GCACTGGCAAGCTTTGAAGT+GGG + chr1_1:21202414-21202433 Msa0013740:intron 50.0%
ACAACCAGGAAGGGATGCTT+TGG + chr1_1:21202489-21202508 Msa0013740:intron 50.0%
!! GGATGCTTTGGAGGGATATG+TGG + chr1_1:21202501-21202520 Msa0013740:intron 50.0%
! TATGTGGATGCGGACTATGC+AGG + chr1_1:21202517-21202536 Msa0013740:intron 50.0%
CGGTACAGCAGTAACTTGGA+AGG + chr1_1:21202588-21202607 Msa0013740:intron 50.0%
CTTCCTTGACCCCTTCAACA+AGG - chr1_1:21202666-21202685 None:intergenic 50.0%
AAGGGGTCAAGGAAGCCATA+TGG + chr1_1:21202671-21202690 Msa0013740:intron 50.0%
! GGAGATCATGGTGGAGAAAG+TGG + chr1_1:21202855-21202874 Msa0013740:intron 50.0%
! CATGGTGGAGAAAGTGGCAT+CGG + chr1_1:21202861-21202880 Msa0013740:intron 50.0%
! GAGAGCAGCAAGGTGTTTGA+TGG + chr1_1:21202985-21203004 Msa0013740:intron 50.0%
TGTAAAAATCGGCGCCCGAA+TGG + chr1_1:21198396-21198415 Msa0013740:intron 50.0%
GGCGCCCGAATGGTATAAAT+CGG + chr1_1:21198406-21198425 Msa0013740:intron 50.0%
GCGCCCGAATGGTATAAATC+GGG + chr1_1:21198407-21198426 Msa0013740:intron 50.0%
CGCCCGAATGGTATAAATCG+GGG + chr1_1:21198408-21198427 Msa0013740:intron 50.0%
GGCCCCGATTTATACCATTC+GGG - chr1_1:21198413-21198432 None:intergenic 50.0%
GGGCCCCGATTTATACCATT+CGG - chr1_1:21198414-21198433 None:intergenic 50.0%
CTTCTGCAGCGCAACAAATC+GGG - chr1_1:21198434-21198453 None:intergenic 50.0%
CTTGGCAACAACACTAGGGT+TGG + chr1_1:21198611-21198630 Msa0013740:intron 50.0%
GGATTGAGTCTCTTGGTCAC+GGG + chr1_1:21198669-21198688 Msa0013740:intron 50.0%
CACCCGCTTGATTGATTGCT+TGG + chr1_1:21198908-21198927 Msa0013740:intron 50.0%
TGAAAATGGGGGGACAGTCA+TGG + chr1_1:21203846-21203865 Msa0013740:intron 50.0%
TTACGCCCATGGATGCAGGA+TGG + chr1_1:21189121-21189140 Msa0013740:CDS 55.0%
TTTGCAGGTAGGGACAGTGG+AGG + chr1_1:21190432-21190451 Msa0013740:intron 55.0%
! TGAGGAGTTTGTGTTGGCGG+TGG - chr1_1:21192562-21192581 None:intergenic 55.0%
TCCCCTTTGACACACGGTGT+AGG - chr1_1:21192643-21192662 None:intergenic 55.0%
CTCACTCACCATCAGTGGCA+TGG + chr1_1:21193529-21193548 Msa0013740:intron 55.0%
CACTCACCATCAGTGGCATG+GGG + chr1_1:21193531-21193550 Msa0013740:intron 55.0%
! GTAGAGCGTGCACTTTGGGA+AGG - chr1_1:21195848-21195867 None:intergenic 55.0%
CCCAAAGTGCACGCTCTACA+AGG + chr1_1:21195849-21195868 Msa0013740:CDS 55.0%
!! CCCTGGAGAGCATGCACTTT+TGG - chr1_1:21196234-21196253 None:intergenic 55.0%
!!! GCGCCGATTTTGACAGTTCC+AGG - chr1_1:21198320-21198339 None:intergenic 55.0%
AGTCTCTTGGTCACGGGAAG+AGG + chr1_1:21198675-21198694 Msa0013740:intron 55.0%
CTGGGACTGAGGGTAGAGTT+AGG + chr1_1:21198698-21198717 Msa0013740:intron 55.0%
TCAACAGGTGTCAGATGCGC+AGG - chr1_1:21199168-21199187 None:intergenic 55.0%
TGTCCGGAGAGAAAGGGCAA+TGG + chr1_1:21199777-21199796 Msa0013740:intron 55.0%
GTTGGGAACCTGAAAAGGGC+TGG + chr1_1:21199874-21199893 Msa0013740:intron 55.0%
ACCTGAAAAGGGCTGGGTCT+TGG + chr1_1:21199881-21199900 Msa0013740:intron 55.0%
! TCCAAGACCCAGCCCTTTTC+AGG - chr1_1:21199885-21199904 None:intergenic 55.0%
GAAGGTGGAGTTGTTCGCCT+TGG + chr1_1:21199966-21199985 Msa0013740:intron 55.0%
TGACCTTGTTGGAGCGTGTG+AGG + chr1_1:21200789-21200808 Msa0013740:intron 55.0%
ACACCTCACACGCTCCAACA+AGG - chr1_1:21200795-21200814 None:intergenic 55.0%
!!! GGAGTTTTGGAGTGGGAGAC+CGG + chr1_1:21200925-21200944 Msa0013740:intron 55.0%
GGGGATGAAGTGCAAAGACC+TGG + chr1_1:21201144-21201163 Msa0013740:intron 55.0%
CTCCCCTTCCCTTTCATCAG+TGG - chr1_1:21201221-21201240 None:intergenic 55.0%
CACTGATGAAAGGGAAGGGG+AGG + chr1_1:21201219-21201238 Msa0013740:intron 55.0%
GTCCAAGGCAGTGGTATCGT+CGG + chr1_1:21201873-21201892 Msa0013740:intron 55.0%
AACCGACGATACCACTGCCT+TGG - chr1_1:21201878-21201897 None:intergenic 55.0%
AAGGTCGTTGGCACTCCTCT+TGG + chr1_1:21202211-21202230 Msa0013740:intron 55.0%
!! GAGGGTACTCCCTATGCAAG+TGG + chr1_1:21202295-21202314 Msa0013740:intron 55.0%
GGGTACTCCCTATGCAAGTG+GGG + chr1_1:21202297-21202316 Msa0013740:intron 55.0%
ACTCCCTATGCAAGTGGGGT+TGG + chr1_1:21202301-21202320 Msa0013740:intron 55.0%
GCTTCCAACCCCACTTGCAT+AGG - chr1_1:21202308-21202327 None:intergenic 55.0%
CAAATCCGGGTCAAGTGCAC+TGG + chr1_1:21202398-21202417 Msa0013740:intron 55.0%
ACCAGGAAGGGATGCTTTGG+AGG + chr1_1:21202492-21202511 Msa0013740:intron 55.0%
! CCAGGAAGGGATGCTTTGGA+GGG + chr1_1:21202493-21202512 Msa0013740:intron 55.0%
AGCCCTTGTTGAAGGGGTCA+AGG + chr1_1:21202660-21202679 Msa0013740:intron 55.0%
GAAGGTTGGAGAGAGCAGCA+AGG + chr1_1:21202975-21202994 Msa0013740:intron 55.0%
!!! GCGCCGATTTTGACAGTTCC+AGG - chr1_1:21198320-21198339 None:intergenic 55.0%
AGTCTCTTGGTCACGGGAAG+AGG + chr1_1:21198675-21198694 Msa0013740:intron 55.0%
CTGGGACTGAGGGTAGAGTT+AGG + chr1_1:21198698-21198717 Msa0013740:intron 55.0%
TCCTTTGCAGGTGGGGACAG+AGG + chr1_1:21188999-21189018 Msa0013740:intron 60.0%
TCCTCTGTCCCCACCTGCAA+AGG - chr1_1:21189003-21189022 None:intergenic 60.0%
TTTGCAGGTGGGGACAGAGG+AGG + chr1_1:21189002-21189021 Msa0013740:intron 60.0%
GGCGTTTCACCGAGCTGCTA+CGG + chr1_1:21192491-21192510 Msa0013740:intron 60.0%
CTCTTGCCCCATGCCACTGA+TGG - chr1_1:21193540-21193559 None:intergenic 60.0%
GCGCCCGAACACTGTGCAAT+CGG + chr1_1:21198336-21198355 Msa0013740:intron 60.0%
CGCCCGAACACTGTGCAATC+GGG + chr1_1:21198337-21198356 Msa0013740:intron 60.0%
GCCCGAACACTGTGCAATCG+GGG + chr1_1:21198338-21198357 Msa0013740:intron 60.0%
GCCCCGATTGCACAGTGTTC+GGG - chr1_1:21198342-21198361 None:intergenic 60.0%
GGCCCCGATTGCACAGTGTT+CGG - chr1_1:21198343-21198362 None:intergenic 60.0%
! TGGGCCGGTTCTGTTCCGTT+TGG + chr1_1:21198474-21198493 Msa0013740:intron 60.0%
TCTTGGTCACGGGAAGAGGC+TGG + chr1_1:21198679-21198698 Msa0013740:intron 60.0%
CTTGGTCACGGGAAGAGGCT+GGG + chr1_1:21198680-21198699 Msa0013740:intron 60.0%
CAACAATTGGCGCCCACCGT+GGG + chr1_1:21198988-21199007 Msa0013740:intron 60.0%
AACAATTGGCGCCCACCGTG+GGG + chr1_1:21198989-21199008 Msa0013740:intron 60.0%
TTTGACCTTGGCCCCACGGT+GGG - chr1_1:21199003-21199022 None:intergenic 60.0%
ATTTGACCTTGGCCCCACGG+TGG - chr1_1:21199004-21199023 None:intergenic 60.0%
AAGGGCTGGGTCTTGGACTC+TGG + chr1_1:21199888-21199907 Msa0013740:intron 60.0%
AGGGCTGGGTCTTGGACTCT+GGG + chr1_1:21199889-21199908 Msa0013740:intron 60.0%
! TACCAGGGGTCGAAGCACCA+AGG + chr1_1:21201578-21201597 Msa0013740:intron 60.0%
!! TACCTTGGTGCTTCGACCCC+TGG - chr1_1:21201583-21201602 None:intergenic 60.0%
GCTTGCCAGTGCACTTGACC+CGG - chr1_1:21202406-21202425 None:intergenic 60.0%
! CCCTCCAAAGCATCCCTTCC+TGG - chr1_1:21202496-21202515 None:intergenic 60.0%
GCGCCCGAACACTGTGCAAT+CGG + chr1_1:21198336-21198355 Msa0013740:intron 60.0%
CGCCCGAACACTGTGCAATC+GGG + chr1_1:21198337-21198356 Msa0013740:intron 60.0%
GCCCGAACACTGTGCAATCG+GGG + chr1_1:21198338-21198357 Msa0013740:intron 60.0%
GCCCCGATTGCACAGTGTTC+GGG - chr1_1:21198342-21198361 None:intergenic 60.0%
GGCCCCGATTGCACAGTGTT+CGG - chr1_1:21198343-21198362 None:intergenic 60.0%
! TGGGCCGGTTCTGTTCCGTT+TGG + chr1_1:21198474-21198493 Msa0013740:intron 60.0%
TCTTGGTCACGGGAAGAGGC+TGG + chr1_1:21198679-21198698 Msa0013740:intron 60.0%
CTTGGTCACGGGAAGAGGCT+GGG + chr1_1:21198680-21198699 Msa0013740:intron 60.0%
ACGGGAAGAGGCTGGGACTG+AGG + chr1_1:21198687-21198706 Msa0013740:intron 65.0%
CGGGAAGAGGCTGGGACTGA+GGG + chr1_1:21198688-21198707 Msa0013740:intron 65.0%
GCTGCTCTCTCCCCCAGAGT+AGG + chr1_1:21198793-21198812 Msa0013740:intron 65.0%
GCAACAATTGGCGCCCACCG+TGG + chr1_1:21198987-21199006 Msa0013740:intron 65.0%
ACGGGAAGAGGCTGGGACTG+AGG + chr1_1:21198687-21198706 Msa0013740:intron 65.0%
CGGGAAGAGGCTGGGACTGA+GGG + chr1_1:21198688-21198707 Msa0013740:intron 65.0%
GCTGCTCTCTCCCCCAGAGT+AGG + chr1_1:21198793-21198812 Msa0013740:intron 65.0%
!! GTGTTGGCGGTGGAGTGCCG+AGG - chr1_1:21192552-21192571 None:intergenic 70.0%
! TGGCGCCCACCGTGGGGCCA+AGG + chr1_1:21198995-21199014 Msa0013740:intron 80.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 21187531 21204009 21187531 ID=Msa0013740;Name=Msa0013740
chr1_1 mRNA 21187531 21204009 21187531 ID=Msa0013740-mRNA-1;Parent=Msa0013740;Name=Msa0013740-mRNA-1;_AED=0.19;_eAED=0.19;_QI=0|0.21|0.1|1|0.68|0.65|20|0|917
chr1_1 exon 21187531 21187587 21187531 ID=Msa0013740-mRNA-1:exon:7555;Parent=Msa0013740-mRNA-1
chr1_1 exon 21187701 21187839 21187701 ID=Msa0013740-mRNA-1:exon:7556;Parent=Msa0013740-mRNA-1
chr1_1 exon 21187891 21188133 21187891 ID=Msa0013740-mRNA-1:exon:7557;Parent=Msa0013740-mRNA-1
chr1_1 exon 21189009 21189142 21189009 ID=Msa0013740-mRNA-1:exon:7558;Parent=Msa0013740-mRNA-1
chr1_1 exon 21189273 21189552 21189273 ID=Msa0013740-mRNA-1:exon:7559;Parent=Msa0013740-mRNA-1
chr1_1 exon 21189665 21189760 21189665 ID=Msa0013740-mRNA-1:exon:7560;Parent=Msa0013740-mRNA-1
chr1_1 exon 21190439 21190575 21190439 ID=Msa0013740-mRNA-1:exon:7561;Parent=Msa0013740-mRNA-1
chr1_1 exon 21190696 21190805 21190696 ID=Msa0013740-mRNA-1:exon:7562;Parent=Msa0013740-mRNA-1
chr1_1 exon 21190812 21190975 21190812 ID=Msa0013740-mRNA-1:exon:7563;Parent=Msa0013740-mRNA-1
chr1_1 exon 21191598 21191656 21191598 ID=Msa0013740-mRNA-1:exon:7564;Parent=Msa0013740-mRNA-1
chr1_1 exon 21191753 21191959 21191753 ID=Msa0013740-mRNA-1:exon:7565;Parent=Msa0013740-mRNA-1
chr1_1 exon 21194435 21194530 21194435 ID=Msa0013740-mRNA-1:exon:7566;Parent=Msa0013740-mRNA-1
chr1_1 exon 21194642 21194843 21194642 ID=Msa0013740-mRNA-1:exon:7567;Parent=Msa0013740-mRNA-1
chr1_1 exon 21194995 21195117 21194995 ID=Msa0013740-mRNA-1:exon:7568;Parent=Msa0013740-mRNA-1
chr1_1 exon 21195254 21195481 21195254 ID=Msa0013740-mRNA-1:exon:7569;Parent=Msa0013740-mRNA-1
chr1_1 exon 21195581 21195679 21195581 ID=Msa0013740-mRNA-1:exon:7570;Parent=Msa0013740-mRNA-1
chr1_1 exon 21195781 21195870 21195781 ID=Msa0013740-mRNA-1:exon:7571;Parent=Msa0013740-mRNA-1
chr1_1 exon 21195963 21196061 21195963 ID=Msa0013740-mRNA-1:exon:7572;Parent=Msa0013740-mRNA-1
chr1_1 exon 21196447 21196545 21196447 ID=Msa0013740-mRNA-1:exon:7573;Parent=Msa0013740-mRNA-1
chr1_1 exon 21203921 21204009 21203921 ID=Msa0013740-mRNA-1:exon:7574;Parent=Msa0013740-mRNA-1
chr1_1 CDS 21187531 21187587 21187531 ID=Msa0013740-mRNA-1:cds;Parent=Msa0013740-mRNA-1
chr1_1 CDS 21187701 21187839 21187701 ID=Msa0013740-mRNA-1:cds;Parent=Msa0013740-mRNA-1
chr1_1 CDS 21187891 21188133 21187891 ID=Msa0013740-mRNA-1:cds;Parent=Msa0013740-mRNA-1
chr1_1 CDS 21189009 21189142 21189009 ID=Msa0013740-mRNA-1:cds;Parent=Msa0013740-mRNA-1
chr1_1 CDS 21189273 21189552 21189273 ID=Msa0013740-mRNA-1:cds;Parent=Msa0013740-mRNA-1
chr1_1 CDS 21189665 21189760 21189665 ID=Msa0013740-mRNA-1:cds;Parent=Msa0013740-mRNA-1
chr1_1 CDS 21190439 21190575 21190439 ID=Msa0013740-mRNA-1:cds;Parent=Msa0013740-mRNA-1
chr1_1 CDS 21190696 21190805 21190696 ID=Msa0013740-mRNA-1:cds;Parent=Msa0013740-mRNA-1
chr1_1 CDS 21190812 21190975 21190812 ID=Msa0013740-mRNA-1:cds;Parent=Msa0013740-mRNA-1
chr1_1 CDS 21191598 21191656 21191598 ID=Msa0013740-mRNA-1:cds;Parent=Msa0013740-mRNA-1
chr1_1 CDS 21191753 21191959 21191753 ID=Msa0013740-mRNA-1:cds;Parent=Msa0013740-mRNA-1
chr1_1 CDS 21194435 21194530 21194435 ID=Msa0013740-mRNA-1:cds;Parent=Msa0013740-mRNA-1
chr1_1 CDS 21194642 21194843 21194642 ID=Msa0013740-mRNA-1:cds;Parent=Msa0013740-mRNA-1
chr1_1 CDS 21194995 21195117 21194995 ID=Msa0013740-mRNA-1:cds;Parent=Msa0013740-mRNA-1
chr1_1 CDS 21195254 21195481 21195254 ID=Msa0013740-mRNA-1:cds;Parent=Msa0013740-mRNA-1
chr1_1 CDS 21195581 21195679 21195581 ID=Msa0013740-mRNA-1:cds;Parent=Msa0013740-mRNA-1
chr1_1 CDS 21195781 21195870 21195781 ID=Msa0013740-mRNA-1:cds;Parent=Msa0013740-mRNA-1
chr1_1 CDS 21195963 21196061 21195963 ID=Msa0013740-mRNA-1:cds;Parent=Msa0013740-mRNA-1
chr1_1 CDS 21196447 21196545 21196447 ID=Msa0013740-mRNA-1:cds;Parent=Msa0013740-mRNA-1
chr1_1 CDS 21203921 21204009 21203921 ID=Msa0013740-mRNA-1:cds;Parent=Msa0013740-mRNA-1
Gene Sequence

>Msa0013740

ATGTCATTTCAAAATATCCCCGATTTTCATAGGATAATATTGCAAGATAAGAAGCTTAGGATTCCCAAGAAGTTTGTGGAGAACTTTTGGAAAGGAATATCAAACCCAATATTCCTTCAATTCCCAAATGGTGTTCAACAAGCAATATTTTGGGTGGAGAGTAATGGTGATATTTGGTTTCAAAAAAATTGGGAAAGTGGATCATGTTTCAAGGTTAAGATATTTGGTGCCAATACTTTAGAAATAAACTATTCCAATATCAAATCTGTTGAAGAAATTGTTGAAGCTACAGAAAAAGCTAAAGAAGGAGTTGAAGTGAGTGGTGATAGTGATAAGAGTTTAGATGAAAGTGAAATACCCACCCAAGCTCAAAGGACAAGAAAAAATGGCAAGAGAAAAAATAGTGTGGATTTGGATACTACCCAGCCAAAATTCTCAGGTGGGGACAGAGGAGGCATGATTAAGAAGGCTAAAAATTGTTCACCAGTTGAAGTTGTTAATGAGAGTGGCAATAATGAGAATCCCTTTTTTGATGTTACATTGCCACAATCTTACGCCCATGGATGCAGGATGGTGATACCAAGTGATTTTTCAAGAGCACACTTGAACAAATTTAAAGGGATTGCAAACTTAAGAGTTGGTGAGGACAAGACTATTGAAGTGAATGTGAACTTTGAAGATAATAATAGAAGATCTGTTTTGACCACTGGTTGGAAGTCATTTAACCAAAAATATAACTTACAAGTTGGTGATAAATGTAAATTTGTGATGACTCAAAGAGATCCACTTTCATTTCTTGTTATTATTACTCCATCAAGGGAGCAATCAAGCTCAGAGAAATTAAAATCGCAAGGTTATAAAGAAGGGACCTCTTCTTGTGGTGATAATCCAAAGAGAAAAGGATTTGAAGGAACTTCTAGGAGCTGCCCAACAAATCATCTTCTTGAAAGTAGGGACAGTGGAGGCATGATTAAGAAGGCTAAAAATTGCTCACCAGTTGAAGTTGTTAATGAGAGAGACAATAATGAGAATCCCTTTTTTTATGTTACATTGTCAAAATCTTACGTCCATGGCAGCAATATGTTGGTGATACCAAGTAATTTTTCAAGAGCACACTTGAACAAATTTAATGGGATTGCAAACTTAAGAGTTGGTGAGGACATGGTTATGAAAGTGAATGTGACGTTTGAAGATAAAAGATCTCTTGTGACTACTGGTTGGAAATCATTTAACCAAAAATATAACTTACAGATTGGTGATGAATGTAAATTTGTGATGACTCAAAGAGAACCACTTTCATTCACCGTTACTATTACTCCATCAAGGGAGCAACCAAGCTTAAAGAAATTAATATCGCAAGAAGGTGATAATGTGAAGAAACCTAAAACATTCAAGATTGATGTGTATTCAAAATACCCGAATGTTCCAAAGGAGTTTATGAAAAGAGGAAGTCATGAAAACTCTCTGGAGTTGAAAATGGGGGGACGATCATTGTTTGTAAAAGTGAATTATTACGATAGTATTCATGGTTATAGGTTCTCTGAAGGTTGGAGACAATTCATAAAAGAATGCAAAGTGGAGATTGGAGATACTCTTCTCTTTAAGTTGATTGATGAGAGCAAGTTTAGAATTCCCAAGAAATATGTGGAGAGATATTGGAAAGGAATAGCAAACCCAATATTCCTTAAATTCCCAAATGGTGTTCAACAACAAATATTTTGGGTTAAGATATTTGGTGTCAATGCTTTAGAAATAGATTATTCCAATATAAAATCTGTTGATGAAGTTGTTGAAGCTACAAAAGAAGCTAAAGAAATTGTTGATTTGACTAATGAGAGTGAAATACCAAAGGAAGCTCAAATGATAACAAATGGGAAGAGAAAAATGAGTATAGATATTGACACTCTTAAGCAAAAATTCCCAGGTAGGAACATTGAAGACACAATTAAGAAAGTTAAAAAATGCTCAAGAATTGAAGTTGTTAATGAGACAACCAATCATGAGAATCCCTTTTTTGAAGTTTTAATGACACAAACTTACGCCCATGGGATTGCAAGCTTAAGAGTTGGAGAGGACACATCTATGAAAGTGGATATTGTGTTTCACGATAAAAGATCTTCTAATTCTATGACTACTGGTTGGAAGTCATTTAACCAAAAATATAACTTACAAGTTGGTGATAAATGTAAATTTGTTATGACTCAAAGAGAACCACTTTTATTCACTATTACTATTACTAAAGCCATCAAGGGACCAAACCCTAAGAAGTTGCAAGGTTATAAAGAAGGGATCTCTTCTGGTGATCGTGATATTCTAAAGAGGAAAGACACCGGAGAAACTTGTAGGACCCTTCCAAAAGTGCATTCTCTTCAAGAAGAGATCTCTTTATGTGATCGTGATATTCTAAAGAGGAAAGACACTGGAGAAACTTATAGGACCCTTCCCAAAGTGCACGCTCTACAAGGTTATAAAGAAGGGATCTCTTCTGGTGATCATGCCATTCTGAAGAGGAAAGACACTGGCGAAACTTGTAGGACCCTTCCAAAAGTGCATGCTCTTCAGGGTTATAAAGAAGGGATCTCTTCTTGTGATAAGAATATTCTATGGAGGAAAGACAATGGAGAAACATCTAGGAGCTGTCCAAAAGAGCATGCTTCCCATGGTTGGATGAAATTTATGGAAGAATGCAAAGTGGAAATTGGAAATACTTGTCTCCTAGAGCGGATTGATGAGAAAAAGTATGTGTTTAAG
Protein sequence

>Msa0013740

MSFQNIPDFHRIILQDKKLRIPKKFVENFWKGISNPIFLQFPNGVQQAIFWVESNGDIWFQKNWESGSCFKVKIFGANTLEINYSNIKSVEEIVEATEKAKEGVEVSGDSDKSLDESEIPTQAQRTRKNGKRKNSVDLDTTQPKFSGGDRGGMIKKAKNCSPVEVVNESGNNENPFFDVTLPQSYAHGCRMVIPSDFSRAHLNKFKGIANLRVGEDKTIEVNVNFEDNNRRSVLTTGWKSFNQKYNLQVGDKCKFVMTQRDPLSFLVIITPSREQSSSEKLKSQGYKEGTSSCGDNPKRKGFEGTSRSCPTNHLLESRDSGGMIKKAKNCSPVEVVNERDNNENPFFYVTLSKSYVHGSNMLVIPSNFSRAHLNKFNGIANLRVGEDMVMKVNVTFEDKRSLVTTGWKSFNQKYNLQIGDECKFVMTQREPLSFTVTITPSREQPSLKKLISQEGDNVKKPKTFKIDVYSKYPNVPKEFMKRGSHENSLELKMGGRSLFVKVNYYDSIHGYRFSEGWRQFIKECKVEIGDTLLFKLIDESKFRIPKKYVERYWKGIANPIFLKFPNGVQQQIFWVKIFGVNALEIDYSNIKSVDEVVEATKEAKEIVDLTNESEIPKEAQMITNGKRKMSIDIDTLKQKFPGRNIEDTIKKVKKCSRIEVVNETTNHENPFFEVLMTQTYAHGIASLRVGEDTSMKVDIVFHDKRSSNSMTTGWKSFNQKYNLQVGDKCKFVMTQREPLLFTITITKAIKGPNPKKLQGYKEGISSGDRDILKRKDTGETCRTLPKVHSLQEEISLCDRDILKRKDTGETYRTLPKVHALQGYKEGISSGDHAILKRKDTGETCRTLPKVHALQGYKEGISSCDKNILWRKDNGETSRSCPKEHASHGWMKFMEECKVEIGNTCLLERIDEKKYVFK