Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|---|---|
| Msa0016900 | TF | C2C2-GATA |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0016900 | MtrunA17_Chr7g0235271 | 74.545 | 55 | 14 | 0 | 156 | 210 | 1 | 55 | 5.14e-23 | 91.3 |
| Msa0016900 | MtrunA17_Chr8g0362161 | 70.909 | 55 | 16 | 0 | 156 | 210 | 1 | 55 | 8.98e-22 | 88.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 55 sgRNAs with CRISPR-Local
Find 697 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACAAAAGCTTCAAAGTCTA+TGG | 0.184389 | 1_1:+28005527 | Msa0016900:CDS |
| AACAAAAGCTTCAAAGTCTA+TGG | 0.184389 | 1_1:+28015111 | Msa0016900:CDS |
| CGCTTGTGGACTACATTTCA+AGG | 0.405648 | 1_1:+28004932 | Msa0016900:CDS |
| CGCTTGTGGACTACATTTCA+AGG | 0.405648 | 1_1:+28014468 | Msa0016900:CDS |
| ATAACAACAAGGAAAACAAC+TGG | 0.420492 | 1_1:+28007001 | Msa0016900:CDS |
| ACTTGCTTCAATCCTCCAAT+TGG | 0.426597 | 1_1:-28007031 | None:intergenic |
| TGGAGTTTGGTTTGAAAGCT+CGG | 0.432563 | 1_1:-28014581 | None:intergenic |
| TGGAGATTGGTTTGAAAGCT+CGG | 0.447768 | 1_1:-28005045 | None:intergenic |
| CCACAAGCGTTACATAGTAT+TGG | 0.448818 | 1_1:-28004918 | None:intergenic |
| CCACAAGCGTTACATAGTAT+TGG | 0.448818 | 1_1:-28014454 | None:intergenic |
| GAAACTAAACTTTGGCGTAA+AGG | 0.456777 | 1_1:+28004882 | Msa0016900:CDS |
| GAAACTAAACTTTGGCGTAA+AGG | 0.456777 | 1_1:+28014418 | Msa0016900:intron |
| CATCCATGAAGTTGACTTGT+CGG | 0.461501 | 1_1:-28007069 | None:intergenic |
| ATCAGACCTTGACGTTGAAA+AGG | 0.465983 | 1_1:+28005007 | Msa0016900:CDS |
| ATCAGACCTTGACGTTGAAA+AGG | 0.465983 | 1_1:+28014543 | Msa0016900:CDS |
| ACAAGAATGCTTTCAGAAGA+AGG | 0.473328 | 1_1:+28007113 | Msa0016900:CDS |
| GGACTACATTTCAAGGCTAA+AGG | 0.474721 | 1_1:+28004939 | Msa0016900:CDS |
| GGACTACATTTCAAGGCTAA+AGG | 0.474721 | 1_1:+28014475 | Msa0016900:CDS |
| GATCCGACAAGTCAACTTCA+TGG | 0.476371 | 1_1:+28007066 | Msa0016900:CDS |
| TCTTCGGAAGATAGTTATCA+AGG | 0.478433 | 1_1:-28004965 | None:intergenic |
| TGTATACCAAGCAATGAGAT+AGG | 0.478624 | 1_1:+28005616 | Msa0016900:CDS |
| TGTATACCAAGCAATGAGAT+AGG | 0.479877 | 1_1:+28015200 | Msa0016900:CDS |
| CATAGTATTGGCTTCTCATA+CGG | 0.490978 | 1_1:-28004906 | None:intergenic |
| CATAGTATTGGCTTCTCATA+CGG | 0.490978 | 1_1:-28014442 | None:intergenic |
| ATCGATTGTGAAGAATCAAA+TGG | 0.491491 | 1_1:+28005495 | Msa0016900:CDS |
| ATCGATTGTGAAGAATCAAA+TGG | 0.491491 | 1_1:+28015079 | Msa0016900:CDS |
| GGAGATTGGTTTGAAAGCTC+GGG | 0.493147 | 1_1:-28005044 | None:intergenic |
| CCAAGCAATGAGATAGGCAT+TGG | 0.496933 | 1_1:+28005622 | Msa0016900:CDS |
| GGAGTTTGGTTTGAAAGCTC+GGG | 0.497343 | 1_1:-28014580 | None:intergenic |
| CTTTGGAAGATAGTTATCAA+TGG | 0.499183 | 1_1:-28014500 | None:intergenic |
| ATTTGATTCTTCACAATCGA+TGG | 0.523804 | 1_1:-28005493 | None:intergenic |
| ATTTGATTCTTCACAATCGA+TGG | 0.523804 | 1_1:-28015077 | None:intergenic |
| ACTTGTCGGATCTCCTCTTG+TGG | 0.524175 | 1_1:-28007055 | None:intergenic |
| CTACTCTCATGCATAAGTCT+TGG | 0.525421 | 1_1:+28007176 | Msa0016900:CDS |
| TCCAAGCCTATCTCATTGCT+TGG | 0.532760 | 1_1:-28015206 | None:intergenic |
| ACCAAGCAATGAGATAGGCT+TGG | 0.538476 | 1_1:+28015205 | Msa0016900:CDS |
| ACAAAAGCTTCAAAGTCTAT+GGG | 0.556384 | 1_1:+28005528 | Msa0016900:CDS |
| ACAAAAGCTTCAAAGTCTAT+GGG | 0.556384 | 1_1:+28015112 | Msa0016900:CDS |
| CAAGAATGCTTTCAGAAGAA+GGG | 0.561983 | 1_1:+28007114 | Msa0016900:CDS |
| CAGATGCGAGTTATTTCGAA+AGG | 0.562922 | 1_1:-28007205 | None:intergenic |
| CCAATGCCTATCTCATTGCT+TGG | 0.566560 | 1_1:-28005622 | None:intergenic |
| GAGCTTTCAAACCAATCTCC+AGG | 0.568278 | 1_1:+28005047 | Msa0016900:CDS |
| GACTTATGCATGAGAGTAGG+TGG | 0.580845 | 1_1:-28007172 | None:intergenic |
| ACAAGTCAACTTCATGGATG+AGG | 0.582776 | 1_1:+28007072 | Msa0016900:CDS |
| GAGCTTTCAAACCAAACTCC+AGG | 0.591419 | 1_1:+28014583 | Msa0016900:CDS |
| CCAATACTATGTAACGCTTG+TGG | 0.608782 | 1_1:+28004918 | Msa0016900:CDS |
| CCAATACTATGTAACGCTTG+TGG | 0.608782 | 1_1:+28014454 | Msa0016900:CDS |
| CAAGACTTATGCATGAGAGT+AGG | 0.615815 | 1_1:-28007175 | None:intergenic |
| TAACAACAAGGAAAACAACT+GGG | 0.620441 | 1_1:+28007002 | Msa0016900:CDS |
| ATTGAAGCAAGTTCCACAAG+AGG | 0.621027 | 1_1:+28007042 | Msa0016900:CDS |
| CTTCGGAAGATAGTTATCAA+GGG | 0.629882 | 1_1:-28004964 | None:intergenic |
| GATTGTGAAGAATCAAATGG+AGG | 0.680011 | 1_1:+28005498 | Msa0016900:CDS |
| GATTGTGAAGAATCAAATGG+AGG | 0.680011 | 1_1:+28015082 | Msa0016900:CDS |
| AACAACAAGGAAAACAACTG+GGG | 0.698459 | 1_1:+28007003 | Msa0016900:CDS |
| TGAGAACAAAGATAACAACA+AGG | 0.765280 | 1_1:+28006990 | Msa0016900:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATATATATATATATATAT+TGG | - | chr1_1:28007928-28007947 | None:intergenic | 0.0% |
| !! | AAAAAAAATTATTAAAAAAA+GGG | - | chr1_1:28014224-28014243 | None:intergenic | 0.0% |
| !! | ATTAAATATATACCAAAATA+TGG | - | chr1_1:28005918-28005937 | None:intergenic | 10.0% |
| !! | TAAAAGTTAATGAAATATTA+TGG | - | chr1_1:28005998-28006017 | None:intergenic | 10.0% |
| !! | AATTTGTATTAGATAATATT+TGG | - | chr1_1:28007616-28007635 | None:intergenic | 10.0% |
| !! | AAACTCAAATATAAATAAAA+CGG | - | chr1_1:28009854-28009873 | None:intergenic | 10.0% |
| !!! | TTTTTTATTGATTATAAGAA+CGG | - | chr1_1:28010469-28010488 | None:intergenic | 10.0% |
| !! | ATAATAAAAAAATTAATGCA+AGG | + | chr1_1:28011950-28011969 | Msa0016900:intron | 10.0% |
| !! | TAATAAAAAAATTAATGCAA+GGG | + | chr1_1:28011951-28011970 | Msa0016900:intron | 10.0% |
| !! | TATACTAAAATTTAACAATT+AGG | - | chr1_1:28013269-28013288 | None:intergenic | 10.0% |
| !!! | TTTTTCATAAAATTGTAATT+TGG | + | chr1_1:28013356-28013375 | Msa0016900:intron | 10.0% |
| !! | AAAAAATTATTAAAAAAAGG+GGG | - | chr1_1:28014222-28014241 | None:intergenic | 10.0% |
| !!! | AATTTTAATTTTTTGTAGAA+AGG | + | chr1_1:28015051-28015070 | Msa0016900:intron | 10.0% |
| !!! | TTTATATTTGTTGAAAAATG+GGG | - | chr1_1:28005107-28005126 | None:intergenic | 15.0% |
| !!! | CTTTATATTTGTTGAAAAAT+GGG | - | chr1_1:28005108-28005127 | None:intergenic | 15.0% |
| !!! | ACTTTTAATTTTTTGTAGAA+AGG | + | chr1_1:28005467-28005486 | Msa0016900:intron | 15.0% |
| !! | TAAAAAAAAAATACTCAACT+AGG | - | chr1_1:28006379-28006398 | None:intergenic | 15.0% |
| !! | AAACAAAAAGAAAAGAAAAA+TGG | - | chr1_1:28006494-28006513 | None:intergenic | 15.0% |
| !! | TAAAAAGAAAATAAATGAGT+GGG | - | chr1_1:28006535-28006554 | None:intergenic | 15.0% |
| !! | ATAAAAAGAAAATAAATGAG+TGG | - | chr1_1:28006536-28006555 | None:intergenic | 15.0% |
| !! | GGTTTATTAGTAATAATATT+AGG | + | chr1_1:28006760-28006779 | Msa0016900:intron | 15.0% |
| !! | AAATTTAAGTATAAAAGGAA+AGG | - | chr1_1:28007706-28007725 | None:intergenic | 15.0% |
| !!! | CTTAAATTTATTTTAGTCTT+AGG | + | chr1_1:28007717-28007736 | Msa0016900:intron | 15.0% |
| !!! | AATCATACATTTTTTTTAAG+AGG | - | chr1_1:28008403-28008422 | None:intergenic | 15.0% |
| !!! | TTTATTCTTTGTATTTTTTC+AGG | - | chr1_1:28008853-28008872 | None:intergenic | 15.0% |
| !!! | TTTGCTATTAAGTTTTATTT+AGG | + | chr1_1:28009624-28009643 | Msa0016900:intron | 15.0% |
| !!! | GAAGTAAAATAATTCTAAAA+AGG | - | chr1_1:28009896-28009915 | None:intergenic | 15.0% |
| !! | ATTAGGTTTACATAAAATTA+GGG | - | chr1_1:28010431-28010450 | None:intergenic | 15.0% |
| !! | AATTAGGTTTACATAAAATT+AGG | - | chr1_1:28010432-28010451 | None:intergenic | 15.0% |
| !! | CAATAAAAAATATTAATCGA+TGG | + | chr1_1:28010479-28010498 | Msa0016900:intron | 15.0% |
| !!! | AAAAGATGAAGTTTTAATAT+TGG | + | chr1_1:28010561-28010580 | Msa0016900:intron | 15.0% |
| !! | AACGATATAATAAAAGATAA+GGG | - | chr1_1:28011574-28011593 | None:intergenic | 15.0% |
| !! | TAACGATATAATAAAAGATA+AGG | - | chr1_1:28011575-28011594 | None:intergenic | 15.0% |
| !!! | CAATAAATCTATGTTTTTTT+GGG | - | chr1_1:28013010-28013029 | None:intergenic | 15.0% |
| !! | TAATTTGGATATTTAAAAAC+CGG | + | chr1_1:28013371-28013390 | Msa0016900:intron | 15.0% |
| !!! | TGAAACTGTTTTTTTTATAA+AGG | + | chr1_1:28013711-28013730 | Msa0016900:intron | 15.0% |
| !! | TTCGTTATTATTAGATAAAA+TGG | + | chr1_1:28013755-28013774 | Msa0016900:intron | 15.0% |
| !!! | TTAATAATTTTTTTTGAGTG+TGG | + | chr1_1:28014229-28014248 | Msa0016900:intron | 15.0% |
| !!! | TGTTTATTTTTAAGTTAACA+TGG | + | chr1_1:28014387-28014406 | Msa0016900:intron | 15.0% |
| !!! | TTATTGCATTTTTTATTACC+TGG | - | chr1_1:28005068-28005087 | None:intergenic | 20.0% |
| !!! | GCTTTATATTTGTTGAAAAA+TGG | - | chr1_1:28005109-28005128 | None:intergenic | 20.0% |
| !!! | ATTGTAAGAATTTTCTTAAG+AGG | + | chr1_1:28005162-28005181 | Msa0016900:intron | 20.0% |
| !! | AACACTACTATTTATATATG+AGG | + | chr1_1:28005213-28005232 | Msa0016900:intron | 20.0% |
| !!! | TTTTGAATGAATTGTATTGA+TGG | + | chr1_1:28005306-28005325 | Msa0016900:intron | 20.0% |
| !!! | TTTGAATGAATTGTATTGAT+GGG | + | chr1_1:28005307-28005326 | Msa0016900:intron | 20.0% |
| !! | TTATATGTATACATCATACA+CGG | - | chr1_1:28005447-28005466 | None:intergenic | 20.0% |
| !!! | ATTTTGAGAAATGATTTTGA+AGG | + | chr1_1:28005870-28005889 | Msa0016900:intron | 20.0% |
| !!! | TTCTTTTTGTTTTTCCATTT+AGG | + | chr1_1:28006502-28006521 | Msa0016900:intron | 20.0% |
| !! | AAAAAGAAAATAAATGAGTG+GGG | - | chr1_1:28006534-28006553 | None:intergenic | 20.0% |
| !! | ATTCTAAATGCAAAATGAAA+TGG | - | chr1_1:28006702-28006721 | None:intergenic | 20.0% |
| !!! | TTCATTTTGCATTTAGAATT+AGG | + | chr1_1:28006703-28006722 | Msa0016900:intron | 20.0% |
| !! | ACTATAGTAGTTAATTTAGA+TGG | + | chr1_1:28006788-28006807 | Msa0016900:intron | 20.0% |
| !! | GTCAATCAAATAAATTAAGT+CGG | + | chr1_1:28007742-28007761 | Msa0016900:intron | 20.0% |
| !! | AAGCAAAAATTGCATTTATA+TGG | - | chr1_1:28007968-28007987 | None:intergenic | 20.0% |
| !! | TAATAACAATATAGAAAAGG+TGG | - | chr1_1:28008076-28008095 | None:intergenic | 20.0% |
| !! | GGATAATAACAATATAGAAA+AGG | - | chr1_1:28008079-28008098 | None:intergenic | 20.0% |
| !!! | ATGTGTAGCTAATTATTTTT+AGG | + | chr1_1:28009532-28009551 | Msa0016900:intron | 20.0% |
| !! | TATCCAACAAAAATAAATAG+AGG | - | chr1_1:28009562-28009581 | None:intergenic | 20.0% |
| !!! | ATTGCAAGTTATTTAATTTC+AGG | + | chr1_1:28009917-28009936 | Msa0016900:intron | 20.0% |
| !! | ATTCTAGTGTTATATTTCTT+AGG | + | chr1_1:28010183-28010202 | Msa0016900:intron | 20.0% |
| !! | TTCTAGTGTTATATTTCTTA+GGG | + | chr1_1:28010184-28010203 | Msa0016900:intron | 20.0% |
| !! | AATAAAAATAAAAGAGCCTT+GGG | - | chr1_1:28010846-28010865 | None:intergenic | 20.0% |
| !! | TAATAAAAATAAAAGAGCCT+TGG | - | chr1_1:28010847-28010866 | None:intergenic | 20.0% |
| !! | ATATTCAACAATATAAACAG+AGG | + | chr1_1:28011454-28011473 | Msa0016900:intron | 20.0% |
| !!! | CTACTTATCATTTTATTACT+TGG | + | chr1_1:28011658-28011677 | Msa0016900:intron | 20.0% |
| !!! | TAGCTTTTAAAAAGTTGTAA+TGG | - | chr1_1:28011802-28011821 | None:intergenic | 20.0% |
| !! | AAGTAAAAATCTGTAACTTA+AGG | + | chr1_1:28011884-28011903 | Msa0016900:intron | 20.0% |
| !! | AGTAAAAATCTGTAACTTAA+GGG | + | chr1_1:28011885-28011904 | Msa0016900:intron | 20.0% |
| !! | TTATTATACTTTGTTCACTT+AGG | - | chr1_1:28011937-28011956 | None:intergenic | 20.0% |
| !! | AAATATTACCATAAAAAGGT+TGG | - | chr1_1:28012097-28012116 | None:intergenic | 20.0% |
| !! | TGGAAAATATTACCATAAAA+AGG | - | chr1_1:28012101-28012120 | None:intergenic | 20.0% |
| !!! | TCAACATTTAGATTTTAGAT+AGG | + | chr1_1:28012207-28012226 | Msa0016900:intron | 20.0% |
| !!! | CAACATTTAGATTTTAGATA+GGG | + | chr1_1:28012208-28012227 | Msa0016900:intron | 20.0% |
| !!! | AACATTTAGATTTTAGATAG+GGG | + | chr1_1:28012209-28012228 | Msa0016900:intron | 20.0% |
| !! | AAAATTACAATATTCCATGA+CGG | + | chr1_1:28012826-28012845 | Msa0016900:intron | 20.0% |
| !!! | TTGGGTTTTATTTTTTAGAT+CGG | - | chr1_1:28012992-28013011 | None:intergenic | 20.0% |
| !!! | CCAATAAATCTATGTTTTTT+TGG | - | chr1_1:28013011-28013030 | None:intergenic | 20.0% |
| !! | CCAAAAAAACATAGATTTAT+TGG | + | chr1_1:28013008-28013027 | Msa0016900:intron | 20.0% |
| !! | ATAGATTTATTGGATCTATT+TGG | + | chr1_1:28013018-28013037 | Msa0016900:intron | 20.0% |
| !! | AATATTATTATTTGTGCATG+TGG | - | chr1_1:28013111-28013130 | None:intergenic | 20.0% |
| !! | CTAAAATTTAACAATTAGGA+AGG | - | chr1_1:28013265-28013284 | None:intergenic | 20.0% |
| !!! | TATCTACGTTTTCTATTTAT+TGG | + | chr1_1:28013562-28013581 | Msa0016900:intron | 20.0% |
| !!! | TTTTCCTTAACTAATAAGAT+TGG | + | chr1_1:28013672-28013691 | Msa0016900:intron | 20.0% |
| !! | AATACCAATCTTATTAGTTA+AGG | - | chr1_1:28013679-28013698 | None:intergenic | 20.0% |
| !! | TTTATGGTTGTATCTATTTA+TGG | - | chr1_1:28013809-28013828 | None:intergenic | 20.0% |
| !! | AAATAGATACAACCATAAAA+TGG | + | chr1_1:28013810-28013829 | Msa0016900:intron | 20.0% |
| !! | AAAATAATTACAAAAAGAGG+GGG | - | chr1_1:28014199-28014218 | None:intergenic | 20.0% |
| !! | GAAAATAATTACAAAAAGAG+GGG | - | chr1_1:28014200-28014219 | None:intergenic | 20.0% |
| !! | GGAAAATAATTACAAAAAGA+GGG | - | chr1_1:28014201-28014220 | None:intergenic | 20.0% |
| !!! | AACTTTTTTTTTGATAAGCA+AGG | - | chr1_1:28014331-28014350 | None:intergenic | 20.0% |
| !!! | TATTGCATTTTTTTATTACC+TGG | - | chr1_1:28014604-28014623 | None:intergenic | 20.0% |
| !! | AATAGATGATATAAAATGGA+GGG | - | chr1_1:28014685-28014704 | None:intergenic | 20.0% |
| !! | AAATAGATGATATAAAATGG+AGG | - | chr1_1:28014686-28014705 | None:intergenic | 20.0% |
| !! | GGAAAATAGATGATATAAAA+TGG | - | chr1_1:28014689-28014708 | None:intergenic | 20.0% |
| !! | TTAGATCAATGCATTATTAA+AGG | - | chr1_1:28014710-28014729 | None:intergenic | 20.0% |
| !! | AACACTACTATTTATATATG+AGG | + | chr1_1:28005213-28005232 | Msa0016900:intron | 20.0% |
| !!! | TTTTGAATGAATTGTATTGA+TGG | + | chr1_1:28005306-28005325 | Msa0016900:intron | 20.0% |
| !!! | TTTGAATGAATTGTATTGAT+GGG | + | chr1_1:28005307-28005326 | Msa0016900:intron | 20.0% |
| !! | AAATATATGCTATTAAAGTG+TGG | - | chr1_1:28014966-28014985 | None:intergenic | 20.0% |
| !! | TTTTGACAGAAACTAAACTT+TGG | + | chr1_1:28004874-28004893 | Msa0016900:CDS | 25.0% |
| !!! | ATTTTTTATTACCTGGAGAT+TGG | - | chr1_1:28005061-28005080 | None:intergenic | 25.0% |
| !! | TTTCTTAAGAGGTACAATTT+AGG | + | chr1_1:28005173-28005192 | Msa0016900:intron | 25.0% |
| ! | ATTGACAATGAAAGGAATTA+GGG | - | chr1_1:28005253-28005272 | None:intergenic | 25.0% |
| ! | TATTGACAATGAAAGGAATT+AGG | - | chr1_1:28005254-28005273 | None:intergenic | 25.0% |
| ! | ATTCATTCAAAACCTAATAC+CGG | - | chr1_1:28005298-28005317 | None:intergenic | 25.0% |
| !! | TTGAATGAATTGTATTGATG+GGG | + | chr1_1:28005308-28005327 | Msa0016900:intron | 25.0% |
| ! | TATCCATAAATGTATGAATG+TGG | - | chr1_1:28005356-28005375 | None:intergenic | 25.0% |
| ! | TTATCTCTTAAACTTTCGAT+TGG | + | chr1_1:28005815-28005834 | Msa0016900:intron | 25.0% |
| !! | TAGGTGTTAAATCCATATTT+TGG | + | chr1_1:28005903-28005922 | Msa0016900:intron | 25.0% |
| ! | ACTTCGAAATATGATATTGA+GGG | - | chr1_1:28006066-28006085 | None:intergenic | 25.0% |
| !! | CAACTAGGACTAAATATTTT+TGG | - | chr1_1:28006364-28006383 | None:intergenic | 25.0% |
| ! | GAAAAATGGTTAGTACTAAA+TGG | - | chr1_1:28006480-28006499 | None:intergenic | 25.0% |
| !! | TATTTTCAGAGTCTTAGTTT+AGG | + | chr1_1:28006560-28006579 | Msa0016900:intron | 25.0% |
| ! | AACTAAGATCAATTATCATC+AGG | + | chr1_1:28006843-28006862 | Msa0016900:intron | 25.0% |
| !!! | TTCTTGTCTTTGATTTTGAT+TGG | - | chr1_1:28007100-28007119 | None:intergenic | 25.0% |
| ! | AATCAAATAAATTAAGTCGG+AGG | + | chr1_1:28007745-28007764 | Msa0016900:intron | 25.0% |
| ! | AGAATGGATATGGAAATATT+TGG | - | chr1_1:28007880-28007899 | None:intergenic | 25.0% |
| ! | ATATTTCCATATCCATTCTT+AGG | + | chr1_1:28007881-28007900 | Msa0016900:intron | 25.0% |
| !! | AAAAAGAAATTTTCGTCTAG+AGG | - | chr1_1:28008121-28008140 | None:intergenic | 25.0% |
| !!! | AATTAGCAACATTTTGAGTT+TGG | + | chr1_1:28008266-28008285 | Msa0016900:intron | 25.0% |
| !!! | ATTAGCAACATTTTGAGTTT+GGG | + | chr1_1:28008267-28008286 | Msa0016900:intron | 25.0% |
| ! | GAAAAAAATGTAAATGACCA+TGG | + | chr1_1:28008324-28008343 | Msa0016900:intron | 25.0% |
| !!! | AATTTTTTTGTGTAGATCCA+TGG | - | chr1_1:28008344-28008363 | None:intergenic | 25.0% |
| ! | ATAGAAAATAGTATGTACTG+TGG | + | chr1_1:28008755-28008774 | Msa0016900:intron | 25.0% |
| ! | GAATCATTCATCACATTAAT+AGG | - | chr1_1:28008799-28008818 | None:intergenic | 25.0% |
| !! | TATGTTTTTCTTTCGTTACT+TGG | + | chr1_1:28008874-28008893 | Msa0016900:intron | 25.0% |
| !! | ATGTTTTTCTTTCGTTACTT+GGG | + | chr1_1:28008875-28008894 | Msa0016900:intron | 25.0% |
| !! | ACAAGCAACAATTTAAGTTT+GGG | + | chr1_1:28008898-28008917 | Msa0016900:intron | 25.0% |
| !!! | GTTTTTCAGTTATTTTCAGT+AGG | + | chr1_1:28008950-28008969 | Msa0016900:intron | 25.0% |
| !!! | TCTTTTTCTGCTTTTATTCT+GGG | + | chr1_1:28009316-28009335 | Msa0016900:intron | 25.0% |
| !! | AAACATACTCTAGAAAATCA+AGG | - | chr1_1:28009483-28009502 | None:intergenic | 25.0% |
| !!! | CAACCTCTATTTATTTTTGT+TGG | + | chr1_1:28009556-28009575 | Msa0016900:intron | 25.0% |
| ! | ACGAGAGTAATAACAATATT+AGG | - | chr1_1:28009706-28009725 | None:intergenic | 25.0% |
| ! | TTCTTAGAGAGATAGTTATT+AGG | - | chr1_1:28009760-28009779 | None:intergenic | 25.0% |
| !! | ATATTCTAAAGATTGAGTCT+TGG | + | chr1_1:28009945-28009964 | Msa0016900:intron | 25.0% |
| ! | AGGATGAAAATATGAAGATT+CGG | + | chr1_1:28009997-28010016 | Msa0016900:intron | 25.0% |
| !! | ACAATTCATCTTTTGTTCTA+TGG | + | chr1_1:28010250-28010269 | Msa0016900:intron | 25.0% |
| ! | GAAGAGGAACATAAAATAAA+GGG | - | chr1_1:28010314-28010333 | None:intergenic | 25.0% |
| ! | AGAAGAGGAACATAAAATAA+AGG | - | chr1_1:28010315-28010334 | None:intergenic | 25.0% |
| ! | TTACATAAAATTAGGGTTCA+AGG | - | chr1_1:28010424-28010443 | None:intergenic | 25.0% |
| ! | GGTGAAATAGATTAGAAATT+AGG | - | chr1_1:28010448-28010467 | None:intergenic | 25.0% |
| !!! | AACATAAAGTTCTAGGTTTA+AGG | + | chr1_1:28010779-28010798 | Msa0016900:intron | 25.0% |
| !!! | TTTAAGGTTTGATTTGAGAA+GGG | + | chr1_1:28010795-28010814 | Msa0016900:intron | 25.0% |
| !!! | GAGTTTTGAGTTATAAAGTT+TGG | - | chr1_1:28010889-28010908 | None:intergenic | 25.0% |
| !! | TTGAAAGCATAGACTTAAAT+TGG | - | chr1_1:28011285-28011304 | None:intergenic | 25.0% |
| ! | ATGTCACGTTTATTTATTTC+AGG | - | chr1_1:28011422-28011441 | None:intergenic | 25.0% |
| ! | TTATTACTTGGTAAACGATT+TGG | + | chr1_1:28011670-28011689 | Msa0016900:intron | 25.0% |
| ! | GTAATAGTAAATCAAGCAAA+TGG | - | chr1_1:28011858-28011877 | None:intergenic | 25.0% |
| ! | GTAAAAATCTGTAACTTAAG+GGG | + | chr1_1:28011886-28011905 | Msa0016900:intron | 25.0% |
| !! | CATTGTCATTTATATTCACA+AGG | - | chr1_1:28012151-28012170 | None:intergenic | 25.0% |
| !!! | CTTCACTTGCTTTTTTTTTT+TGG | - | chr1_1:28012398-28012417 | None:intergenic | 25.0% |
| ! | AACCAAAAAAAATAGACGTA+CGG | + | chr1_1:28012550-28012569 | Msa0016900:intron | 25.0% |
| !! | TTATCACATAGCTTTCTTTT+TGG | + | chr1_1:28012626-28012645 | Msa0016900:intron | 25.0% |
| !!! | CTTTCTTTTTGGTTTTCTAT+AGG | + | chr1_1:28012637-28012656 | Msa0016900:intron | 25.0% |
| ! | TTGAACAAGATTACTTTCAA+CGG | - | chr1_1:28012669-28012688 | None:intergenic | 25.0% |
| ! | ACATGGTCAAAGAATAAATA+CGG | + | chr1_1:28012690-28012709 | Msa0016900:intron | 25.0% |
| ! | AAATTACAATATTCCATGAC+GGG | + | chr1_1:28012827-28012846 | Msa0016900:intron | 25.0% |
| !!! | TGTTTTAATTTAGACCAGTT+TGG | - | chr1_1:28012964-28012983 | None:intergenic | 25.0% |
| !!! | GTTTTATTTTTTAGATCGGT+TGG | - | chr1_1:28012988-28013007 | None:intergenic | 25.0% |
| ! | TAAAGACACAGTAAAATCAT+AGG | - | chr1_1:28013316-28013335 | None:intergenic | 25.0% |
| !! | ACCACGAGTATTTAAATTTT+TGG | + | chr1_1:28013463-28013482 | Msa0016900:intron | 25.0% |
| ! | TCCAAAAATTTAAATACTCG+TGG | - | chr1_1:28013467-28013486 | None:intergenic | 25.0% |
| ! | AGATAAAACAAAATACAAGG+TGG | - | chr1_1:28013547-28013566 | None:intergenic | 25.0% |
| ! | CGTAGATAAAACAAAATACA+AGG | - | chr1_1:28013550-28013569 | None:intergenic | 25.0% |
| ! | ACATTTGAAAATAACCACTA+TGG | - | chr1_1:28013599-28013618 | None:intergenic | 25.0% |
| !! | TTTTCAAATGTCAGCATAAT+TGG | + | chr1_1:28013608-28013627 | Msa0016900:intron | 25.0% |
| ! | TTTCAAATGTCAGCATAATT+GGG | + | chr1_1:28013609-28013628 | Msa0016900:intron | 25.0% |
| !!! | TATTTTTTCTAAGCCTTTGT+TGG | + | chr1_1:28013874-28013893 | Msa0016900:intron | 25.0% |
| ! | ATCTATCCCTAAAAAAATCA+AGG | - | chr1_1:28014066-28014085 | None:intergenic | 25.0% |
| ! | AAATAATTACAAAAAGAGGG+GGG | - | chr1_1:28014198-28014217 | None:intergenic | 25.0% |
| ! | GGGAAAATAATTACAAAAAG+AGG | - | chr1_1:28014202-28014221 | None:intergenic | 25.0% |
| !!! | ATAATTTTTTTTGAGTGTGG+CGG | + | chr1_1:28014232-28014251 | Msa0016900:intron | 25.0% |
| !! | TTTTGACAGAAACTAAACTT+TGG | + | chr1_1:28004874-28004893 | Msa0016900:CDS | 25.0% |
| !!! | TTTTTTTATTACCTGGAGTT+TGG | - | chr1_1:28014597-28014616 | None:intergenic | 25.0% |
| ! | ATTGACAATGAAAGGAATTA+GGG | - | chr1_1:28005253-28005272 | None:intergenic | 25.0% |
| ! | TATTGACAATGAAAGGAATT+AGG | - | chr1_1:28005254-28005273 | None:intergenic | 25.0% |
| !! | TTGAATGAATTGTATTGATG+GGG | + | chr1_1:28005308-28005327 | Msa0016900:intron | 25.0% |
| ! | TATCCATAAATGTATGAATG+TGG | - | chr1_1:28005356-28005375 | None:intergenic | 25.0% |
| ! | GATATAAGATTGAGATTGAT+TGG | - | chr1_1:28014944-28014963 | None:intergenic | 25.0% |
| ! | TTATATGTATACATCGTACA+CGG | - | chr1_1:28015031-28015050 | None:intergenic | 25.0% |
| !! | GTCTGATAACTGATTTTGTT+GGG | - | chr1_1:28004994-28005013 | None:intergenic | 30.0% |
| ATGCTCTTATTGACAATGAA+AGG | - | chr1_1:28005261-28005280 | None:intergenic | 30.0% | |
| TTCATTCAAAACCTAATACC+GGG | - | chr1_1:28005297-28005316 | None:intergenic | 30.0% | |
| ACTCCACATTCATACATTTA+TGG | + | chr1_1:28005350-28005369 | Msa0016900:intron | 30.0% | |
| ATTTGATTCTTCACAATCGA+TGG | - | chr1_1:28005496-28005515 | None:intergenic | 30.0% | |
| ATCGATTGTGAAGAATCAAA+TGG | + | chr1_1:28005495-28005514 | Msa0016900:CDS | 30.0% | |
| AACAAAAGCTTCAAAGTCTA+TGG | + | chr1_1:28005527-28005546 | Msa0016900:CDS | 30.0% | |
| ACAAAAGCTTCAAAGTCTAT+GGG | + | chr1_1:28005528-28005547 | Msa0016900:CDS | 30.0% | |
| TAGCCTAGTATATTGTGAAT+CGG | + | chr1_1:28005705-28005724 | Msa0016900:intron | 30.0% | |
| CTTCGAAATATGATATTGAG+GGG | - | chr1_1:28006065-28006084 | None:intergenic | 30.0% | |
| GACTTCGAAATATGATATTG+AGG | - | chr1_1:28006067-28006086 | None:intergenic | 30.0% | |
| ATTTCGAAGTCTATTCTTGA+TGG | + | chr1_1:28006076-28006095 | Msa0016900:intron | 30.0% | |
| ! | ATGGTTAGGCCATAATATTT+TGG | + | chr1_1:28006095-28006114 | Msa0016900:intron | 30.0% |
| ! | TGGTTAGGCCATAATATTTT+GGG | + | chr1_1:28006096-28006115 | Msa0016900:intron | 30.0% |
| !! | CCATAATATTTTGGGTGTTA+CGG | + | chr1_1:28006104-28006123 | Msa0016900:intron | 30.0% |
| GAACAACAATTTCGTGTATT+CGG | + | chr1_1:28006126-28006145 | Msa0016900:intron | 30.0% | |
| ! | GATGTGTTGCATTTTGAATA+GGG | - | chr1_1:28006183-28006202 | None:intergenic | 30.0% |
| ! | TGATGTGTTGCATTTTGAAT+AGG | - | chr1_1:28006184-28006203 | None:intergenic | 30.0% |
| ! | AGGGTATGTTTATTCTTTTG+TGG | - | chr1_1:28006222-28006241 | None:intergenic | 30.0% |
| GTGAGTCGTAGTAAAAATAA+CGG | + | chr1_1:28006610-28006629 | Msa0016900:intron | 30.0% | |
| GATCGAGTCTATTTAACATT+AGG | + | chr1_1:28006653-28006672 | Msa0016900:intron | 30.0% | |
| ACTATTAGTCATAGAGTCTT+AGG | + | chr1_1:28006739-28006758 | Msa0016900:intron | 30.0% | |
| ! | TACAATTAGAGAGGTTGATT+AGG | - | chr1_1:28006898-28006917 | None:intergenic | 30.0% |
| ! | CATCTAGTTTACAATTAGAG+AGG | - | chr1_1:28006907-28006926 | None:intergenic | 30.0% |
| GTGTTGTATTAACTTCTTCA+AGG | + | chr1_1:28006937-28006956 | Msa0016900:intron | 30.0% | |
| ! | TTGATCTTCCTCTTTAGTTT+GGG | - | chr1_1:28006965-28006984 | None:intergenic | 30.0% |
| TGAGAACAAAGATAACAACA+AGG | + | chr1_1:28006990-28007009 | Msa0016900:intron | 30.0% | |
| ATAACAACAAGGAAAACAAC+TGG | + | chr1_1:28007001-28007020 | Msa0016900:CDS | 30.0% | |
| TAACAACAAGGAAAACAACT+GGG | + | chr1_1:28007002-28007021 | Msa0016900:CDS | 30.0% | |
| ! | TTTTTAGACATGTGTGTATC+TGG | - | chr1_1:28007346-28007365 | None:intergenic | 30.0% |
| ACATGTCTAAAAACAACACT+TGG | + | chr1_1:28007353-28007372 | Msa0016900:intron | 30.0% | |
| TATCATGCTCTTGAATGTAA+GGG | - | chr1_1:28007779-28007798 | None:intergenic | 30.0% | |
| !! | TTCAAGAGCATGATACTTTT+CGG | + | chr1_1:28007784-28007803 | Msa0016900:intron | 30.0% |
| TATGCTATTCAGAAAAGAGT+TGG | - | chr1_1:28007840-28007859 | None:intergenic | 30.0% | |
| ! | TCTTTTCTGAATAGCATAAC+CGG | + | chr1_1:28007842-28007861 | Msa0016900:intron | 30.0% |
| TAACAACCTAAGAATGGATA+TGG | - | chr1_1:28007890-28007909 | None:intergenic | 30.0% | |
| AGTATCTAACAACCTAAGAA+TGG | - | chr1_1:28007896-28007915 | None:intergenic | 30.0% | |
| ! | GCAATTTTTGCTTGAATTTG+CGG | + | chr1_1:28007975-28007994 | Msa0016900:intron | 30.0% |
| !! | ATGCTTTGAAACTAAGTTTG+AGG | + | chr1_1:28008232-28008251 | Msa0016900:intron | 30.0% |
| !!! | TTAGCAACATTTTGAGTTTG+GGG | + | chr1_1:28008268-28008287 | Msa0016900:intron | 30.0% |
| TTCCTTGATTCAAACAAGAT+GGG | - | chr1_1:28008464-28008483 | None:intergenic | 30.0% | |
| TGGATATAATTTGGGAAAGT+AGG | - | chr1_1:28008560-28008579 | None:intergenic | 30.0% | |
| GTTAAGGGTGGATATAATTT+GGG | - | chr1_1:28008568-28008587 | None:intergenic | 30.0% | |
| TATAACTTGGCTTAGGTTAA+GGG | - | chr1_1:28008583-28008602 | None:intergenic | 30.0% | |
| TTATAACTTGGCTTAGGTTA+AGG | - | chr1_1:28008584-28008603 | None:intergenic | 30.0% | |
| ! | AAACTTTGAGGGTTATAACT+TGG | - | chr1_1:28008596-28008615 | None:intergenic | 30.0% |
| ACACACTAAGAAAACTTTGA+GGG | - | chr1_1:28008607-28008626 | None:intergenic | 30.0% | |
| ! | GACAAGCAACAATTTAAGTT+TGG | + | chr1_1:28008897-28008916 | Msa0016900:intron | 30.0% |
| ! | CAAGCAACAATTTAAGTTTG+GGG | + | chr1_1:28008899-28008918 | Msa0016900:intron | 30.0% |
| !! | AGTAGGTTTTAGCAACAAAA+AGG | + | chr1_1:28008967-28008986 | Msa0016900:intron | 30.0% |
| AGAACAATTGCCTATGATTT+CGG | + | chr1_1:28008999-28009018 | Msa0016900:intron | 30.0% | |
| TTAAAAAGTCCCGAAATCAT+AGG | - | chr1_1:28009012-28009031 | None:intergenic | 30.0% | |
| ! | AATCATGCTATTTGAAACTG+AGG | + | chr1_1:28009113-28009132 | Msa0016900:intron | 30.0% |
| !! | GTCTTTTTCTGCTTTTATTC+TGG | + | chr1_1:28009315-28009334 | Msa0016900:intron | 30.0% |
| TAAACGAGAAATTCTGAATG+AGG | - | chr1_1:28009401-28009420 | None:intergenic | 30.0% | |
| AGGAGAAGATAAAAATTCTC+CGG | - | chr1_1:28009463-28009482 | None:intergenic | 30.0% | |
| AGGTCAGAAGTAAACTAATA+GGG | - | chr1_1:28010138-28010157 | None:intergenic | 30.0% | |
| TAGGTCAGAAGTAAACTAAT+AGG | - | chr1_1:28010139-28010158 | None:intergenic | 30.0% | |
| TCATCACAAATATTAAGCGA+TGG | + | chr1_1:28010535-28010554 | Msa0016900:intron | 30.0% | |
| CTCAAAACATTATTGTCTCA+AGG | - | chr1_1:28010637-28010656 | None:intergenic | 30.0% | |
| !! | CAATAATGTTTTGAGCTTCA+AGG | + | chr1_1:28010642-28010661 | Msa0016900:intron | 30.0% |
| TAGCAATCAACCATGAAAAT+AGG | + | chr1_1:28010672-28010691 | Msa0016900:intron | 30.0% | |
| ! | GAAACTTGTCTTTAGAAAGA+AGG | + | chr1_1:28010753-28010772 | Msa0016900:intron | 30.0% |
| AAGGTCTAACATAAAGTTCT+AGG | + | chr1_1:28010772-28010791 | Msa0016900:intron | 30.0% | |
| !! | GTTTAAGGTTTGATTTGAGA+AGG | + | chr1_1:28010794-28010813 | Msa0016900:intron | 30.0% |
| TTCTACCGAAGTAGTAAAAA+GGG | - | chr1_1:28010967-28010986 | None:intergenic | 30.0% | |
| ! | TTGAAGAGAATGGTTCTATT+AGG | - | chr1_1:28011147-28011166 | None:intergenic | 30.0% |
| AATAAGTAACGCGAATTGTT+TGG | + | chr1_1:28011604-28011623 | Msa0016900:intron | 30.0% | |
| AAAAAAACGATGTACGGATT+AGG | - | chr1_1:28011704-28011723 | None:intergenic | 30.0% | |
| CAAGCTTATAACCTAAGTAA+GGG | - | chr1_1:28011760-28011779 | None:intergenic | 30.0% | |
| !! | AGGAAGCAGCTTTAAATATT+TGG | - | chr1_1:28012439-28012458 | None:intergenic | 30.0% |
| ! | ATGTCTAGATACAGTTTTCA+AGG | - | chr1_1:28012459-28012478 | None:intergenic | 30.0% |
| !!! | TACCGTACGTCTATTTTTTT+TGG | - | chr1_1:28012555-28012574 | None:intergenic | 30.0% |
| AAGTAATCTTGTTCAAGACA+TGG | + | chr1_1:28012673-28012692 | Msa0016900:intron | 30.0% | |
| AAACCTAAAGCTTGGTTTAT+CGG | + | chr1_1:28012728-28012747 | Msa0016900:intron | 30.0% | |
| TTTAGTTAAGATGAATGAGC+AGG | - | chr1_1:28012809-28012828 | None:intergenic | 30.0% | |
| GGGAAATCATATTCAAAGTA+GGG | + | chr1_1:28012928-28012947 | Msa0016900:intron | 30.0% | |
| !! | GTTCGGTTTGATTTTGAAAA+AGG | - | chr1_1:28013089-28013108 | None:intergenic | 30.0% |
| TATTATTTGTGCATGTGGTT+CGG | - | chr1_1:28013106-28013125 | None:intergenic | 30.0% | |
| AATTCAGATTGGATGAATTC+TGG | - | chr1_1:28013441-28013460 | None:intergenic | 30.0% | |
| TACTGATCTAAATCATACCA+TGG | + | chr1_1:28013508-28013527 | Msa0016900:intron | 30.0% | |
| ACTGATCTAAATCATACCAT+GGG | + | chr1_1:28013509-28013528 | Msa0016900:intron | 30.0% | |
| ! | GTATCTATTTATGGTTGGTT+AGG | - | chr1_1:28013800-28013819 | None:intergenic | 30.0% |
| TGGTTGTATCTATTTATGGT+TGG | - | chr1_1:28013805-28013824 | None:intergenic | 30.0% | |
| TAGATACAACCATAAAATGG+AGG | + | chr1_1:28013813-28013832 | Msa0016900:intron | 30.0% | |
| ! | CCAAATATTCCTCCATTTTA+TGG | - | chr1_1:28013825-28013844 | None:intergenic | 30.0% |
| CCATAAAATGGAGGAATATT+TGG | + | chr1_1:28013822-28013841 | Msa0016900:intron | 30.0% | |
| !! | AAAAATAAGAAGAGCACTAG+TGG | - | chr1_1:28013861-28013880 | None:intergenic | 30.0% |
| AACATAATAGGAACCAACAA+AGG | - | chr1_1:28013890-28013909 | None:intergenic | 30.0% | |
| !! | TGTTGGTTCCTATTATGTTA+CGG | + | chr1_1:28013891-28013910 | Msa0016900:intron | 30.0% |
| ! | TCATCTCATATTTTTCGTGA+AGG | + | chr1_1:28013956-28013975 | Msa0016900:intron | 30.0% |
| !!! | TGTGGTCCTTGATTTTTTTA+GGG | + | chr1_1:28014057-28014076 | Msa0016900:intron | 30.0% |
| !!! | GATTTTTTTAGGGATAGATG+TGG | + | chr1_1:28014067-28014086 | Msa0016900:intron | 30.0% |
| !!! | TTTTTCTGTTCTGTTTTTGC+TGG | + | chr1_1:28014146-28014165 | Msa0016900:intron | 30.0% |
| !!! | TTTTTGCTGGTTTTTTGTTG+AGG | + | chr1_1:28014159-28014178 | Msa0016900:intron | 30.0% |
| !!! | TTTTGCTGGTTTTTTGTTGA+GGG | + | chr1_1:28014160-28014179 | Msa0016900:intron | 30.0% |
| ! | CTTTGGAAGATAGTTATCAA+TGG | - | chr1_1:28014503-28014522 | None:intergenic | 30.0% |
| !! | GTCTGATAACTGATTTTGTT+GGG | - | chr1_1:28004994-28005013 | None:intergenic | 30.0% |
| ATGCTCTTATTGACAATGAA+AGG | - | chr1_1:28005261-28005280 | None:intergenic | 30.0% | |
| ACTCCACATTCATACATTTA+TGG | + | chr1_1:28005350-28005369 | Msa0016900:intron | 30.0% | |
| ATGCAAATACAACAAGAGAT+TGG | + | chr1_1:28014903-28014922 | Msa0016900:intron | 30.0% | |
| AAATACAACAAGAGATTGGT+TGG | + | chr1_1:28014907-28014926 | Msa0016900:intron | 30.0% | |
| ATTTGATTCTTCACAATCGA+TGG | - | chr1_1:28005496-28005515 | None:intergenic | 30.0% | |
| ATCGATTGTGAAGAATCAAA+TGG | + | chr1_1:28005495-28005514 | Msa0016900:CDS | 30.0% | |
| AACAAAAGCTTCAAAGTCTA+TGG | + | chr1_1:28005527-28005546 | Msa0016900:CDS | 30.0% | |
| ACAAAAGCTTCAAAGTCTAT+GGG | + | chr1_1:28005528-28005547 | Msa0016900:CDS | 30.0% | |
| GAAACTAAACTTTGGCGTAA+AGG | + | chr1_1:28004882-28004901 | Msa0016900:CDS | 35.0% | |
| !! | CATAGTATTGGCTTCTCATA+CGG | - | chr1_1:28004909-28004928 | None:intergenic | 35.0% |
| CTTCGGAAGATAGTTATCAA+GGG | - | chr1_1:28004967-28004986 | None:intergenic | 35.0% | |
| TCTTCGGAAGATAGTTATCA+AGG | - | chr1_1:28004968-28004987 | None:intergenic | 35.0% | |
| ! | TGATTTTGTTGGGATGTCTT+CGG | - | chr1_1:28004984-28005003 | None:intergenic | 35.0% |
| !! | GGTCTGATAACTGATTTTGT+TGG | - | chr1_1:28004995-28005014 | None:intergenic | 35.0% |
| ! | GAATTGTATTGATGGGGATT+AGG | + | chr1_1:28005314-28005333 | Msa0016900:intron | 35.0% |
| TCATACACGGTACATATCAA+TGG | - | chr1_1:28005434-28005453 | None:intergenic | 35.0% | |
| GATTGTGAAGAATCAAATGG+AGG | + | chr1_1:28005498-28005517 | Msa0016900:CDS | 35.0% | |
| TGTATACCAAGCAATGAGAT+AGG | + | chr1_1:28005616-28005635 | Msa0016900:CDS | 35.0% | |
| !! | ATGCCGATTCACAATATACT+AGG | - | chr1_1:28005711-28005730 | None:intergenic | 35.0% |
| !! | AATGATTTTGAAGGAGAGAG+TGG | + | chr1_1:28005879-28005898 | Msa0016900:intron | 35.0% |
| ! | GAAGTCTATTCTTGATGGTT+AGG | + | chr1_1:28006081-28006100 | Msa0016900:intron | 35.0% |
| CCGTAACACCCAAAATATTA+TGG | - | chr1_1:28006107-28006126 | None:intergenic | 35.0% | |
| ! | AATGAAGCATCTCAAGAGAT+AGG | - | chr1_1:28006294-28006313 | None:intergenic | 35.0% |
| AGATGGAGTCTGTTAAGTTT+AGG | + | chr1_1:28006805-28006824 | Msa0016900:intron | 35.0% | |
| GTTGATCTTCCTCTTTAGTT+TGG | - | chr1_1:28006966-28006985 | None:intergenic | 35.0% | |
| ACTAAAGAGGAAGATCAACA+TGG | + | chr1_1:28006967-28006986 | Msa0016900:intron | 35.0% | |
| AACAACAAGGAAAACAACTG+GGG | + | chr1_1:28007003-28007022 | Msa0016900:CDS | 35.0% | |
| ACAAGAATGCTTTCAGAAGA+AGG | + | chr1_1:28007113-28007132 | Msa0016900:CDS | 35.0% | |
| CAAGAATGCTTTCAGAAGAA+GGG | + | chr1_1:28007114-28007133 | Msa0016900:CDS | 35.0% | |
| TGATCAAGGATCAAACTAGA+TGG | + | chr1_1:28007245-28007264 | Msa0016900:intron | 35.0% | |
| TGCAAAATCCAAGTAGTACA+AGG | + | chr1_1:28007314-28007333 | Msa0016900:intron | 35.0% | |
| GCAAAATCCAAGTAGTACAA+GGG | + | chr1_1:28007315-28007334 | Msa0016900:intron | 35.0% | |
| ! | GTCATTAGCTTGACGAAATA+GGG | - | chr1_1:28007427-28007446 | None:intergenic | 35.0% |
| ! | AGTCATTAGCTTGACGAAAT+AGG | - | chr1_1:28007428-28007447 | None:intergenic | 35.0% |
| !! | ACTCAAAAGAAGCACTAGAT+AGG | + | chr1_1:28007445-28007464 | Msa0016900:intron | 35.0% |
| GTATCATGCTCTTGAATGTA+AGG | - | chr1_1:28007780-28007799 | None:intergenic | 35.0% | |
| !! | TCAAGAGCATGATACTTTTC+GGG | + | chr1_1:28007785-28007804 | Msa0016900:intron | 35.0% |
| !! | TTGCTAGTGAAGGTACTTAT+AGG | + | chr1_1:28007810-28007829 | Msa0016900:intron | 35.0% |
| GTTAGGTTATTATACACACG+AGG | + | chr1_1:28008018-28008037 | Msa0016900:intron | 35.0% | |
| TATAGAAAAGGTGGCTTCAA+AGG | - | chr1_1:28008067-28008086 | None:intergenic | 35.0% | |
| ATAGAGTGCATGTAATGTGT+AGG | - | chr1_1:28008170-28008189 | None:intergenic | 35.0% | |
| ! | TACCCATCTTGTTTGAATCA+AGG | + | chr1_1:28008459-28008478 | Msa0016900:intron | 35.0% |
| CTTCCTTGATTCAAACAAGA+TGG | - | chr1_1:28008465-28008484 | None:intergenic | 35.0% | |
| ! | CATCTTGTTTGAATCAAGGA+AGG | + | chr1_1:28008463-28008482 | Msa0016900:intron | 35.0% |
| TTGTTTGAATCAAGGAAGGA+AGG | + | chr1_1:28008467-28008486 | Msa0016900:intron | 35.0% | |
| ACAGTGCAGTAATGTTTAGA+AGG | + | chr1_1:28008493-28008512 | Msa0016900:intron | 35.0% | |
| AATGTTTAGAAGGAATCCCT+AGG | + | chr1_1:28008503-28008522 | Msa0016900:intron | 35.0% | |
| AGTAGGCTAACAAAAGAACT+TGG | - | chr1_1:28008543-28008562 | None:intergenic | 35.0% | |
| GGTTAAGGGTGGATATAATT+TGG | - | chr1_1:28008569-28008588 | None:intergenic | 35.0% | |
| CACACACTAAGAAAACTTTG+AGG | - | chr1_1:28008608-28008627 | None:intergenic | 35.0% | |
| GAACAATTGCCTATGATTTC+GGG | + | chr1_1:28009000-28009019 | Msa0016900:intron | 35.0% | |
| !!! | GTCTGTAATTCTAGTTTTCC+CGG | + | chr1_1:28009048-28009067 | Msa0016900:intron | 35.0% |
| ACCCTAAAATTGCTATGTTC+CGG | - | chr1_1:28009070-28009089 | None:intergenic | 35.0% | |
| TAGCACATGAAAAATGCCTA+GGG | + | chr1_1:28009165-28009184 | Msa0016900:intron | 35.0% | |
| TATAGTGAGAGTTTCTACCT+GGG | - | chr1_1:28009366-28009385 | None:intergenic | 35.0% | |
| TTATAGTGAGAGTTTCTACC+TGG | - | chr1_1:28009367-28009386 | None:intergenic | 35.0% | |
| ! | GAATTTCTCGTTTAGAACTG+TGG | + | chr1_1:28009407-28009426 | Msa0016900:intron | 35.0% |
| AAAGATCGAAACCCTAGATT+AGG | + | chr1_1:28009661-28009680 | Msa0016900:intron | 35.0% | |
| AAACCCTAGATTAGGTACTT+AGG | + | chr1_1:28009669-28009688 | Msa0016900:intron | 35.0% | |
| CAACCTAAGTACCTAATCTA+GGG | - | chr1_1:28009675-28009694 | None:intergenic | 35.0% | |
| ACAACCTAAGTACCTAATCT+AGG | - | chr1_1:28009676-28009695 | None:intergenic | 35.0% | |
| GTTCATTGTAGACATAGAAG+AGG | - | chr1_1:28010330-28010349 | None:intergenic | 35.0% | |
| TAAAATTAGGGTTCAAGGCT+TGG | - | chr1_1:28010419-28010438 | None:intergenic | 35.0% | |
| GGAACAAGTGAATATAGACA+AGG | + | chr1_1:28010582-28010601 | Msa0016900:intron | 35.0% | |
| AGACCAAAAGAAGATGTGAT+AGG | + | chr1_1:28010723-28010742 | Msa0016900:intron | 35.0% | |
| ! | TAGCCTATCACATCTTCTTT+TGG | - | chr1_1:28010729-28010748 | None:intergenic | 35.0% |
| TAAAAGAGCCTTGGGATTAT+TGG | - | chr1_1:28010838-28010857 | None:intergenic | 35.0% | |
| ! | CGATACCCTTTTTACTACTT+CGG | + | chr1_1:28010959-28010978 | Msa0016900:intron | 35.0% |
| GTTCTACCGAAGTAGTAAAA+AGG | - | chr1_1:28010968-28010987 | None:intergenic | 35.0% | |
| TGCTAAACCTAGAATGTAAC+TGG | + | chr1_1:28011084-28011103 | Msa0016900:intron | 35.0% | |
| CTACTAACCAGTTACATTCT+AGG | - | chr1_1:28011094-28011113 | None:intergenic | 35.0% | |
| GTTCTATTAGGTTTATTCCC+CGG | - | chr1_1:28011135-28011154 | None:intergenic | 35.0% | |
| GCTTTCAATTACCTTAGAGA+CGG | + | chr1_1:28011297-28011316 | Msa0016900:intron | 35.0% | |
| ACCTTTCTGCAACAAAAAAC+AGG | + | chr1_1:28011504-28011523 | Msa0016900:intron | 35.0% | |
| !!! | ACCTGTTTTTTGTTGCAGAA+AGG | - | chr1_1:28011508-28011527 | None:intergenic | 35.0% |
| TGGGCTAAAAAAACGATGTA+CGG | - | chr1_1:28011710-28011729 | None:intergenic | 35.0% | |
| !! | TAACCTAAGTAAGGGCATTA+AGG | - | chr1_1:28011752-28011771 | None:intergenic | 35.0% |
| GCAAGCTTATAACCTAAGTA+AGG | - | chr1_1:28011761-28011780 | None:intergenic | 35.0% | |
| TAAGCTTGCGTTACAAATCT+CGG | + | chr1_1:28011772-28011791 | Msa0016900:intron | 35.0% | |
| GTAACTTAAGGGGTAAAAAC+AGG | + | chr1_1:28011896-28011915 | Msa0016900:intron | 35.0% | |
| TTATGCATAGGCTAAACACT+CGG | + | chr1_1:28012018-28012037 | Msa0016900:intron | 35.0% | |
| AATGGTCATACGATTACAAG+TGG | + | chr1_1:28012043-28012062 | Msa0016900:intron | 35.0% | |
| ! | TTTTAGATAGGGGAAGTCAT+AGG | + | chr1_1:28012219-28012238 | Msa0016900:intron | 35.0% |
| TTTAGATAGGGGAAGTCATA+GGG | + | chr1_1:28012220-28012239 | Msa0016900:intron | 35.0% | |
| ACAATTAAACGTGGAGAAGT+GGG | - | chr1_1:28012348-28012367 | None:intergenic | 35.0% | |
| !! | TTTTTGGTCTAGTAACCTAG+TGG | - | chr1_1:28012382-28012401 | None:intergenic | 35.0% |
| AAAATAATACACAACCCGAC+AGG | - | chr1_1:28012494-28012513 | None:intergenic | 35.0% | |
| ! | AAATAGACGTACGGTACTTT+TGG | + | chr1_1:28012559-28012578 | Msa0016900:intron | 35.0% |
| ! | CTTTAGGTTTCAATTGGAAG+AGG | - | chr1_1:28012718-28012737 | None:intergenic | 35.0% |
| TCCAATTGAAACCTAAAGCT+TGG | + | chr1_1:28012720-28012739 | Msa0016900:intron | 35.0% | |
| !! | ACCAAGCTTTAGGTTTCAAT+TGG | - | chr1_1:28012724-28012743 | None:intergenic | 35.0% |
| CTATTGAATTCAAGCTCAAC+TGG | + | chr1_1:28012772-28012791 | Msa0016900:intron | 35.0% | |
| TTAATTCCACAATGCACACA+TGG | - | chr1_1:28012854-28012873 | None:intergenic | 35.0% | |
| TGTGTGCATTGTGGAATTAA+TGG | + | chr1_1:28012854-28012873 | Msa0016900:intron | 35.0% | |
| TTCAATAGATTCCCTCTACT+TGG | + | chr1_1:28012906-28012925 | Msa0016900:intron | 35.0% | |
| TCAATAGATTCCCTCTACTT+GGG | + | chr1_1:28012907-28012926 | Msa0016900:intron | 35.0% | |
| ATATGATTTCCCCAAGTAGA+GGG | - | chr1_1:28012920-28012939 | None:intergenic | 35.0% | |
| AATATGATTTCCCCAAGTAG+AGG | - | chr1_1:28012921-28012940 | None:intergenic | 35.0% | |
| GGGGAAATCATATTCAAAGT+AGG | + | chr1_1:28012927-28012946 | Msa0016900:intron | 35.0% | |
| CAAACTAAACCGCCTATAAT+TGG | + | chr1_1:28013396-28013415 | Msa0016900:intron | 35.0% | |
| TGATCTGTTCCAATTATAGG+CGG | - | chr1_1:28013408-28013427 | None:intergenic | 35.0% | |
| GTCTGATCTGTTCCAATTAT+AGG | - | chr1_1:28013411-28013430 | None:intergenic | 35.0% | |
| !! | AATCATACCATGGGTTTTGA+TGG | + | chr1_1:28013518-28013537 | Msa0016900:intron | 35.0% |
| ! | GCAGATAAGTTGGCTAATAT+GGG | + | chr1_1:28013989-28014008 | Msa0016900:intron | 35.0% |
| !!! | GTGTGGTCCTTGATTTTTTT+AGG | + | chr1_1:28014056-28014075 | Msa0016900:intron | 35.0% |
| AATCAAGGGAATCGGTAATT+CGG | - | chr1_1:28014097-28014116 | None:intergenic | 35.0% | |
| GAAAAACCAATCAAGGGAAT+CGG | - | chr1_1:28014105-28014124 | None:intergenic | 35.0% | |
| !!! | GATTCCCTTGATTGGTTTTT+CGG | + | chr1_1:28014104-28014123 | Msa0016900:intron | 35.0% |
| !!! | ATTCCCTTGATTGGTTTTTC+GGG | + | chr1_1:28014105-28014124 | Msa0016900:intron | 35.0% |
| !!! | TGGTTTTTTGTTGAGGGTTT+TGG | + | chr1_1:28014166-28014185 | Msa0016900:intron | 35.0% |
| ! | TTTTTGATAAGCAAGGAGTG+TGG | - | chr1_1:28014324-28014343 | None:intergenic | 35.0% |
| GAAACTAAACTTTGGCGTAA+AGG | + | chr1_1:28004882-28004901 | Msa0016900:CDS | 35.0% | |
| !! | CATAGTATTGGCTTCTCATA+CGG | - | chr1_1:28004909-28004928 | None:intergenic | 35.0% |
| ! | TGATTTTGTTGGGATGTCTT+TGG | - | chr1_1:28004984-28005003 | None:intergenic | 35.0% |
| !! | GGTCTGATAACTGATTTTGT+TGG | - | chr1_1:28004995-28005014 | None:intergenic | 35.0% |
| ! | GAATTGTATTGATGGGGATT+AGG | + | chr1_1:28005314-28005333 | Msa0016900:intron | 35.0% |
| GATTGTGAAGAATCAAATGG+AGG | + | chr1_1:28005498-28005517 | Msa0016900:CDS | 35.0% | |
| TGTATACCAAGCAATGAGAT+AGG | + | chr1_1:28005616-28005635 | Msa0016900:CDS | 35.0% | |
| CCACAAGCGTTACATAGTAT+TGG | - | chr1_1:28004921-28004940 | None:intergenic | 40.0% | |
| CCAATACTATGTAACGCTTG+TGG | + | chr1_1:28004918-28004937 | Msa0016900:CDS | 40.0% | |
| GGACTACATTTCAAGGCTAA+AGG | + | chr1_1:28004939-28004958 | Msa0016900:CDS | 40.0% | |
| ATCAGACCTTGACGTTGAAA+AGG | + | chr1_1:28005007-28005026 | Msa0016900:CDS | 40.0% | |
| ! | CAGATTCCTTTTCAACGTCA+AGG | - | chr1_1:28005016-28005035 | None:intergenic | 40.0% |
| !! | TGGAGATTGGTTTGAAAGCT+CGG | - | chr1_1:28005048-28005067 | None:intergenic | 40.0% |
| AGCATTCATTTGAGTAGACC+CGG | + | chr1_1:28005276-28005295 | Msa0016900:intron | 40.0% | |
| ATTTGAGTAGACCCGGTATT+AGG | + | chr1_1:28005283-28005302 | Msa0016900:intron | 40.0% | |
| !! | TTTTGAAGGAGAGAGTGGTT+AGG | + | chr1_1:28005884-28005903 | Msa0016900:intron | 40.0% |
| AATTTCGTGTATTCGGAGAC+TGG | + | chr1_1:28006133-28006152 | Msa0016900:intron | 40.0% | |
| ! | GTGTTGCATTTTGAATAGGG+AGG | - | chr1_1:28006180-28006199 | None:intergenic | 40.0% |
| TAAACATACCCTAGAGACTG+AGG | + | chr1_1:28006230-28006249 | Msa0016900:intron | 40.0% | |
| TCAAGAGATAGGCAAGCAAT+AGG | - | chr1_1:28006283-28006302 | None:intergenic | 40.0% | |
| ! | TCAAGGTACCCAAACTAAAG+AGG | + | chr1_1:28006954-28006973 | Msa0016900:intron | 40.0% |
| ACAACTGGGGAAAAACCAAT+TGG | + | chr1_1:28007016-28007035 | Msa0016900:CDS | 40.0% | |
| ACTTGCTTCAATCCTCCAAT+TGG | - | chr1_1:28007034-28007053 | None:intergenic | 40.0% | |
| ATTGAAGCAAGTTCCACAAG+AGG | + | chr1_1:28007042-28007061 | Msa0016900:CDS | 40.0% | |
| !! | CATCCATGAAGTTGACTTGT+CGG | - | chr1_1:28007072-28007091 | None:intergenic | 40.0% |
| ACAAGTCAACTTCATGGATG+AGG | + | chr1_1:28007072-28007091 | Msa0016900:CDS | 40.0% | |
| CAAGACTTATGCATGAGAGT+AGG | - | chr1_1:28007178-28007197 | None:intergenic | 40.0% | |
| CTACTCTCATGCATAAGTCT+TGG | + | chr1_1:28007176-28007195 | Msa0016900:CDS | 40.0% | |
| ! | CAGATGCGAGTTATTTCGAA+AGG | - | chr1_1:28007208-28007227 | None:intergenic | 40.0% |
| GAACAATCGTGTTGTGATCA+AGG | + | chr1_1:28007231-28007250 | Msa0016900:intron | 40.0% | |
| CAAGGATCAAACTAGATGGT+TGG | + | chr1_1:28007249-28007268 | Msa0016900:intron | 40.0% | |
| TGTGCATGACTTCCTCAATT+GGG | - | chr1_1:28007282-28007301 | None:intergenic | 40.0% | |
| ATGTGCATGACTTCCTCAAT+TGG | - | chr1_1:28007283-28007302 | None:intergenic | 40.0% | |
| !! | CAAAAGAAGCACTAGATAGG+AGG | + | chr1_1:28007448-28007467 | Msa0016900:intron | 40.0% |
| !! | ACGTTAAACAAGCGCTGAAT+GGG | + | chr1_1:28007496-28007515 | Msa0016900:intron | 40.0% |
| !! | CAAGAGCATGATACTTTTCG+GGG | + | chr1_1:28007786-28007805 | Msa0016900:intron | 40.0% |
| !! | TATTTGGCTCTGAATCTCAC+CGG | - | chr1_1:28007864-28007883 | None:intergenic | 40.0% |
| AACCGATCGTCTGTAAAGAA+CGG | - | chr1_1:28008001-28008020 | None:intergenic | 40.0% | |
| TTCTTTACAGACGATCGGTT+AGG | + | chr1_1:28008001-28008020 | Msa0016900:intron | 40.0% | |
| ! | CACACGAGGCAATTTTTGAT+TGG | + | chr1_1:28008032-28008051 | Msa0016900:intron | 40.0% |
| GCACTCTATATGATCTCACT+TGG | + | chr1_1:28008181-28008200 | Msa0016900:intron | 40.0% | |
| GATCTCACTTGGAGTTAGAT+AGG | + | chr1_1:28008192-28008211 | Msa0016900:intron | 40.0% | |
| ! | CTAAGTTTGAGGTTGCTCTT+TGG | + | chr1_1:28008243-28008262 | Msa0016900:intron | 40.0% |
| !!! | CAACATTTTGAGTTTGGGGT+GGG | + | chr1_1:28008272-28008291 | Msa0016900:intron | 40.0% |
| !!! | AACATTTTGAGTTTGGGGTG+GGG | + | chr1_1:28008273-28008292 | Msa0016900:intron | 40.0% |
| GGAGTTAGTTCACTAACCTA+GGG | - | chr1_1:28008522-28008541 | None:intergenic | 40.0% | |
| TGGAGTTAGTTCACTAACCT+AGG | - | chr1_1:28008523-28008542 | None:intergenic | 40.0% | |
| TGAGGGTTATAACTTGGCTT+AGG | - | chr1_1:28008590-28008609 | None:intergenic | 40.0% | |
| TGTATCTCGTAAAGCCAGTA+GGG | - | chr1_1:28008725-28008744 | None:intergenic | 40.0% | |
| ATGTATCTCGTAAAGCCAGT+AGG | - | chr1_1:28008726-28008745 | None:intergenic | 40.0% | |
| TGATTCCTAAGCACAACTCT+CGG | + | chr1_1:28008813-28008832 | Msa0016900:intron | 40.0% | |
| ! | TCCCGGAACATAGCAATTTT+AGG | + | chr1_1:28009065-28009084 | Msa0016900:intron | 40.0% |
| CCCTAAAATTGCTATGTTCC+GGG | - | chr1_1:28009069-28009088 | None:intergenic | 40.0% | |
| ! | CCCGGAACATAGCAATTTTA+GGG | + | chr1_1:28009066-28009085 | Msa0016900:intron | 40.0% |
| ! | CTAGGCATTTTTCATGTGCT+AGG | - | chr1_1:28009166-28009185 | None:intergenic | 40.0% |
| CTAGCACATGAAAAATGCCT+AGG | + | chr1_1:28009164-28009183 | Msa0016900:intron | 40.0% | |
| AGTCGTATGGAAAATGCTCT+AGG | - | chr1_1:28009213-28009232 | None:intergenic | 40.0% | |
| !! | AGAGCATTTTCCATACGACT+AGG | + | chr1_1:28009213-28009232 | Msa0016900:intron | 40.0% |
| ! | GAGCATTTTCCATACGACTA+GGG | + | chr1_1:28009214-28009233 | Msa0016900:intron | 40.0% |
| CAAATCATTCCCTAGTCGTA+TGG | - | chr1_1:28009226-28009245 | None:intergenic | 40.0% | |
| CGAGAAATTCTGAATGAGGA+AGG | - | chr1_1:28009397-28009416 | None:intergenic | 40.0% | |
| ! | TTAGGTACTTAGGTTGTGAC+AGG | + | chr1_1:28009679-28009698 | Msa0016900:intron | 40.0% |
| ! | TAGGTACTTAGGTTGTGACA+GGG | + | chr1_1:28009680-28009699 | Msa0016900:intron | 40.0% |
| TGAGTCTTGGAGCAAAAGAA+AGG | + | chr1_1:28009958-28009977 | Msa0016900:intron | 40.0% | |
| GAGTCTTGGAGCAAAAGAAA+GGG | + | chr1_1:28009959-28009978 | Msa0016900:intron | 40.0% | |
| TGGAGCAAAAGAAAGGGATT+CGG | + | chr1_1:28009965-28009984 | Msa0016900:intron | 40.0% | |
| GCAAAAGTGATCCTAAAGGT+TGG | - | chr1_1:28010090-28010109 | None:intergenic | 40.0% | |
| AGCAGCAAAAGTGATCCTAA+AGG | - | chr1_1:28010094-28010113 | None:intergenic | 40.0% | |
| AAACTAATAGGGAGCTTGTC+CGG | - | chr1_1:28010127-28010146 | None:intergenic | 40.0% | |
| TGAGTAGACTCTTCTTGTCT+TGG | + | chr1_1:28010355-28010374 | Msa0016900:intron | 40.0% | |
| GAGTAGACTCTTCTTGTCTT+GGG | + | chr1_1:28010356-28010375 | Msa0016900:intron | 40.0% | |
| TCTTCTTGTCTTGGGATTGT+TGG | + | chr1_1:28010364-28010383 | Msa0016900:intron | 40.0% | |
| ! | GTTCAAGGCTTGGTTTGATT+AGG | - | chr1_1:28010409-28010428 | None:intergenic | 40.0% |
| ATCAACCATGAAAATAGGCG+TGG | + | chr1_1:28010677-28010696 | Msa0016900:intron | 40.0% | |
| TTGAATTCATAGCTCCCTGT+CGG | + | chr1_1:28010934-28010953 | Msa0016900:intron | 40.0% | |
| TACTAGGGTCAAATCGCTTT+CGG | - | chr1_1:28011020-28011039 | None:intergenic | 40.0% | |
| CTCCTAAGTTCTTGCTACTA+GGG | - | chr1_1:28011035-28011054 | None:intergenic | 40.0% | |
| TCTCCTAAGTTCTTGCTACT+AGG | - | chr1_1:28011036-28011055 | None:intergenic | 40.0% | |
| AACCATTCTCTTCAACCCTT+AGG | + | chr1_1:28011152-28011171 | Msa0016900:intron | 40.0% | |
| TACCTAAGGGTTGAAGAGAA+TGG | - | chr1_1:28011157-28011176 | None:intergenic | 40.0% | |
| !! | CACGTACTAGTTCTACCTAA+GGG | - | chr1_1:28011170-28011189 | None:intergenic | 40.0% |
| AGTGTCCGAAGATTCATAGA+TGG | + | chr1_1:28011209-28011228 | Msa0016900:intron | 40.0% | |
| GTGTCCGAAGATTCATAGAT+GGG | + | chr1_1:28011210-28011229 | Msa0016900:intron | 40.0% | |
| TCTGCCCATCTATGAATCTT+CGG | - | chr1_1:28011217-28011236 | None:intergenic | 40.0% | |
| TCATAGATGGGCAGATCTAT+AGG | + | chr1_1:28011222-28011241 | Msa0016900:intron | 40.0% | |
| AAGATTTCCCAAGGCAATGA+AGG | - | chr1_1:28011256-28011275 | None:intergenic | 40.0% | |
| TTCATTGCCTTGGGAAATCT+TGG | + | chr1_1:28011255-28011274 | Msa0016900:intron | 40.0% | |
| ACAAGGTGATCCTTACGTAT+GGG | - | chr1_1:28011329-28011348 | None:intergenic | 40.0% | |
| GGTAGACTATACAAGTGATG+AGG | - | chr1_1:28011401-28011420 | None:intergenic | 40.0% | |
| TGCAGATAGTCCTTATGCAT+AGG | + | chr1_1:28012006-28012025 | Msa0016900:intron | 40.0% | |
| GAGTGTTTAGCCTATGCATA+AGG | - | chr1_1:28012019-28012038 | None:intergenic | 40.0% | |
| TACAAGTGGCACTTGTCTAT+TGG | + | chr1_1:28012057-28012076 | Msa0016900:intron | 40.0% | |
| !! | TGGCACTTGTCTATTGGTTT+CGG | + | chr1_1:28012063-28012082 | Msa0016900:intron | 40.0% |
| ! | CAATGTGGCCAACCTTTTTA+TGG | + | chr1_1:28012086-28012105 | Msa0016900:intron | 40.0% |
| CATAATTTATGCAGAAGCCG+AGG | + | chr1_1:28012306-28012325 | Msa0016900:intron | 40.0% | |
| CAATTAAACGTGGAGAAGTG+GGG | - | chr1_1:28012347-28012366 | None:intergenic | 40.0% | |
| CACAATTAAACGTGGAGAAG+TGG | - | chr1_1:28012349-28012368 | None:intergenic | 40.0% | |
| AGAGCTGACACAATTAAACG+TGG | - | chr1_1:28012357-28012376 | None:intergenic | 40.0% | |
| !!! | CATTTGTTTTTTCCGCCTGT+CGG | + | chr1_1:28012476-28012495 | Msa0016900:intron | 40.0% |
| !!! | ATTTGTTTTTTCCGCCTGTC+GGG | + | chr1_1:28012477-28012496 | Msa0016900:intron | 40.0% |
| AAGCCGATAAACCAAGCTTT+AGG | - | chr1_1:28012734-28012753 | None:intergenic | 40.0% | |
| CAATAGATTCCCTCTACTTG+GGG | + | chr1_1:28012908-28012927 | Msa0016900:intron | 40.0% | |
| TCTGTAAAAACCGCTCTGAT+TGG | + | chr1_1:28013048-28013067 | Msa0016900:intron | 40.0% | |
| !! | ATAGGCGGTTTAGTTTGTAC+CGG | - | chr1_1:28013393-28013412 | None:intergenic | 40.0% |
| ACTCGTGGTTCAATTCAGAT+TGG | - | chr1_1:28013452-28013471 | None:intergenic | 40.0% | |
| ! | TATGGTTGGTTAGGCATTTG+AGG | - | chr1_1:28013791-28013810 | None:intergenic | 40.0% |
| CAACGGTTCCGTAACATAAT+AGG | - | chr1_1:28013902-28013921 | None:intergenic | 40.0% | |
| CTATTATGTTACGGAACCGT+TGG | + | chr1_1:28013900-28013919 | Msa0016900:intron | 40.0% | |
| AAACAGTTGCGCAGATAAGT+TGG | + | chr1_1:28013979-28013998 | Msa0016900:intron | 40.0% | |
| ! | CGCAGATAAGTTGGCTAATA+TGG | + | chr1_1:28013988-28014007 | Msa0016900:intron | 40.0% |
| !! | GAATTACCGATTCCCTTGAT+TGG | + | chr1_1:28014096-28014115 | Msa0016900:intron | 40.0% |
| !!! | TTCCCTTGATTGGTTTTTCG+GGG | + | chr1_1:28014106-28014125 | Msa0016900:intron | 40.0% |
| CCACAAGCGTTACATAGTAT+TGG | - | chr1_1:28004921-28004940 | None:intergenic | 40.0% | |
| CCAATACTATGTAACGCTTG+TGG | + | chr1_1:28004918-28004937 | Msa0016900:CDS | 40.0% | |
| GGACTACATTTCAAGGCTAA+AGG | + | chr1_1:28004939-28004958 | Msa0016900:CDS | 40.0% | |
| ATCAGACCTTGACGTTGAAA+AGG | + | chr1_1:28005007-28005026 | Msa0016900:CDS | 40.0% | |
| ! | CAGATTCCTTTTCAACGTCA+AGG | - | chr1_1:28005016-28005035 | None:intergenic | 40.0% |
| !! | TGGAGTTTGGTTTGAAAGCT+CGG | - | chr1_1:28014584-28014603 | None:intergenic | 40.0% |
| AGCATTCATTTGCGTAGACA+CGG | + | chr1_1:28014792-28014811 | Msa0016900:intron | 40.0% | |
| ATTTGCGTAGACACGGTATT+AGG | + | chr1_1:28014799-28014818 | Msa0016900:intron | 40.0% | |
| TCGTACACGGTACATATCAA+TGG | - | chr1_1:28015018-28015037 | None:intergenic | 40.0% | |
| ! | CGCTTGTGGACTACATTTCA+AGG | + | chr1_1:28004932-28004951 | Msa0016900:CDS | 45.0% |
| !! | GGAGATTGGTTTGAAAGCTC+GGG | - | chr1_1:28005047-28005066 | None:intergenic | 45.0% |
| GAGCTTTCAAACCAATCTCC+AGG | + | chr1_1:28005047-28005066 | Msa0016900:CDS | 45.0% | |
| CCAATGCCTATCTCATTGCT+TGG | - | chr1_1:28005625-28005644 | None:intergenic | 45.0% | |
| CCAAGCAATGAGATAGGCAT+TGG | + | chr1_1:28005622-28005641 | Msa0016900:CDS | 45.0% | |
| ATCCTCAACCTCAGTCTCTA+GGG | - | chr1_1:28006241-28006260 | None:intergenic | 45.0% | |
| TATCCTCAACCTCAGTCTCT+AGG | - | chr1_1:28006242-28006261 | None:intergenic | 45.0% | |
| GCAAGCAATAGGAGCCTTAA+GGG | - | chr1_1:28006272-28006291 | None:intergenic | 45.0% | |
| !! | GAGTGGGGTTAGTTCCTAAA+TGG | - | chr1_1:28006519-28006538 | None:intergenic | 45.0% |
| ACTGGGGAAAAACCAATTGG+AGG | + | chr1_1:28007019-28007038 | Msa0016900:CDS | 45.0% | |
| GATCCGACAAGTCAACTTCA+TGG | + | chr1_1:28007066-28007085 | Msa0016900:CDS | 45.0% | |
| GACTTATGCATGAGAGTAGG+TGG | - | chr1_1:28007175-28007194 | None:intergenic | 45.0% | |
| ! | TCAAACTAGATGGTTGGCCA+AGG | + | chr1_1:28007255-28007274 | Msa0016900:intron | 45.0% |
| GGTTCATCCCTTGTACTACT+TGG | - | chr1_1:28007325-28007344 | None:intergenic | 45.0% | |
| !! | GACGTTAAACAAGCGCTGAA+TGG | + | chr1_1:28007495-28007514 | Msa0016900:intron | 45.0% |
| GGCTCAAAGTGGTTTCACAA+AGG | - | chr1_1:28008100-28008119 | None:intergenic | 45.0% | |
| TTTCGTCTAGAGGCTCAAAG+TGG | - | chr1_1:28008111-28008130 | None:intergenic | 45.0% | |
| !!! | GCAACATTTTGAGTTTGGGG+TGG | + | chr1_1:28008271-28008290 | Msa0016900:intron | 45.0% |
| AACTTGGCTTAGGTTAAGGG+TGG | - | chr1_1:28008580-28008599 | None:intergenic | 45.0% | |
| ACGTACATTCATGTCACGAC+TGG | + | chr1_1:28008677-28008696 | Msa0016900:intron | 45.0% | |
| ATTCATGTCACGACTGGAGT+GGG | + | chr1_1:28008683-28008702 | Msa0016900:intron | 45.0% | |
| ! | AGGCATTTTTCCCATGTGCT+AGG | - | chr1_1:28009146-28009165 | None:intergenic | 45.0% |
| CATGAAAAATGCCTAGGGCA+TGG | + | chr1_1:28009170-28009189 | Msa0016900:intron | 45.0% | |
| GTATGTGAATTCCATGCCCT+AGG | - | chr1_1:28009184-28009203 | None:intergenic | 45.0% | |
| ! | CGACTAGGGAATGATTTGTG+AGG | + | chr1_1:28009228-28009247 | Msa0016900:intron | 45.0% |
| TAGAACTGTGGCAGTTCAAG+AGG | + | chr1_1:28009419-28009438 | Msa0016900:intron | 45.0% | |
| GTTCAAGAGGAAGGCAACTT+TGG | + | chr1_1:28009432-28009451 | Msa0016900:intron | 45.0% | |
| AGTGATCCTAAAGGTTGGCA+CGG | - | chr1_1:28010085-28010104 | None:intergenic | 45.0% | |
| !!! | TTTGCTGCTTTTCTGCTTCC+CGG | + | chr1_1:28010105-28010124 | Msa0016900:intron | 45.0% |
| AACTAATAGGGAGCTTGTCC+GGG | - | chr1_1:28010126-28010145 | None:intergenic | 45.0% | |
| ! | AGCAACCACGCCTATTTTCA+TGG | - | chr1_1:28010685-28010704 | None:intergenic | 45.0% |
| AGAAGGGTTTGTCACCATGA+CGG | + | chr1_1:28010811-28010830 | Msa0016900:intron | 45.0% | |
| TTGGGATTATTGGTCCGTCA+TGG | - | chr1_1:28010828-28010847 | None:intergenic | 45.0% | |
| !! | ATGACGGACCAATAATCCCA+AGG | + | chr1_1:28010827-28010846 | Msa0016900:intron | 45.0% |
| !! | AAAAGGGTATCGTTCCGACA+GGG | - | chr1_1:28010951-28010970 | None:intergenic | 45.0% |
| !! | AAAAAGGGTATCGTTCCGAC+AGG | - | chr1_1:28010952-28010971 | None:intergenic | 45.0% |
| GAGATAAAACCGCAAGTGCA+CGG | - | chr1_1:28010990-28011009 | None:intergenic | 45.0% | |
| GACCCTAGTAGCAAGAACTT+AGG | + | chr1_1:28011030-28011049 | Msa0016900:intron | 45.0% | |
| GTAGAGAAAACAAGCGACTC+CGG | + | chr1_1:28011113-28011132 | Msa0016900:intron | 45.0% | |
| TAGAGAAAACAAGCGACTCC+GGG | + | chr1_1:28011114-28011133 | Msa0016900:intron | 45.0% | |
| !! | GCACGTACTAGTTCTACCTA+AGG | - | chr1_1:28011171-28011190 | None:intergenic | 45.0% |
| TGGCTTTCCAAGATTTCCCA+AGG | - | chr1_1:28011265-28011284 | None:intergenic | 45.0% | |
| CAAGGTGATCCTTACGTATG+GGG | - | chr1_1:28011328-28011347 | None:intergenic | 45.0% | |
| CACAAGGTGATCCTTACGTA+TGG | - | chr1_1:28011330-28011349 | None:intergenic | 45.0% | |
| ACGTGACTAACCTAGAAGGT+TGG | - | chr1_1:28011370-28011389 | None:intergenic | 45.0% | |
| ATACAAGTGATGAGGCCGTT+GGG | - | chr1_1:28011393-28011412 | None:intergenic | 45.0% | |
| TATACAAGTGATGAGGCCGT+TGG | - | chr1_1:28011394-28011413 | None:intergenic | 45.0% | |
| CAGAAAGGTAAGCAGCGTTT+AGG | - | chr1_1:28011493-28011512 | None:intergenic | 45.0% | |
| GGACGAAACGACAATCATTG+TGG | + | chr1_1:28011625-28011644 | Msa0016900:intron | 45.0% | |
| TGGTGGAAGGTCTTTGATGT+GGG | - | chr1_1:28011729-28011748 | None:intergenic | 45.0% | |
| !! | AAGTAAGGGCATTAAGGTGG+TGG | - | chr1_1:28011746-28011765 | None:intergenic | 45.0% |
| !! | CCTAAGTAAGGGCATTAAGG+TGG | - | chr1_1:28011749-28011768 | None:intergenic | 45.0% |
| CCACCTTAATGCCCTTACTT+AGG | + | chr1_1:28011746-28011765 | Msa0016900:intron | 45.0% | |
| TAGGCTAAACACTCGGCAAA+TGG | + | chr1_1:28012025-28012044 | Msa0016900:intron | 45.0% | |
| !! | GTCTATTGGTTTCGGCAATG+TGG | + | chr1_1:28012071-28012090 | Msa0016900:intron | 45.0% |
| TACCAACTGAGCTAAGCTCA+CGG | - | chr1_1:28012277-28012296 | None:intergenic | 45.0% | |
| ! | TGAGCTTAGCTCAGTTGGTA+GGG | + | chr1_1:28012277-28012296 | Msa0016900:intron | 45.0% |
| ATAATACACAACCCGACAGG+CGG | - | chr1_1:28012491-28012510 | None:intergenic | 45.0% | |
| AGGGATGATCACAACCAAAC+TGG | + | chr1_1:28012947-28012966 | Msa0016900:intron | 45.0% | |
| CATACACGATCCAATCAGAG+CGG | - | chr1_1:28013061-28013080 | None:intergenic | 45.0% | |
| GATGTCGAGCATTATGCCAA+CGG | - | chr1_1:28013919-28013938 | None:intergenic | 45.0% | |
| TGGCATAATGCTCGACATCT+TGG | + | chr1_1:28013920-28013939 | Msa0016900:intron | 45.0% | |
| !! | GGGAAGAGTGTCTAACCAAA+CGG | - | chr1_1:28014032-28014051 | None:intergenic | 45.0% |
| GACCCCGAAAAACCAATCAA+GGG | - | chr1_1:28014111-28014130 | None:intergenic | 45.0% | |
| AGACCCCGAAAAACCAATCA+AGG | - | chr1_1:28014112-28014131 | None:intergenic | 45.0% | |
| !!! | TTTTTTGAGTGTGGCGGCAT+AGG | + | chr1_1:28014238-28014257 | Msa0016900:intron | 45.0% |
| GTATCATCGACATCCCAACT+AGG | - | chr1_1:28014287-28014306 | None:intergenic | 45.0% | |
| GAGTGTGGACAAACATCAAG+CGG | - | chr1_1:28014309-28014328 | None:intergenic | 45.0% | |
| ! | CGCTTGTGGACTACATTTCA+AGG | + | chr1_1:28004932-28004951 | Msa0016900:CDS | 45.0% |
| !! | GGAGTTTGGTTTGAAAGCTC+GGG | - | chr1_1:28014583-28014602 | None:intergenic | 45.0% |
| GAGCTTTCAAACCAAACTCC+AGG | + | chr1_1:28014583-28014602 | Msa0016900:CDS | 45.0% | |
| ACCAAGCAATGAGATAGGCT+TGG | + | chr1_1:28015205-28015224 | Msa0016900:CDS | 45.0% | |
| TCCAAGCCTATCTCATTGCT+TGG | - | chr1_1:28015209-28015228 | None:intergenic | 45.0% | |
| !!! | TTTTTTATTTTTTTAAATTG+AGG | - | chr1_1:28006038-28006057 | None:intergenic | 5.0% |
| !! | AAATATTGAAAATTAAATAA+TGG | - | chr1_1:28007529-28007548 | None:intergenic | 5.0% |
| !! | AAAATAAATTTAAGTATAAA+AGG | - | chr1_1:28007711-28007730 | None:intergenic | 5.0% |
| !!! | ATAATTTATATTTTTCAAAA+TGG | - | chr1_1:28012121-28012140 | None:intergenic | 5.0% |
| !! | AAAAAAATTATTAAAAAAAG+GGG | - | chr1_1:28014223-28014242 | None:intergenic | 5.0% |
| !! | CAAAAAAAATTATTAAAAAA+AGG | - | chr1_1:28014225-28014244 | None:intergenic | 5.0% |
| !! | TAGGGAGGTTGATGAAGTCG+AGG | - | chr1_1:28006165-28006184 | None:intergenic | 50.0% |
| TACCCTAGAGACTGAGGTTG+AGG | + | chr1_1:28006236-28006255 | Msa0016900:intron | 50.0% | |
| GAGGATAGACTCCTCCCTTA+AGG | + | chr1_1:28006255-28006274 | Msa0016900:intron | 50.0% | |
| AGCAATAGGAGCCTTAAGGG+AGG | - | chr1_1:28006269-28006288 | None:intergenic | 50.0% | |
| GGCAAGCAATAGGAGCCTTA+AGG | - | chr1_1:28006273-28006292 | None:intergenic | 50.0% | |
| ACTTGTCGGATCTCCTCTTG+TGG | - | chr1_1:28007058-28007077 | None:intergenic | 50.0% | |
| GACTTCCTCAATTGGGACCT+TGG | - | chr1_1:28007275-28007294 | None:intergenic | 50.0% | |
| AACACTTGGACATATCCGCC+AGG | + | chr1_1:28007367-28007386 | Msa0016900:intron | 50.0% | |
| ACACTTGGACATATCCGCCA+GGG | + | chr1_1:28007368-28007387 | Msa0016900:intron | 50.0% | |
| ACGCTAAACACGCGCTGAAT+AGG | + | chr1_1:28007396-28007415 | Msa0016900:intron | 50.0% | |
| CTAAACACGCGCTGAATAGG+AGG | + | chr1_1:28007399-28007418 | Msa0016900:intron | 50.0% | |
| GTTTAACGTCTGAGTCCCGA+CGG | - | chr1_1:28007485-28007504 | None:intergenic | 50.0% | |
| !!! | TTTTCGGGGCTTGCTAGTGA+AGG | + | chr1_1:28007800-28007819 | Msa0016900:intron | 50.0% |
| GGCCGTTCTTTACAGACGAT+CGG | + | chr1_1:28007996-28008015 | Msa0016900:intron | 50.0% | |
| AAGGTGGCTTCAAAGGCTCA+AGG | - | chr1_1:28008060-28008079 | None:intergenic | 50.0% | |
| CATTCATGTCACGACTGGAG+TGG | + | chr1_1:28008682-28008701 | Msa0016900:intron | 50.0% | |
| AATGTCGTGACCAACCCTAC+TGG | + | chr1_1:28008708-28008727 | Msa0016900:intron | 50.0% | |
| TCTCGTAAAGCCAGTAGGGT+TGG | - | chr1_1:28008721-28008740 | None:intergenic | 50.0% | |
| CCTTTCCGAGAGTTGTGCTT+AGG | - | chr1_1:28008821-28008840 | None:intergenic | 50.0% | |
| CCTAAGCACAACTCTCGGAA+AGG | + | chr1_1:28008818-28008837 | Msa0016900:intron | 50.0% | |
| ! | TGGAAAATGCTCTAGGCGCA+TGG | - | chr1_1:28009206-28009225 | None:intergenic | 50.0% |
| !! | GCCGTCCATTTTTGCATGCA+CGG | + | chr1_1:28009264-28009283 | Msa0016900:intron | 50.0% |
| CCCGTGCATGCAAAAATGGA+CGG | - | chr1_1:28009268-28009287 | None:intergenic | 50.0% | |
| !! | CCGTCCATTTTTGCATGCAC+GGG | + | chr1_1:28009265-28009284 | Msa0016900:intron | 50.0% |
| !! | CGTCCATTTTTGCATGCACG+GGG | + | chr1_1:28009266-28009285 | Msa0016900:intron | 50.0% |
| ACGGGGTGCATGCAAAAATG+CGG | + | chr1_1:28009283-28009302 | Msa0016900:intron | 50.0% | |
| GAGAGTTTCTACCTGGGTCT+GGG | - | chr1_1:28009360-28009379 | None:intergenic | 50.0% | |
| TGAGAGTTTCTACCTGGGTC+TGG | - | chr1_1:28009361-28009380 | None:intergenic | 50.0% | |
| ACTGTGGCAGTTCAAGAGGA+AGG | + | chr1_1:28009423-28009442 | Msa0016900:intron | 50.0% | |
| !! | GAAGGCAACTTTGGAGCTTC+CGG | + | chr1_1:28009441-28009460 | Msa0016900:intron | 50.0% |
| ! | AAGGGATTCGGAGCTGATTC+AGG | + | chr1_1:28009977-28009996 | Msa0016900:intron | 50.0% |
| AGAGAAAACAAGCGACTCCG+GGG | + | chr1_1:28011115-28011134 | Msa0016900:intron | 50.0% | |
| AGAACTAGTACGTGCGAGAG+AGG | + | chr1_1:28011176-28011195 | Msa0016900:intron | 50.0% | |
| GAACTAGTACGTGCGAGAGA+GGG | + | chr1_1:28011177-28011196 | Msa0016900:intron | 50.0% | |
| AACCTGTGCCTTCATTGCCT+TGG | + | chr1_1:28011245-28011264 | Msa0016900:intron | 50.0% | |
| ACCTGTGCCTTCATTGCCTT+GGG | + | chr1_1:28011246-28011265 | Msa0016900:intron | 50.0% | |
| ATGGGGTCTTACCGTCTCTA+AGG | - | chr1_1:28011311-28011330 | None:intergenic | 50.0% | |
| ACGGTAAGACCCCATACGTA+AGG | + | chr1_1:28011316-28011335 | Msa0016900:intron | 50.0% | |
| AGGATCACCTTGTGATCAGC+AGG | + | chr1_1:28011336-28011355 | Msa0016900:intron | 50.0% | |
| AACTGCACCTGCTGATCACA+AGG | - | chr1_1:28011346-28011365 | None:intergenic | 50.0% | |
| GGTGCAGTTTCCAACCTTCT+AGG | + | chr1_1:28011357-28011376 | Msa0016900:intron | 50.0% | |
| TGGGACGTGACTAACCTAGA+AGG | - | chr1_1:28011374-28011393 | None:intergenic | 50.0% | |
| ! | CTAGGTTAGTCACGTCCCAA+CGG | + | chr1_1:28011375-28011394 | Msa0016900:intron | 50.0% |
| ! | GTGGTGGAAGGTCTTTGATG+TGG | - | chr1_1:28011730-28011749 | None:intergenic | 50.0% |
| !! | AAGGGCATTAAGGTGGTGGA+AGG | - | chr1_1:28011742-28011761 | None:intergenic | 50.0% |
| GCTTGCGTTACAAATCTCGG+CGG | + | chr1_1:28011775-28011794 | Msa0016900:intron | 50.0% | |
| AGATAGGGGAAGTCATAGGG+AGG | + | chr1_1:28012223-28012242 | Msa0016900:intron | 50.0% | |
| ACCAACTGAGCTAAGCTCAC+GGG | - | chr1_1:28012276-28012295 | None:intergenic | 50.0% | |
| GTGAGCTTAGCTCAGTTGGT+AGG | + | chr1_1:28012276-28012295 | Msa0016900:intron | 50.0% | |
| ! | TTGTGTCAGCTCTAGCCACT+AGG | + | chr1_1:28012364-28012383 | Msa0016900:intron | 50.0% |
| CGCTCTGATTGGATCGTGTA+TGG | + | chr1_1:28013059-28013078 | Msa0016900:intron | 50.0% | |
| GTGGACACCATCAAAACCCA+TGG | - | chr1_1:28013528-28013547 | None:intergenic | 50.0% | |
| TGGAAACTAGCGAGCCATAG+TGG | + | chr1_1:28013582-28013601 | Msa0016900:intron | 50.0% | |
| ! | ACGCAATCACTAGTGCCGTT+TGG | + | chr1_1:28014014-28014033 | Msa0016900:intron | 50.0% |
| TTGGTTAGACACTCTTCCCG+CGG | + | chr1_1:28014033-28014052 | Msa0016900:intron | 50.0% | |
| AAAATCAAGGACCACACCCG+CGG | - | chr1_1:28014053-28014072 | None:intergenic | 50.0% | |
| CATCGACATCCCAACTAGGT+TGG | - | chr1_1:28014283-28014302 | None:intergenic | 50.0% | |
| !! | GGAGGTTGATGAAGTCGAGG+AGG | - | chr1_1:28006162-28006181 | None:intergenic | 55.0% |
| GTTGGCCAAGGTCCCAATTG+AGG | + | chr1_1:28007267-28007286 | Msa0016900:intron | 55.0% | |
| TTGGACATATCCGCCAGGGT+TGG | + | chr1_1:28007372-28007391 | Msa0016900:intron | 55.0% | |
| GTTTAGCGTTCCAACCCTGG+CGG | - | chr1_1:28007385-28007404 | None:intergenic | 55.0% | |
| CGTGTTTAGCGTTCCAACCC+TGG | - | chr1_1:28007388-28007407 | None:intergenic | 55.0% | |
| GGAGGCAACCTATTGACCGT+CGG | + | chr1_1:28007466-28007485 | Msa0016900:intron | 55.0% | |
| GAGGCAACCTATTGACCGTC+GGG | + | chr1_1:28007467-28007486 | Msa0016900:intron | 55.0% | |
| TCTGAGTCCCGACGGTCAAT+AGG | - | chr1_1:28007477-28007496 | None:intergenic | 55.0% | |
| TTTCCCATGTGCTAGGCGCA+TGG | - | chr1_1:28009139-28009158 | None:intergenic | 55.0% | |
| GCACCCCGTGCATGCAAAAA+TGG | - | chr1_1:28009272-28009291 | None:intergenic | 55.0% | |
| CGGGGTGCATGCAAAAATGC+GGG | + | chr1_1:28009284-28009303 | Msa0016900:intron | 55.0% | |
| GGGGTGCATGCAAAAATGCG+GGG | + | chr1_1:28009285-28009304 | Msa0016900:intron | 55.0% | |
| ! | TGGGTCTGGGCTAAAAGTGC+GGG | - | chr1_1:28009347-28009366 | None:intergenic | 55.0% |
| CTGGGTCTGGGCTAAAAGTG+CGG | - | chr1_1:28009348-28009367 | None:intergenic | 55.0% | |
| CATCCCCCAAGTCAGAGACT+TGG | + | chr1_1:28010033-28010052 | Msa0016900:intron | 55.0% | |
| !! | GTGCCAAGTCTCTGACTTGG+GGG | - | chr1_1:28010039-28010058 | None:intergenic | 55.0% |
| ! | CGTGCCAAGTCTCTGACTTG+GGG | - | chr1_1:28010040-28010059 | None:intergenic | 55.0% |
| CCGTGCCAAGTCTCTGACTT+GGG | - | chr1_1:28010041-28010060 | None:intergenic | 55.0% | |
| CCCAAGTCAGAGACTTGGCA+CGG | + | chr1_1:28010038-28010057 | Msa0016900:intron | 55.0% | |
| TCGGTAGAACCGTGCACTTG+CGG | + | chr1_1:28010978-28010997 | Msa0016900:intron | 55.0% | |
| ! | TCCCAAGGCAATGAAGGCAC+AGG | - | chr1_1:28011250-28011269 | None:intergenic | 55.0% |
| TAGGGGAAGTCATAGGGAGG+TGG | + | chr1_1:28012226-28012245 | Msa0016900:intron | 55.0% | |
| AGGGGAAGTCATAGGGAGGT+GGG | + | chr1_1:28012227-28012246 | Msa0016900:intron | 55.0% | |
| CCAACTGAGCTAAGCTCACG+GGG | - | chr1_1:28012275-28012294 | None:intergenic | 55.0% | |
| ATGCACACATGGACCCGTCA+TGG | - | chr1_1:28012843-28012862 | None:intergenic | 55.0% | |
| ACGGGTCCATGTGTGCATTG+TGG | + | chr1_1:28012845-28012864 | Msa0016900:intron | 55.0% | |
| TGGTTAGACACTCTTCCCGC+GGG | + | chr1_1:28014034-28014053 | Msa0016900:intron | 55.0% | |
| AAATCAAGGACCACACCCGC+GGG | - | chr1_1:28014052-28014071 | None:intergenic | 55.0% | |
| TTGAGTGTGGCGGCATAGGA+TGG | + | chr1_1:28014242-28014261 | Msa0016900:intron | 55.0% | |
| !! | GGCATAGGATGGAGGTGTCT+CGG | + | chr1_1:28014253-28014272 | Msa0016900:intron | 55.0% |
| !! | GCATAGGATGGAGGTGTCTC+GGG | + | chr1_1:28014254-28014273 | Msa0016900:intron | 55.0% |
| TCTCGGGATGCCAACCTAGT+TGG | + | chr1_1:28014270-28014289 | Msa0016900:intron | 55.0% | |
| CTCGGGATGCCAACCTAGTT+GGG | + | chr1_1:28014271-28014290 | Msa0016900:intron | 55.0% | |
| AGGCCATGCGCCTAGCACAT+GGG | + | chr1_1:28009133-28009152 | Msa0016900:intron | 60.0% | |
| ! | CGCACTTTTAGCCCAGACCC+AGG | + | chr1_1:28009346-28009365 | Msa0016900:intron | 60.0% |
| GCCGTGCCAAGTCTCTGACT+TGG | - | chr1_1:28010042-28010061 | None:intergenic | 60.0% | |
| TAAAGGTTGGCACGGCCGTG+TGG | - | chr1_1:28010077-28010096 | None:intergenic | 60.0% | |
| ACACGGCCGTGCCAACCTTT+AGG | + | chr1_1:28010076-28010095 | Msa0016900:intron | 60.0% | |
| GGGGAAGTCATAGGGAGGTG+GGG | + | chr1_1:28012228-28012247 | Msa0016900:intron | 60.0% | |
| CCCCGTGAGCTTAGCTCAGT+TGG | + | chr1_1:28012272-28012291 | Msa0016900:intron | 60.0% | |
| AGAAGCCGAGGTTCGAACCG+CGG | + | chr1_1:28012318-28012337 | Msa0016900:intron | 60.0% | |
| AGTGTGGCGGCATAGGATGG+AGG | + | chr1_1:28014245-28014264 | Msa0016900:intron | 60.0% | |
| GAGGCCATGCGCCTAGCACA+TGG | + | chr1_1:28009132-28009151 | Msa0016900:intron | 65.0% | |
| GGTGTCCGCGGTTCGAACCT+CGG | - | chr1_1:28012326-28012345 | None:intergenic | 65.0% | |
| ! | GTGGAGAAGTGGGGTGTCCG+CGG | - | chr1_1:28012338-28012357 | None:intergenic | 65.0% |
| AGACACTCTTCCCGCGGGTG+TGG | + | chr1_1:28014039-28014058 | Msa0016900:intron | 65.0% | |
| GGCCCGTGCCACCAGCCACA+CGG | + | chr1_1:28010059-28010078 | Msa0016900:intron | 75.0% | |
| GGCCGTGTGGCTGGTGGCAC+GGG | - | chr1_1:28010064-28010083 | None:intergenic | 75.0% | |
| CGGCCGTGTGGCTGGTGGCA+CGG | - | chr1_1:28010065-28010084 | None:intergenic | 75.0% | |
| TGGCACGGCCGTGTGGCTGG+TGG | - | chr1_1:28010070-28010089 | None:intergenic | 75.0% | |
| GGTTGGCACGGCCGTGTGGC+TGG | - | chr1_1:28010073-28010092 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_1 | gene | 28004870 | 28015241 | 28004870 | ID=Msa0016900;Name=Msa0016900 |
| chr1_1 | mRNA | 28004870 | 28015241 | 28004870 | ID=Msa0016900-mRNA-1;Parent=Msa0016900;Name=Msa0016900-mRNA-1;_AED=0.38;_eAED=0.39;_QI=0|0|0|1|0.5|0.4|5|0|325 |
| chr1_1 | exon | 28004870 | 28005068 | 28004870 | ID=Msa0016900-mRNA-1:exon:9400;Parent=Msa0016900-mRNA-1 |
| chr1_1 | exon | 28005485 | 28005666 | 28005485 | ID=Msa0016900-mRNA-1:exon:9401;Parent=Msa0016900-mRNA-1 |
| chr1_1 | exon | 28007001 | 28007238 | 28007001 | ID=Msa0016900-mRNA-1:exon:9402;Parent=Msa0016900-mRNA-1 |
| chr1_1 | exon | 28014419 | 28014604 | 28014419 | ID=Msa0016900-mRNA-1:exon:9403;Parent=Msa0016900-mRNA-1 |
| chr1_1 | exon | 28015069 | 28015241 | 28015069 | ID=Msa0016900-mRNA-1:exon:9404;Parent=Msa0016900-mRNA-1 |
| chr1_1 | CDS | 28004870 | 28005068 | 28004870 | ID=Msa0016900-mRNA-1:cds;Parent=Msa0016900-mRNA-1 |
| chr1_1 | CDS | 28005485 | 28005666 | 28005485 | ID=Msa0016900-mRNA-1:cds;Parent=Msa0016900-mRNA-1 |
| chr1_1 | CDS | 28007001 | 28007238 | 28007001 | ID=Msa0016900-mRNA-1:cds;Parent=Msa0016900-mRNA-1 |
| chr1_1 | CDS | 28014419 | 28014604 | 28014419 | ID=Msa0016900-mRNA-1:cds;Parent=Msa0016900-mRNA-1 |
| chr1_1 | CDS | 28015069 | 28015241 | 28015069 | ID=Msa0016900-mRNA-1:cds;Parent=Msa0016900-mRNA-1 |
| Gene Sequence |
| Protein sequence |
