AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0020240

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0020240 MtrunA17_Chr1g0171451 92.910 677 14 2 1 644 1 676 0.0 1285
Msa0020240 MtrunA17_Chr1g0179331 51.230 691 250 8 32 640 128 813 0.0 647
Msa0020240 MtrunA17_Chr5g0427651 39.658 701 310 11 35 640 222 904 1.01e-156 474
Msa0020240 MtrunA17_Chr3g0132791 50.355 282 107 1 392 640 630 911 1.47e-88 295
Msa0020240 MtrunA17_Chr3g0132791 39.935 308 160 6 19 321 179 466 7.39e-57 207
Msa0020240 MtrunA17_Chr8g0392871 46.885 305 120 5 371 639 696 994 7.25e-83 281
Msa0020240 MtrunA17_Chr8g0392871 32.028 281 166 6 40 310 102 367 4.88e-32 132
Msa0020240 MtrunA17_Chr1g0191171 49.818 275 100 3 402 640 676 948 7.97e-82 278
Msa0020240 MtrunA17_Chr1g0191171 35.664 286 146 8 41 308 88 353 1.89e-37 149
Msa0020240 MtrunA17_Chr6g0482711 48.727 275 103 3 407 645 652 924 8.25e-81 275
Msa0020240 MtrunA17_Chr6g0482711 32.740 281 164 6 40 310 101 366 1.21e-31 131
Msa0020240 MtrunA17_Chr1g0151541 48.746 279 105 3 399 641 647 923 7.94e-79 269
Msa0020240 MtrunA17_Chr1g0151541 33.333 258 155 4 42 290 82 331 1.36e-33 137
Msa0020240 MtrunA17_Chr2g0294351 47.253 273 109 2 400 639 451 721 1.44e-72 248
Msa0020240 MtrunA17_Chr4g0068411 46.269 268 107 3 397 629 440 705 1.39e-68 237
Msa0020240 MtrunA17_Chr5g0397931 41.353 266 121 2 409 641 417 680 8.06e-62 218
Msa0020240 MtrunA17_Chr4g0041201 39.925 268 126 3 403 639 535 798 7.91e-57 206
Msa0020240 MtrunA17_Chr2g0325851 39.245 265 126 3 403 636 545 805 5.21e-56 203
Msa0020240 MtrunA17_Chr5g0406251 36.154 260 136 5 409 639 289 547 3.40e-47 175
Msa0020240 MtrunA17_Chr3g0143531 32.734 278 154 5 394 639 1 277 1.72e-43 158
Msa0020240 MtrunA17_Chr1g0211611 35.271 258 119 4 420 639 306 553 4.89e-41 157
Msa0020240 MtrunA17_Chr4g0065211 33.829 269 130 7 421 644 1127 1392 3.41e-36 146
Msa0020240 MtrunA17_Chr2g0305141 33.459 266 129 7 421 641 1089 1351 9.17e-36 144
Msa0020240 MtrunA17_Chr4g0059121 31.481 270 148 4 404 638 47 314 1.13e-35 137
Msa0020240 MtrunA17_Chr4g0075541 30.241 291 150 4 390 638 64 343 1.66e-35 138
Msa0020240 MtrunA17_Chr1g0202101 33.852 257 135 7 407 632 275 527 9.10e-35 139
Msa0020240 MtrunA17_Chr2g0310781 33.088 272 133 8 417 643 848 1115 1.11e-33 138
Msa0020240 MtrunA17_Chr2g0310761 30.293 307 160 8 388 643 906 1209 1.12e-33 138
Msa0020240 MtrunA17_Chr4g0047191 30.435 276 153 4 401 639 30 303 1.27e-33 132
Msa0020240 MtrunA17_Chr4g0072741 32.593 270 134 8 421 645 841 1107 1.46e-33 137
Msa0020240 MtrunA17_Chr4g0047211 30.435 276 153 4 401 639 25 298 1.48e-33 131
Msa0020240 MtrunA17_Chr3g0117731 31.734 271 142 6 405 637 47 312 2.81e-33 131
Msa0020240 MtrunA17_Chr1g0196631 32.584 267 130 9 421 641 906 1168 9.30e-33 135
Msa0020240 MtrunA17_Chr2g0282321 33.818 275 135 5 406 639 152 420 1.07e-32 131
Msa0020240 MtrunA17_Chr6g0461841 32.955 264 129 7 421 639 973 1233 2.14e-32 134
Msa0020240 MtrunA17_Chr8g0357611 31.716 268 135 7 421 643 1376 1640 2.19e-32 134
Msa0020240 MtrunA17_Chr3g0090261 29.316 307 178 7 368 637 33 337 1.09e-31 126
Msa0020240 MtrunA17_Chr3g0117811 29.293 297 141 6 404 639 49 337 2.94e-30 122
Msa0020240 MtrunA17_Chr4g0059181 29.097 299 139 5 404 639 78 366 1.96e-29 120
Msa0020240 MtrunA17_Chr6g0450871 29.524 315 158 6 379 639 45 349 4.22e-29 119
Msa0020240 MtrunA17_Chr4g0047201 29.889 271 151 4 406 639 191 459 4.43e-29 121
Msa0020240 MtrunA17_Chr7g0244621 29.932 294 159 8 389 640 22 310 8.26e-29 118
Msa0020240 MtrunA17_Chr4g0042731 31.636 275 149 7 407 642 133 407 9.09e-28 116
Msa0020240 MtrunA17_Chr3g0136131 31.387 274 137 8 413 637 85 356 8.84e-27 112
Msa0020240 MtrunA17_Chr1g0205071 26.059 307 171 4 388 639 51 356 7.36e-26 110
Msa0020240 MtrunA17_Chr1g0157231 29.412 238 132 8 394 599 122 355 2.59e-24 105
Msa0020240 MtrunA17_Chr2g0284901 32.103 271 143 7 409 639 142 411 3.62e-24 106
Msa0020240 MtrunA17_Chr8g0380551 28.148 270 152 7 414 642 223 491 7.21e-24 105
Msa0020240 MtrunA17_Chr5g0443471 29.643 280 148 7 400 639 157 427 5.17e-23 102
Msa0020240 MtrunA17_Chr3g0137191 29.520 271 137 6 421 640 72 339 1.00e-22 100
Msa0020240 MtrunA17_Chr5g0394681 25.667 300 164 4 398 639 66 364 1.22e-22 100
Msa0020240 MtrunA17_Chr3g0116981 27.046 281 154 11 403 636 10 286 1.07e-20 94.4
Msa0020240 MtrunA17_Chr6g0449241 26.855 283 158 10 405 641 12 291 6.02e-20 92.0
Msa0020240 MtrunA17_Chr2g0299331 64.407 59 19 1 522 580 2 58 1.04e-18 80.5
Msa0020240 MtrunA17_Chr2g0317001 28.947 266 136 10 419 644 19 271 1.69e-18 89.7
Msa0020240 MtrunA17_Chr8g0388891 25.651 269 138 8 406 637 124 367 2.40e-18 87.8
Msa0020240 MtrunA17_Chr7g0215641 27.018 285 145 11 406 641 473 743 2.40e-17 86.3
Msa0020240 MtrunA17_Chr2g0297911 26.766 269 142 10 421 637 81 346 1.43e-16 82.4
Msa0020240 MtrunA17_Chr4g0038501 24.111 253 159 5 413 633 18 269 1.45e-16 84.3
Msa0020240 MtrunA17_Chr4g0044691 27.509 269 140 7 421 638 331 595 1.69e-16 83.6
Msa0020240 MtrunA17_Chr2g0297961 31.088 193 93 7 421 576 80 269 1.85e-16 82.0
Msa0020240 MtrunA17_Chr1g0171571 26.797 306 148 8 408 645 24 321 5.88e-16 81.6
Msa0020240 MtrunA17_Chr4g0038091 24.111 253 159 5 413 633 18 269 6.15e-16 82.0
Msa0020240 MtrunA17_Chr7g0215061 27.574 272 138 11 406 628 527 788 6.76e-16 81.6
Msa0020240 MtrunA17_Chr3g0105891 25.379 264 142 10 415 636 330 580 4.79e-15 78.6
Msa0020240 MtrunA17_Chr5g0441021 26.761 284 138 10 421 639 76 354 1.13e-14 76.6
Msa0020240 MtrunA17_Chr4g0048951 29.412 272 138 8 421 644 124 389 4.05e-14 75.1
Msa0020240 MtrunA17_Chr7g0215011 25.461 271 145 8 406 628 486 747 7.91e-14 75.1
Msa0020240 MtrunA17_Chr4g0042441 28.125 192 102 5 421 576 506 697 1.24e-13 74.3
Msa0020240 MtrunA17_Chr8g0379931 28.519 270 134 13 421 637 716 979 2.02e-13 73.9
Msa0020240 MtrunA17_Chr4g0001331 27.309 249 140 9 421 633 26 269 2.73e-13 72.4
Msa0020240 MtrunA17_Chr5g0416311 25.704 284 144 10 421 641 82 361 4.30e-13 71.6
Msa0020240 MtrunA17_Chr5g0431191 31.579 95 61 1 548 638 491 585 5.54e-13 72.0
Msa0020240 MtrunA17_Chr8g0358821 28.253 269 133 14 421 636 696 957 8.97e-13 71.6
Msa0020240 MtrunA17_Chr1g0165941 43.860 57 32 0 562 618 12 68 1.32e-12 63.5
Msa0020240 MtrunA17_Chr7g0251081 26.407 231 131 9 381 576 83 309 1.42e-12 70.1
Msa0020240 MtrunA17_Chr5g0432491 26.506 249 145 9 421 634 29 274 1.83e-12 69.7
Msa0020240 MtrunA17_Chr2g0288841 25.926 243 136 7 421 628 11 244 2.09e-12 69.7
Msa0020240 MtrunA17_Chr4g0048641 30.357 168 107 4 421 580 494 659 7.83e-12 68.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0020240 AT5G03730.2 53.223 667 237 10 37 643 161 812 0.0 624
Msa0020240 AT5G03730.1 53.223 667 237 10 37 643 161 812 0.0 624
Msa0020240 AT4G24480.3 50.719 278 104 1 396 640 650 927 3.89e-90 300
Msa0020240 AT4G24480.3 40.717 307 159 4 10 311 217 505 5.69e-59 214
Msa0020240 AT4G24480.2 50.719 278 104 1 396 640 650 927 4.34e-90 300
Msa0020240 AT4G24480.2 40.717 307 159 4 10 311 217 505 5.99e-59 214
Msa0020240 AT4G24480.1 49.823 283 104 2 396 640 650 932 8.59e-88 294
Msa0020240 AT4G24480.1 40.717 307 159 4 10 311 217 505 6.37e-59 214
Msa0020240 AT1G18160.1 51.515 264 93 2 409 639 709 970 6.46e-82 278
Msa0020240 AT1G18160.1 32.374 278 169 4 28 298 99 364 2.42e-30 128
Msa0020240 AT1G08720.1 49.815 271 101 2 402 639 656 924 7.09e-82 278
Msa0020240 AT1G08720.1 32.776 299 180 6 41 331 76 361 3.92e-36 145
Msa0020240 AT1G73660.1 47.267 311 125 4 366 639 695 1003 8.44e-81 276
Msa0020240 AT1G73660.1 33.585 265 153 4 42 298 139 388 3.21e-30 127
Msa0020240 AT5G11850.1 50.000 264 97 2 409 639 603 864 3.84e-79 269
Msa0020240 AT5G11850.1 34.615 260 149 4 42 290 92 341 7.57e-36 145
Msa0020240 AT5G49470.1 47.101 276 109 3 399 639 186 459 2.05e-77 255
Msa0020240 AT1G08720.2 50.988 253 89 2 402 621 656 906 7.68e-77 263
Msa0020240 AT1G08720.2 32.776 299 180 6 41 331 76 361 3.48e-36 145
Msa0020240 AT5G49470.7 47.101 276 109 3 399 639 346 619 3.82e-76 256
Msa0020240 AT5G49470.3 47.101 276 109 3 399 639 473 746 3.63e-75 256
Msa0020240 AT5G49470.4 47.101 276 109 3 399 639 447 720 3.76e-75 256
Msa0020240 AT1G18160.2 51.220 246 85 2 409 621 709 952 3.59e-74 256
Msa0020240 AT1G18160.2 32.374 278 169 4 28 298 99 364 2.13e-30 128
Msa0020240 AT1G67890.1 46.014 276 111 4 399 639 469 741 6.56e-71 244
Msa0020240 AT3G06620.1 44.203 276 117 3 399 639 476 749 1.64e-69 241
Msa0020240 AT3G06630.2 43.636 275 118 3 400 639 417 689 1.23e-68 237
Msa0020240 AT3G06640.2 41.528 301 131 4 372 639 413 701 9.55e-68 235
Msa0020240 AT3G06640.3 41.528 301 131 4 372 639 413 701 9.55e-68 235
Msa0020240 AT3G06640.1 41.528 301 131 4 372 639 413 701 1.51e-67 234
Msa0020240 AT4G23050.2 42.049 283 128 3 391 640 445 724 6.64e-67 233
Msa0020240 AT4G23050.1 42.049 283 128 3 391 640 444 723 6.81e-67 233
Msa0020240 AT1G67890.4 46.484 256 99 4 399 619 341 593 7.60e-66 228
Msa0020240 AT3G06630.1 45.490 255 102 3 400 619 417 669 6.02e-65 226
Msa0020240 AT1G67890.3 46.484 256 99 4 399 619 469 721 7.80e-65 228
Msa0020240 AT1G67890.2 46.484 256 99 4 399 619 469 721 7.80e-65 228
Msa0020240 AT3G58640.1 40.755 265 122 3 403 636 541 801 4.46e-60 215
Msa0020240 AT3G58640.2 40.755 265 122 3 403 636 541 801 4.46e-60 215
Msa0020240 AT2G31010.1 40.000 265 124 3 403 636 507 767 5.04e-58 209
Msa0020240 AT2G31010.2 40.000 265 124 3 403 636 507 767 5.04e-58 209
Msa0020240 AT5G49470.5 46.256 227 85 3 399 590 473 697 3.76e-54 197
Msa0020240 AT5G49470.6 46.018 226 85 3 399 589 473 696 1.71e-53 195
Msa0020240 AT3G06630.6 44.248 226 89 3 400 590 333 556 1.93e-52 190
Msa0020240 AT3G06630.4 44.248 226 89 3 400 590 417 640 9.49e-52 189
Msa0020240 AT3G06630.3 44.248 226 89 3 400 590 417 640 9.49e-52 189
Msa0020240 AT3G06630.5 44.248 226 89 3 400 590 417 640 9.49e-52 189
Msa0020240 AT2G42640.4 37.405 262 128 4 406 637 481 736 7.03e-49 182
Msa0020240 AT2G42640.1 37.405 262 128 4 406 637 519 774 7.37e-49 183
Msa0020240 AT2G17700.1 31.353 303 170 5 378 645 245 544 6.93e-43 162
Msa0020240 AT4G35780.1 31.507 292 161 5 384 640 258 545 6.43e-42 160
Msa0020240 AT5G49470.2 58.974 117 48 0 523 639 691 807 2.16e-40 158
Msa0020240 AT5G49470.2 49.038 104 51 1 399 500 470 573 8.72e-22 100
Msa0020240 AT4G38470.1 34.615 260 140 5 409 639 284 542 2.70e-40 155
Msa0020240 AT4G38470.2 34.615 260 140 5 409 639 284 542 3.61e-40 155
Msa0020240 AT3G06630.7 42.424 198 77 3 400 562 417 612 5.04e-39 152
Msa0020240 AT5G57610.1 33.083 266 130 8 421 641 787 1049 9.43e-35 142
Msa0020240 AT2G35050.1 32.721 272 133 8 417 643 977 1243 2.86e-34 140
Msa0020240 AT2G35050.2 32.721 272 133 8 417 643 977 1243 2.86e-34 140
Msa0020240 AT1G16270.1 34.586 266 125 8 417 637 866 1127 1.19e-33 138
Msa0020240 AT1G16270.2 34.586 266 125 8 417 637 866 1127 1.19e-33 138
Msa0020240 AT1G16270.3 34.586 266 125 8 417 637 866 1127 1.19e-33 138
Msa0020240 AT1G79570.2 31.437 334 165 11 355 637 908 1228 1.24e-33 138
Msa0020240 AT1G79570.1 31.437 334 165 11 355 637 908 1228 1.24e-33 138
Msa0020240 AT1G62400.1 29.964 277 143 3 404 638 75 342 7.07e-33 131
Msa0020240 AT1G04700.1 31.439 264 133 7 421 639 772 1032 1.30e-32 135
Msa0020240 AT1G04700.2 31.439 264 133 7 421 639 772 1032 1.30e-32 135
Msa0020240 AT3G46920.2 34.091 264 126 8 421 639 878 1138 8.42e-32 132
Msa0020240 AT3G46920.1 34.091 264 126 8 421 639 812 1072 1.10e-31 132
Msa0020240 AT4G31170.7 29.329 283 157 8 401 644 119 397 1.53e-31 127
Msa0020240 AT4G31170.6 29.329 283 157 8 401 644 119 397 1.53e-31 127
Msa0020240 AT4G31170.5 29.329 283 157 8 401 644 119 397 1.53e-31 127
Msa0020240 AT4G31170.1 29.329 283 157 8 401 644 119 397 1.53e-31 127
Msa0020240 AT4G31170.2 29.329 283 157 8 401 644 119 397 1.53e-31 127
Msa0020240 AT4G31170.3 29.329 283 157 8 401 644 119 397 1.53e-31 127
Msa0020240 AT4G31170.8 29.329 283 157 8 401 644 119 397 1.53e-31 127
Msa0020240 AT5G58950.1 31.365 271 147 5 406 639 198 466 1.82e-31 129
Msa0020240 AT4G38470.3 35.000 220 111 6 409 599 284 500 3.21e-30 125
Msa0020240 AT3G01490.1 29.730 296 153 4 398 639 91 385 1.11e-29 122
Msa0020240 AT3G24715.1 31.008 258 128 8 421 632 842 1095 6.33e-29 124
Msa0020240 AT3G24715.3 31.008 258 128 8 421 632 842 1095 6.33e-29 124
Msa0020240 AT3G24715.2 31.008 258 128 8 421 632 842 1095 6.33e-29 124
Msa0020240 AT1G14000.1 31.250 256 139 4 421 639 168 423 1.22e-28 119
Msa0020240 AT5G50000.1 29.452 292 137 6 409 639 76 359 1.73e-28 118
Msa0020240 AT2G24360.1 30.943 265 142 6 412 637 123 385 2.40e-28 118
Msa0020240 AT4G18950.2 31.206 282 143 9 400 642 150 419 4.35e-27 115
Msa0020240 AT4G14780.1 27.682 289 154 4 405 639 51 338 4.46e-27 113
Msa0020240 AT4G18950.1 31.206 282 143 9 400 642 150 419 7.22e-27 114
Msa0020240 AT5G01850.1 29.286 280 154 9 402 639 5 282 4.81e-26 110
Msa0020240 AT3G63260.1 28.136 295 152 8 403 639 73 365 6.28e-26 110
Msa0020240 AT3G46930.2 29.433 282 140 7 403 639 191 458 1.66e-25 111
Msa0020240 AT3G46930.1 29.433 282 140 7 403 639 156 423 1.72e-25 110
Msa0020240 AT3G22750.1 25.503 298 150 4 405 639 64 352 4.23e-24 105
Msa0020240 AT2G43850.3 30.534 262 135 6 425 642 205 463 2.52e-23 104
Msa0020240 AT2G43850.1 30.534 262 135 6 425 642 205 463 2.54e-23 104
Msa0020240 AT3G58760.1 28.777 278 157 7 402 639 151 427 1.95e-22 101
Msa0020240 AT3G58760.3 28.674 279 158 7 401 639 213 490 3.32e-22 101
Msa0020240 AT3G58760.5 28.674 279 158 7 401 639 213 490 3.32e-22 101
Msa0020240 AT5G40540.1 28.808 302 150 15 392 639 3 293 9.75e-22 97.8
Msa0020240 AT3G01490.2 29.880 251 121 4 398 594 91 340 1.02e-21 97.8
Msa0020240 AT3G50730.1 27.961 304 156 13 385 640 12 300 1.42e-21 97.4
Msa0020240 AT5G01850.2 26.974 304 154 10 402 639 5 306 3.41e-21 96.3
Msa0020240 AT5G50000.2 29.555 247 105 6 409 594 76 314 2.85e-20 92.8
Msa0020240 AT3G27560.1 27.857 280 151 11 404 636 11 286 6.68e-20 92.4
Msa0020240 AT2G42640.3 41.237 97 57 0 406 502 519 615 1.17e-19 94.0
Msa0020240 AT3G15220.1 32.308 260 135 10 419 644 19 271 1.79e-19 93.2
Msa0020240 AT5G50180.1 26.894 264 148 9 415 636 20 280 5.27e-19 89.4
Msa0020240 AT3G50720.1 27.554 323 173 11 362 640 6 311 2.16e-18 88.2
Msa0020240 AT1G53570.5 28.125 224 148 5 421 634 220 440 2.24e-18 89.7
Msa0020240 AT1G53165.2 30.451 266 132 11 419 644 19 271 1.08e-17 87.8
Msa0020240 AT1G53165.3 30.451 266 132 11 419 644 19 271 1.17e-17 87.4
Msa0020240 AT1G53165.1 30.451 266 132 11 419 644 19 271 1.25e-17 87.4
Msa0020240 AT1G79570.4 30.534 262 118 11 355 565 908 1156 3.57e-17 86.7
Msa0020240 AT1G79570.5 30.534 262 118 11 355 565 908 1156 3.57e-17 86.7
Msa0020240 AT3G58760.6 30.698 215 110 5 402 578 151 364 3.69e-17 84.3
Msa0020240 AT3G58760.2 30.698 215 110 5 402 578 214 427 4.52e-17 84.7
Msa0020240 AT3G58760.4 30.698 215 110 5 402 578 214 427 4.52e-17 84.7
Msa0020240 AT3G07980.1 24.506 253 158 5 413 633 18 269 8.51e-17 85.5
Msa0020240 AT3G07980.2 24.506 253 158 5 413 633 18 269 8.83e-17 85.5
Msa0020240 AT5G40540.4 29.365 252 124 12 392 596 3 247 2.16e-16 80.5
Msa0020240 AT3G13530.1 24.111 253 159 5 413 633 18 269 4.84e-16 82.8
Msa0020240 AT5G58520.1 26.190 252 143 8 428 641 357 603 1.75e-15 80.5
Msa0020240 AT2G25880.2 30.539 167 106 4 413 576 23 182 2.55e-15 76.6
Msa0020240 AT4G08500.1 27.935 247 141 10 421 633 339 582 1.89e-13 73.9
Msa0020240 AT4G31170.9 28.342 187 95 7 401 552 119 301 8.65e-13 70.1
Msa0020240 AT4G31170.10 28.342 187 95 7 401 552 119 301 8.65e-13 70.1
Msa0020240 AT4G31170.4 28.342 187 95 7 401 552 119 301 8.65e-13 70.1
Msa0020240 AT5G01810.1 27.778 252 137 9 421 634 18 262 1.44e-12 70.5
Msa0020240 AT5G01810.2 27.778 252 137 9 421 634 18 262 1.44e-12 70.5
Msa0020240 AT5G01810.3 27.778 252 137 9 421 634 18 262 2.11e-12 69.7
Msa0020240 AT4G08470.1 27.419 248 141 10 421 633 309 552 7.59e-12 68.9
Msa0020240 AT4G08470.3 26.996 263 152 11 406 633 213 470 1.21e-11 67.8
Msa0020240 AT1G34210.1 27.737 274 143 10 418 637 308 580 8.80e-11 65.5
Msa0020240 AT1G34210.2 27.737 274 143 10 418 637 308 580 8.80e-11 65.5

Find 177 sgRNAs with CRISPR-Local

Find 1208 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGTTCACCTTTGATGACTTC+TGG 0.164629 1_1:-35189196 None:intergenic
ATCCAATCGCTTCTTGGATT+TGG 0.194032 1_1:+35176696 Msa0020240:CDS
AATCACTTTCACACCGGTTT+TGG 0.232248 1_1:+35176770 Msa0020240:CDS
ATCTTTCCTGACCAGGTAAA+TGG 0.234135 1_1:+35177408 Msa0020240:intron
CTTTCTACTCGTTGTTATAA+TGG 0.238372 1_1:-35176385 None:intergenic
TGCTCAATCCAATCGCTTCT+TGG 0.242156 1_1:+35176690 Msa0020240:CDS
GCTTCTTGTATAGTGCAATT+TGG 0.260572 1_1:+35178298 Msa0020240:CDS
CTTCTTCTTCTTTCAAGAGC+TGG 0.264659 1_1:+35176593 Msa0020240:CDS
AATGGCCCAATTGTATTTCT+TGG 0.265818 1_1:+35180588 Msa0020240:CDS
TCTGTTACTATTGATAATTT+TGG 0.267330 1_1:-35185195 None:intergenic
TATTAAGTCTTTCAAGTAAC+TGG 0.270249 1_1:+35177646 Msa0020240:CDS
TCTTCCGACGAGGAAAATTT+AGG 0.284706 1_1:+35177820 Msa0020240:CDS
CTGATCAGTTGCAGCTTTGA+TGG 0.290396 1_1:-35177673 None:intergenic
TTACTAGCTCACCACCATTT+TGG 0.290864 1_1:-35176409 None:intergenic
TCCAAACATTGTACTTCTAA+TGG 0.306270 1_1:+35185155 Msa0020240:CDS
ACTTGGATTACAGTTTATTC+AGG 0.307495 1_1:+35191470 Msa0020240:three_prime_UTR
CTGCAAACATTTCATAATAT+AGG 0.321670 1_1:-35191376 None:intergenic
ACTTCTGGGGCCATCCATTC+AGG 0.323285 1_1:-35189181 None:intergenic
ATGCATCCATCCCATGAATT+AGG 0.339314 1_1:-35177470 None:intergenic
ATATTATATATAACATTAAA+AGG 0.343219 1_1:-35192471 None:intergenic
CTATATTATACTATTTCATT+TGG 0.343450 1_1:+35192523 Msa0020240:three_prime_UTR
TATTACTGAACGCACCTATA+TGG 0.353723 1_1:-35182330 None:intergenic
CCCATTAGAAGTACAATGTT+TGG 0.354786 1_1:-35185156 None:intergenic
TAATGATCATATCTTACTTC+GGG 0.356298 1_1:+35192555 Msa0020240:three_prime_UTR
GCCTTGAGAGAACTGCTAAC+TGG 0.362157 1_1:+35177621 Msa0020240:CDS
AGACCAGCAGAGCTCAATTA+AGG 0.363030 1_1:-35191025 None:intergenic
GTTCACCTTTGATGACTTCT+GGG 0.364530 1_1:-35189195 None:intergenic
TTCTTCTTCTTTCAAGAGCT+GGG 0.365101 1_1:+35176594 Msa0020240:CDS
GTATATTCAGCTGTTTCAAC+TGG 0.366760 1_1:-35180559 None:intergenic
TAAGTTAGAAGAGGAAAGTT+GGG 0.373000 1_1:+35176433 Msa0020240:five_prime_UTR
TCAAATAATTCACTACTGAT+TGG 0.381267 1_1:-35182562 None:intergenic
TTAAGTTAGAAGAGGAAAGT+TGG 0.384702 1_1:+35176432 Msa0020240:five_prime_UTR
TGGTGTAATCTTGTGGGAAC+TGG 0.393497 1_1:+35189249 Msa0020240:CDS
TGACCTTGAGGAGGAGGATC+TGG 0.400033 1_1:+35182595 Msa0020240:CDS
ACTGCCTCCATGGTTGTTGA+AGG 0.402660 1_1:-35189276 None:intergenic
CTGCCTTAATTGAGCTCTGC+TGG 0.403646 1_1:+35191022 Msa0020240:CDS
TACTCTGACAAAGTTCTAGA+TGG 0.408190 1_1:+35177441 Msa0020240:CDS
GGGAGTTAAGTTTGCGAAAG+AGG 0.408267 1_1:+35176453 Msa0020240:five_prime_UTR
GTTTCAACTGGCTTGAACCT+TGG 0.409838 1_1:-35180547 None:intergenic
CAGCTTTGGTGTAATCTTGT+GGG 0.410216 1_1:+35189243 Msa0020240:CDS
TTGCAAATCTTGTTTGTAGT+AGG 0.416842 1_1:+35177697 Msa0020240:CDS
TTGTTTGAGCGAGCTGAGAT+AGG 0.419341 1_1:+35176480 Msa0020240:five_prime_UTR
CTTCAGCAAACTGAAATGTT+TGG 0.420528 1_1:+35182283 Msa0020240:CDS
TGAGAAGCGTCGTTTAAGTA+TGG 0.425065 1_1:+35185379 Msa0020240:CDS
ATATTGAACAATATTATACT+TGG 0.427067 1_1:+35191453 Msa0020240:three_prime_UTR
CAGTGTATCATTCTTCCAAT+TGG 0.429190 1_1:+35177886 Msa0020240:CDS
GATTGTCCAAGAAATACAAT+TGG 0.430286 1_1:-35180594 None:intergenic
ATCAGGTTGGCATGTATCCC+CGG 0.432496 1_1:-35180473 None:intergenic
CAGGAGGTACTGTTGATTGT+AGG 0.435550 1_1:+35182248 Msa0020240:intron
TGAAAGTGATTGAGGGGAAT+CGG 0.440351 1_1:-35176758 None:intergenic
CCAAACATTGTACTTCTAAT+GGG 0.441035 1_1:+35185156 Msa0020240:CDS
CCAACTCAGGTATGTGACTT+TGG 0.442569 1_1:+35188999 Msa0020240:intron
TTGAACCTTGGATGACATAA+TGG 0.449304 1_1:-35180535 None:intergenic
AAACTCTAAATCAGCCTGAA+TGG 0.449450 1_1:+35189167 Msa0020240:intron
CTCAACGTTGTCATTACAAT+GGG 0.450349 1_1:+35192621 Msa0020240:three_prime_UTR
AACGAGTAGAAAGACCAAAA+TGG 0.451325 1_1:+35176395 Msa0020240:five_prime_UTR
GCAGAATTCACTGAAGAATC+AGG 0.454417 1_1:-35180490 None:intergenic
CTTGTGTTTGATACCACGTC+AGG 0.455377 1_1:+35180628 Msa0020240:CDS
CCTTGAGAGAACTGCTAACT+GGG 0.455830 1_1:+35177622 Msa0020240:CDS
CTTTCATCTAAAACAGCTGC+TGG 0.457184 1_1:+35189050 Msa0020240:CDS
GAACTGTACTTCGTGCGGAC+TGG 0.460206 1_1:+35182798 Msa0020240:CDS
GCTGGTGGGAACAACCATAT+AGG 0.461323 1_1:+35182316 Msa0020240:CDS
GACATTAGTGATTCAAATGA+TGG 0.464254 1_1:-35177537 None:intergenic
GAGAAAGAAGGCCGCCTCCT+TGG 0.466171 1_1:-35191354 None:intergenic
CATACCAACATTCTGCATAT+CGG 0.467556 1_1:-35177511 None:intergenic
GAGTATATGATTGATTTAGT+AGG 0.468429 1_1:+35180445 Msa0020240:CDS
GTATAGGTTGTTGCAGCTGT+TGG 0.468655 1_1:+35190949 Msa0020240:intron
CCAATGGGTAAGCTTCCAAT+TGG 0.470687 1_1:-35177901 None:intergenic
AGAAGAAGAAGGAGAAGGAG+AGG 0.474237 1_1:-35176728 None:intergenic
ATTGTCCAAGAAATACAATT+GGG 0.479780 1_1:-35180593 None:intergenic
ACGACGCTTCTCATTGATTG+AGG 0.481369 1_1:-35185369 None:intergenic
ACGATTTGAAGAGTTTCTAA+AGG 0.483705 1_1:+35184953 Msa0020240:CDS
AAATCTTGTTTGTAGTAGGA+TGG 0.484748 1_1:+35177701 Msa0020240:CDS
TCAGCTTTGGTGTAATCTTG+TGG 0.488001 1_1:+35189242 Msa0020240:CDS
AAATGCGATGTATTCAGCTT+TGG 0.489589 1_1:+35189229 Msa0020240:CDS
GTTAGCAGTTCTCTCAAGGC+AGG 0.502796 1_1:-35177618 None:intergenic
ATTGATTTAGTAGGAAGGCC+CGG 0.503026 1_1:+35180454 Msa0020240:CDS
TATATATAACATTAAAAGGT+AGG 0.504897 1_1:-35192467 None:intergenic
AGGAGGTACTGTTGATTGTA+GGG 0.505051 1_1:+35182249 Msa0020240:intron
GAAGGAGAAGGAGAGGAGGT+AGG 0.505965 1_1:-35176721 None:intergenic
ATAATGATCATATCTTACTT+CGG 0.508169 1_1:+35192554 Msa0020240:three_prime_UTR
TAGTGCAATTTGGTTCTGAC+AGG 0.508741 1_1:+35178308 Msa0020240:CDS
AGAGAATAAATACCCAAAAC+CGG 0.510221 1_1:-35176783 None:intergenic
TGAAGTTGACCTTGAGGAGG+AGG 0.511456 1_1:+35182589 Msa0020240:CDS
AGGAAAATTTAGGTGCGCGC+TGG 0.512122 1_1:+35177830 Msa0020240:CDS
CGATGGACACAAAGGCCAAT+GGG 0.513571 1_1:-35177916 None:intergenic
ACTTATTCACACTTTAGCAT+TGG 0.516905 1_1:-35191409 None:intergenic
ATCATTTGAATCACTAATGT+CGG 0.518556 1_1:+35177539 Msa0020240:CDS
CAAGTATTGTAGAAAGGACA+TGG 0.523570 1_1:+35178273 Msa0020240:CDS
AGAAGAAGGAGAAGGAGAGG+AGG 0.523827 1_1:-35176725 None:intergenic
TTCCAAATCCAAGAAGCGAT+TGG 0.525298 1_1:-35176698 None:intergenic
GACACATGTTCCTCGGTACC+AGG 0.525797 1_1:-35182524 None:intergenic
CCAATTGGAAGCTTACCCAT+TGG 0.527954 1_1:+35177901 Msa0020240:CDS
GCTAGTAATTAAGTTAGAAG+AGG 0.528721 1_1:+35176424 Msa0020240:five_prime_UTR
AACCGGTGTGAAAGTGATTG+AGG 0.529537 1_1:-35176766 None:intergenic
TCTAAATCAGCCTGAATGGA+TGG 0.531356 1_1:+35189171 Msa0020240:intron
TTGATTGAGGAACCAACACC+TGG 0.531366 1_1:-35185356 None:intergenic
ACCGGTGTGAAAGTGATTGA+GGG 0.533854 1_1:-35176765 None:intergenic
TCAATTAAGGCAGCCACTTG+AGG 0.540560 1_1:-35191012 None:intergenic
TCTCAACGTTGTCATTACAA+TGG 0.541886 1_1:+35192620 Msa0020240:three_prime_UTR
TATTTGCCTTTGTACGTGAA+AGG 0.542445 1_1:-35189022 None:intergenic
CTTTGGCCTTTCACGTACAA+AGG 0.546273 1_1:+35189016 Msa0020240:CDS
TTGAAGGAGAACATTGGGAC+AGG 0.546450 1_1:+35182641 Msa0020240:CDS
ATCTTGTTTGTAGTAGGATG+GGG 0.546717 1_1:+35177703 Msa0020240:CDS
GAGGCAGTTAAATCCTTCAC+AGG 0.551140 1_1:+35189291 Msa0020240:CDS
ATGTTTGGTGCAAACTATGC+TGG 0.552708 1_1:+35182298 Msa0020240:CDS
AATCTTGTTTGTAGTAGGAT+GGG 0.552756 1_1:+35177702 Msa0020240:CDS
CTTGGATGACATAATGGTGA+AGG 0.553501 1_1:-35180529 None:intergenic
ATTGAAAGACACATGTTCCT+CGG 0.553717 1_1:-35182531 None:intergenic
CTTCACCATTATGTCATCCA+AGG 0.557932 1_1:+35180530 Msa0020240:CDS
TAGTAACAGAATATTTATCA+AGG 0.558703 1_1:+35185208 Msa0020240:CDS
TTCATAATATAGGAGAAAGA+AGG 0.560469 1_1:-35191366 None:intergenic
CCCAGTTAGCAGTTCTCTCA+AGG 0.560523 1_1:-35177622 None:intergenic
ATATGGAAAATAACCTGTGA+AGG 0.561782 1_1:-35189304 None:intergenic
GGGATGCAAGTATTGTAGAA+AGG 0.563567 1_1:+35178267 Msa0020240:CDS
ACTTGAGGATTCACATGCCT+CGG 0.563742 1_1:-35190997 None:intergenic
TTGATTTAGTAGGAAGGCCC+GGG 0.569889 1_1:+35180455 Msa0020240:CDS
CCCCTCAATCACTTTCACAC+CGG 0.572453 1_1:+35176764 Msa0020240:CDS
GTACTTCGTGCGGACTGGCG+TGG 0.573485 1_1:+35182803 Msa0020240:CDS
TATCCAGATCCTCCTCCTCA+AGG 0.577458 1_1:-35182598 None:intergenic
CTGCCTCCATGGTTGTTGAA+GGG 0.577783 1_1:-35189275 None:intergenic
CCTACCGTGTCGAATCGCTA+AGG 0.577869 1_1:+35178246 Msa0020240:CDS
GAAGGATTTAACTGCCTCCA+TGG 0.578225 1_1:-35189286 None:intergenic
CTTTAAAGAGCAATGCTCGA+TGG 0.578607 1_1:-35177933 None:intergenic
TCGATGGACACAAAGGCCAA+TGG 0.578921 1_1:-35177917 None:intergenic
AAATTTAGGTGCGCGCTGGA+AGG 0.579154 1_1:+35177834 Msa0020240:CDS
CTACCGTGTCGAATCGCTAA+GGG 0.579256 1_1:+35178247 Msa0020240:CDS
GCTGAAGAGCTGAATTACTC+TGG 0.581284 1_1:+35192423 Msa0020240:three_prime_UTR
TGTTGCTGTGAAGATACTTA+AGG 0.582434 1_1:+35184911 Msa0020240:CDS
ATTTGAAGAGTTTCTAAAGG+AGG 0.583073 1_1:+35184956 Msa0020240:CDS
TCAGGTTGGCATGTATCCCC+GGG 0.585442 1_1:-35180472 None:intergenic
CTTCTGCAAATGCCAGGTGT+TGG 0.591432 1_1:+35185344 Msa0020240:CDS
TTTCTTACTGTAGGGAACCA+AGG 0.593666 1_1:+35191337 Msa0020240:intron
TATGAACTTCTGCAAATGCC+AGG 0.595662 1_1:+35185338 Msa0020240:CDS
AGATAGGAAATGTACGGCGG+TGG 0.596519 1_1:+35176496 Msa0020240:exon
GAAGATGAAGAAGACGAAGA+AGG 0.596700 1_1:+35176568 Msa0020240:CDS
TCATTTAGGTCCTGGTACCG+AGG 0.597693 1_1:+35182514 Msa0020240:intron
TGTTGATTGTAGGGACAAAG+TGG 0.601250 1_1:+35182258 Msa0020240:CDS
AGTACCGATATGCAGAATGT+TGG 0.601833 1_1:+35177507 Msa0020240:CDS
ATGGGATGGATGCATATACA+TGG 0.604853 1_1:+35177478 Msa0020240:CDS
CATCCCTTAGCGATTCGACA+CGG 0.604936 1_1:-35178250 None:intergenic
GAGTCATGAAGTTGACCTTG+AGG 0.605882 1_1:+35182583 Msa0020240:CDS
GTGAAGATACTTAAGGTGCA+AGG 0.610544 1_1:+35184918 Msa0020240:CDS
TGATAACTCGTCAGTTGTAG+TGG 0.611571 1_1:+35177572 Msa0020240:CDS
TGGTGACCCTTCAACAACCA+TGG 0.618144 1_1:+35189269 Msa0020240:CDS
TTGGATGACATAATGGTGAA+GGG 0.620571 1_1:-35180528 None:intergenic
ATTTGGAACTGTACTTCGTG+CGG 0.623642 1_1:+35182793 Msa0020240:CDS
TTCAAAATAAGTTCACTCCA+CGG 0.626128 1_1:-35182623 None:intergenic
AGGAGGATCTGGATATTCCG+TGG 0.626968 1_1:+35182606 Msa0020240:CDS
ATATGATTGATTTAGTAGGA+AGG 0.628312 1_1:+35180449 Msa0020240:CDS
TTAGCAGTTCTCTCAAGGCA+GGG 0.628638 1_1:-35177617 None:intergenic
TTCACCTTTGATGACTTCTG+GGG 0.632134 1_1:-35189194 None:intergenic
AATTCACTGAAGAATCAGGT+TGG 0.635393 1_1:-35180486 None:intergenic
AGCTGAATATACAAAGACAA+TGG 0.652209 1_1:+35180570 Msa0020240:CDS
GAGGCATGTGAATCCTCAAG+TGG 0.653414 1_1:+35190999 Msa0020240:CDS
GCAATGCTCGATGGACACAA+AGG 0.654233 1_1:-35177924 None:intergenic
CCGGTGTGAAAGTGATTGAG+GGG 0.656051 1_1:-35176764 None:intergenic
GAGCTGAGATAGGAAATGTA+CGG 0.656089 1_1:+35176490 Msa0020240:exon
TCATGAAGTTGACCTTGAGG+AGG 0.660990 1_1:+35182586 Msa0020240:CDS
ATGGCCCCAGAAGTCATCAA+AGG 0.661499 1_1:+35189190 Msa0020240:CDS
TTTGGTGCAAACTATGCTGG+TGG 0.667833 1_1:+35182301 Msa0020240:CDS
CCTTAGCGATTCGACACGGT+AGG 0.676647 1_1:-35178246 None:intergenic
GCAAAAGGCTAGAAATTCCG+AGG 0.678048 1_1:+35190980 Msa0020240:CDS
TTTAAGTATGGCATATGACG+TGG 0.682060 1_1:+35185391 Msa0020240:CDS
ACTGTAGGGAACCAAGGAGG+CGG 0.683282 1_1:+35191343 Msa0020240:intron
TGATTTAGTAGGAAGGCCCG+GGG 0.686428 1_1:+35180456 Msa0020240:CDS
GCAAAGGAAACAACCTGACG+TGG 0.686648 1_1:-35180641 None:intergenic
GAAGAGCTGAATTACTCTGG+TGG 0.693112 1_1:+35192426 Msa0020240:three_prime_UTR
GAGTAGAAAGACCAAAATGG+TGG 0.704495 1_1:+35176398 Msa0020240:five_prime_UTR
ACAACTGACGAGTTATCACA+CGG 0.704651 1_1:-35177567 None:intergenic
CTTACTGTAGGGAACCAAGG+AGG 0.707435 1_1:+35191340 Msa0020240:intron
AAGTATTGTAGAAAGGACAT+GGG 0.708862 1_1:+35178274 Msa0020240:CDS
TTGGTGCAAACTATGCTGGT+GGG 0.729855 1_1:+35182302 Msa0020240:CDS
CTTGAGAGAACTGCTAACTG+GGG 0.732889 1_1:+35177623 Msa0020240:CDS
TGACCCTTCAACAACCATGG+AGG 0.747642 1_1:+35189272 Msa0020240:CDS
CTGAGATAGGAAATGTACGG+CGG 0.757937 1_1:+35176493 Msa0020240:exon
TAGGGGAGGATCTTCCGACG+AGG 0.775756 1_1:+35177810 Msa0020240:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATAATTATTTTATTTAAAAA+AGG - chr1_1:35180678-35180697 None:intergenic 0.0%
!!! TTTATTTTTATTATTTTTAA+TGG - chr1_1:35184498-35184517 None:intergenic 0.0%
!!! TCTTTTGTATTTATTATATT+TGG - chr1_1:35178839-35178858 None:intergenic 10.0%
!! TCTTATTAAAGATTATAATA+TGG - chr1_1:35180388-35180407 None:intergenic 10.0%
!! ATATTATAATCTTTAATAAG+AGG + chr1_1:35180387-35180406 Msa0020240:intron 10.0%
!!! ATAAATAAGTTTATTGATTT+TGG + chr1_1:35181146-35181165 Msa0020240:intron 10.0%
!! ATTTATTAAAGAAACAAATT+AGG - chr1_1:35182423-35182442 None:intergenic 10.0%
!! AATTTCTTTATATTGAATTT+CGG + chr1_1:35186204-35186223 Msa0020240:intron 10.0%
!! AATTTCTTTATATTGAATTT+CGG + chr1_1:35186204-35186223 Msa0020240:intron 10.0%
!!! AAATTATCAATTTTAGTTAT+TGG + chr1_1:35187984-35188003 Msa0020240:intron 10.0%
!! TATAGGTATAATATAAATAA+TGG + chr1_1:35189636-35189655 Msa0020240:intron 10.0%
!!! AATAAATTTCTCTTTTTATA+CGG + chr1_1:35190735-35190754 Msa0020240:intron 10.0%
!!! ATTAATAAACTATTTGGTTT+TGG - chr1_1:35176961-35176980 None:intergenic 15.0%
!! GCTTATATTAATAAACTATT+TGG - chr1_1:35176967-35176986 None:intergenic 15.0%
!! CAACTAAATATTCAATTAAA+AGG - chr1_1:35177307-35177326 None:intergenic 15.0%
!! TTAATTGAATATTTAGTTGA+TGG + chr1_1:35177308-35177327 Msa0020240:intron 15.0%
!! TTAAGAAAATAAGAAAGAAT+AGG + chr1_1:35179134-35179153 Msa0020240:intron 15.0%
!!! CATTTTGAAACAAATTTTTT+TGG - chr1_1:35179638-35179657 None:intergenic 15.0%
!!! TAGTTTTAAAAGTAATACTT+TGG - chr1_1:35179741-35179760 None:intergenic 15.0%
!! AAATTATCCTTATTAACTAT+TGG - chr1_1:35179765-35179784 None:intergenic 15.0%
!! AATAGTTAATAAGGATAATT+TGG + chr1_1:35179764-35179783 Msa0020240:intron 15.0%
!! TATTAAAGATTATAATATGG+AGG - chr1_1:35180385-35180404 None:intergenic 15.0%
!! TGAACATATGTTTATAAATT+GGG - chr1_1:35181571-35181590 None:intergenic 15.0%
!! TAAATATCAAAAGTTTAACA+TGG + chr1_1:35182177-35182196 Msa0020240:intron 15.0%
!! ATCTTTCAGTATATAAAATA+TGG - chr1_1:35182974-35182993 None:intergenic 15.0%
!!! TTAACCAATTTTAACATATA+TGG + chr1_1:35183348-35183367 Msa0020240:intron 15.0%
!! TAATAATCAAATTTATCTTG+CGG + chr1_1:35183747-35183766 Msa0020240:intron 15.0%
!!! TTTTGGTTAAAAATGATTTT+AGG + chr1_1:35185262-35185281 Msa0020240:intron 15.0%
!! AATTTCAAATTGTATCTAAA+GGG - chr1_1:35185818-35185837 None:intergenic 15.0%
!! ACTTTATTAATTATTCTGAA+TGG - chr1_1:35185969-35185988 None:intergenic 15.0%
!!! ATTATTGTTATTCATTTGTT+AGG + chr1_1:35186055-35186074 Msa0020240:intron 15.0%
!! ATTTCTTTATATTGAATTTC+GGG + chr1_1:35186205-35186224 Msa0020240:intron 15.0%
!! ACTTTATTAATTATTCTGAA+TGG - chr1_1:35185969-35185988 None:intergenic 15.0%
!!! ATTATTGTTATTCATTTGTT+AGG + chr1_1:35186055-35186074 Msa0020240:intron 15.0%
!! ATTTCTTTATATTGAATTTC+GGG + chr1_1:35186205-35186224 Msa0020240:intron 15.0%
!! TTGAATAGAAATAATAGAAT+AGG + chr1_1:35188161-35188180 Msa0020240:intron 15.0%
!! TGAATAGAAATAATAGAATA+GGG + chr1_1:35188162-35188181 Msa0020240:intron 15.0%
!! TTTACTTTCTATGAATATTT+GGG + chr1_1:35188658-35188677 Msa0020240:intron 15.0%
!!! TATTTTACATAAGAAAAAGT+TGG - chr1_1:35189131-35189150 None:intergenic 15.0%
!! TATGTAAAATAATTCTTTGA+TGG + chr1_1:35189140-35189159 Msa0020240:intron 15.0%
!!! TTTTTTTTGACAATTGATTT+TGG + chr1_1:35189423-35189442 Msa0020240:intron 15.0%
!! TAAATTATTAAGGGTAATAT+AGG + chr1_1:35189619-35189638 Msa0020240:intron 15.0%
!! ATATTGAACAATATTATACT+TGG + chr1_1:35191453-35191472 Msa0020240:three_prime_UTR 15.0%
!!! TTACTTATTTTTGTTTAATG+TGG + chr1_1:35191531-35191550 Msa0020240:intron 15.0%
!! TAGAAAAATTATATATTGCT+TGG - chr1_1:35192208-35192227 None:intergenic 15.0%
!! TATATATAACATTAAAAGGT+AGG - chr1_1:35192470-35192489 None:intergenic 15.0%
!! CTATATTATACTATTTCATT+TGG + chr1_1:35192523-35192542 Msa0020240:three_prime_UTR 15.0%
!! TAAATTACATAAGCACTTAT+AGG - chr1_1:35176911-35176930 None:intergenic 20.0%
!!! TTGTACTAGTAAGAAATTTT+AGG - chr1_1:35177120-35177139 None:intergenic 20.0%
!!! ATATTCAATTAAAAGGTACA+TGG - chr1_1:35177300-35177319 None:intergenic 20.0%
!! ATGAACAAAACTTGTATATA+TGG - chr1_1:35177349-35177368 None:intergenic 20.0%
!!! TTTTTTGAAAAAATGAAGAG+AGG - chr1_1:35177737-35177756 None:intergenic 20.0%
!!! AAGCTTTTATTCTTTTCAAT+AGG + chr1_1:35177791-35177810 Msa0020240:intron 20.0%
!!! AGCTTTTATTCTTTTCAATA+GGG + chr1_1:35177792-35177811 Msa0020240:intron 20.0%
!! ATATGAAACTAGAAGATAAA+TGG - chr1_1:35178078-35178097 None:intergenic 20.0%
!!! AACCAAATTGATGATTTTAT+TGG - chr1_1:35178619-35178638 None:intergenic 20.0%
!!! GGTTTTTAATGATTTGAAAT+AGG + chr1_1:35178703-35178722 Msa0020240:intron 20.0%
!! AAAAGATACTCTAATAATTG+TGG + chr1_1:35178853-35178872 Msa0020240:intron 20.0%
!! AAAGATACTCTAATAATTGT+GGG + chr1_1:35178854-35178873 Msa0020240:intron 20.0%
!! TATCATGTATAAATTGTGAA+GGG - chr1_1:35179185-35179204 None:intergenic 20.0%
!! TTATCATGTATAAATTGTGA+AGG - chr1_1:35179186-35179205 None:intergenic 20.0%
!!! TATTGATTGCCATTTTTAAA+TGG + chr1_1:35179480-35179499 Msa0020240:intron 20.0%
!!! ATTGATTGCCATTTTTAAAT+GGG + chr1_1:35179481-35179500 Msa0020240:intron 20.0%
!! TGTGTTTATGAATATTTATG+AGG + chr1_1:35179540-35179559 Msa0020240:intron 20.0%
!! GTGTTTATGAATATTTATGA+GGG + chr1_1:35179541-35179560 Msa0020240:intron 20.0%
!! AGAAAAAGTTATTATTGCAT+TGG - chr1_1:35179678-35179697 None:intergenic 20.0%
!! AAACTAACCAATAGTTAATA+AGG + chr1_1:35179755-35179774 Msa0020240:intron 20.0%
!! TTTGCTTGTTTCAAATATTT+AGG + chr1_1:35179889-35179908 Msa0020240:intron 20.0%
!!! CAATTAGAGTATTAAGAAAA+GGG + chr1_1:35180704-35180723 Msa0020240:intron 20.0%
!! AAAGTCAATATTTGAAAGTT+CGG - chr1_1:35180821-35180840 None:intergenic 20.0%
!!! TTTTTTTGGTCTCATTTATA+AGG + chr1_1:35180973-35180992 Msa0020240:intron 20.0%
!! AAGGAAAAAATTACAACTTT+AGG + chr1_1:35180992-35181011 Msa0020240:intron 20.0%
!!! AAAGTTTTCTTCTTTATTGA+AGG + chr1_1:35181338-35181357 Msa0020240:intron 20.0%
!! AACATATGTTTATAAATTGG+GGG - chr1_1:35181569-35181588 None:intergenic 20.0%
!! GAACATATGTTTATAAATTG+GGG - chr1_1:35181570-35181589 None:intergenic 20.0%
!! CTGAACATATGTTTATAAAT+TGG - chr1_1:35181572-35181591 None:intergenic 20.0%
!! CAATTTATAAACATATGTTC+AGG + chr1_1:35181570-35181589 Msa0020240:intron 20.0%
!! TTGTCTATTCTATCAATAAA+AGG + chr1_1:35182358-35182377 Msa0020240:intron 20.0%
!! AGTATATAAAATATGGAGAT+AGG - chr1_1:35182967-35182986 None:intergenic 20.0%
!!! GATGTATTTAGTTCATAATA+TGG + chr1_1:35183080-35183099 Msa0020240:intron 20.0%
!! CATACATATTTAACTCTAAA+GGG - chr1_1:35183323-35183342 None:intergenic 20.0%
!! TCATACATATTTAACTCTAA+AGG - chr1_1:35183324-35183343 None:intergenic 20.0%
!! ACATCCATATATGTTAAAAT+TGG - chr1_1:35183355-35183374 None:intergenic 20.0%
!! AATACTTTAACAGTAAATTG+TGG - chr1_1:35183403-35183422 None:intergenic 20.0%
!!! GTATATATTTTAACCTATGA+GGG + chr1_1:35183700-35183719 Msa0020240:intron 20.0%
!!! TATATATTTTAACCTATGAG+GGG + chr1_1:35183701-35183720 Msa0020240:intron 20.0%
!! AATAATCAAATTTATCTTGC+GGG + chr1_1:35183748-35183767 Msa0020240:intron 20.0%
!! AAATCTATTCATAGATGAAT+GGG - chr1_1:35183784-35183803 None:intergenic 20.0%
!! AAAATCTATTCATAGATGAA+TGG - chr1_1:35183785-35183804 None:intergenic 20.0%
!!! ATTTATTCTTTCTTTGCTTT+TGG - chr1_1:35184779-35184798 None:intergenic 20.0%
!!! TTTTTTTCTTTTTCAGATTG+AGG + chr1_1:35185020-35185039 Msa0020240:intron 20.0%
!!! TCTGTTACTATTGATAATTT+TGG - chr1_1:35185198-35185217 None:intergenic 20.0%
!! TAGTAACAGAATATTTATCA+AGG + chr1_1:35185208-35185227 Msa0020240:CDS 20.0%
!!! ATGTTTTATTCTTAACCAAA+TGG + chr1_1:35185289-35185308 Msa0020240:intron 20.0%
!! CAATTTCAAATTGTATCTAA+AGG - chr1_1:35185819-35185838 None:intergenic 20.0%
!! TTTCTTTATATTGAATTTCG+GGG + chr1_1:35186206-35186225 Msa0020240:intron 20.0%
!! TTTCTTTATATTGAATTTCG+GGG + chr1_1:35186206-35186225 Msa0020240:intron 20.0%
!! ATAGATGGTTGAAATTAAAA+AGG - chr1_1:35188212-35188231 None:intergenic 20.0%
!! GATTAATTAGAATATACTGA+TGG - chr1_1:35188385-35188404 None:intergenic 20.0%
!! TAATTGAATTCATTGTAAAG+AGG + chr1_1:35188420-35188439 Msa0020240:intron 20.0%
!! AGAAAATCTGTCTTTATAAA+AGG + chr1_1:35188498-35188517 Msa0020240:intron 20.0%
!! GTTTACTTTCTATGAATATT+TGG + chr1_1:35188657-35188676 Msa0020240:intron 20.0%
!! TTAGGAAAGTCAAAATTAAT+AGG + chr1_1:35188828-35188847 Msa0020240:intron 20.0%
!! TAGGAAAGTCAAAATTAATA+GGG + chr1_1:35188829-35188848 Msa0020240:intron 20.0%
!! TTTGAAAACGATAATTAAAC+AGG - chr1_1:35189517-35189536 None:intergenic 20.0%
!! AGATGATAACTAATACTATT+TGG + chr1_1:35189928-35189947 Msa0020240:intron 20.0%
!! AAATATTACGAATAGAACAA+AGG - chr1_1:35190702-35190721 None:intergenic 20.0%
!! GAGAAATTTATTAAGATGAA+AGG - chr1_1:35190727-35190746 None:intergenic 20.0%
!! TAATTATAATGTGGTTCAAT+AGG + chr1_1:35191263-35191282 Msa0020240:intron 20.0%
!!! TTCAGAAATGTTTCTAAATT+TGG - chr1_1:35191570-35191589 None:intergenic 20.0%
!! AACTTAGCTTATTTATCAAT+GGG + chr1_1:35191665-35191684 Msa0020240:intron 20.0%
!! GGTTATTAAAATCAATTAAG+TGG + chr1_1:35191835-35191854 Msa0020240:intron 20.0%
!!! TACTTTTAGTATAGCAATTA+GGG - chr1_1:35192283-35192302 None:intergenic 20.0%
!! AATTTCGTGTAAAAATATAC+TGG + chr1_1:35192331-35192350 Msa0020240:intron 20.0%
!! ATAATGATCATATCTTACTT+CGG + chr1_1:35192554-35192573 Msa0020240:three_prime_UTR 20.0%
!! AAATTGCATTTCAAAAAGAA+TGG - chr1_1:35192598-35192617 None:intergenic 20.0%
!! AAACATTCTCGATTTACTTT+TGG + chr1_1:35176855-35176874 Msa0020240:intron 25.0%
! ACTTATTTGAGCTTACTATT+TGG - chr1_1:35177083-35177102 None:intergenic 25.0%
! TTCATTAATATTTCCTGAAC+TGG + chr1_1:35177364-35177383 Msa0020240:intron 25.0%
!! ATGGATTTTACCTAATTCAT+GGG + chr1_1:35177460-35177479 Msa0020240:CDS 25.0%
! ATCATTTGAATCACTAATGT+CGG + chr1_1:35177539-35177558 Msa0020240:CDS 25.0%
!! TATTAAGTCTTTCAAGTAAC+TGG + chr1_1:35177646-35177665 Msa0020240:CDS 25.0%
!! GCTTTTATTCTTTTCAATAG+GGG + chr1_1:35177793-35177812 Msa0020240:intron 25.0%
! TTGTCTTCATTTCTTAATGA+TGG + chr1_1:35178102-35178121 Msa0020240:intron 25.0%
! CCTGCAATTAAAATTATCAT+AGG - chr1_1:35178207-35178226 None:intergenic 25.0%
!!! CCTATGATAATTTTAATTGC+AGG + chr1_1:35178204-35178223 Msa0020240:intron 25.0%
! TTGACACATTCATATAAAAC+TGG + chr1_1:35178505-35178524 Msa0020240:intron 25.0%
!!! ATTGATGATTTTATTGGTGT+GGG - chr1_1:35178613-35178632 None:intergenic 25.0%
!!! AATTGATGATTTTATTGGTG+TGG - chr1_1:35178614-35178633 None:intergenic 25.0%
! CACCAATAAAATCATCAATT+TGG + chr1_1:35178614-35178633 Msa0020240:intron 25.0%
!! ATTTGAAATAGGCATATGTT+AGG + chr1_1:35178714-35178733 Msa0020240:intron 25.0%
!! TTTGAAATAGGCATATGTTA+GGG + chr1_1:35178715-35178734 Msa0020240:intron 25.0%
! CTTCAAATATATGTATGAAG+AGG + chr1_1:35178793-35178812 Msa0020240:intron 25.0%
!!! GAACTTGTATTTTTTTAGCT+AGG + chr1_1:35178899-35178918 Msa0020240:intron 25.0%
! TATATGAAACGTTAGAGATA+TGG + chr1_1:35179003-35179022 Msa0020240:intron 25.0%
! CATAAGTAAAACAGAGTAAA+TGG + chr1_1:35179057-35179076 Msa0020240:intron 25.0%
! AAATGGAATAGAAGATTTCT+AGG + chr1_1:35179074-35179093 Msa0020240:intron 25.0%
! TTATATTCCATCCAATTACT+GGG - chr1_1:35179102-35179121 None:intergenic 25.0%
! TTTATATTCCATCCAATTAC+TGG - chr1_1:35179103-35179122 None:intergenic 25.0%
! ATCATGTATAAATTGTGAAG+GGG - chr1_1:35179184-35179203 None:intergenic 25.0%
! GCTAACTAGGAATATTAATT+AGG - chr1_1:35179210-35179229 None:intergenic 25.0%
!!! TTGATTGCCATTTTTAAATG+GGG + chr1_1:35179482-35179501 Msa0020240:intron 25.0%
! TTTCAAATATTTAGGAGAAC+TGG + chr1_1:35179897-35179916 Msa0020240:intron 25.0%
! TGAACAATTGAAAACATTGA+TGG - chr1_1:35179941-35179960 None:intergenic 25.0%
! AGTAAGAATGTGATAGTATT+AGG + chr1_1:35180032-35180051 Msa0020240:intron 25.0%
! GAATTTACATTGATGTACTT+TGG + chr1_1:35180054-35180073 Msa0020240:intron 25.0%
! TAAAAATCTCAACTGAGTTA+GGG + chr1_1:35180079-35180098 Msa0020240:intron 25.0%
!! AAATTAGAGAGTCATTGATT+GGG - chr1_1:35180220-35180239 None:intergenic 25.0%
!!! TGCTGTTTTATGTTTATTTG+TGG - chr1_1:35180312-35180331 None:intergenic 25.0%
! ATACAAATAACATACTGACA+TGG + chr1_1:35180344-35180363 Msa0020240:intron 25.0%
!! GAGTATATGATTGATTTAGT+AGG + chr1_1:35180445-35180464 Msa0020240:CDS 25.0%
!! ATATGATTGATTTAGTAGGA+AGG + chr1_1:35180449-35180468 Msa0020240:CDS 25.0%
! ATTGTCCAAGAAATACAATT+GGG - chr1_1:35180596-35180615 None:intergenic 25.0%
!! GCAATTAGAGTATTAAGAAA+AGG + chr1_1:35180703-35180722 Msa0020240:intron 25.0%
! CAGTATAAAGGCAAATAAAA+AGG - chr1_1:35180735-35180754 None:intergenic 25.0%
!!! GATAGTTGTTTTCAGTATAA+AGG - chr1_1:35180747-35180766 None:intergenic 25.0%
!! TGACTTTTGTAGTAAATCTT+TGG + chr1_1:35180834-35180853 Msa0020240:intron 25.0%
! AAACAAAGTAATGTAACATG+TGG - chr1_1:35180906-35180925 None:intergenic 25.0%
! ACATGTTACATTACTTTGTT+TGG + chr1_1:35180905-35180924 Msa0020240:intron 25.0%
! CAAAAAAAGCTCTTATGATT+AGG - chr1_1:35180961-35180980 None:intergenic 25.0%
!!! CTAATCATAAGAGCTTTTTT+TGG + chr1_1:35180959-35180978 Msa0020240:intron 25.0%
! TGTTGTCTTTGTAATATTAG+TGG + chr1_1:35181057-35181076 Msa0020240:intron 25.0%
! GTTGTCTTTGTAATATTAGT+GGG + chr1_1:35181058-35181077 Msa0020240:intron 25.0%
!!! TTTTGGTTTTTCTTAGTAAC+TGG + chr1_1:35181163-35181182 Msa0020240:intron 25.0%
!!! TTTGGTTTTTCTTAGTAACT+GGG + chr1_1:35181164-35181183 Msa0020240:intron 25.0%
!!! AGTGTTGTTTTGTGTTTTAT+AGG + chr1_1:35181368-35181387 Msa0020240:intron 25.0%
!! TTTATCCCTCTTAGAATTTT+GGG + chr1_1:35181417-35181436 Msa0020240:intron 25.0%
!! TTTATCCCTCTTAGAATTTT+GGG + chr1_1:35181417-35181436 Msa0020240:intron 25.0%
!! TGATACCATCTTAGAATTTT+GGG + chr1_1:35181720-35181739 Msa0020240:intron 25.0%
! TACGAACATATGTTTATAAG+TGG - chr1_1:35181788-35181807 None:intergenic 25.0%
! ATGAAAATCAGCAAATTTAG+AGG - chr1_1:35182223-35182242 None:intergenic 25.0%
! TCAAATAATTCACTACTGAT+TGG - chr1_1:35182565-35182584 None:intergenic 25.0%
!!! TTATTTTGAAGGAGAACATT+GGG + chr1_1:35182636-35182655 Msa0020240:CDS 25.0%
! TACTCTATATATCTTGTACA+AGG - chr1_1:35182681-35182700 None:intergenic 25.0%
! ATGTTGATATCCTTATAATG+AGG - chr1_1:35182873-35182892 None:intergenic 25.0%
!! TCCTTTTATAAGAGACAAAT+GGG + chr1_1:35183045-35183064 Msa0020240:intron 25.0%
!! TCCTTTTTATAAGAGACAAT+GGG - chr1_1:35183130-35183149 None:intergenic 25.0%
! ACTTTAACACAAGAAGATAT+GGG - chr1_1:35183217-35183236 None:intergenic 25.0%
! TCTGTATATTTACTTCTCAA+GGG - chr1_1:35183252-35183271 None:intergenic 25.0%
! ATTGCTTCATAGTTTCTAAT+AGG + chr1_1:35183463-35183482 Msa0020240:intron 25.0%
! TTGCTTCATAGTTTCTAATA+GGG + chr1_1:35183464-35183483 Msa0020240:intron 25.0%
!!! AGTGTAGATTTTAACATAAG+AGG + chr1_1:35183595-35183614 Msa0020240:intron 25.0%
!!! GTGTAGATTTTAACATAAGA+GGG + chr1_1:35183596-35183615 Msa0020240:intron 25.0%
!!! TGTAGATTTTAACATAAGAG+GGG + chr1_1:35183597-35183616 Msa0020240:intron 25.0%
!!! CGTATATATTTTAACCTATG+AGG + chr1_1:35183699-35183718 Msa0020240:intron 25.0%
! ATAATCAAATTTATCTTGCG+GGG + chr1_1:35183749-35183768 Msa0020240:intron 25.0%
!!! CTCACTATTTTAAACAAAAG+AGG + chr1_1:35184635-35184654 Msa0020240:intron 25.0%
! CAGCATAAAAACATCTAAAA+AGG - chr1_1:35184824-35184843 None:intergenic 25.0%
! TATAATATAAAACCATTCCC+TGG - chr1_1:35185046-35185065 None:intergenic 25.0%
! AGTATCTCAGTTTATTTCAT+AGG + chr1_1:35185107-35185126 Msa0020240:intron 25.0%
!!! GTTACTATTGATAATTTTGG+TGG - chr1_1:35185195-35185214 None:intergenic 25.0%
! TTCAAATCTCTATGAACAAT+GGG - chr1_1:35185561-35185580 None:intergenic 25.0%
! TATCTTTACGTGAGAATAAA+AGG + chr1_1:35185653-35185672 Msa0020240:intron 25.0%
! AGAATAAAAGGAATAGTTAC+TGG + chr1_1:35185665-35185684 Msa0020240:intron 25.0%
! GCCATTAGATCAAAAATAAA+CGG + chr1_1:35185687-35185706 Msa0020240:intron 25.0%
!!! ACCGTTTATTTTTGATCTAA+TGG - chr1_1:35185691-35185710 None:intergenic 25.0%
! TGAAGAGAAATACTAGAATA+GGG - chr1_1:35185754-35185773 None:intergenic 25.0%
! TTGAAGAGAAATACTAGAAT+AGG - chr1_1:35185755-35185774 None:intergenic 25.0%
! AGAGTAAAAGTTAGTTAATG+TGG + chr1_1:35185894-35185913 Msa0020240:intron 25.0%
! AAACTGAATCTTTAATGGAA+GGG - chr1_1:35186413-35186432 None:intergenic 25.0%
! TAAATTTCTTCACACAAAGA+GGG - chr1_1:35186842-35186861 None:intergenic 25.0%
! TTAAATTTCTTCACACAAAG+AGG - chr1_1:35186843-35186862 None:intergenic 25.0%
! CTTCCAACAAATTAATAGTT+TGG - chr1_1:35186950-35186969 None:intergenic 25.0%
!!! TGGAAGATAATTTTAGAACA+TGG + chr1_1:35186964-35186983 Msa0020240:intron 25.0%
!!! GGAAGATAATTTTAGAACAT+GGG + chr1_1:35186965-35186984 Msa0020240:intron 25.0%
! ATTCTTCATCATCAAGAATT+TGG - chr1_1:35187136-35187155 None:intergenic 25.0%
!!! ATTCTTGATGATGAAGAATT+TGG + chr1_1:35187137-35187156 Msa0020240:intron 25.0%
!! GAAAATTGATAACAGATGAT+TGG + chr1_1:35187285-35187304 Msa0020240:intron 25.0%
! TATATGAAGACATGTAATCA+GGG + chr1_1:35187329-35187348 Msa0020240:intron 25.0%
! TTGACATATCAAAATCATTC+AGG + chr1_1:35187413-35187432 Msa0020240:intron 25.0%
! AAAATCATTCAGGAAAGATT+TGG + chr1_1:35187423-35187442 Msa0020240:intron 25.0%
! AAATCATTCAGGAAAGATTT+GGG + chr1_1:35187424-35187443 Msa0020240:intron 25.0%
! AGAGTAAAAGTTAGTTAATG+TGG + chr1_1:35185894-35185913 Msa0020240:intron 25.0%
!! AACTTTCAAGTCTGTTATTA+TGG + chr1_1:35188034-35188053 Msa0020240:intron 25.0%
!! ACTTTCAAGTCTGTTATTAT+GGG + chr1_1:35188035-35188054 Msa0020240:intron 25.0%
! AAGAAGATGAAAAGATCAAT+AGG + chr1_1:35188138-35188157 Msa0020240:intron 25.0%
! GAAATTAAAAAGGCTCATTT+AGG - chr1_1:35188202-35188221 None:intergenic 25.0%
!!! ACCATCTATTTTTGATCTAA+TGG + chr1_1:35188223-35188242 Msa0020240:intron 25.0%
! ACCATTAGATCAAAAATAGA+TGG - chr1_1:35188227-35188246 None:intergenic 25.0%
! GATTAATTAGAATAGACTGA+CGG + chr1_1:35188268-35188287 Msa0020240:intron 25.0%
! TCAATAATGATGTGTCTAAT+TGG - chr1_1:35188318-35188337 None:intergenic 25.0%
! TGTCTTTATAAAAGGAAACA+AGG + chr1_1:35188506-35188525 Msa0020240:intron 25.0%
! GTCTTTATAAAAGGAAACAA+GGG + chr1_1:35188507-35188526 Msa0020240:intron 25.0%
! TCTTTATAAAAGGAAACAAG+GGG + chr1_1:35188508-35188527 Msa0020240:intron 25.0%
! ATTCATAGAAAGTAAACATC+AGG - chr1_1:35188654-35188673 None:intergenic 25.0%
! CACAAAATCTTAAAACTGTA+TGG - chr1_1:35188738-35188757 None:intergenic 25.0%
!!! CATACAGTTTTAAGATTTTG+TGG + chr1_1:35188736-35188755 Msa0020240:intron 25.0%
! GTACAAGGAATAATTATTCT+AGG - chr1_1:35188905-35188924 None:intergenic 25.0%
! ATATATGGATCTACAGATTA+TGG + chr1_1:35188948-35188967 Msa0020240:intron 25.0%
! TTTGTTTATAATACCAACTC+AGG + chr1_1:35188986-35189005 Msa0020240:intron 25.0%
! TGAGTTTAAAAACAAACAGA+GGG - chr1_1:35189473-35189492 None:intergenic 25.0%
!! GTTTTTAAACTCACATTTGA+AGG + chr1_1:35189480-35189499 Msa0020240:intron 25.0%
! TCTCAGTAATAAATAGCTAA+GGG - chr1_1:35189576-35189595 None:intergenic 25.0%
! TCTAACAATGTGTTTATATG+TGG + chr1_1:35189704-35189723 Msa0020240:intron 25.0%
! CTAACAATGTGTTTATATGT+GGG + chr1_1:35189705-35189724 Msa0020240:intron 25.0%
! TAACAATGTGTTTATATGTG+GGG + chr1_1:35189706-35189725 Msa0020240:intron 25.0%
!!! AACTAGCTTTTTGTTTTTCA+TGG - chr1_1:35190127-35190146 None:intergenic 25.0%
! ACGCTACTTATATAATTGAA+GGG - chr1_1:35190608-35190627 None:intergenic 25.0%
! AACGCTACTTATATAATTGA+AGG - chr1_1:35190609-35190628 None:intergenic 25.0%
! AAAGCAAAAAGAAAAATCAG+TGG - chr1_1:35190635-35190654 None:intergenic 25.0%
!!! ATGTTTTGTAATTTCTGAAG+AGG + chr1_1:35190667-35190686 Msa0020240:intron 25.0%
!! ATTTCTCTTTTTATACGGAA+AGG + chr1_1:35190740-35190759 Msa0020240:intron 25.0%
! TCACCCAAATTAAAATTTGA+TGG + chr1_1:35190805-35190824 Msa0020240:intron 25.0%
!!! TGGCCATCAAATTTTAATTT+GGG - chr1_1:35190811-35190830 None:intergenic 25.0%
!!! TTGGCCATCAAATTTTAATT+TGG - chr1_1:35190812-35190831 None:intergenic 25.0%
!! AAATTAAAATTTGATGGCCA+AGG + chr1_1:35190811-35190830 Msa0020240:intron 25.0%
! TATTTGGATGTCAAATCAAA+AGG - chr1_1:35190923-35190942 None:intergenic 25.0%
! CATCCAAATATCATTAGTAT+AGG + chr1_1:35190933-35190952 Msa0020240:intron 25.0%
! CAACCTATACTAATGATATT+TGG - chr1_1:35190939-35190958 None:intergenic 25.0%
!!! AATAGATGAAGTTTTAAGCT+TGG + chr1_1:35191090-35191109 Msa0020240:intron 25.0%
! TGAACCACATTATAATTAGT+TGG - chr1_1:35191261-35191280 None:intergenic 25.0%
! CAATGTATTACAAAAAATGC+AGG - chr1_1:35191291-35191310 None:intergenic 25.0%
!! TTTTGTAATACATTGCCATA+TGG + chr1_1:35191296-35191315 Msa0020240:intron 25.0%
! AAACAATAGTTTCTTACTGT+AGG + chr1_1:35191328-35191347 Msa0020240:intron 25.0%
! AACAATAGTTTCTTACTGTA+GGG + chr1_1:35191329-35191348 Msa0020240:intron 25.0%
! TTCATAATATAGGAGAAAGA+AGG - chr1_1:35191369-35191388 None:intergenic 25.0%
! CTGCAAACATTTCATAATAT+AGG - chr1_1:35191379-35191398 None:intergenic 25.0%
! TTGATAAATAAGCTAAGTTC+AGG - chr1_1:35191664-35191683 None:intergenic 25.0%
! GAACTTAGCTTATTTATCAA+TGG + chr1_1:35191664-35191683 Msa0020240:intron 25.0%
! ATTAGACCAATTAGACATTT+AGG + chr1_1:35191760-35191779 Msa0020240:intron 25.0%
! GAATTTCCTAAATGTCTAAT+TGG - chr1_1:35191769-35191788 None:intergenic 25.0%
! TTAATAACCAATTTCTTCCT+GGG - chr1_1:35191824-35191843 None:intergenic 25.0%
! TTTAATAACCAATTTCTTCC+TGG - chr1_1:35191825-35191844 None:intergenic 25.0%
!!! GTCAATGATAATGTTTTTGA+TGG - chr1_1:35192009-35192028 None:intergenic 25.0%
! AATTATATATTGCTTGGCTT+AGG - chr1_1:35192202-35192221 None:intergenic 25.0%
!! GTACTTTTAGTATAGCAATT+AGG - chr1_1:35192284-35192303 None:intergenic 25.0%
!! ACACGAAATTTTATGCAAAA+CGG - chr1_1:35192321-35192340 None:intergenic 25.0%
! TAATGATCATATCTTACTTC+GGG + chr1_1:35192555-35192574 Msa0020240:three_prime_UTR 25.0%
CTTTCTACTCGTTGTTATAA+TGG - chr1_1:35176388-35176407 None:intergenic 30.0%
GCTAGTAATTAAGTTAGAAG+AGG + chr1_1:35176424-35176443 Msa0020240:five_prime_UTR 30.0%
TTAAGTTAGAAGAGGAAAGT+TGG + chr1_1:35176432-35176451 Msa0020240:five_prime_UTR 30.0%
TAAGTTAGAAGAGGAAAGTT+GGG + chr1_1:35176433-35176452 Msa0020240:five_prime_UTR 30.0%
AGAGAATAAATACCCAAAAC+CGG - chr1_1:35176786-35176805 None:intergenic 30.0%
CTTACTATTTGGATAGCTTA+TGG - chr1_1:35177072-35177091 None:intergenic 30.0%
TCAAATAAGTCAATCCATAC+AGG + chr1_1:35177093-35177112 Msa0020240:intron 30.0%
!!! AAGAAATTTTAGGACCTGTA+TGG - chr1_1:35177110-35177129 None:intergenic 30.0%
CAAAGCTAATTTACACTATC+AGG - chr1_1:35177270-35177289 None:intergenic 30.0%
! CTGATAGTGTAAATTAGCTT+TGG + chr1_1:35177268-35177287 Msa0020240:intron 30.0%
TTTATTAATCTTTCCTGACC+AGG + chr1_1:35177401-35177420 Msa0020240:intron 30.0%
!! GATGGATTTTACCTAATTCA+TGG + chr1_1:35177459-35177478 Msa0020240:CDS 30.0%
! ATTTTACCTAATTCATGGGA+TGG + chr1_1:35177464-35177483 Msa0020240:CDS 30.0%
GACATTAGTGATTCAAATGA+TGG - chr1_1:35177540-35177559 None:intergenic 30.0%
! TTGCAAATCTTGTTTGTAGT+AGG + chr1_1:35177697-35177716 Msa0020240:CDS 30.0%
! AAATCTTGTTTGTAGTAGGA+TGG + chr1_1:35177701-35177720 Msa0020240:CDS 30.0%
! AATCTTGTTTGTAGTAGGAT+GGG + chr1_1:35177702-35177721 Msa0020240:CDS 30.0%
! TTTATTCTTTTCAATAGGGG+AGG + chr1_1:35177796-35177815 Msa0020240:intron 30.0%
ATGGGTCAAAAATAACGAAT+CGG - chr1_1:35177972-35177991 None:intergenic 30.0%
!!! GTTATTTTTGACCCATTTTC+TGG + chr1_1:35177976-35177995 Msa0020240:intron 30.0%
AAATGTTCTGACCAGAAAAT+GGG - chr1_1:35177990-35178009 None:intergenic 30.0%
AAAATGTTCTGACCAGAAAA+TGG - chr1_1:35177991-35178010 None:intergenic 30.0%
!!! ATTTTAATTGCAGGTGTTAG+CGG + chr1_1:35178213-35178232 Msa0020240:intron 30.0%
! AAGTATTGTAGAAAGGACAT+GGG + chr1_1:35178274-35178293 Msa0020240:CDS 30.0%
! ACTCTGTTTTACTTATGCTT+AGG - chr1_1:35179054-35179073 None:intergenic 30.0%
ATCTTATCTCCTAACAAAGA+CGG + chr1_1:35179279-35179298 Msa0020240:intron 30.0%
TCTAATAAGAGAGAGATTGA+AGG + chr1_1:35179344-35179363 Msa0020240:intron 30.0%
CCAAAACTATTACAAGACTA+CGG - chr1_1:35179443-35179462 None:intergenic 30.0%
!!! CTTGTAATAGTTTTGGCTAA+AGG + chr1_1:35179447-35179466 Msa0020240:intron 30.0%
!!! TGATTGCCATTTTTAAATGG+GGG + chr1_1:35179483-35179502 Msa0020240:intron 30.0%
!!! TTCAAAATGAGTGTCGTTTT+AGG - chr1_1:35179846-35179865 None:intergenic 30.0%
!! AAACGACACTCATTTTGAAA+CGG + chr1_1:35179847-35179866 Msa0020240:intron 30.0%
GTAAAAATCTCAACTGAGTT+AGG + chr1_1:35180078-35180097 Msa0020240:intron 30.0%
AAAAATCTCAACTGAGTTAG+GGG + chr1_1:35180080-35180099 Msa0020240:intron 30.0%
GAAATTAGAGAGTCATTGAT+TGG - chr1_1:35180221-35180240 None:intergenic 30.0%
ATCAATGACTCTCTAATTTC+AGG + chr1_1:35180221-35180240 Msa0020240:intron 30.0%
AAGATTATAATATGGAGGAG+AGG - chr1_1:35180380-35180399 None:intergenic 30.0%
TAAATCAATCATATACTCCC+TGG - chr1_1:35180443-35180462 None:intergenic 30.0%
AGCTGAATATACAAAGACAA+TGG + chr1_1:35180570-35180589 Msa0020240:CDS 30.0%
GATTGTCCAAGAAATACAAT+TGG - chr1_1:35180597-35180616 None:intergenic 30.0%
!! TTTAAAAAAGGCATCCAGAA+GGG - chr1_1:35180666-35180685 None:intergenic 30.0%
!! ATTTAAAAAAGGCATCCAGA+AGG - chr1_1:35180667-35180686 None:intergenic 30.0%
ATCTATAACTATAAAAGCCC+AGG - chr1_1:35180798-35180817 None:intergenic 30.0%
CAAAGACAACATCTTAAATG+AGG - chr1_1:35181048-35181067 None:intergenic 30.0%
!! ATTTTCCATGAAGGTATGTT+TGG + chr1_1:35181099-35181118 Msa0020240:intron 30.0%
! TTTTTCCAAACATACCTTCA+TGG - chr1_1:35181107-35181126 None:intergenic 30.0%
! GTTTATCCCTCTTAGAATTT+TGG + chr1_1:35181416-35181435 Msa0020240:intron 30.0%
! GTTTATCCCTCTTAGAATTT+TGG + chr1_1:35181416-35181435 Msa0020240:intron 30.0%
! CTGATACCATCTTAGAATTT+TGG + chr1_1:35181719-35181738 Msa0020240:intron 30.0%
TACCTTATCTCATCAAATGT+GGG + chr1_1:35181806-35181825 Msa0020240:intron 30.0%
!! TCAACAATTCCTTTTGTTGT+GGG + chr1_1:35181833-35181852 Msa0020240:intron 30.0%
!! GAAATTTCCTAGTAGTTTTG+TGG + chr1_1:35181868-35181887 Msa0020240:intron 30.0%
AACAATATCAATATCACGCA+AGG - chr1_1:35182091-35182110 None:intergenic 30.0%
TAGGCATATTAAGTATCAGA+AGG - chr1_1:35182404-35182423 None:intergenic 30.0%
! TTCTCTGTTTTCTGTCTTAA+TGG + chr1_1:35182461-35182480 Msa0020240:intron 30.0%
ATGAGATGGCATATCAAATT+AGG - chr1_1:35182498-35182517 None:intergenic 30.0%
TTTGATATGCCATCTCATTT+AGG + chr1_1:35182500-35182519 Msa0020240:intron 30.0%
TTCAAAATAAGTTCACTCCA+CGG - chr1_1:35182626-35182645 None:intergenic 30.0%
!!! CTTATTTTGAAGGAGAACAT+TGG + chr1_1:35182635-35182654 Msa0020240:CDS 30.0%
!! AGCAACAATAACTGTTTTTC+AGG + chr1_1:35182767-35182786 Msa0020240:intron 30.0%
!! GCAACAATAACTGTTTTTCA+GGG + chr1_1:35182768-35182787 Msa0020240:intron 30.0%
ATTTGTCTGTCCTCATTATA+AGG + chr1_1:35182860-35182879 Msa0020240:intron 30.0%
TGAAAGATAAAACACGTCAT+AGG + chr1_1:35182986-35183005 Msa0020240:intron 30.0%
TCTCTTATAAAAGGACAAGA+GGG - chr1_1:35183040-35183059 None:intergenic 30.0%
! GTCCTTTTATAAGAGACAAA+TGG + chr1_1:35183044-35183063 Msa0020240:intron 30.0%
ACCCATTTGTCTCTTATAAA+AGG - chr1_1:35183049-35183068 None:intergenic 30.0%
ACCCATTGTCTCTTATAAAA+AGG + chr1_1:35183126-35183145 Msa0020240:intron 30.0%
! GTCCTTTTTATAAGAGACAA+TGG - chr1_1:35183131-35183150 None:intergenic 30.0%
CACTTTAACACAAGAAGATA+TGG - chr1_1:35183218-35183237 None:intergenic 30.0%
CTCTGTATATTTACTTCTCA+AGG - chr1_1:35183253-35183272 None:intergenic 30.0%
AATTGACCAAGTGTTTATCA+AGG + chr1_1:35183566-35183585 Msa0020240:intron 30.0%
ATGTGATTCAATCATCTTTC+AGG + chr1_1:35183626-35183645 Msa0020240:intron 30.0%
TGTGATTCAATCATCTTTCA+GGG + chr1_1:35183627-35183646 Msa0020240:intron 30.0%
TCTAGTATACTTTGCATAAG+AGG + chr1_1:35183668-35183687 Msa0020240:intron 30.0%
CTAGTATACTTTGCATAAGA+GGG + chr1_1:35183669-35183688 Msa0020240:intron 30.0%
TAGTATACTTTGCATAAGAG+GGG + chr1_1:35183670-35183689 Msa0020240:intron 30.0%
TAATCAAATTTATCTTGCGG+GGG + chr1_1:35183750-35183769 Msa0020240:intron 30.0%
GTTTGAATTGGTGTATACAA+TGG - chr1_1:35183808-35183827 None:intergenic 30.0%
AGTCTAAATATACCAAGCAA+TGG - chr1_1:35183841-35183860 None:intergenic 30.0%
AATATCCTAAGAAAGTTCAC+TGG + chr1_1:35184062-35184081 Msa0020240:intron 30.0%
ATGTGCGATAAAAGAAATCT+AGG + chr1_1:35184138-35184157 Msa0020240:intron 30.0%
ATGGAAAGAGGATAAAGTAA+GGG + chr1_1:35184184-35184203 Msa0020240:intron 30.0%
ACCATCTATATACCAAAAGA+AGG + chr1_1:35184212-35184231 Msa0020240:intron 30.0%
! ACCTTCTTTTGGTATATAGA+TGG - chr1_1:35184216-35184235 None:intergenic 30.0%
!! ATTGATAGTCTACCTTCTTT+TGG - chr1_1:35184227-35184246 None:intergenic 30.0%
CATCACTTCTCAACAAAATA+TGG - chr1_1:35184361-35184380 None:intergenic 30.0%
CAATTCCATCTATTAACTCT+AGG + chr1_1:35184566-35184585 Msa0020240:intron 30.0%
! CTTGAAGTTGTATCCTATTT+TGG - chr1_1:35184664-35184683 None:intergenic 30.0%
CAAAATAGGATACAACTTCA+AGG + chr1_1:35184662-35184681 Msa0020240:intron 30.0%
! GATACAACTTCAAGGTATTT+AGG + chr1_1:35184670-35184689 Msa0020240:intron 30.0%
AGGAATACTAATTGTCACAA+TGG - chr1_1:35184804-35184823 None:intergenic 30.0%
GTAACACAGTATTTGGTTAT+CGG - chr1_1:35184882-35184901 None:intergenic 30.0%
ACGATTTGAAGAGTTTCTAA+AGG + chr1_1:35184953-35184972 Msa0020240:CDS 30.0%
! ATTTGAAGAGTTTCTAAAGG+AGG + chr1_1:35184956-35184975 Msa0020240:CDS 30.0%
TCCAAACATTGTACTTCTAA+TGG + chr1_1:35185155-35185174 Msa0020240:CDS 30.0%
CCAAACATTGTACTTCTAAT+GGG + chr1_1:35185156-35185175 Msa0020240:CDS 30.0%
!! CTATTGATAATTTTGGTGGT+TGG - chr1_1:35185191-35185210 None:intergenic 30.0%
AAAAAAGTGATGATTGTGTC+AGG - chr1_1:35185245-35185264 None:intergenic 30.0%
!!! GACACAATCATCACTTTTTT+TGG + chr1_1:35185245-35185264 Msa0020240:intron 30.0%
CTTCAAATCTCTATGAACAA+TGG - chr1_1:35185562-35185581 None:intergenic 30.0%
!! TTTGAAGTCTCCAAATCTTT+TGG + chr1_1:35185575-35185594 Msa0020240:intron 30.0%
GAATCATCAACCAAAAGATT+TGG - chr1_1:35185588-35185607 None:intergenic 30.0%
TGATGATTCATACACTGTTA+AGG + chr1_1:35185599-35185618 Msa0020240:intron 30.0%
ATTGTATCTAAAGGGAAGAA+AGG - chr1_1:35185810-35185829 None:intergenic 30.0%
! TTTGAAATTGAATTGCCGAT+TGG + chr1_1:35185829-35185848 Msa0020240:intron 30.0%
GTAAAAGTTAGTTAATGTGG+TGG + chr1_1:35185897-35185916 Msa0020240:intron 30.0%
GCACTAATTGTTATGTGAAT+GGG + chr1_1:35185919-35185938 Msa0020240:intron 30.0%
CACTAATTGTTATGTGAATG+GGG + chr1_1:35185920-35185939 Msa0020240:intron 30.0%
! ACATTGATTGTCATGTGAAT+GGG + chr1_1:35185990-35186009 Msa0020240:intron 30.0%
GGTTATAAAAGAGAGGAAAA+GGG + chr1_1:35186012-35186031 Msa0020240:intron 30.0%
GAAACTGAATCTTTAATGGA+AGG - chr1_1:35186414-35186433 None:intergenic 30.0%
TCCATTAAAGATTCAGTTTC+TGG + chr1_1:35186414-35186433 Msa0020240:intron 30.0%
TCCAGAAACTGAATCTTTAA+TGG - chr1_1:35186418-35186437 None:intergenic 30.0%
AGAAATTTAAAGACCTGATG+TGG + chr1_1:35186853-35186872 Msa0020240:intron 30.0%
!!! TCAGAAGAGGTTTTGAAATT+GGG + chr1_1:35187081-35187100 Msa0020240:intron 30.0%
GAAGAATTTGGTATAAAAGC+CGG + chr1_1:35187149-35187168 Msa0020240:intron 30.0%
CATATACACTAGAAGTAATG+TGG - chr1_1:35187315-35187334 None:intergenic 30.0%
GTATATGAAGACATGTAATC+AGG + chr1_1:35187328-35187347 Msa0020240:intron 30.0%
ATATGAAGACATGTAATCAG+GGG + chr1_1:35187330-35187349 Msa0020240:intron 30.0%
AGCTCTTGATGTTCATAATA+TGG + chr1_1:35187373-35187392 Msa0020240:intron 30.0%
AATTCACTTGAGAGACAAAT+AGG - chr1_1:35187491-35187510 None:intergenic 30.0%
CATTACTTCTTCTTAATACG+AGG - chr1_1:35187523-35187542 None:intergenic 30.0%
CTCGTATTAAGAAGAAGTAA+TGG + chr1_1:35187521-35187540 Msa0020240:intron 30.0%
GTAAAAGTTAGTTAATGTGG+TGG + chr1_1:35185897-35185916 Msa0020240:intron 30.0%
GCACTAATTGTTATGTGAAT+GGG + chr1_1:35185919-35185938 Msa0020240:intron 30.0%
CACTAATTGTTATGTGAATG+GGG + chr1_1:35185920-35185939 Msa0020240:intron 30.0%
! ACATTGATTGTCATGTGAAT+GGG + chr1_1:35185990-35186009 Msa0020240:intron 30.0%
GGTTATAAAAGAGAGGAAAA+GGG + chr1_1:35186012-35186031 Msa0020240:intron 30.0%
! ATTTTCGTTATCAGAAAGAG+AGG + chr1_1:35188084-35188103 Msa0020240:intron 30.0%
TTATCAGAAAGAGAGGTAAA+TGG + chr1_1:35188091-35188110 Msa0020240:intron 30.0%
TATCAGAAAGAGAGGTAAAT+GGG + chr1_1:35188092-35188111 Msa0020240:intron 30.0%
! AGACACATCATTATTGATTG+TGG + chr1_1:35188321-35188340 Msa0020240:intron 30.0%
! GACACATCATTATTGATTGT+GGG + chr1_1:35188322-35188341 Msa0020240:intron 30.0%
!! TGATTGTGGGTGATTTTAAT+TGG + chr1_1:35188335-35188354 Msa0020240:intron 30.0%
! ATAAAGACAGATTTTCTTCC+AGG - chr1_1:35188495-35188514 None:intergenic 30.0%
! GTTATTGTATGTTTTCTAGG+TGG - chr1_1:35188632-35188651 None:intergenic 30.0%
! CAGGTTATTGTATGTTTTCT+AGG - chr1_1:35188635-35188654 None:intergenic 30.0%
!! AAGAGTACTACTATTAGGAA+GGG - chr1_1:35188715-35188734 None:intergenic 30.0%
!! TATGGAAGAGTACTACTATT+AGG - chr1_1:35188720-35188739 None:intergenic 30.0%
!!! GTTTTAAGATTTTGTGGAAC+AGG + chr1_1:35188742-35188761 Msa0020240:intron 30.0%
! TTCTAGGCAAAACCTTTTTA+AGG - chr1_1:35188889-35188908 None:intergenic 30.0%
ATATGGAAAATAACCTGTGA+AGG - chr1_1:35189307-35189326 None:intergenic 30.0%
! TTTTCCATATCATGATGCTT+TGG + chr1_1:35189317-35189336 Msa0020240:intron 30.0%
GTGAGTTTAAAAACAAACAG+AGG - chr1_1:35189474-35189493 None:intergenic 30.0%
GCTCAATGCACATTAATTAT+TGG + chr1_1:35189537-35189556 Msa0020240:intron 30.0%
CTCTCAGTAATAAATAGCTA+AGG - chr1_1:35189577-35189596 None:intergenic 30.0%
ATTACTGAGAGAGAAATAGA+TGG + chr1_1:35189586-35189605 Msa0020240:intron 30.0%
AACAATGTGTTTATATGTGG+GGG + chr1_1:35189707-35189726 Msa0020240:intron 30.0%
TATAATGCATGAATCCTAGT+AGG + chr1_1:35190025-35190044 Msa0020240:intron 30.0%
CGCTACTTATATAATTGAAG+GGG - chr1_1:35190607-35190626 None:intergenic 30.0%
TTTGGGTGAATCACAATATA+AGG - chr1_1:35190794-35190813 None:intergenic 30.0%
AGATAACTAACATACAACCT+TGG - chr1_1:35190831-35190850 None:intergenic 30.0%
!! ATGTCAAATCAAAAGGCATT+TGG - chr1_1:35190916-35190935 None:intergenic 30.0%
TACAGACAACTCATTAACAA+TGG + chr1_1:35191178-35191197 Msa0020240:intron 30.0%
CATTATAATTAGTTGGCCAA+TGG - chr1_1:35191254-35191273 None:intergenic 30.0%
TTGGCCAACTAATTATAATG+TGG + chr1_1:35191254-35191273 Msa0020240:intron 30.0%
TTGTTTCAGATTCAACCATA+TGG - chr1_1:35191314-35191333 None:intergenic 30.0%
ACTTATTCACACTTTAGCAT+TGG - chr1_1:35191412-35191431 None:intergenic 30.0%
ACTTGGATTACAGTTTATTC+AGG + chr1_1:35191470-35191489 Msa0020240:three_prime_UTR 30.0%
TGAGCTATTCATGATTTACT+TGG + chr1_1:35191619-35191638 Msa0020240:intron 30.0%
ATCAATGGGAAAATTGAGTA+TGG + chr1_1:35191679-35191698 Msa0020240:intron 30.0%
TCTAATATGTTTGACCCAAA+AGG - chr1_1:35191746-35191765 None:intergenic 30.0%
ATGGACCAATGTTGTTAAAT+GGG + chr1_1:35191867-35191886 Msa0020240:intron 30.0%
TGCCAATAGTATTTCTTGTT+GGG + chr1_1:35192034-35192053 Msa0020240:intron 30.0%
AAGAATCACTGAAAAACACA+AGG + chr1_1:35192074-35192093 Msa0020240:intron 30.0%
AGAATCACTGAAAAACACAA+GGG + chr1_1:35192075-35192094 Msa0020240:intron 30.0%
!!! ATTTTTAGCAAACTAGTTGC+AGG + chr1_1:35192128-35192147 Msa0020240:intron 30.0%
! AGGGATTTTCATTGTTAGTT+GGG - chr1_1:35192264-35192283 None:intergenic 30.0%
! TAGGGATTTTCATTGTTAGT+TGG - chr1_1:35192265-35192284 None:intergenic 30.0%
! ACGAAATTTTATGCAAAACG+GGG - chr1_1:35192319-35192338 None:intergenic 30.0%
! CACGAAATTTTATGCAAAAC+GGG - chr1_1:35192320-35192339 None:intergenic 30.0%
TACTGGTATACCTTAATTGA+TGG + chr1_1:35192348-35192367 Msa0020240:intron 30.0%
ACAAGCTTAACCATCAATTA+AGG - chr1_1:35192361-35192380 None:intergenic 30.0%
!! TATTGCTGATTGTTTCTGTT+TGG + chr1_1:35192387-35192406 Msa0020240:intron 30.0%
AACGAGTAGAAAGACCAAAA+TGG + chr1_1:35176395-35176414 Msa0020240:five_prime_UTR 35.0%
TTCTTCTTCTTTCAAGAGCT+GGG + chr1_1:35176594-35176613 Msa0020240:CDS 35.0%
GAGAATGTTTATGCGATGAT+AGG - chr1_1:35176845-35176864 None:intergenic 35.0%
AATAAGCTGAAAACAGCTCA+TGG + chr1_1:35177028-35177047 Msa0020240:intron 35.0%
TCCTGAACTGGAATTATATC+AGG + chr1_1:35177376-35177395 Msa0020240:intron 35.0%
ACCTGATATAATTCCAGTTC+AGG - chr1_1:35177380-35177399 None:intergenic 35.0%
ATTGCAAACAACCATTTACC+TGG - chr1_1:35177422-35177441 None:intergenic 35.0%
!! TACTCTGACAAAGTTCTAGA+TGG + chr1_1:35177441-35177460 Msa0020240:CDS 35.0%
CATACCAACATTCTGCATAT+CGG - chr1_1:35177514-35177533 None:intergenic 35.0%
! ATCTTGTTTGTAGTAGGATG+GGG + chr1_1:35177703-35177722 Msa0020240:CDS 35.0%
CAGTGTATCATTCTTCCAAT+TGG + chr1_1:35177886-35177905 Msa0020240:CDS 35.0%
!! TCTTAATGATGGATACACCT+TGG + chr1_1:35178113-35178132 Msa0020240:intron 35.0%
! CAAGTATTGTAGAAAGGACA+TGG + chr1_1:35178273-35178292 Msa0020240:CDS 35.0%
GCTTCTTGTATAGTGCAATT+TGG + chr1_1:35178298-35178317 Msa0020240:CDS 35.0%
ATTATTTGCGACTTTGTGTG+TGG + chr1_1:35178378-35178397 Msa0020240:intron 35.0%
TTATTTGCGACTTTGTGTGT+GGG + chr1_1:35178379-35178398 Msa0020240:intron 35.0%
CATTAAACTGCGGTATAATG+TGG - chr1_1:35178531-35178550 None:intergenic 35.0%
CACATTATACCGCAGTTTAA+TGG + chr1_1:35178529-35178548 Msa0020240:intron 35.0%
!! TAGGGTACCTAGAGATATTT+TGG + chr1_1:35178733-35178752 Msa0020240:intron 35.0%
!! AGGGTACCTAGAGATATTTT+GGG + chr1_1:35178734-35178753 Msa0020240:intron 35.0%
! ATTTCTAGGAACCCAGTAAT+TGG + chr1_1:35179088-35179107 Msa0020240:intron 35.0%
CTATGAGTTAGTAACAATGC+AGG - chr1_1:35179243-35179262 None:intergenic 35.0%
AATAAGAGAGAGATTGAAGG+TGG + chr1_1:35179347-35179366 Msa0020240:intron 35.0%
AGGTGGAATTTCATCTTTAG+TGG + chr1_1:35179364-35179383 Msa0020240:intron 35.0%
GTATGTAGAAGACTTGTAGT+TGG + chr1_1:35179396-35179415 Msa0020240:intron 35.0%
!!! CCGTAGTCTTGTAATAGTTT+TGG + chr1_1:35179440-35179459 Msa0020240:intron 35.0%
TGCTATCCCCCATTTAAAAA+TGG - chr1_1:35179492-35179511 None:intergenic 35.0%
ATAGCACTTGTCTACAAGAT+AGG + chr1_1:35179506-35179525 Msa0020240:intron 35.0%
!! AAGCGACACTCATTTTGAAA+CGG - chr1_1:35179612-35179631 None:intergenic 35.0%
ATTGCATTGGAAACTGAAAG+CGG - chr1_1:35179665-35179684 None:intergenic 35.0%
! TGTGCAGAGTATTAATTGGA+GGG - chr1_1:35179712-35179731 None:intergenic 35.0%
! GTAGTGTGCAGAGTATTAAT+TGG - chr1_1:35179716-35179735 None:intergenic 35.0%
CATGTAATATGTCTGCAACA+TGG + chr1_1:35179973-35179992 Msa0020240:intron 35.0%
AATACATGTACACCTTTCCA+GGG + chr1_1:35180423-35180442 Msa0020240:intron 35.0%
AATTCACTGAAGAATCAGGT+TGG - chr1_1:35180489-35180508 None:intergenic 35.0%
TTGGATGACATAATGGTGAA+GGG - chr1_1:35180531-35180550 None:intergenic 35.0%
TTGAACCTTGGATGACATAA+TGG - chr1_1:35180538-35180557 None:intergenic 35.0%
! GTATATTCAGCTGTTTCAAC+TGG - chr1_1:35180562-35180581 None:intergenic 35.0%
AATGGCCCAATTGTATTTCT+TGG + chr1_1:35180588-35180607 Msa0020240:CDS 35.0%
!! GCTGTGTTATTTACAACTTC+TGG + chr1_1:35180934-35180953 Msa0020240:intron 35.0%
! TGTCTCACAATTTTCCATGA+AGG + chr1_1:35181090-35181109 Msa0020240:intron 35.0%
TGACATTATAATACTACCGC+TGG - chr1_1:35181191-35181210 None:intergenic 35.0%
! TGACTTGCATTAGTTGTACT+TGG + chr1_1:35181227-35181246 Msa0020240:intron 35.0%
GACTTGCATTAGTTGTACTT+GGG + chr1_1:35181228-35181247 Msa0020240:intron 35.0%
TCTTCTTTATTGAAGGCAGA+AGG + chr1_1:35181345-35181364 Msa0020240:intron 35.0%
! CTCAACCCAAAATTCTAAGA+GGG - chr1_1:35181425-35181444 None:intergenic 35.0%
CTAACTCAACCTTACAAAAC+CGG + chr1_1:35181446-35181465 Msa0020240:intron 35.0%
TCTAAGAGGGATAAACTAGA+GGG - chr1_1:35181492-35181511 None:intergenic 35.0%
! TTCTAAGAGGGATAAACTAG+AGG - chr1_1:35181493-35181512 None:intergenic 35.0%
CTAACTCAACCTTACAAAAC+CGG + chr1_1:35181446-35181465 Msa0020240:intron 35.0%
AGGCATTAACTCATTCAATG+TGG + chr1_1:35181590-35181609 Msa0020240:intron 35.0%
GGCATTAACTCATTCAATGT+GGG + chr1_1:35181591-35181610 Msa0020240:intron 35.0%
! CACAACCCAAAATTCTAAGA+TGG - chr1_1:35181728-35181747 None:intergenic 35.0%
CCAATTTGAAAGGTTGAGTT+AGG - chr1_1:35181751-35181770 None:intergenic 35.0%
CCTAACTCAACCTTTCAAAT+TGG + chr1_1:35181748-35181767 Msa0020240:intron 35.0%
!! AACCTTTCAAATTGGCTTGT+TGG + chr1_1:35181756-35181775 Msa0020240:intron 35.0%
GTACCTTATCTCATCAAATG+TGG + chr1_1:35181805-35181824 Msa0020240:intron 35.0%
! CTCAACAATTCCTTTTGTTG+TGG + chr1_1:35181832-35181851 Msa0020240:intron 35.0%
AACAAAACACCCACAACAAA+AGG - chr1_1:35181845-35181864 None:intergenic 35.0%
ACAATAGCCACAAAACTACT+AGG - chr1_1:35181878-35181897 None:intergenic 35.0%
!!! TAGTAGTTTTGTGGCTATTG+TGG + chr1_1:35181877-35181896 Msa0020240:intron 35.0%
CACAAAACAAACACAATGCA+AGG - chr1_1:35181926-35181945 None:intergenic 35.0%
!!! TTTGTTTTGTGCTTTCCTAC+AGG + chr1_1:35181935-35181954 Msa0020240:intron 35.0%
TTACACCATAAAATGCCTGT+AGG - chr1_1:35181953-35181972 None:intergenic 35.0%
!!! CGCAAGGTTTTAAACTGATA+TGG - chr1_1:35182075-35182094 None:intergenic 35.0%
! AATTTAGAGGTATGCAACTG+CGG - chr1_1:35182210-35182229 None:intergenic 35.0%
!!! TTGCTGATTTTCATCATGAC+AGG + chr1_1:35182229-35182248 Msa0020240:intron 35.0%
CTTCAGCAAACTGAAATGTT+TGG + chr1_1:35182283-35182302 Msa0020240:CDS 35.0%
TATTACTGAACGCACCTATA+TGG - chr1_1:35182333-35182352 None:intergenic 35.0%
ATTGAAAGACACATGTTCCT+CGG - chr1_1:35182534-35182553 None:intergenic 35.0%
!!! GTGGAGTGAACTTATTTTGA+AGG + chr1_1:35182625-35182644 Msa0020240:CDS 35.0%
!!! AACTGTTTTTCAGGGTCATT+TGG + chr1_1:35182776-35182795 Msa0020240:intron 35.0%
AAGATAAAACACGTCATAGG+AGG + chr1_1:35182989-35183008 Msa0020240:intron 35.0%
AGATAAAACACGTCATAGGA+GGG + chr1_1:35182990-35183009 Msa0020240:intron 35.0%
!!! AGGGAGCATTTTATAAAGCT+GGG - chr1_1:35183021-35183040 None:intergenic 35.0%
GTCTCTTATAAAAGGACAAG+AGG - chr1_1:35183041-35183060 None:intergenic 35.0%
TCTCTTATAAAAAGGACCAG+AGG + chr1_1:35183134-35183153 Msa0020240:intron 35.0%
CTCTTATAAAAAGGACCAGA+GGG + chr1_1:35183135-35183154 Msa0020240:intron 35.0%
GTAATTCAAACCTCTCTCAT+GGG - chr1_1:35183191-35183210 None:intergenic 35.0%
TGTAATTCAAACCTCTCTCA+TGG - chr1_1:35183192-35183211 None:intergenic 35.0%
GTATATTTACTTCTCAAGGG+AGG - chr1_1:35183249-35183268 None:intergenic 35.0%
GTGATTCAATCATCTTTCAG+GGG + chr1_1:35183628-35183647 Msa0020240:intron 35.0%
AGTATACTTTGCATAAGAGG+GGG + chr1_1:35183671-35183690 Msa0020240:intron 35.0%
!!! ATATTTTAACCTATGAGGGG+AGG + chr1_1:35183704-35183723 Msa0020240:intron 35.0%
!!! TATTTTAACCTATGAGGGGA+GGG + chr1_1:35183705-35183724 Msa0020240:intron 35.0%
AATATACCAAGCAATGGCAA+AGG - chr1_1:35183835-35183854 None:intergenic 35.0%
CAAGTAACAACACTTCAACT+TGG + chr1_1:35183865-35183884 Msa0020240:intron 35.0%
CTTCTCACTTCTCTGATAAA+TGG + chr1_1:35183889-35183908 Msa0020240:intron 35.0%
!!! GTTAACTGTTTTGATCTCCT+AGG - chr1_1:35183955-35183974 None:intergenic 35.0%
CATTGTTGTCTTTGGTATAG+AGG - chr1_1:35184017-35184036 None:intergenic 35.0%
! CTAGTTTGCATTGTTGTCTT+TGG - chr1_1:35184025-35184044 None:intergenic 35.0%
CAAAGACAACAATGCAAACT+AGG + chr1_1:35184023-35184042 Msa0020240:intron 35.0%
TGCGATAAAAGAAATCTAGG+AGG + chr1_1:35184141-35184160 Msa0020240:intron 35.0%
GATGGAAAGAGGATAAAGTA+AGG + chr1_1:35184183-35184202 Msa0020240:intron 35.0%
GAAGCTGCAACAATTTGAAA+AGG + chr1_1:35184264-35184283 Msa0020240:intron 35.0%
! TGTTTGAAACAAAAGAGCCT+GGG + chr1_1:35184299-35184318 Msa0020240:intron 35.0%
CACTTCTCAACAAAATATGG+AGG - chr1_1:35184358-35184377 None:intergenic 35.0%
TGTTGAGAAGTGATGATACA+AGG + chr1_1:35184366-35184385 Msa0020240:intron 35.0%
TTCCATCTATTAACTCTAGG+TGG + chr1_1:35184569-35184588 Msa0020240:intron 35.0%
ATCCACCTAGAGTTAATAGA+TGG - chr1_1:35184574-35184593 None:intergenic 35.0%
ACAAAAGAGGTCTCCAAAAT+AGG + chr1_1:35184648-35184667 Msa0020240:intron 35.0%
! AACTTCAAGGTATTTAGGAG+AGG + chr1_1:35184675-35184694 Msa0020240:intron 35.0%
GCAAAGAAATGAAACGACTA+TGG + chr1_1:35184736-35184755 Msa0020240:intron 35.0%
TGTTGCTGTGAAGATACTTA+AGG + chr1_1:35184911-35184930 Msa0020240:CDS 35.0%
! CCCATTAGAAGTACAATGTT+TGG - chr1_1:35185159-35185178 None:intergenic 35.0%
TTTAAGTATGGCATATGACG+TGG + chr1_1:35185391-35185410 Msa0020240:CDS 35.0%
GAGATGTGATATGTTTGTCT+AGG + chr1_1:35185500-35185519 Msa0020240:intron 35.0%
AAATCTCTATGAACAATGGG+AGG - chr1_1:35185558-35185577 None:intergenic 35.0%
AAAGTTCAAAGTGGGGAATA+TGG + chr1_1:35185869-35185888 Msa0020240:intron 35.0%
GGCACTAATTGTTATGTGAA+TGG + chr1_1:35185918-35185937 Msa0020240:intron 35.0%
! GACATTGATTGTCATGTGAA+TGG + chr1_1:35185989-35186008 Msa0020240:intron 35.0%
! CATTGATTGTCATGTGAATG+GGG + chr1_1:35185991-35186010 Msa0020240:intron 35.0%
TGAATGGGGTTATAAAAGAG+AGG + chr1_1:35186005-35186024 Msa0020240:intron 35.0%
GGGTTATAAAAGAGAGGAAA+AGG + chr1_1:35186011-35186030 Msa0020240:intron 35.0%
AAGAATGAAACAGATCACGA+TGG + chr1_1:35186456-35186475 Msa0020240:intron 35.0%
AAACAGATCACGATGGAATT+GGG + chr1_1:35186463-35186482 Msa0020240:intron 35.0%
AACGAAGAATACAACGAAAC+AGG + chr1_1:35186620-35186639 Msa0020240:intron 35.0%
AGGAGGTTCATTTGTAACTT+TGG + chr1_1:35186647-35186666 Msa0020240:intron 35.0%
GGAGGTTCATTTGTAACTTT+GGG + chr1_1:35186648-35186667 Msa0020240:intron 35.0%
GAGGTTCATTTGTAACTTTG+GGG + chr1_1:35186649-35186668 Msa0020240:intron 35.0%
! ATTTGTAACTTTGGGGATGA+AGG + chr1_1:35186656-35186675 Msa0020240:intron 35.0%
TTAACAGCAATCACTGTTGA+CGG - chr1_1:35186816-35186835 None:intergenic 35.0%
ATTTCTTTCTCATCCACATC+AGG - chr1_1:35186869-35186888 None:intergenic 35.0%
TGGATGAGAAAGAAATGCAT+AGG + chr1_1:35186873-35186892 Msa0020240:intron 35.0%
GGATGAGAAAGAAATGCATA+GGG + chr1_1:35186874-35186893 Msa0020240:intron 35.0%
GATGAGAAAGAAATGCATAG+GGG + chr1_1:35186875-35186894 Msa0020240:intron 35.0%
AAGAAATGCATAGGGGTAAA+AGG + chr1_1:35186882-35186901 Msa0020240:intron 35.0%
AGAAATGCATAGGGGTAAAA+GGG + chr1_1:35186883-35186902 Msa0020240:intron 35.0%
ACAAATTAATAGTTTGGCCC+TGG - chr1_1:35186944-35186963 None:intergenic 35.0%
!! GGGCCAAACTATTAATTTGT+TGG + chr1_1:35186944-35186963 Msa0020240:intron 35.0%
! ATGGGCTGAAATAGAGATAA+GGG + chr1_1:35186983-35187002 Msa0020240:intron 35.0%
CAATTTCAAAACCTCTTCTG+AGG - chr1_1:35187082-35187101 None:intergenic 35.0%
!!! CTCAGAAGAGGTTTTGAAAT+TGG + chr1_1:35187080-35187099 Msa0020240:intron 35.0%
!!! CAGAAGAGGTTTTGAAATTG+GGG + chr1_1:35187082-35187101 Msa0020240:intron 35.0%
TCATCATCAAGAATTTGGAG+TGG - chr1_1:35187131-35187150 None:intergenic 35.0%
TTTGTTCTGCACACTAAAGT+TGG - chr1_1:35187462-35187481 None:intergenic 35.0%
TACTTCTTCTTAATACGAGG+AGG - chr1_1:35187520-35187539 None:intergenic 35.0%
TTATAACAACCTTGTCCTCA+AGG - chr1_1:35187560-35187579 None:intergenic 35.0%
AGGACAAGGTTGTTATAAGA+AGG + chr1_1:35187562-35187581 Msa0020240:intron 35.0%
ACAAGGTTGTTATAAGAAGG+TGG + chr1_1:35187565-35187584 Msa0020240:intron 35.0%
!! TATAAGAAGGTGGCATTGAT+AGG + chr1_1:35187575-35187594 Msa0020240:intron 35.0%
AAAGTTCAAAGTGGGGAATA+TGG + chr1_1:35185869-35185888 Msa0020240:intron 35.0%
GGCACTAATTGTTATGTGAA+TGG + chr1_1:35185918-35185937 Msa0020240:intron 35.0%
! GACATTGATTGTCATGTGAA+TGG + chr1_1:35185989-35186008 Msa0020240:intron 35.0%
! CATTGATTGTCATGTGAATG+GGG + chr1_1:35185991-35186010 Msa0020240:intron 35.0%
TGAATGGGGTTATAAAAGAG+AGG + chr1_1:35186005-35186024 Msa0020240:intron 35.0%
GGGTTATAAAAGAGAGGAAA+AGG + chr1_1:35186011-35186030 Msa0020240:intron 35.0%
! ATGTTTTCTAGGTGGAAAAC+TGG - chr1_1:35188624-35188643 None:intergenic 35.0%
! AACGCAAATGCTCATTTTGT+AGG - chr1_1:35188684-35188703 None:intergenic 35.0%
!! GAAGAGTACTACTATTAGGA+AGG - chr1_1:35188716-35188735 None:intergenic 35.0%
TCAACGAGATAGAAAAGCTT+GGG - chr1_1:35188802-35188821 None:intergenic 35.0%
CTATCTCGTTGAGAAGATTT+AGG + chr1_1:35188810-35188829 Msa0020240:intron 35.0%
ATAGAGTGCACTCCTTAAAA+AGG + chr1_1:35188874-35188893 Msa0020240:intron 35.0%
TATATCCATAAACGCATGCA+AGG - chr1_1:35188933-35188952 None:intergenic 35.0%
TGCATGCGTTTATGGATATA+TGG + chr1_1:35188933-35188952 Msa0020240:intron 35.0%
TATTTGCCTTTGTACGTGAA+AGG - chr1_1:35189025-35189044 None:intergenic 35.0%
! AAACTAACGCTTTTCAGTTG+AGG - chr1_1:35189092-35189111 None:intergenic 35.0%
AAACTCTAAATCAGCCTGAA+TGG + chr1_1:35189167-35189186 Msa0020240:intron 35.0%
AAATGCGATGTATTCAGCTT+TGG + chr1_1:35189229-35189248 Msa0020240:CDS 35.0%
! CAATCCAAAGCATCATGATA+TGG - chr1_1:35189324-35189343 None:intergenic 35.0%
GAGGAACAATATCTTTCTCA+TGG - chr1_1:35189366-35189385 None:intergenic 35.0%
CCATCTTAGAAATTGTGGTT+GGG - chr1_1:35189774-35189793 None:intergenic 35.0%
ACCATCTTAGAAATTGTGGT+TGG - chr1_1:35189775-35189794 None:intergenic 35.0%
CTGTACCATCTTAGAAATTG+TGG - chr1_1:35189779-35189798 None:intergenic 35.0%
CTCCTCCAAAATTATTCGTT+GGG + chr1_1:35189802-35189821 Msa0020240:intron 35.0%
GGAGCATGAATATAAATGGT+GGG - chr1_1:35189860-35189879 None:intergenic 35.0%
TGGAGCATGAATATAAATGG+TGG - chr1_1:35189861-35189880 None:intergenic 35.0%
ATGTTAAAAGAGTCCCACAT+CGG + chr1_1:35189900-35189919 Msa0020240:intron 35.0%
TATCATCTCTTATCCGATGT+GGG - chr1_1:35189916-35189935 None:intergenic 35.0%
TTATCATCTCTTATCCGATG+TGG - chr1_1:35189917-35189936 None:intergenic 35.0%
! AAAAGCTAGTTTCATGTGTC+TGG + chr1_1:35190136-35190155 Msa0020240:intron 35.0%
CAATTCACGTAGAAAATCTC+AGG + chr1_1:35190211-35190230 Msa0020240:intron 35.0%
TGCATTACAGTAAGCATGAA+AGG + chr1_1:35190374-35190393 Msa0020240:intron 35.0%
TACGAATAGAACAAAGGAGA+AGG - chr1_1:35190696-35190715 None:intergenic 35.0%
TGTATGTTAGTTATCTCCTC+TGG + chr1_1:35190835-35190854 Msa0020240:intron 35.0%
AGTAATGATCTATGCACAGA+CGG - chr1_1:35190882-35190901 None:intergenic 35.0%
!!! AGATGAAGTTTTAAGCTTGG+TGG + chr1_1:35191093-35191112 Msa0020240:intron 35.0%
TACATTCAGAGTTATGCCAT+TGG + chr1_1:35191130-35191149 Msa0020240:intron 35.0%
TGTCTGTATGTGTCTCTATA+AGG - chr1_1:35191166-35191185 None:intergenic 35.0%
ATAATTAGTTGGCCAATGGT+TGG - chr1_1:35191250-35191269 None:intergenic 35.0%
TAGTTAACCCAGGAAGAAAT+TGG + chr1_1:35191814-35191833 Msa0020240:intron 35.0%
TTAACAACATTGGTCCATGA+AGG - chr1_1:35191865-35191884 None:intergenic 35.0%
CATGGACCAATGTTGTTAAA+TGG + chr1_1:35191866-35191885 Msa0020240:intron 35.0%
TACCATATAAACACGCATTG+CGG - chr1_1:35191955-35191974 None:intergenic 35.0%
!! ATGTTTTTGATGGCAGATTG+CGG - chr1_1:35191999-35192018 None:intergenic 35.0%
CAACAAGAAATACTATTGGC+AGG - chr1_1:35192035-35192054 None:intergenic 35.0%
CTGCCAATAGTATTTCTTGT+TGG + chr1_1:35192033-35192052 Msa0020240:intron 35.0%
GACCCAACAAGAAATACTAT+TGG - chr1_1:35192039-35192058 None:intergenic 35.0%
! TGTTAGTTGGGGTACTTAAT+TGG - chr1_1:35192252-35192271 None:intergenic 35.0%
! GGGATTTTCATTGTTAGTTG+GGG - chr1_1:35192263-35192282 None:intergenic 35.0%
! GAAATTTTATGCAAAACGGG+GGG - chr1_1:35192317-35192336 None:intergenic 35.0%
! CGAAATTTTATGCAAAACGG+GGG - chr1_1:35192318-35192337 None:intergenic 35.0%
TCTCAACGTTGTCATTACAA+TGG + chr1_1:35192620-35192639 Msa0020240:three_prime_UTR 35.0%
CTCAACGTTGTCATTACAAT+GGG + chr1_1:35192621-35192640 Msa0020240:three_prime_UTR 35.0%
GAGTAGAAAGACCAAAATGG+TGG + chr1_1:35176398-35176417 Msa0020240:five_prime_UTR 40.0%
! TTACTAGCTCACCACCATTT+TGG - chr1_1:35176412-35176431 None:intergenic 40.0%
GAGCTGAGATAGGAAATGTA+CGG + chr1_1:35176490-35176509 Msa0020240:exon 40.0%
GAAGATGAAGAAGACGAAGA+AGG + chr1_1:35176568-35176587 Msa0020240:CDS 40.0%
CTTCTTCTTCTTTCAAGAGC+TGG + chr1_1:35176593-35176612 Msa0020240:CDS 40.0%
ATCCAATCGCTTCTTGGATT+TGG + chr1_1:35176696-35176715 Msa0020240:CDS 40.0%
TTCCAAATCCAAGAAGCGAT+TGG - chr1_1:35176701-35176720 None:intergenic 40.0%
GAAGAAGAAGAAGAAGGAGA+AGG - chr1_1:35176736-35176755 None:intergenic 40.0%
TCGGAAGAAGAAGAAGAAGA+AGG - chr1_1:35176742-35176761 None:intergenic 40.0%
TGAAAGTGATTGAGGGGAAT+CGG - chr1_1:35176761-35176780 None:intergenic 40.0%
!!! AATCACTTTCACACCGGTTT+TGG + chr1_1:35176770-35176789 Msa0020240:CDS 40.0%
!!! ATCACTTTCACACCGGTTTT+GGG + chr1_1:35176771-35176790 Msa0020240:CDS 40.0%
! AGCTAGCTTGAAGAATCTTC+AGG + chr1_1:35177004-35177023 Msa0020240:intron 40.0%
ACAGAAAAAGTGAGCACAAC+CGG - chr1_1:35177169-35177188 None:intergenic 40.0%
ATCTTTCCTGACCAGGTAAA+TGG + chr1_1:35177408-35177427 Msa0020240:intron 40.0%
AAACAACCATTTACCTGGTC+AGG - chr1_1:35177417-35177436 None:intergenic 40.0%
ATGCATCCATCCCATGAATT+AGG - chr1_1:35177473-35177492 None:intergenic 40.0%
ATGGGATGGATGCATATACA+TGG + chr1_1:35177478-35177497 Msa0020240:CDS 40.0%
!! AGTACCGATATGCAGAATGT+TGG + chr1_1:35177507-35177526 Msa0020240:CDS 40.0%
ACAACTGACGAGTTATCACA+CGG - chr1_1:35177570-35177589 None:intergenic 40.0%
TGATAACTCGTCAGTTGTAG+TGG + chr1_1:35177572-35177591 Msa0020240:CDS 40.0%
TCTTCCGACGAGGAAAATTT+AGG + chr1_1:35177820-35177839 Msa0020240:CDS 40.0%
! CTTTAAAGAGCAATGCTCGA+TGG - chr1_1:35177936-35177955 None:intergenic 40.0%
ATTCACAGTTCGAAACTCCA+AGG - chr1_1:35178133-35178152 None:intergenic 40.0%
! GGGATGCAAGTATTGTAGAA+AGG + chr1_1:35178267-35178286 Msa0020240:CDS 40.0%
!! TAGTGCAATTTGGTTCTGAC+AGG + chr1_1:35178308-35178327 Msa0020240:CDS 40.0%
! TATACCGCAGTTTAATGGAC+TGG + chr1_1:35178534-35178553 Msa0020240:intron 40.0%
! GGGTACCTAGAGATATTTTG+GGG + chr1_1:35178735-35178754 Msa0020240:intron 40.0%
!! ACCTAGAGATATTTTGGGGA+AGG + chr1_1:35178739-35178758 Msa0020240:intron 40.0%
TCCTTCCCCAAAATATCTCT+AGG - chr1_1:35178743-35178762 None:intergenic 40.0%
!! TGGCGTTCTTACACTAGTTT+TGG - chr1_1:35178819-35178838 None:intergenic 40.0%
TAATTGTGGGTATGCACGAA+AGG + chr1_1:35178867-35178886 Msa0020240:intron 40.0%
AATTGTGGGTATGCACGAAA+GGG + chr1_1:35178868-35178887 Msa0020240:intron 40.0%
CACCAAAATGAGCCAAGAAT+TGG + chr1_1:35178935-35178954 Msa0020240:intron 40.0%
! CACCAATTCTTGGCTCATTT+TGG - chr1_1:35178940-35178959 None:intergenic 40.0%
TTAGCTGGAGAGTTGAAAGA+GGG + chr1_1:35178978-35178997 Msa0020240:intron 40.0%
AACGTTAGAGATATGGTGAC+AGG + chr1_1:35179010-35179029 Msa0020240:intron 40.0%
!! TGACAGGCCTTTGAAACATA+CGG + chr1_1:35179026-35179045 Msa0020240:intron 40.0%
! TTAGGCACCGTATGTTTCAA+AGG - chr1_1:35179036-35179055 None:intergenic 40.0%
AGTAACAATGCAGGCTAATG+AGG - chr1_1:35179234-35179253 None:intergenic 40.0%
TATCTCCTAACAAAGACGGA+AGG + chr1_1:35179283-35179302 Msa0020240:intron 40.0%
TCTACAAGATAGGTGACAGA+AGG + chr1_1:35179516-35179535 Msa0020240:intron 40.0%
CTACAAGATAGGTGACAGAA+GGG + chr1_1:35179517-35179536 Msa0020240:intron 40.0%
!!! GACACTCATTTTGAAACGGA+GGG - chr1_1:35179851-35179870 None:intergenic 40.0%
! GTGTGCAGAGTATTAATTGG+AGG - chr1_1:35179713-35179732 None:intergenic 40.0%
GATCAGAGACATGATAGACT+CGG + chr1_1:35180151-35180170 Msa0020240:intron 40.0%
CTCTTGAGTCTTGAATCTCT+TGG - chr1_1:35180182-35180201 None:intergenic 40.0%
! CATACTGACATGGTCAGTTT+TGG + chr1_1:35180354-35180373 Msa0020240:intron 40.0%
GAATACATGTACACCTTTCC+AGG + chr1_1:35180422-35180441 Msa0020240:intron 40.0%
CAATCATATACTCCCTGGAA+AGG - chr1_1:35180438-35180457 None:intergenic 40.0%
! ATTGATTTAGTAGGAAGGCC+CGG + chr1_1:35180454-35180473 Msa0020240:CDS 40.0%
GCAGAATTCACTGAAGAATC+AGG - chr1_1:35180493-35180512 None:intergenic 40.0%
CTTGGATGACATAATGGTGA+AGG - chr1_1:35180532-35180551 None:intergenic 40.0%
CTTCACCATTATGTCATCCA+AGG + chr1_1:35180530-35180549 Msa0020240:CDS 40.0%
GCTCAACCCAAAATTCTAAG+AGG - chr1_1:35181426-35181445 None:intergenic 40.0%
!! CGGTTTTGTAAGGTTGAGTT+AGG - chr1_1:35181448-35181467 None:intergenic 40.0%
TAAGAGGGATAAACTAGAGG+GGG - chr1_1:35181490-35181509 None:intergenic 40.0%
CTAAGAGGGATAAACTAGAG+GGG - chr1_1:35181491-35181510 None:intergenic 40.0%
! CTCGACCCAAAATTCTAAGA+GGG - chr1_1:35181505-35181524 None:intergenic 40.0%
!! CGGTTTTGTAAGGTTGAGTT+AGG - chr1_1:35181448-35181467 None:intergenic 40.0%
TGCTATCAGGTTACCACTAT+CGG - chr1_1:35181672-35181691 None:intergenic 40.0%
CACCAACAAGCCAATTTGAA+AGG - chr1_1:35181761-35181780 None:intergenic 40.0%
!! TTCAAATTGGCTTGTTGGTG+AGG + chr1_1:35181761-35181780 Msa0020240:intron 40.0%
GTCCCACATTTGATGAGATA+AGG - chr1_1:35181811-35181830 None:intergenic 40.0%
!! TTGTTGTGGGTGTTTTGTTG+AGG + chr1_1:35181846-35181865 Msa0020240:intron 40.0%
!!! TAGTTTTGTGGCTATTGTGG+TGG + chr1_1:35181880-35181899 Msa0020240:intron 40.0%
! GCTTTCCTACAGGCATTTTA+TGG + chr1_1:35181945-35181964 Msa0020240:intron 40.0%
TTTCTTCCTATGCCGTATCA+AGG - chr1_1:35182127-35182146 None:intergenic 40.0%
! CTGATTTTCATCATGACAGG+AGG + chr1_1:35182232-35182251 Msa0020240:intron 40.0%
!! AGGAGGTACTGTTGATTGTA+GGG + chr1_1:35182249-35182268 Msa0020240:intron 40.0%
! TGTTGATTGTAGGGACAAAG+TGG + chr1_1:35182258-35182277 Msa0020240:CDS 40.0%
!! ATGTTTGGTGCAAACTATGC+TGG + chr1_1:35182298-35182317 Msa0020240:CDS 40.0%
!! TTCTCTAAGACAGACTGCAT+GGG - chr1_1:35182721-35182740 None:intergenic 40.0%
!! TTTCTCTAAGACAGACTGCA+TGG - chr1_1:35182722-35182741 None:intergenic 40.0%
! ATTTGGAACTGTACTTCGTG+CGG + chr1_1:35182793-35182812 Msa0020240:CDS 40.0%
!!! GAGGGAGCATTTTATAAAGC+TGG - chr1_1:35183022-35183041 None:intergenic 40.0%
CTCTATTGTTATACTCCCTC+TGG - chr1_1:35183153-35183172 None:intergenic 40.0%
AAGGGAGTAGAGTGTAATTC+AGG - chr1_1:35183305-35183324 None:intergenic 40.0%
ACCAAGTGTTTATCAAGGCA+GGG + chr1_1:35183571-35183590 Msa0020240:intron 40.0%
ATTCAATCATCTTTCAGGGG+AGG + chr1_1:35183631-35183650 Msa0020240:intron 40.0%
GGCAAAGGTAACGTTTGAAT+TGG - chr1_1:35183820-35183839 None:intergenic 40.0%
ATCGAGAAGTCCTTAGTAGA+AGG + chr1_1:35183975-35183994 Msa0020240:intron 40.0%
TTGGTATAGAGGTCATTCCA+TGG - chr1_1:35184006-35184025 None:intergenic 40.0%
TCTCTCCAGTGAACTTTCTT+AGG - chr1_1:35184070-35184089 None:intergenic 40.0%
TCGTTCTCGAATCTCTTAGT+TGG - chr1_1:35184101-35184120 None:intergenic 40.0%
TCTAGGAGGAAGAGAAAATG+AGG + chr1_1:35184155-35184174 Msa0020240:intron 40.0%
AGAGAAAATGAGGATTGCGA+TGG + chr1_1:35184165-35184184 Msa0020240:intron 40.0%
!! CAGGCTCTTTTGTTTCAAAC+AGG - chr1_1:35184300-35184319 None:intergenic 40.0%
! CTGTTTGAAACAAAAGAGCC+TGG + chr1_1:35184298-35184317 Msa0020240:intron 40.0%
! ATGATGCTGATGCTTTTGCA+TGG + chr1_1:35184399-35184418 Msa0020240:intron 40.0%
! TGCTTTTGCATGGATGTGTA+AGG + chr1_1:35184409-35184428 Msa0020240:intron 40.0%
CTTGTTCACTTGTACACTCT+AGG - chr1_1:35184531-35184550 None:intergenic 40.0%
CTCTAGGTGGATAATTTCCT+TGG + chr1_1:35184582-35184601 Msa0020240:intron 40.0%
TAGGTGGATAATTTCCTTGG+TGG + chr1_1:35184585-35184604 Msa0020240:intron 40.0%
CTAAACAGTAAACACCACCA+AGG - chr1_1:35184602-35184621 None:intergenic 40.0%
CTTCATCTACATTGTCATCC+TGG - chr1_1:35184705-35184724 None:intergenic 40.0%
CTGAAGGGTAACACAGTATT+TGG - chr1_1:35184889-35184908 None:intergenic 40.0%
CAAATACTGTGTTACCCTTC+AGG + chr1_1:35184887-35184906 Msa0020240:intron 40.0%
GTGAAGATACTTAAGGTGCA+AGG + chr1_1:35184918-35184937 Msa0020240:CDS 40.0%
!!! TTCTTTTTCAGATTGAGGCC+AGG + chr1_1:35185025-35185044 Msa0020240:intron 40.0%
!!! TCTTTTTCAGATTGAGGCCA+GGG + chr1_1:35185026-35185045 Msa0020240:intron 40.0%
TGCAATTCAAGGAGACCATT+TGG - chr1_1:35185307-35185326 None:intergenic 40.0%
TATGAACTTCTGCAAATGCC+AGG + chr1_1:35185338-35185357 Msa0020240:CDS 40.0%
GATATGTTTGTCTAGGCAAG+TGG + chr1_1:35185507-35185526 Msa0020240:intron 40.0%
TGGGAAGAAGATGGATCAAT+GGG - chr1_1:35185778-35185797 None:intergenic 40.0%
AAAGGGAAGAAAGGAGATGA+AGG - chr1_1:35185801-35185820 None:intergenic 40.0%
! ATTGCCGATTGGAGAATGAT+AGG + chr1_1:35185840-35185859 Msa0020240:intron 40.0%
GGTTCCTATCATTCTCCAAT+CGG - chr1_1:35185847-35185866 None:intergenic 40.0%
AGGAACCTGAAAGTTCAAAG+TGG + chr1_1:35185860-35185879 Msa0020240:intron 40.0%
GGAACCTGAAAGTTCAAAGT+GGG + chr1_1:35185861-35185880 Msa0020240:intron 40.0%
GAACCTGAAAGTTCAAAGTG+GGG + chr1_1:35185862-35185881 Msa0020240:intron 40.0%
ATTCCCCACTTTGAACTTTC+AGG - chr1_1:35185868-35185887 None:intergenic 40.0%
TATGTGAATGGGGAGATGAA+AGG + chr1_1:35185930-35185949 Msa0020240:intron 40.0%
ATGTGAATGGGGAGATGAAA+GGG + chr1_1:35185931-35185950 Msa0020240:intron 40.0%
TTGTTAGGAGAGTTTCTCTC+TGG + chr1_1:35186070-35186089 Msa0020240:intron 40.0%
TGAGCTTAAGAGCTCTACAA+TGG - chr1_1:35186163-35186182 None:intergenic 40.0%
GAATTTCGGGGTTCTATCAA+TGG + chr1_1:35186218-35186237 Msa0020240:intron 40.0%
!! GAGTTTGCTAAATTGCGAGA+AGG + chr1_1:35186375-35186394 Msa0020240:intron 40.0%
GAAACAGATCACGATGGAAT+TGG + chr1_1:35186462-35186481 Msa0020240:intron 40.0%
! TCCTTCTTTTCTTGCCACAA+CGG - chr1_1:35186511-35186530 None:intergenic 40.0%
TGTGGCAAGAAAAGAAGGAA+TGG + chr1_1:35186512-35186531 Msa0020240:intron 40.0%
TTCACGATTTGTGTCTTCTC+CGG - chr1_1:35186570-35186589 None:intergenic 40.0%
TTCGTTAATACTTCTGCTCC+TGG - chr1_1:35186606-35186625 None:intergenic 40.0%
AATACAACGAAACAGGACGA+AGG + chr1_1:35186627-35186646 Msa0020240:intron 40.0%
ACGAAATCCAACTCTGTTGA+AGG + chr1_1:35186683-35186702 Msa0020240:intron 40.0%
AAATCCAACTCTGTTGAAGG+AGG + chr1_1:35186686-35186705 Msa0020240:intron 40.0%
AGGATGAGAGATTACGAAAG+AGG + chr1_1:35186709-35186728 Msa0020240:intron 40.0%
! TCGAGTATCGTTAACCTGAT+GGG + chr1_1:35186918-35186937 Msa0020240:intron 40.0%
! CATGGGCTGAAATAGAGATA+AGG + chr1_1:35186982-35187001 Msa0020240:intron 40.0%
ACATTCAAAGTCCTCAGAAG+AGG + chr1_1:35187068-35187087 Msa0020240:intron 40.0%
ACATCATGGAAACCCTGTTA+TGG + chr1_1:35187172-35187191 Msa0020240:intron 40.0%
CATCATGGAAACCCTGTTAT+GGG + chr1_1:35187173-35187192 Msa0020240:intron 40.0%
CTTGAGAGACAAATAGGAAG+CGG - chr1_1:35187485-35187504 None:intergenic 40.0%
AGGAACCTGAAAGTTCAAAG+TGG + chr1_1:35185860-35185879 Msa0020240:intron 40.0%
GGAACCTGAAAGTTCAAAGT+GGG + chr1_1:35185861-35185880 Msa0020240:intron 40.0%
GAACCTGAAAGTTCAAAGTG+GGG + chr1_1:35185862-35185881 Msa0020240:intron 40.0%
ATTCCCCACTTTGAACTTTC+AGG - chr1_1:35185868-35185887 None:intergenic 40.0%
TATGTGAATGGGGAGATGAA+AGG + chr1_1:35185930-35185949 Msa0020240:intron 40.0%
ATGTGAATGGGGAGATGAAA+GGG + chr1_1:35185931-35185950 Msa0020240:intron 40.0%
TTGTTAGGAGAGTTTCTCTC+TGG + chr1_1:35186070-35186089 Msa0020240:intron 40.0%
TGAGCTTAAGAGCTCTACAA+TGG - chr1_1:35186163-35186182 None:intergenic 40.0%
! TTAGAATAGAGCTAGCTTCC+TGG + chr1_1:35188474-35188493 Msa0020240:intron 40.0%
! GATTTTGTGGAACAGGATCT+AGG + chr1_1:35188749-35188768 Msa0020240:intron 40.0%
GATAGAAAAGCTTGGGTGTA+AGG - chr1_1:35188795-35188814 None:intergenic 40.0%
CTCAACGAGATAGAAAAGCT+TGG - chr1_1:35188803-35188822 None:intergenic 40.0%
AATCTCCTTGCATGCGTTTA+TGG + chr1_1:35188925-35188944 Msa0020240:intron 40.0%
! CTTTCATCTAAAACAGCTGC+TGG + chr1_1:35189050-35189069 Msa0020240:CDS 40.0%
TCTAAATCAGCCTGAATGGA+TGG + chr1_1:35189171-35189190 Msa0020240:intron 40.0%
! TTCACCTTTGATGACTTCTG+GGG - chr1_1:35189197-35189216 None:intergenic 40.0%
! GTTCACCTTTGATGACTTCT+GGG - chr1_1:35189198-35189217 None:intergenic 40.0%
! AGTTCACCTTTGATGACTTC+TGG - chr1_1:35189199-35189218 None:intergenic 40.0%
! TCAGCTTTGGTGTAATCTTG+TGG + chr1_1:35189242-35189261 Msa0020240:CDS 40.0%
! CAGCTTTGGTGTAATCTTGT+GGG + chr1_1:35189243-35189262 Msa0020240:CDS 40.0%
CAAAATCAGCGCTCAAAAAG+AGG - chr1_1:35189385-35189404 None:intergenic 40.0%
!!! CTCTTTTTGAGCGCTGATTT+TGG + chr1_1:35189383-35189402 Msa0020240:intron 40.0%
ACTGTTAAAGAGTCCCACAT+CGG + chr1_1:35189670-35189689 Msa0020240:intron 40.0%
GACAATCTCTTATCCGATGT+GGG - chr1_1:35189686-35189705 None:intergenic 40.0%
AGACAATCTCTTATCCGATG+TGG - chr1_1:35189687-35189706 None:intergenic 40.0%
! CCCAACCACAATTTCTAAGA+TGG + chr1_1:35189771-35189790 Msa0020240:intron 40.0%
!! CCAACGAATAATTTTGGAGG+AGG - chr1_1:35189804-35189823 None:intergenic 40.0%
CCTCCTCCAAAATTATTCGT+TGG + chr1_1:35189801-35189820 Msa0020240:intron 40.0%
! GCATGAATATAAATGGTGGG+TGG - chr1_1:35189857-35189876 None:intergenic 40.0%
TCATGTGGAGGGGTTTATAT+TGG - chr1_1:35189959-35189978 None:intergenic 40.0%
ATATAAACCCCTCCACATGA+AGG + chr1_1:35189959-35189978 Msa0020240:intron 40.0%
! AAGGAGGGTATGATACTAAG+AGG + chr1_1:35189978-35189997 Msa0020240:intron 40.0%
! AGGAGGGTATGATACTAAGA+GGG + chr1_1:35189979-35189998 Msa0020240:intron 40.0%
AGGGTTGTGAGCTAGATAAA+CGG + chr1_1:35190174-35190193 Msa0020240:intron 40.0%
! TTGTGTCTTCCTTTTGTCCT+CGG - chr1_1:35190303-35190322 None:intergenic 40.0%
GATTACCACTGCTCAAATTC+AGG - chr1_1:35190329-35190348 None:intergenic 40.0%
CAGTAAGCATGAAAGGCTAA+AGG + chr1_1:35190381-35190400 Msa0020240:intron 40.0%
!!! TCCGGATGCATTTGTTTTGA+AGG + chr1_1:35190422-35190441 Msa0020240:intron 40.0%
GCCTTCAAAACAAATGCATC+CGG - chr1_1:35190426-35190445 None:intergenic 40.0%
TCCATTGTGATTCCAGTGAT+TGG + chr1_1:35190448-35190467 Msa0020240:intron 40.0%
CCATTGTGATTCCAGTGATT+GGG + chr1_1:35190449-35190468 Msa0020240:intron 40.0%
GATGTCGAAAGATGAGTTGT+TGG - chr1_1:35190535-35190554 None:intergenic 40.0%
ACAACTCATCTTTCGACATC+TGG + chr1_1:35190535-35190554 Msa0020240:intron 40.0%
!! TCAGCCCTTCTTTTGATAGT+TGG + chr1_1:35190571-35190590 Msa0020240:intron 40.0%
GCGTCCAACTATCAAAAGAA+GGG - chr1_1:35190578-35190597 None:intergenic 40.0%
TGCGTCCAACTATCAAAAGA+AGG - chr1_1:35190579-35190598 None:intergenic 40.0%
!! TCTTTTGATAGTTGGACGCA+TGG + chr1_1:35190579-35190598 Msa0020240:intron 40.0%
GTAATGATCTATGCACAGAC+GGG - chr1_1:35190881-35190900 None:intergenic 40.0%
!!! TGTTGCAGCTGTTGGTTTTA+TGG + chr1_1:35190957-35190976 Msa0020240:CDS 40.0%
!!! GTTGCAGCTGTTGGTTTTAT+GGG + chr1_1:35190958-35190977 Msa0020240:CDS 40.0%
!!! CTGTTGGTTTTATGGGCAAA+AGG + chr1_1:35190965-35190984 Msa0020240:CDS 40.0%
ATAAGGTCTCATTGAGCCAA+TGG - chr1_1:35191149-35191168 None:intergenic 40.0%
ATAACTGGTTAGAGTCTCCT+TGG - chr1_1:35191226-35191245 None:intergenic 40.0%
TAACCAGTTATGCCAACCAT+TGG + chr1_1:35191235-35191254 Msa0020240:intron 40.0%
TTTCTTACTGTAGGGAACCA+AGG + chr1_1:35191337-35191356 Msa0020240:intron 40.0%
TCCAGCTGTCAATTTCAGTT+GGG - chr1_1:35191793-35191812 None:intergenic 40.0%
TTCCAGCTGTCAATTTCAGT+TGG - chr1_1:35191794-35191813 None:intergenic 40.0%
AATTAAGTGGCTCACCTTCA+TGG + chr1_1:35191848-35191867 Msa0020240:intron 40.0%
ACCATATAAACACGCATTGC+GGG - chr1_1:35191954-35191973 None:intergenic 40.0%
ATCACTGAAAAACACAAGGG+TGG + chr1_1:35192078-35192097 Msa0020240:intron 40.0%
TATTGCTTGGCTTAGGAGTT+AGG - chr1_1:35192195-35192214 None:intergenic 40.0%
! TAGTTGGGGTACTTAATTGG+AGG - chr1_1:35192249-35192268 None:intergenic 40.0%
GGGAGTTAAGTTTGCGAAAG+AGG + chr1_1:35176453-35176472 Msa0020240:five_prime_UTR 45.0%
TTGTTTGAGCGAGCTGAGAT+AGG + chr1_1:35176480-35176499 Msa0020240:five_prime_UTR 45.0%
CTGAGATAGGAAATGTACGG+CGG + chr1_1:35176493-35176512 Msa0020240:exon 45.0%
TGCTCAATCCAATCGCTTCT+TGG + chr1_1:35176690-35176709 Msa0020240:CDS 45.0%
AGAAGAAGAAGGAGAAGGAG+AGG - chr1_1:35176731-35176750 None:intergenic 45.0%
ACCGGTGTGAAAGTGATTGA+GGG - chr1_1:35176768-35176787 None:intergenic 45.0%
AACCGGTGTGAAAGTGATTG+AGG - chr1_1:35176769-35176788 None:intergenic 45.0%
ACAAGATACACACCACGTAC+CGG + chr1_1:35177147-35177166 Msa0020240:intron 45.0%
!!! GGTTGTGCTCACTTTTTCTG+TGG + chr1_1:35177168-35177187 Msa0020240:intron 45.0%
TTAGCAGTTCTCTCAAGGCA+GGG - chr1_1:35177620-35177639 None:intergenic 45.0%
CCTTGAGAGAACTGCTAACT+GGG + chr1_1:35177622-35177641 Msa0020240:CDS 45.0%
CTTGAGAGAACTGCTAACTG+GGG + chr1_1:35177623-35177642 Msa0020240:CDS 45.0%
! CTGATCAGTTGCAGCTTTGA+TGG - chr1_1:35177676-35177695 None:intergenic 45.0%
! CGCACCTAAATTTTCCTCGT+CGG - chr1_1:35177827-35177846 None:intergenic 45.0%
CCAATGGGTAAGCTTCCAAT+TGG - chr1_1:35177904-35177923 None:intergenic 45.0%
CCAATTGGAAGCTTACCCAT+TGG + chr1_1:35177901-35177920 Msa0020240:CDS 45.0%
GTGACCAGTCCATTAAACTG+CGG - chr1_1:35178541-35178560 None:intergenic 45.0%
TAGCAAGCGTGTAACTTCCA+TGG - chr1_1:35178657-35178676 None:intergenic 45.0%
ATGGAAGTTACACGCTTGCT+AGG + chr1_1:35178656-35178675 Msa0020240:intron 45.0%
CCATGTGTGCATCTCATAGT+GGG - chr1_1:35178685-35178704 None:intergenic 45.0%
ACCATGTGTGCATCTCATAG+TGG - chr1_1:35178686-35178705 None:intergenic 45.0%
TGGACAGTAGCACCAATTCT+TGG - chr1_1:35178950-35178969 None:intergenic 45.0%
CTTAGCTGGAGAGTTGAAAG+AGG + chr1_1:35178977-35178996 Msa0020240:intron 45.0%
TAGCTGGAGAGTTGAAAGAG+GGG + chr1_1:35178979-35178998 Msa0020240:intron 45.0%
CTAGGAACCCAGTAATTGGA+TGG + chr1_1:35179092-35179111 Msa0020240:intron 45.0%
AGGAGAGAATCTCTCTTCCA+AGG + chr1_1:35179154-35179173 Msa0020240:intron 45.0%
GGAGAGAATCTCTCTTCCAA+GGG + chr1_1:35179155-35179174 Msa0020240:intron 45.0%
AATTGTGAAGGGGAAACCCT+TGG - chr1_1:35179174-35179193 None:intergenic 45.0%
AGGCTAATGAGGAGCTAACT+AGG - chr1_1:35179223-35179242 None:intergenic 45.0%
!!! CGACACTCATTTTGAAACGG+AGG - chr1_1:35179850-35179869 None:intergenic 45.0%
GATTCAAGACTCAAGAGCCT+TGG + chr1_1:35180185-35180204 Msa0020240:intron 45.0%
! TAGAGAGTCATTGATTGGGC+AGG - chr1_1:35180216-35180235 None:intergenic 45.0%
TTGATTTAGTAGGAAGGCCC+GGG + chr1_1:35180455-35180474 Msa0020240:CDS 45.0%
!! GTTTCAACTGGCTTGAACCT+TGG - chr1_1:35180550-35180569 None:intergenic 45.0%
CTTGTGTTTGATACCACGTC+AGG + chr1_1:35180628-35180647 Msa0020240:CDS 45.0%
CAGGTGATGAAGACTGACAA+GGG - chr1_1:35180779-35180798 None:intergenic 45.0%
CTTGTCAGTCTTCATCACCT+GGG + chr1_1:35180778-35180797 Msa0020240:intron 45.0%
TTCTTAGTAACTGGGACCAG+CGG + chr1_1:35181172-35181191 Msa0020240:intron 45.0%
!! CCTTACAAGCCGGTTTTGTA+AGG - chr1_1:35181458-35181477 None:intergenic 45.0%
!! CCTTACAAAACCGGCTTGTA+AGG + chr1_1:35181455-35181474 Msa0020240:intron 45.0%
!! AAAACCGGCTTGTAAGGTGA+GGG + chr1_1:35181461-35181480 Msa0020240:intron 45.0%
GCTCGACCCAAAATTCTAAG+AGG - chr1_1:35181506-35181525 None:intergenic 45.0%
!! CCTTACAAGCCGGTTTTGTA+AGG - chr1_1:35181458-35181477 None:intergenic 45.0%
!! CCTTACAAAACCGGCTTGTA+AGG + chr1_1:35181455-35181474 Msa0020240:intron 45.0%
TCTAGATATCCACTCCTGGA+CGG - chr1_1:35181633-35181652 None:intergenic 45.0%
GCTATCAGGTTACCACTATC+GGG - chr1_1:35181671-35181690 None:intergenic 45.0%
! TGCACGCTCTTTGGTCATTT+TGG + chr1_1:35181994-35182013 Msa0020240:intron 45.0%
ATGCAGCGTGATCCTTGATA+CGG + chr1_1:35182112-35182131 Msa0020240:intron 45.0%
!! CAGGAGGTACTGTTGATTGT+AGG + chr1_1:35182248-35182267 Msa0020240:intron 45.0%
! TTTGGTGCAAACTATGCTGG+TGG + chr1_1:35182301-35182320 Msa0020240:CDS 45.0%
TTGGTGCAAACTATGCTGGT+GGG + chr1_1:35182302-35182321 Msa0020240:CDS 45.0%
! GTTTTCTGTCTTAATGGCGC+TGG + chr1_1:35182467-35182486 Msa0020240:intron 45.0%
ATGCCATCTCATTTAGGTCC+TGG + chr1_1:35182506-35182525 Msa0020240:intron 45.0%
GTACCAGGACCTAAATGAGA+TGG - chr1_1:35182512-35182531 None:intergenic 45.0%
GAGTCATGAAGTTGACCTTG+AGG + chr1_1:35182583-35182602 Msa0020240:CDS 45.0%
TCATGAAGTTGACCTTGAGG+AGG + chr1_1:35182586-35182605 Msa0020240:CDS 45.0%
TTGAAGGAGAACATTGGGAC+AGG + chr1_1:35182641-35182660 Msa0020240:CDS 45.0%
TTCACTCTTTCCCATGAGAG+AGG + chr1_1:35183178-35183197 Msa0020240:intron 45.0%
ATTCAGGCATCTCTTAGCAG+AGG - chr1_1:35183289-35183308 None:intergenic 45.0%
GACCAAGTGTTTATCAAGGC+AGG + chr1_1:35183570-35183589 Msa0020240:intron 45.0%
CCAAGTGTTTATCAAGGCAG+GGG + chr1_1:35183572-35183591 Msa0020240:intron 45.0%
ATACTTTGCATAAGAGGGGG+AGG + chr1_1:35183674-35183693 Msa0020240:intron 45.0%
TACTTTGCATAAGAGGGGGA+GGG + chr1_1:35183675-35183694 Msa0020240:intron 45.0%
CAAATTTATCTTGCGGGGGA+AGG + chr1_1:35183754-35183773 Msa0020240:intron 45.0%
ACGTTACCTTTGCCATTGCT+TGG + chr1_1:35183826-35183845 Msa0020240:intron 45.0%
TCGCTATATGTCGATCTCCT+AGG + chr1_1:35183935-35183954 Msa0020240:intron 45.0%
CATGGACATGCCTTCTACTA+AGG - chr1_1:35183988-35184007 None:intergenic 45.0%
! CTTAGTAGAAGGCATGTCCA+TGG + chr1_1:35183986-35184005 Msa0020240:intron 45.0%
ATGAGGATTGCGATGGAAAG+AGG + chr1_1:35184172-35184191 Msa0020240:intron 45.0%
GTATTTAGGAGAGGATGTCC+AGG + chr1_1:35184684-35184703 Msa0020240:intron 45.0%
TTATGCTGTCCTTTCTGCGT+TGG + chr1_1:35184836-35184855 Msa0020240:intron 45.0%
TAACCTCAACCAACGCAGAA+AGG - chr1_1:35184848-35184867 None:intergenic 45.0%
!! TCTGCGTTGGTTGAGGTTAT+AGG + chr1_1:35184849-35184868 Msa0020240:intron 45.0%
!! CTGCGTTGGTTGAGGTTATA+GGG + chr1_1:35184850-35184869 Msa0020240:intron 45.0%
CTTCACAGCAACATCCTGAA+GGG - chr1_1:35184904-35184923 None:intergenic 45.0%
TCTTCACAGCAACATCCTGA+AGG - chr1_1:35184905-35184924 None:intergenic 45.0%
ATGGTCTCCTTGAATTGCAG+AGG + chr1_1:35185308-35185327 Msa0020240:intron 45.0%
CAAGCTTCCTCTGCAATTCA+AGG - chr1_1:35185318-35185337 None:intergenic 45.0%
TTGATTGAGGAACCAACACC+TGG - chr1_1:35185359-35185378 None:intergenic 45.0%
GTGGGAAGAAGATGGATCAA+TGG - chr1_1:35185779-35185798 None:intergenic 45.0%
AGATGAAGGTGGGAAGAAGA+TGG - chr1_1:35185787-35185806 None:intergenic 45.0%
GGAAGAAAGGAGATGAAGGT+GGG - chr1_1:35185797-35185816 None:intergenic 45.0%
TGTGAATGGGGAGATGAAAG+GGG + chr1_1:35185932-35185951 Msa0020240:intron 45.0%
ACTAGCTCCTCTCGATAATC+CGG - chr1_1:35186253-35186272 None:intergenic 45.0%
TGTCCAAATGTCTCGATCTG+TGG + chr1_1:35186286-35186305 Msa0020240:intron 45.0%
GTCCAAATGTCTCGATCTGT+GGG + chr1_1:35186287-35186306 Msa0020240:intron 45.0%
TTCCCACAGATCGAGACATT+TGG - chr1_1:35186292-35186311 None:intergenic 45.0%
TCTCGATCTGTGGGAATTTG+AGG + chr1_1:35186296-35186315 Msa0020240:intron 45.0%
! TTGAGGCGCTTGAAAATGTC+TGG + chr1_1:35186313-35186332 Msa0020240:intron 45.0%
TCAAACTCTCTGTACCGTTG+TGG + chr1_1:35186494-35186513 Msa0020240:intron 45.0%
ACCGTTGTGGCAAGAAAAGA+AGG + chr1_1:35186507-35186526 Msa0020240:intron 45.0%
AAAGAAGGAATGGTCGTGTC+TGG + chr1_1:35186522-35186541 Msa0020240:intron 45.0%
! GTGAACCACATTTTACGACC+AGG + chr1_1:35186585-35186604 Msa0020240:intron 45.0%
! GGGGGTATGAATGTAACAGA+AGG - chr1_1:35186747-35186766 None:intergenic 45.0%
!!! AACATCTGGTGGTTTTGGTG+GGG - chr1_1:35186766-35186785 None:intergenic 45.0%
!!! CAACATCTGGTGGTTTTGGT+GGG - chr1_1:35186767-35186786 None:intergenic 45.0%
!!! TCAACATCTGGTGGTTTTGG+TGG - chr1_1:35186768-35186787 None:intergenic 45.0%
! GGTTCAACATCTGGTGGTTT+TGG - chr1_1:35186771-35186790 None:intergenic 45.0%
! GTCGAGTATCGTTAACCTGA+TGG + chr1_1:35186917-35186936 Msa0020240:intron 45.0%
AGATAAGGGAGCTAGTCCAA+TGG + chr1_1:35186997-35187016 Msa0020240:intron 45.0%
GATAAGGGAGCTAGTCCAAT+GGG + chr1_1:35186998-35187017 Msa0020240:intron 45.0%
GGTATAAAAGCCGGACATCA+TGG + chr1_1:35187158-35187177 Msa0020240:intron 45.0%
AACAGGGTTTCCATGATGTC+CGG - chr1_1:35187171-35187190 None:intergenic 45.0%
CCAAGAGACTTCCCATAACA+GGG - chr1_1:35187187-35187206 None:intergenic 45.0%
AGGGATTTCAAAACCACCAC+TGG - chr1_1:35187228-35187247 None:intergenic 45.0%
!!! GTGGTGGTTTTGAAATCCCT+TGG + chr1_1:35187228-35187247 Msa0020240:intron 45.0%
GAAGACATGTAATCAGGGGT+TGG + chr1_1:35187334-35187353 Msa0020240:intron 45.0%
GGAAATCACTTCCAACCTTG+AGG + chr1_1:35187542-35187561 Msa0020240:intron 45.0%
AACAACCTTGTCCTCAAGGT+TGG - chr1_1:35187556-35187575 None:intergenic 45.0%
TGTGAATGGGGAGATGAAAG+GGG + chr1_1:35185932-35185951 Msa0020240:intron 45.0%
AAAGAGAGGTAAATGGGCGT+GGG + chr1_1:35188098-35188117 Msa0020240:intron 45.0%
TCTAGGTGGAAAACTGGTCA+TGG - chr1_1:35188618-35188637 None:intergenic 45.0%
AGGCTGCTGGTATAAATTGC+AGG - chr1_1:35188775-35188794 None:intergenic 45.0%
GCATGCAAGGAGATTGTACA+AGG - chr1_1:35188920-35188939 None:intergenic 45.0%
CCAAAGTCACATACCTGAGT+TGG - chr1_1:35189002-35189021 None:intergenic 45.0%
CCAACTCAGGTATGTGACTT+TGG + chr1_1:35188999-35189018 Msa0020240:intron 45.0%
! CTTTGGCCTTTCACGTACAA+AGG + chr1_1:35189016-35189035 Msa0020240:CDS 45.0%
TGGTGTAATCTTGTGGGAAC+TGG + chr1_1:35189249-35189268 Msa0020240:CDS 45.0%
GAAGGATTTAACTGCCTCCA+TGG - chr1_1:35189289-35189308 None:intergenic 45.0%
GAGGCAGTTAAATCCTTCAC+AGG + chr1_1:35189291-35189310 Msa0020240:CDS 45.0%
GAAATCTTCACCTCAGAAGC+TGG + chr1_1:35189729-35189748 Msa0020240:intron 45.0%
!!! ACCTCAGAAGCTGGTTTTGT+GGG + chr1_1:35189738-35189757 Msa0020240:intron 45.0%
! GGCCCAACGAATAATTTTGG+AGG - chr1_1:35189807-35189826 None:intergenic 45.0%
! GGTGGCCCAACGAATAATTT+TGG - chr1_1:35189810-35189829 None:intergenic 45.0%
TGCTATCAGGTTTCCGCTAT+CGG + chr1_1:35189830-35189849 Msa0020240:intron 45.0%
! TTTTAACATACGCCCAGGAC+TGG - chr1_1:35189889-35189908 None:intergenic 45.0%
! GACTCTTTTAACATACGCCC+AGG - chr1_1:35189894-35189913 None:intergenic 45.0%
GTATCATACCCTCCTTCATG+TGG - chr1_1:35189974-35189993 None:intergenic 45.0%
CATGAATCCTAGTAGGAGAG+AGG + chr1_1:35190032-35190051 Msa0020240:intron 45.0%
CTTCTACATGTACCAGCTCA+GGG - chr1_1:35190078-35190097 None:intergenic 45.0%
TCTTCTACATGTACCAGCTC+AGG - chr1_1:35190079-35190098 None:intergenic 45.0%
!! TTCATGTGTCTGGTTCTGCA+TGG + chr1_1:35190146-35190165 Msa0020240:intron 45.0%
CACGTAGAAAATCTCAGGAG+TGG + chr1_1:35190216-35190235 Msa0020240:intron 45.0%
AGGAGTGGCATAAACAAGAG+AGG + chr1_1:35190231-35190250 Msa0020240:intron 45.0%
GTAGTCCAGGAAACAGTATG+TGG - chr1_1:35190281-35190300 None:intergenic 45.0%
AAGCACCTGAATTTGAGCAG+TGG + chr1_1:35190321-35190340 Msa0020240:intron 45.0%
GCAGTGGTAATCACTCATCA+TGG + chr1_1:35190337-35190356 Msa0020240:intron 45.0%
CCCAATCACTGGAATCACAA+TGG - chr1_1:35190452-35190471 None:intergenic 45.0%
CCAAATCTTGTCCCAATCAC+TGG - chr1_1:35190463-35190482 None:intergenic 45.0%
CCAGTGATTGGGACAAGATT+TGG + chr1_1:35190460-35190479 Msa0020240:intron 45.0%
GTATAGGTTGTTGCAGCTGT+TGG + chr1_1:35190949-35190968 Msa0020240:intron 45.0%
GCAAAAGGCTAGAAATTCCG+AGG + chr1_1:35190980-35190999 Msa0020240:CDS 45.0%
ACTTGAGGATTCACATGCCT+CGG - chr1_1:35191000-35191019 None:intergenic 45.0%
TCAATTAAGGCAGCCACTTG+AGG - chr1_1:35191015-35191034 None:intergenic 45.0%
AGACCAGCAGAGCTCAATTA+AGG - chr1_1:35191028-35191047 None:intergenic 45.0%
CAACTCATTAACAATGGCCG+TGG + chr1_1:35191184-35191203 Msa0020240:intron 45.0%
TCATTAACAATGGCCGTGGT+GGG + chr1_1:35191188-35191207 Msa0020240:intron 45.0%
! TTCCCAGCTCTTGTTCCTTT+TGG + chr1_1:35191728-35191747 Msa0020240:intron 45.0%
! TCCCAGCTCTTGTTCCTTTT+GGG + chr1_1:35191729-35191748 Msa0020240:intron 45.0%
ACCCAAAAGGAACAAGAGCT+GGG - chr1_1:35191733-35191752 None:intergenic 45.0%
ACCCAACTGAAATTGACAGC+TGG + chr1_1:35191789-35191808 Msa0020240:intron 45.0%
ACAGCTGGAATAGTTAACCC+AGG + chr1_1:35191804-35191823 Msa0020240:intron 45.0%
GGCTGCCCATTTAACAACAT+TGG - chr1_1:35191875-35191894 None:intergenic 45.0%
TGTTGTTAAATGGGCAGCCA+TGG + chr1_1:35191876-35191895 Msa0020240:intron 45.0%
TATCTCACTCCATTCTGCCA+TGG - chr1_1:35191896-35191915 None:intergenic 45.0%
ACCATCCTAGCTATTCGTGA+AGG + chr1_1:35191924-35191943 Msa0020240:intron 45.0%
CCATCCTAGCTATTCGTGAA+GGG + chr1_1:35191925-35191944 Msa0020240:intron 45.0%
ATGGCAGATTGCGGAATAAC+AGG - chr1_1:35191990-35192009 None:intergenic 45.0%
TGAATTCCCAACCAAAGCCT+AGG + chr1_1:35192158-35192177 Msa0020240:intron 45.0%
GAATTCCCAACCAAAGCCTA+GGG + chr1_1:35192159-35192178 Msa0020240:intron 45.0%
! ATTTTATGCAAAACGGGGGG+TGG - chr1_1:35192314-35192333 None:intergenic 45.0%
GCTGAAGAGCTGAATTACTC+TGG + chr1_1:35192423-35192442 Msa0020240:three_prime_UTR 45.0%
GAAGAGCTGAATTACTCTGG+TGG + chr1_1:35192426-35192445 Msa0020240:three_prime_UTR 45.0%
!!! TTTTAAATAAAATAATTATC+AGG + chr1_1:35180679-35180698 Msa0020240:intron 5.0%
!!! AAATAATTTAGAATATATAA+AGG + chr1_1:35182147-35182166 Msa0020240:intron 5.0%
!! ATTATATTATTGAATATAAT+TGG - chr1_1:35186187-35186206 None:intergenic 5.0%
!! ATTATATTATTGAATATAAT+TGG - chr1_1:35186187-35186206 None:intergenic 5.0%
!! AATTAGATAATAAATTATTA+AGG + chr1_1:35189609-35189628 Msa0020240:intron 5.0%
!! ATTAGATAATAAATTATTAA+GGG + chr1_1:35189610-35189629 Msa0020240:intron 5.0%
!! ATATTATATATAACATTAAA+AGG - chr1_1:35192474-35192493 None:intergenic 5.0%
AGATAGGAAATGTACGGCGG+TGG + chr1_1:35176496-35176515 Msa0020240:exon 50.0%
AGAAGAAGGAGAAGGAGAGG+AGG - chr1_1:35176728-35176747 None:intergenic 50.0%
CCGGTGTGAAAGTGATTGAG+GGG - chr1_1:35176767-35176786 None:intergenic 50.0%
CCCCTCAATCACTTTCACAC+CGG + chr1_1:35176764-35176783 Msa0020240:CDS 50.0%
GTTAGCAGTTCTCTCAAGGC+AGG - chr1_1:35177621-35177640 None:intergenic 50.0%
GCCTTGAGAGAACTGCTAAC+TGG + chr1_1:35177621-35177640 Msa0020240:CDS 50.0%
CCCAGTTAGCAGTTCTCTCA+AGG - chr1_1:35177625-35177644 None:intergenic 50.0%
AGGAAAATTTAGGTGCGCGC+TGG + chr1_1:35177830-35177849 Msa0020240:CDS 50.0%
AAATTTAGGTGCGCGCTGGA+AGG + chr1_1:35177834-35177853 Msa0020240:CDS 50.0%
CGATGGACACAAAGGCCAAT+GGG - chr1_1:35177919-35177938 None:intergenic 50.0%
TCGATGGACACAAAGGCCAA+TGG - chr1_1:35177920-35177939 None:intergenic 50.0%
GCAATGCTCGATGGACACAA+AGG - chr1_1:35177927-35177946 None:intergenic 50.0%
CTACCGTGTCGAATCGCTAA+GGG + chr1_1:35178247-35178266 Msa0020240:CDS 50.0%
CATCCCTTAGCGATTCGACA+CGG - chr1_1:35178253-35178272 None:intergenic 50.0%
TTTGCGACTTTGTGTGTGGG+TGG + chr1_1:35178382-35178401 Msa0020240:intron 50.0%
TTGCGACTTTGTGTGTGGGT+GGG + chr1_1:35178383-35178402 Msa0020240:intron 50.0%
TGGTCACACTGTGAAGCTGT+GGG + chr1_1:35178554-35178573 Msa0020240:intron 50.0%
GAAGCTGTGGGAGTGAGTAA+TGG + chr1_1:35178566-35178585 Msa0020240:intron 50.0%
AAGCGTGTAACTTCCATGGC+AGG - chr1_1:35178653-35178672 None:intergenic 50.0%
CCCACTATGAGATGCACACA+TGG + chr1_1:35178682-35178701 Msa0020240:intron 50.0%
CTGTCCATGCTTAGCTTAGC+TGG + chr1_1:35178963-35178982 Msa0020240:intron 50.0%
CTCTCCAGCTAAGCTAAGCA+TGG - chr1_1:35178970-35178989 None:intergenic 50.0%
CTCCTAACAAAGACGGAAGG+CGG + chr1_1:35179286-35179305 Msa0020240:intron 50.0%
TGATTTAGTAGGAAGGCCCG+GGG + chr1_1:35180456-35180475 Msa0020240:CDS 50.0%
!! ATCAGGTTGGCATGTATCCC+CGG - chr1_1:35180476-35180495 None:intergenic 50.0%
GCAAAGGAAACAACCTGACG+TGG - chr1_1:35180644-35180663 None:intergenic 50.0%
! GGTTGTTTCCTTTGCCCTTC+TGG + chr1_1:35180649-35180668 Msa0020240:intron 50.0%
!! AAAGGCATCCAGAAGGGCAA+AGG - chr1_1:35180660-35180679 None:intergenic 50.0%
CCAGGTGATGAAGACTGACA+AGG - chr1_1:35180780-35180799 None:intergenic 50.0%
CCTTGTCAGTCTTCATCACC+TGG + chr1_1:35180777-35180796 Msa0020240:intron 50.0%
!! CAAAACCGGCTTGTAAGGTG+AGG + chr1_1:35181460-35181479 Msa0020240:intron 50.0%
!! AAAACCGGCTTGTAAGGCGA+GGG + chr1_1:35181541-35181560 Msa0020240:intron 50.0%
! ACGCTCTAGATATCCACTCC+TGG - chr1_1:35181637-35181656 None:intergenic 50.0%
GTTACCACTATCGGGTCACT+CGG - chr1_1:35181663-35181682 None:intergenic 50.0%
AGTGGTAACCTGATAGCACG+TGG + chr1_1:35181674-35181693 Msa0020240:intron 50.0%
CGTGATCCTTGATACGGCAT+AGG + chr1_1:35182118-35182137 Msa0020240:intron 50.0%
GCTGGTGGGAACAACCATAT+AGG + chr1_1:35182316-35182335 Msa0020240:CDS 50.0%
TCATTTAGGTCCTGGTACCG+AGG + chr1_1:35182514-35182533 Msa0020240:intron 50.0%
TGAAGTTGACCTTGAGGAGG+AGG + chr1_1:35182589-35182608 Msa0020240:CDS 50.0%
TATCCAGATCCTCCTCCTCA+AGG - chr1_1:35182601-35182620 None:intergenic 50.0%
AGGAGGATCTGGATATTCCG+TGG + chr1_1:35182606-35182625 Msa0020240:CDS 50.0%
CCCCTGCCTTGATAAACACT+TGG - chr1_1:35183575-35183594 None:intergenic 50.0%
ACTTTGCATAAGAGGGGGAG+GGG + chr1_1:35183676-35183695 Msa0020240:intron 50.0%
TTACACTACCCTCCCCTCAT+AGG - chr1_1:35183716-35183735 None:intergenic 50.0%
!! ACACTTGCTTCAAGTTGCCC+AGG - chr1_1:35184319-35184338 None:intergenic 50.0%
!! TGTCCTTTCTGCGTTGGTTG+AGG + chr1_1:35184842-35184861 Msa0020240:intron 50.0%
TTCAGATTGAGGCCAGGGAA+TGG + chr1_1:35185031-35185050 Msa0020240:intron 50.0%
CTTCTGCAAATGCCAGGTGT+TGG + chr1_1:35185344-35185363 Msa0020240:CDS 50.0%
GGGAAGAAAGGAGATGAAGG+TGG - chr1_1:35185798-35185817 None:intergenic 50.0%
GGAGAGTTTCTCTCTGGTCT+AGG + chr1_1:35186076-35186095 Msa0020240:intron 50.0%
CTATCAATGGTCCGACCTAC+CGG + chr1_1:35186231-35186250 Msa0020240:intron 50.0%
CTCTCGATAATCCGGTAGGT+CGG - chr1_1:35186245-35186264 None:intergenic 50.0%
CTGCTCCTGGTCGTAAAATG+TGG - chr1_1:35186593-35186612 None:intergenic 50.0%
ACAACGAAACAGGACGAAGG+AGG + chr1_1:35186630-35186649 Msa0020240:intron 50.0%
TCCAACTCTGTTGAAGGAGG+AGG + chr1_1:35186689-35186708 Msa0020240:intron 50.0%
TCCTCCTCCTTCAACAGAGT+TGG - chr1_1:35186693-35186712 None:intergenic 50.0%
!!! ACATCTGGTGGTTTTGGTGG+GGG - chr1_1:35186765-35186784 None:intergenic 50.0%
! TATCGTTAACCTGATGGGCC+AGG + chr1_1:35186923-35186942 Msa0020240:intron 50.0%
! ATCGTTAACCTGATGGGCCA+GGG + chr1_1:35186924-35186943 Msa0020240:intron 50.0%
AGCTAGTCCAATGGGAGACA+TGG + chr1_1:35187006-35187025 Msa0020240:intron 50.0%
CCTTCTTCCATGTCTCCCAT+TGG - chr1_1:35187016-35187035 None:intergenic 50.0%
CCAATGGGAGACATGGAAGA+AGG + chr1_1:35187013-35187032 Msa0020240:intron 50.0%
CCCTGTTATGGGAAGTCTCT+TGG + chr1_1:35187184-35187203 Msa0020240:intron 50.0%
GCCAAGAGACTTCCCATAAC+AGG - chr1_1:35187188-35187207 None:intergenic 50.0%
ACTGGTCACTACGATGGTAC+TGG - chr1_1:35187210-35187229 None:intergenic 50.0%
AGTACCATCGTAGTGACCAG+TGG + chr1_1:35187209-35187228 Msa0020240:intron 50.0%
!! GGTGGTGTCGGCAATAGAAA+TGG + chr1_1:35187263-35187282 Msa0020240:intron 50.0%
CACTTCCAACCTTGAGGACA+AGG + chr1_1:35187548-35187567 Msa0020240:intron 50.0%
GGAGAGTTTCTCTCTGGTCT+AGG + chr1_1:35186076-35186095 Msa0020240:intron 50.0%
GAAAGAGAGGTAAATGGGCG+TGG + chr1_1:35188097-35188116 Msa0020240:intron 50.0%
GGTCATGGAGGAGCAAGATA+TGG - chr1_1:35188603-35188622 None:intergenic 50.0%
AGGTGGAAAACTGGTCATGG+AGG - chr1_1:35188615-35188634 None:intergenic 50.0%
ATGGCCCCAGAAGTCATCAA+AGG + chr1_1:35189190-35189209 Msa0020240:CDS 50.0%
TGGTGACCCTTCAACAACCA+TGG + chr1_1:35189269-35189288 Msa0020240:CDS 50.0%
TGACCCTTCAACAACCATGG+AGG + chr1_1:35189272-35189291 Msa0020240:CDS 50.0%
CTGCCTCCATGGTTGTTGAA+GGG - chr1_1:35189278-35189297 None:intergenic 50.0%
ACTGCCTCCATGGTTGTTGA+AGG - chr1_1:35189279-35189298 None:intergenic 50.0%
!!! CACCTCAGAAGCTGGTTTTG+TGG + chr1_1:35189737-35189756 Msa0020240:intron 50.0%
ACCCACAAAACCAGCTTCTG+AGG - chr1_1:35189742-35189761 None:intergenic 50.0%
!! GATAGCGGAAACCTGATAGC+AGG - chr1_1:35189831-35189850 None:intergenic 50.0%
GCTATCAGGTTTCCGCTATC+GGG + chr1_1:35189831-35189850 Msa0020240:intron 50.0%
TAAACCCCTCCACATGAAGG+AGG + chr1_1:35189962-35189981 Msa0020240:intron 50.0%
AAACCCCTCCACATGAAGGA+GGG + chr1_1:35189963-35189982 Msa0020240:intron 50.0%
ATACCCTCCTTCATGTGGAG+GGG - chr1_1:35189969-35189988 None:intergenic 50.0%
CATACCCTCCTTCATGTGGA+GGG - chr1_1:35189970-35189989 None:intergenic 50.0%
TCATACCCTCCTTCATGTGG+AGG - chr1_1:35189971-35189990 None:intergenic 50.0%
AGGTCCCAAGTGAGACACAT+TGG + chr1_1:35190052-35190071 Msa0020240:intron 50.0%
AGGGCCAATGTGTCTCACTT+GGG - chr1_1:35190059-35190078 None:intergenic 50.0%
AGGTCCTATCTCTGCTTGAC+TGG + chr1_1:35190251-35190270 Msa0020240:intron 50.0%
GGTCCTATCTCTGCTTGACT+GGG + chr1_1:35190252-35190271 Msa0020240:intron 50.0%
TTGCCCAGTCAAGCAGAGAT+AGG - chr1_1:35190258-35190277 None:intergenic 50.0%
GGCAACCACATACTGTTTCC+TGG + chr1_1:35190273-35190292 Msa0020240:intron 50.0%
TACTGTTTCCTGGACTACCG+AGG + chr1_1:35190283-35190302 Msa0020240:intron 50.0%
CTGCGAGCAATATGAGAGTC+CGG + chr1_1:35190404-35190423 Msa0020240:intron 50.0%
TATGCACAGACGGGATAGTG+AGG - chr1_1:35190872-35190891 None:intergenic 50.0%
GAGGCATGTGAATCCTCAAG+TGG + chr1_1:35190999-35191018 Msa0020240:CDS 50.0%
CTGCCTTAATTGAGCTCTGC+TGG + chr1_1:35191022-35191041 Msa0020240:CDS 50.0%
CTCATTAACAATGGCCGTGG+TGG + chr1_1:35191187-35191206 Msa0020240:intron 50.0%
GTGGGATTTGAATCCCACCA+CGG - chr1_1:35191204-35191223 None:intergenic 50.0%
GTGGGATTCAAATCCCACCA+AGG + chr1_1:35191206-35191225 Msa0020240:intron 50.0%
CTGGTTAGAGTCTCCTTGGT+GGG - chr1_1:35191222-35191241 None:intergenic 50.0%
ACTGGTTAGAGTCTCCTTGG+TGG - chr1_1:35191223-35191242 None:intergenic 50.0%
TGGCCAATGGTTGGCATAAC+TGG - chr1_1:35191241-35191260 None:intergenic 50.0%
CTTACTGTAGGGAACCAAGG+AGG + chr1_1:35191340-35191359 Msa0020240:intron 50.0%
GACCCAAAAGGAACAAGAGC+TGG - chr1_1:35191734-35191753 None:intergenic 50.0%
CCCTTCACGAATAGCTAGGA+TGG - chr1_1:35191928-35191947 None:intergenic 50.0%
GCATCCCTTCACGAATAGCT+AGG - chr1_1:35191932-35191951 None:intergenic 50.0%
GCCCGCAATGCGTGTTTATA+TGG + chr1_1:35191950-35191969 Msa0020240:intron 50.0%
GCAGATTGCGGAATAACAGG+TGG - chr1_1:35191987-35192006 None:intergenic 50.0%
! GGCTTTGGTTGGGAATTCAG+AGG - chr1_1:35192157-35192176 None:intergenic 50.0%
GAAGGAGAAGGAGAGGAGGT+AGG - chr1_1:35176724-35176743 None:intergenic 55.0%
AAGTGAGCACAACCGGTACG+TGG - chr1_1:35177162-35177181 None:intergenic 55.0%
CCTTAGCGATTCGACACGGT+AGG - chr1_1:35178249-35178268 None:intergenic 55.0%
CCTACCGTGTCGAATCGCTA+AGG + chr1_1:35178246-35178265 Msa0020240:CDS 55.0%
GACTTTGTGTGTGGGTGGGT+CGG + chr1_1:35178387-35178406 Msa0020240:intron 55.0%
ACTTTGTGTGTGGGTGGGTC+GGG + chr1_1:35178388-35178407 Msa0020240:intron 55.0%
CTGGTCACACTGTGAAGCTG+TGG + chr1_1:35178553-35178572 Msa0020240:intron 55.0%
TTTGCCAGACAGACCTGCCA+TGG + chr1_1:35178637-35178656 Msa0020240:intron 55.0%
ACTTCCATGGCAGGTCTGTC+TGG - chr1_1:35178644-35178663 None:intergenic 55.0%
CTAACAAAGACGGAAGGCGG+CGG + chr1_1:35179289-35179308 Msa0020240:intron 55.0%
TAACAAAGACGGAAGGCGGC+GGG + chr1_1:35179290-35179309 Msa0020240:intron 55.0%
TGATTGGGCAGGAGAGACCA+AGG - chr1_1:35180205-35180224 None:intergenic 55.0%
!! TCAGGTTGGCATGTATCCCC+GGG - chr1_1:35180475-35180494 None:intergenic 55.0%
GAAGCCCTCACCTTACAAGC+CGG - chr1_1:35181468-35181487 None:intergenic 55.0%
!! CAAAACCGGCTTGTAAGGCG+AGG + chr1_1:35181540-35181559 Msa0020240:intron 55.0%
! TTTTAACACCCCCACCGTCC+AGG + chr1_1:35181616-35181635 Msa0020240:intron 55.0%
ATATCCACTCCTGGACGGTG+GGG - chr1_1:35181628-35181647 None:intergenic 55.0%
GATATCCACTCCTGGACGGT+GGG - chr1_1:35181629-35181648 None:intergenic 55.0%
AGATATCCACTCCTGGACGG+TGG - chr1_1:35181630-35181649 None:intergenic 55.0%
TGATCCGAGTGACCCGATAG+TGG + chr1_1:35181656-35181675 Msa0020240:intron 55.0%
CAGTTGTGCCACGTGCTATC+AGG - chr1_1:35181685-35181704 None:intergenic 55.0%
GCACGCACAGACGCAATCAA+AGG - chr1_1:35181977-35181996 None:intergenic 55.0%
GACACATGTTCCTCGGTACC+AGG - chr1_1:35182527-35182546 None:intergenic 55.0%
TGACCTTGAGGAGGAGGATC+TGG + chr1_1:35182595-35182614 Msa0020240:CDS 55.0%
GAACTGTACTTCGTGCGGAC+TGG + chr1_1:35182798-35182817 Msa0020240:CDS 55.0%
CTGGTCTAGGAGCTTAGCTC+TGG + chr1_1:35186089-35186108 Msa0020240:intron 55.0%
!! TCTAGGAGCTTAGCTCTGGC+AGG + chr1_1:35186093-35186112 Msa0020240:intron 55.0%
GGCAGGAGTTCTCTGAACTC+TGG + chr1_1:35186110-35186129 Msa0020240:intron 55.0%
CGACCTACCGGATTATCGAG+AGG + chr1_1:35186243-35186262 Msa0020240:intron 55.0%
GCTCCTCTCGATAATCCGGT+AGG - chr1_1:35186249-35186268 None:intergenic 55.0%
!! GTACATCGCAGCATCGATGC+CGG + chr1_1:35186548-35186567 Msa0020240:intron 55.0%
!! GTTGGTGGCGGTTCAACATC+TGG - chr1_1:35186780-35186799 None:intergenic 55.0%
TGTTGAACCGCCACCAACAG+TGG + chr1_1:35186782-35186801 Msa0020240:intron 55.0%
! ATTCCGACCACTGTTGGTGG+CGG - chr1_1:35186792-35186811 None:intergenic 55.0%
ACCATCGTAGTGACCAGTGG+TGG + chr1_1:35187212-35187231 Msa0020240:intron 55.0%
ACCACCACTGGTCACTACGA+TGG - chr1_1:35187216-35187235 None:intergenic 55.0%
ATCCCTTGGCGTGTACCTAG+TGG + chr1_1:35187242-35187261 Msa0020240:intron 55.0%
CACCACTAGGTACACGCCAA+GGG - chr1_1:35187247-35187266 None:intergenic 55.0%
! CGTGTACCTAGTGGTGGTGT+CGG + chr1_1:35187251-35187270 Msa0020240:intron 55.0%
CTATTGCCGACACCACCACT+AGG - chr1_1:35187260-35187279 None:intergenic 55.0%
CTGGTCTAGGAGCTTAGCTC+TGG + chr1_1:35186089-35186108 Msa0020240:intron 55.0%
!! TCTAGGAGCTTAGCTCTGGC+AGG + chr1_1:35186093-35186112 Msa0020240:intron 55.0%
GGCAGGAGTTCTCTGAACTC+TGG + chr1_1:35186110-35186129 Msa0020240:intron 55.0%
AAGCTTGGGTGTAAGGCTGC+TGG - chr1_1:35188788-35188807 None:intergenic 55.0%
!! ACTTCTGGGGCCATCCATTC+AGG - chr1_1:35189184-35189203 None:intergenic 55.0%
AGCGGAAACCTGATAGCAGG+TGG - chr1_1:35189828-35189847 None:intergenic 55.0%
CTTGGGACCTCTCTCCTACT+AGG - chr1_1:35190042-35190061 None:intergenic 55.0%
CAGGGCCAATGTGTCTCACT+TGG - chr1_1:35190060-35190079 None:intergenic 55.0%
!! TCTGGTTCTGCATGGAGCAC+AGG + chr1_1:35190154-35190173 Msa0020240:intron 55.0%
!! CTGGTTCTGCATGGAGCACA+GGG + chr1_1:35190155-35190174 Msa0020240:intron 55.0%
! CCTTTTGTCCTCGGTAGTCC+AGG - chr1_1:35190294-35190313 None:intergenic 55.0%
CCTGGACTACCGAGGACAAA+AGG + chr1_1:35190291-35190310 Msa0020240:intron 55.0%
TGAGGAAGGAGCTCAACCAG+AGG - chr1_1:35190854-35190873 None:intergenic 55.0%
CACAGACGGGATAGTGAGGA+AGG - chr1_1:35190868-35190887 None:intergenic 55.0%
ACTGTAGGGAACCAAGGAGG+CGG + chr1_1:35191343-35191362 Msa0020240:intron 55.0%
AATGGGCAGCCATGGCAGAA+TGG + chr1_1:35191884-35191903 Msa0020240:intron 55.0%
! CACTGCCCTAGGCTTTGGTT+GGG - chr1_1:35192167-35192186 None:intergenic 55.0%
! TCACTGCCCTAGGCTTTGGT+TGG - chr1_1:35192168-35192187 None:intergenic 55.0%
ACCAAAGCCTAGGGCAGTGA+TGG + chr1_1:35192168-35192187 Msa0020240:intron 55.0%
ACCATCACTGCCCTAGGCTT+TGG - chr1_1:35192172-35192191 None:intergenic 55.0%
GTTAGGACCATCACTGCCCT+AGG - chr1_1:35192178-35192197 None:intergenic 55.0%
TAGGGGAGGATCTTCCGACG+AGG + chr1_1:35177810-35177829 Msa0020240:intron 60.0%
CGCCGCCTTCCGTCTTTGTT+AGG - chr1_1:35179291-35179310 None:intergenic 60.0%
AACAAAGACGGAAGGCGGCG+GGG + chr1_1:35179291-35179310 Msa0020240:intron 60.0%
TATCCACTCCTGGACGGTGG+GGG - chr1_1:35181627-35181646 None:intergenic 60.0%
GTCTGTGCGTGCACGCTCTT+TGG + chr1_1:35181985-35182004 Msa0020240:intron 60.0%
! GGTGGCGGTTCAACATCTGG+TGG - chr1_1:35186777-35186796 None:intergenic 60.0%
GAACCGCCACCAACAGTGGT+CGG + chr1_1:35186786-35186805 Msa0020240:intron 60.0%
GGCATTCCGACCACTGTTGG+TGG - chr1_1:35186795-35186814 None:intergenic 60.0%
GACGGCATTCCGACCACTGT+TGG - chr1_1:35186798-35186817 None:intergenic 60.0%
TAGTTTGGCCCTGGCCCATC+AGG - chr1_1:35186935-35186954 None:intergenic 60.0%
CCACCACTAGGTACACGCCA+AGG - chr1_1:35187248-35187267 None:intergenic 60.0%
CCTTGGCGTGTACCTAGTGG+TGG + chr1_1:35187245-35187264 Msa0020240:intron 60.0%
GAGAGGTAAATGGGCGTGGG+TGG + chr1_1:35188101-35188120 Msa0020240:intron 60.0%
GGGCGTGGGTGGAAGAAGAT+CGG + chr1_1:35188112-35188131 Msa0020240:intron 60.0%
TCGTTGGGCCACCTGCTATC+AGG + chr1_1:35189817-35189836 Msa0020240:intron 60.0%
!! AATGGTGGGTGGCCCGATAG+CGG - chr1_1:35189846-35189865 None:intergenic 60.0%
GAGACACATTGGCCCTGAGC+TGG + chr1_1:35190063-35190082 Msa0020240:intron 60.0%
GAGAAAGAAGGCCGCCTCCT+TGG - chr1_1:35191357-35191376 None:intergenic 60.0%
TTGTGTGTGGGTGGGTCGGG+TGG + chr1_1:35178391-35178410 Msa0020240:intron 65.0%
TGTGTGTGGGTGGGTCGGGT+GGG + chr1_1:35178392-35178411 Msa0020240:intron 65.0%
ACAAAGACGGAAGGCGGCGG+GGG + chr1_1:35179292-35179311 Msa0020240:intron 65.0%
GGGGGAAGGAGGAGGACACA+GGG + chr1_1:35179310-35179329 Msa0020240:intron 65.0%
GGAAGGAGGAGGACACAGGG+CGG + chr1_1:35179313-35179332 Msa0020240:intron 65.0%
GAAGGAGGAGGACACAGGGC+GGG + chr1_1:35179314-35179333 Msa0020240:intron 65.0%
GGAGCCCTCGCCTTACAAGC+CGG - chr1_1:35181548-35181567 None:intergenic 65.0%
!! GTACTTCGTGCGGACTGGCG+TGG + chr1_1:35182803-35182822 Msa0020240:CDS 65.0%
GTGTGTGGGTGGGTCGGGTG+GGG + chr1_1:35178393-35178412 Msa0020240:intron 70.0%
TGTGTGGGTGGGTCGGGTGG+GGG + chr1_1:35178394-35178413 Msa0020240:intron 70.0%
CGGGGGAAGGAGGAGGACAC+AGG + chr1_1:35179309-35179328 Msa0020240:intron 70.0%
ACACCCCCACCGTCCAGGAG+TGG + chr1_1:35181621-35181640 Msa0020240:intron 70.0%
GTGTGGGTGGGTCGGGTGGG+GGG + chr1_1:35178395-35178414 Msa0020240:intron 75.0%
TGTGGGTGGGTCGGGTGGGG+GGG + chr1_1:35178396-35178415 Msa0020240:intron 75.0%
AGACGGAAGGCGGCGGGGGA+AGG + chr1_1:35179296-35179315 Msa0020240:intron 75.0%
AAGGCGGCGGGGGAAGGAGG+AGG + chr1_1:35179302-35179321 Msa0020240:intron 75.0%
! GTGGGTGGGTCGGGTGGGGG+GGG + chr1_1:35178397-35178416 Msa0020240:intron 80.0%
! CGGAAGGCGGCGGGGGAAGG+AGG + chr1_1:35179299-35179318 Msa0020240:intron 80.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 35176383 35192695 35176383 ID=Msa0020240;Name=Msa0020240
chr1_1 mRNA 35176383 35192695 35176383 ID=Msa0020240-mRNA-1;Parent=Msa0020240;Name=Msa0020240-mRNA-1;_AED=0.22;_eAED=0.22;_QI=122|0.93|1|1|0.8|0.87|16|345|645
chr1_1 exon 35176383 35176792 35176383 ID=Msa0020240-mRNA-1:exon:11209;Parent=Msa0020240-mRNA-1
chr1_1 exon 35177423 35177724 35177423 ID=Msa0020240-mRNA-1:exon:11210;Parent=Msa0020240-mRNA-1
chr1_1 exon 35177813 35177954 35177813 ID=Msa0020240-mRNA-1:exon:11211;Parent=Msa0020240-mRNA-1
chr1_1 exon 35178226 35178329 35178226 ID=Msa0020240-mRNA-1:exon:11212;Parent=Msa0020240-mRNA-1
chr1_1 exon 35180444 35180649 35180444 ID=Msa0020240-mRNA-1:exon:11213;Parent=Msa0020240-mRNA-1
chr1_1 exon 35182251 35182337 35182251 ID=Msa0020240-mRNA-1:exon:11214;Parent=Msa0020240-mRNA-1
chr1_1 exon 35182522 35182662 35182522 ID=Msa0020240-mRNA-1:exon:11215;Parent=Msa0020240-mRNA-1
chr1_1 exon 35182789 35182829 35182789 ID=Msa0020240-mRNA-1:exon:11216;Parent=Msa0020240-mRNA-1
chr1_1 exon 35184909 35184977 35184909 ID=Msa0020240-mRNA-1:exon:11217;Parent=Msa0020240-mRNA-1
chr1_1 exon 35185129 35185229 35185129 ID=Msa0020240-mRNA-1:exon:11218;Parent=Msa0020240-mRNA-1
chr1_1 exon 35185328 35185412 35185328 ID=Msa0020240-mRNA-1:exon:11219;Parent=Msa0020240-mRNA-1
chr1_1 exon 35189008 35189076 35189008 ID=Msa0020240-mRNA-1:exon:11220;Parent=Msa0020240-mRNA-1
chr1_1 exon 35189181 35189312 35189181 ID=Msa0020240-mRNA-1:exon:11221;Parent=Msa0020240-mRNA-1
chr1_1 exon 35190955 35191049 35190955 ID=Msa0020240-mRNA-1:exon:11222;Parent=Msa0020240-mRNA-1
chr1_1 exon 35191350 35191491 35191350 ID=Msa0020240-mRNA-1:exon:11223;Parent=Msa0020240-mRNA-1
chr1_1 exon 35192417 35192695 35192417 ID=Msa0020240-mRNA-1:exon:11224;Parent=Msa0020240-mRNA-1
chr1_1 five_prime_UTR 35176383 35176504 35176383 ID=Msa0020240-mRNA-1:five_prime_utr;Parent=Msa0020240-mRNA-1
chr1_1 CDS 35176505 35176792 35176505 ID=Msa0020240-mRNA-1:cds;Parent=Msa0020240-mRNA-1
chr1_1 CDS 35177423 35177724 35177423 ID=Msa0020240-mRNA-1:cds;Parent=Msa0020240-mRNA-1
chr1_1 CDS 35177813 35177954 35177813 ID=Msa0020240-mRNA-1:cds;Parent=Msa0020240-mRNA-1
chr1_1 CDS 35178226 35178329 35178226 ID=Msa0020240-mRNA-1:cds;Parent=Msa0020240-mRNA-1
chr1_1 CDS 35180444 35180649 35180444 ID=Msa0020240-mRNA-1:cds;Parent=Msa0020240-mRNA-1
chr1_1 CDS 35182251 35182337 35182251 ID=Msa0020240-mRNA-1:cds;Parent=Msa0020240-mRNA-1
chr1_1 CDS 35182522 35182662 35182522 ID=Msa0020240-mRNA-1:cds;Parent=Msa0020240-mRNA-1
chr1_1 CDS 35182789 35182829 35182789 ID=Msa0020240-mRNA-1:cds;Parent=Msa0020240-mRNA-1
chr1_1 CDS 35184909 35184977 35184909 ID=Msa0020240-mRNA-1:cds;Parent=Msa0020240-mRNA-1
chr1_1 CDS 35185129 35185229 35185129 ID=Msa0020240-mRNA-1:cds;Parent=Msa0020240-mRNA-1
chr1_1 CDS 35185328 35185412 35185328 ID=Msa0020240-mRNA-1:cds;Parent=Msa0020240-mRNA-1
chr1_1 CDS 35189008 35189076 35189008 ID=Msa0020240-mRNA-1:cds;Parent=Msa0020240-mRNA-1
chr1_1 CDS 35189181 35189312 35189181 ID=Msa0020240-mRNA-1:cds;Parent=Msa0020240-mRNA-1
chr1_1 CDS 35190955 35191049 35190955 ID=Msa0020240-mRNA-1:cds;Parent=Msa0020240-mRNA-1
chr1_1 CDS 35191350 35191425 35191350 ID=Msa0020240-mRNA-1:cds;Parent=Msa0020240-mRNA-1
chr1_1 three_prime_UTR 35191426 35191491 35191426 ID=Msa0020240-mRNA-1:three_prime_utr;Parent=Msa0020240-mRNA-1
chr1_1 three_prime_UTR 35192417 35192695 35192417 ID=Msa0020240-mRNA-1:three_prime_utr;Parent=Msa0020240-mRNA-1
Gene Sequence

>Msa0020240

ATGTACGGCGGTGGTGAGCGTGAGTGCGAATCTGAGAGCATGATGATGATTACGCAGAACGACGAAGATGAAGAAGACGAAGAAGGTTCTTCTTCTTCTTTCAAGAGCTGGGCAAAGCAAACAGAAGAGAGCTATCAATTGCAGCTCGCACTTGCTCTTCGCATTTCATCTCACTCTGCTTCTTCTGCTCAATCCAATCGCTTCTTGGATTTGGAACCTACCTCCTCTCCTTCTCCTTCTTCTTCTTCTTCTTCCGATTCCCCTCAATCACTTTCACACCGGTTTTGGGTAAATGGTTGTTTGCAATACTCTGACAAAGTTCTAGATGGATTTTACCTAATTCATGGGATGGATGCATATACATGGACTATAAGTACCGATATGCAGAATGTTGGTATGATTCCATCATTTGAATCACTAATGTCGGTGAAACCGTGTGATAACTCGTCAGTTGTAGTGGTTGCTATTGACAAATCTAGAGACCCTGCCTTGAGAGAACTGCTAACTGGGGTATTAAGTCTTTCAAGTAACTGGATTACCATCAAAGCTGCAACTGATCAGCTTGCAAATCTTGTTTGTAGTAGGATGGGGGGAGGATCTTCCGACGAGGAAAATTTAGGTGCGCGCTGGAAGGAATGCTCTGATATTCTTAAAAGCTGTCTACAGTGTATCATTCTTCCAATTGGAAGCTTACCCATTGGCCTTTGTGTCCATCGAGCATTGCTCTTTAAAGTGTTAGCGGATTTAATCAACCTACCGTGTCGAATCGCTAAGGGATGCAAGTATTGTAGAAAGGACATGGGTGCTTCTTGTATAGTGCAATTTGGTTCTGACAGGGAGTATATGATTGATTTAGTAGGAAGGCCCGGGGATACATGCCAACCTGATTCTTCAGTGAATTCTGCATCTTCGATGTTGATCCCTTCACCATTATGTCATCCAAGGTTCAAGCCAGTTGAAACAGCTGAATATACAAAGACAATGGCCCAATTGTATTTCTTGGACAATCAAGCACTGCATCTTGTGTTTGATACCACGTCAGGAGGTACTGTTGATTGTAGGGACAAAGTGGATCTTCAGCAAACTGAAATGTTTGGTGCAAACTATGCTGGTGGGAACAACCATATAGGTCCTGGTACCGAGGAACATGTGTCTTTCAATGAAGCAAACCAATCAGTAGTGAATTATTTGAGTCATGAAGTTGACCTTGAGGAGGAGGATCTGGATATTCCGTGGAGTGAACTTATTTTGAAGGAGAACATTGGGACAGGGTCATTTGGAACTGTACTTCGTGCGGACTGGCGTGGCTCTGATGTTGCTGTGAAGATACTTAAGGTGCAAGGTTTTGATTCTGAACGATTTGAAGAGTTTCTAAAGGAGGTCACACTCATGAAGCGTCTACGTCATCCAAACATTGTACTTCTAATGGGCGCTGTTATCCAACCACCAAAATTATCAATAGTAACAGAATATTTATCAAGAGGAAGCTTGTATGAACTTCTGCAAATGCCAGGTGTTGGTTCCTCAATCAATGAGAAGCGTCGTTTAAGTATGGCATATGACGTGGTATGTGACTTTGGCCTTTCACGTACAAAGGCAAATACATATCTTTCATCTAAAACAGCTGCTGGAACTCCTGAATGGATGGCCCCAGAAGTCATCAAAGGTGAACTATCAAATGAAAAATGCGATGTATTCAGCTTTGGTGTAATCTTGTGGGAACTGGTGACCCTTCAACAACCATGGAGGCAGTTAAATCCTTCACAGGTTGTTGCAGCTGTTGGTTTTATGGGCAAAAGGCTAGAAATTCCGAGGCATGTGAATCCTCAAGTGGCTGCCTTAATTGAGCTCTGCTGGTCTACGGAACCAAGGAGGCGGCCTTCTTTCTCCTATATTATGAAATGTTTGCAGCAAATAATTGCCAATGCTAAAGTGTGA
Protein sequence

>Msa0020240

MYGGGERECESESMMMITQNDEDEEDEEGSSSSFKSWAKQTEESYQLQLALALRISSHSASSAQSNRFLDLEPTSSPSPSSSSSSDSPQSLSHRFWVNGCLQYSDKVLDGFYLIHGMDAYTWTISTDMQNVGMIPSFESLMSVKPCDNSSVVVVAIDKSRDPALRELLTGVLSLSSNWITIKAATDQLANLVCSRMGGGSSDEENLGARWKECSDILKSCLQCIILPIGSLPIGLCVHRALLFKVLADLINLPCRIAKGCKYCRKDMGASCIVQFGSDREYMIDLVGRPGDTCQPDSSVNSASSMLIPSPLCHPRFKPVETAEYTKTMAQLYFLDNQALHLVFDTTSGGTVDCRDKVDLQQTEMFGANYAGGNNHIGPGTEEHVSFNEANQSVVNYLSHEVDLEEEDLDIPWSELILKENIGTGSFGTVLRADWRGSDVAVKILKVQGFDSERFEEFLKEVTLMKRLRHPNIVLLMGAVIQPPKLSIVTEYLSRGSLYELLQMPGVGSSINEKRRLSMAYDVVCDFGLSRTKANTYLSSKTAAGTPEWMAPEVIKGELSNEKCDVFSFGVILWELVTLQQPWRQLNPSQVVAAVGFMGKRLEIPRHVNPQVAALIELCWSTEPRRRPSFSYIMKCLQQIIANAKV*