Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0022160 | XP_013467656.1 | 69.231 | 130 | 17 | 2 | 413 | 537 | 228 | 339 | 2.36e-44 | 173 |
Msa0022160 | XP_013467656.1 | 94.245 | 417 | 18 | 3 | 1 | 413 | 1 | 415 | 0.0 | 766 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0022160 | sp|Q0WVU3|PHL5_ARATH | 80.000 | 135 | 26 | 1 | 256 | 389 | 192 | 326 | 1.35e-67 | 226 |
Msa0022160 | sp|Q0WVU3|PHL5_ARATH | 64.516 | 93 | 29 | 1 | 414 | 502 | 164 | 256 | 1.46e-28 | 120 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0022160 | A0A072VJR9 | 69.231 | 130 | 17 | 2 | 413 | 537 | 228 | 339 | 1.13e-44 | 173 |
Msa0022160 | A0A072VJR9 | 94.245 | 417 | 18 | 3 | 1 | 413 | 1 | 415 | 0.0 | 766 |
Gene ID | Type | Classification |
---|---|---|
Msa0022160 | TF | MYB |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0022160 | MtrunA17_Chr1g0175091 | 94.245 | 417 | 18 | 3 | 1 | 413 | 1 | 415 | 0.0 | 766 |
Msa0022160 | MtrunA17_Chr1g0175091 | 69.231 | 130 | 17 | 2 | 413 | 537 | 228 | 339 | 2.17e-48 | 173 |
Msa0022160 | MtrunA17_Chr7g0258551 | 60.714 | 364 | 109 | 9 | 67 | 413 | 20 | 366 | 5.29e-128 | 379 |
Msa0022160 | MtrunA17_Chr7g0258551 | 53.435 | 131 | 37 | 3 | 413 | 537 | 182 | 294 | 4.55e-33 | 130 |
Msa0022160 | MtrunA17_Chr7g0261911 | 52.486 | 181 | 76 | 4 | 246 | 417 | 252 | 431 | 1.46e-54 | 191 |
Msa0022160 | MtrunA17_Chr7g0261911 | 54.667 | 75 | 34 | 0 | 428 | 502 | 252 | 326 | 4.83e-23 | 102 |
Msa0022160 | MtrunA17_Chr1g0190301 | 55.488 | 164 | 59 | 4 | 251 | 400 | 166 | 329 | 1.17e-49 | 176 |
Msa0022160 | MtrunA17_Chr1g0190301 | 45.833 | 120 | 56 | 2 | 392 | 502 | 120 | 239 | 6.03e-23 | 100 |
Msa0022160 | MtrunA17_Chr2g0291021 | 42.601 | 223 | 92 | 5 | 256 | 442 | 49 | 271 | 1.67e-48 | 171 |
Msa0022160 | MtrunA17_Chr2g0291021 | 55.932 | 59 | 26 | 0 | 440 | 498 | 51 | 109 | 1.10e-17 | 84.3 |
Msa0022160 | MtrunA17_Chr1g0175081 | 87.356 | 87 | 11 | 0 | 417 | 503 | 1 | 87 | 1.66e-47 | 160 |
Msa0022160 | MtrunA17_Chr1g0175081 | 75.904 | 83 | 20 | 0 | 238 | 320 | 4 | 86 | 4.20e-37 | 132 |
Msa0022160 | MtrunA17_Chr7g0254981 | 50.000 | 156 | 65 | 3 | 247 | 389 | 33 | 188 | 4.84e-46 | 162 |
Msa0022160 | MtrunA17_Chr7g0254981 | 48.148 | 81 | 33 | 2 | 431 | 502 | 35 | 115 | 4.39e-19 | 87.8 |
Msa0022160 | MtrunA17_Chr7g0274471 | 52.727 | 165 | 66 | 4 | 255 | 411 | 217 | 377 | 5.53e-46 | 167 |
Msa0022160 | MtrunA17_Chr7g0274471 | 64.407 | 59 | 21 | 0 | 440 | 498 | 220 | 278 | 5.17e-20 | 92.8 |
Msa0022160 | MtrunA17_Chr6g0461641 | 45.562 | 169 | 66 | 3 | 252 | 398 | 38 | 202 | 8.37e-38 | 143 |
Msa0022160 | MtrunA17_Chr6g0461641 | 58.730 | 63 | 26 | 0 | 434 | 496 | 38 | 100 | 9.59e-20 | 91.7 |
Msa0022160 | MtrunA17_Chr2g0321461 | 44.086 | 186 | 73 | 5 | 234 | 397 | 27 | 203 | 5.44e-37 | 141 |
Msa0022160 | MtrunA17_Chr2g0321461 | 53.968 | 63 | 29 | 0 | 434 | 496 | 41 | 103 | 3.15e-18 | 86.7 |
Msa0022160 | MtrunA17_Chr1g0175071 | 42.857 | 203 | 108 | 4 | 192 | 392 | 118 | 314 | 1.05e-35 | 135 |
Msa0022160 | MtrunA17_Chr1g0175071 | 63.462 | 52 | 19 | 0 | 440 | 491 | 179 | 230 | 9.96e-14 | 72.4 |
Msa0022160 | MtrunA17_Chr7g0242521 | 50.365 | 137 | 63 | 3 | 244 | 376 | 2 | 137 | 6.12e-35 | 131 |
Msa0022160 | MtrunA17_Chr7g0242521 | 51.316 | 76 | 33 | 2 | 426 | 498 | 2 | 76 | 7.54e-16 | 77.4 |
Msa0022160 | MtrunA17_Chr5g0409731 | 46.154 | 143 | 63 | 2 | 256 | 384 | 25 | 167 | 2.83e-34 | 131 |
Msa0022160 | MtrunA17_Chr5g0409731 | 53.571 | 56 | 26 | 0 | 440 | 495 | 27 | 82 | 2.57e-16 | 79.7 |
Msa0022160 | MtrunA17_Chr4g0042451 | 42.953 | 149 | 70 | 3 | 252 | 386 | 13 | 160 | 2.81e-32 | 127 |
Msa0022160 | MtrunA17_Chr4g0042451 | 49.180 | 61 | 31 | 0 | 434 | 494 | 13 | 73 | 9.03e-16 | 79.0 |
Msa0022160 | MtrunA17_Chr5g0417521 | 39.073 | 151 | 78 | 1 | 252 | 388 | 11 | 161 | 2.88e-32 | 127 |
Msa0022160 | MtrunA17_Chr5g0417521 | 50.820 | 61 | 30 | 0 | 434 | 494 | 11 | 71 | 1.38e-17 | 84.3 |
Msa0022160 | MtrunA17_Chr2g0290991 | 40.373 | 161 | 73 | 4 | 237 | 379 | 21 | 176 | 3.62e-30 | 120 |
Msa0022160 | MtrunA17_Chr2g0290991 | 43.956 | 91 | 47 | 2 | 407 | 494 | 6 | 95 | 3.50e-16 | 79.7 |
Msa0022160 | MtrunA17_Chr7g0258531 | 36.957 | 230 | 118 | 6 | 160 | 386 | 139 | 344 | 8.38e-30 | 120 |
Msa0022160 | MtrunA17_Chr7g0258531 | 39.130 | 115 | 57 | 3 | 429 | 536 | 204 | 312 | 4.48e-14 | 73.9 |
Msa0022160 | MtrunA17_Chr8g0356501 | 40.541 | 148 | 67 | 2 | 252 | 386 | 33 | 172 | 1.04e-29 | 119 |
Msa0022160 | MtrunA17_Chr8g0356501 | 52.727 | 55 | 26 | 0 | 440 | 494 | 39 | 93 | 4.16e-14 | 73.9 |
Msa0022160 | MtrunA17_Chr2g0310011 | 43.165 | 139 | 58 | 2 | 252 | 377 | 31 | 161 | 2.22e-29 | 119 |
Msa0022160 | MtrunA17_Chr2g0310011 | 47.541 | 61 | 32 | 0 | 434 | 494 | 31 | 91 | 2.43e-14 | 74.7 |
Msa0022160 | MtrunA17_Chr1g0197171 | 40.000 | 135 | 70 | 2 | 256 | 379 | 44 | 178 | 2.60e-25 | 105 |
Msa0022160 | MtrunA17_Chr1g0197171 | 56.364 | 55 | 24 | 0 | 440 | 494 | 46 | 100 | 2.51e-15 | 76.6 |
Msa0022160 | MtrunA17_Chr7g0243081 | 52.055 | 73 | 34 | 1 | 258 | 330 | 73 | 144 | 1.15e-15 | 78.6 |
Msa0022160 | MtrunA17_Chr7g0243081 | 56.140 | 57 | 25 | 0 | 440 | 496 | 73 | 129 | 1.27e-14 | 75.5 |
Msa0022160 | MtrunA17_Chr8g0379121 | 58.065 | 62 | 25 | 1 | 258 | 319 | 113 | 173 | 1.64e-15 | 79.0 |
Msa0022160 | MtrunA17_Chr8g0379121 | 54.839 | 62 | 27 | 1 | 440 | 501 | 113 | 173 | 1.37e-14 | 75.9 |
Msa0022160 | MtrunA17_Chr2g0320231 | 59.677 | 62 | 24 | 1 | 258 | 319 | 99 | 159 | 1.66e-15 | 78.6 |
Msa0022160 | MtrunA17_Chr2g0320231 | 56.452 | 62 | 26 | 1 | 440 | 501 | 99 | 159 | 1.60e-14 | 75.5 |
Msa0022160 | MtrunA17_Chr6g0479431 | 60.000 | 55 | 22 | 0 | 258 | 312 | 204 | 258 | 3.78e-15 | 77.4 |
Msa0022160 | MtrunA17_Chr6g0479431 | 52.459 | 61 | 29 | 0 | 440 | 500 | 204 | 264 | 8.76e-14 | 73.2 |
Msa0022160 | MtrunA17_Chr8g0366281 | 60.000 | 55 | 22 | 0 | 258 | 312 | 175 | 229 | 6.38e-15 | 76.3 |
Msa0022160 | MtrunA17_Chr8g0366281 | 50.820 | 61 | 30 | 0 | 440 | 500 | 175 | 235 | 1.23e-12 | 69.3 |
Msa0022160 | MtrunA17_Chr5g0410741 | 60.000 | 55 | 22 | 0 | 258 | 312 | 221 | 275 | 7.02e-15 | 76.6 |
Msa0022160 | MtrunA17_Chr5g0410741 | 54.545 | 55 | 25 | 0 | 440 | 494 | 221 | 275 | 2.43e-12 | 68.9 |
Msa0022160 | MtrunA17_Chr3g0109981 | 60.000 | 55 | 22 | 0 | 258 | 312 | 276 | 330 | 7.40e-15 | 77.0 |
Msa0022160 | MtrunA17_Chr3g0109981 | 50.000 | 66 | 33 | 0 | 440 | 505 | 276 | 341 | 1.42e-13 | 73.2 |
Msa0022160 | MtrunA17_Chr2g0288601 | 44.186 | 86 | 45 | 2 | 403 | 488 | 39 | 121 | 8.02e-15 | 71.2 |
Msa0022160 | MtrunA17_Chr2g0288601 | 62.264 | 53 | 20 | 0 | 254 | 306 | 69 | 121 | 1.49e-14 | 70.5 |
Msa0022160 | MtrunA17_Chr1g0162931 | 62.069 | 58 | 21 | 1 | 253 | 309 | 14 | 71 | 9.59e-15 | 74.7 |
Msa0022160 | MtrunA17_Chr1g0162931 | 59.615 | 52 | 21 | 0 | 440 | 491 | 20 | 71 | 1.32e-13 | 71.6 |
Msa0022160 | MtrunA17_Chr1g0210911 | 63.462 | 52 | 19 | 0 | 258 | 309 | 24 | 75 | 1.96e-14 | 74.7 |
Msa0022160 | MtrunA17_Chr1g0210911 | 59.615 | 52 | 21 | 0 | 440 | 491 | 24 | 75 | 1.68e-13 | 72.0 |
Msa0022160 | MtrunA17_Chr3g0095611 | 54.237 | 59 | 27 | 0 | 254 | 312 | 17 | 75 | 2.66e-14 | 72.0 |
Msa0022160 | MtrunA17_Chr3g0095611 | 43.210 | 81 | 39 | 1 | 436 | 509 | 17 | 97 | 2.83e-13 | 68.9 |
Msa0022160 | MtrunA17_Chr1g0154261 | 52.381 | 63 | 30 | 0 | 258 | 320 | 128 | 190 | 2.78e-14 | 73.6 |
Msa0022160 | MtrunA17_Chr1g0154261 | 45.455 | 66 | 36 | 0 | 440 | 505 | 128 | 193 | 8.34e-12 | 66.2 |
Msa0022160 | MtrunA17_Chr4g0062921 | 35.922 | 103 | 66 | 0 | 414 | 516 | 211 | 313 | 6.07e-13 | 70.9 |
Msa0022160 | MtrunA17_Chr4g0062921 | 43.820 | 89 | 45 | 1 | 227 | 315 | 211 | 294 | 1.70e-12 | 69.3 |
Msa0022160 | MtrunA17_Chr2g0283951 | 61.224 | 49 | 19 | 0 | 258 | 306 | 91 | 139 | 1.09e-12 | 69.7 |
Msa0022160 | MtrunA17_Chr2g0283951 | 57.143 | 49 | 21 | 0 | 440 | 488 | 91 | 139 | 1.25e-11 | 66.6 |
Msa0022160 | MtrunA17_Chr7g0275401 | 54.098 | 61 | 27 | 1 | 249 | 309 | 185 | 244 | 1.31e-12 | 68.6 |
Msa0022160 | MtrunA17_Chr1g0198601 | 51.667 | 60 | 29 | 0 | 256 | 315 | 211 | 270 | 2.28e-12 | 68.9 |
Msa0022160 | MtrunA17_Chr4g0045361 | 37.234 | 94 | 55 | 1 | 417 | 510 | 257 | 346 | 2.81e-12 | 68.6 |
Msa0022160 | MtrunA17_Chr4g0045361 | 53.448 | 58 | 27 | 0 | 253 | 310 | 271 | 328 | 1.49e-11 | 66.6 |
Msa0022160 | MtrunA17_Chr4g0009901 | 50.877 | 57 | 27 | 1 | 254 | 310 | 166 | 221 | 7.00e-12 | 66.2 |
Msa0022160 | MtrunA17_Chr4g0009901 | 49.123 | 57 | 28 | 1 | 436 | 492 | 166 | 221 | 1.67e-11 | 65.1 |
Msa0022160 | MtrunA17_Chr2g0304841 | 50.000 | 64 | 31 | 1 | 440 | 503 | 215 | 277 | 1.04e-11 | 67.8 |
Msa0022160 | MtrunA17_Chr5g0422621 | 41.304 | 92 | 48 | 2 | 224 | 310 | 162 | 252 | 2.58e-11 | 65.5 |
Msa0022160 | MtrunA17_Chr5g0402631 | 54.386 | 57 | 26 | 0 | 254 | 310 | 212 | 268 | 3.03e-11 | 65.1 |
Msa0022160 | MtrunA17_Chr5g0400241 | 45.570 | 79 | 39 | 2 | 237 | 312 | 289 | 366 | 3.47e-11 | 65.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0022160 | AT5G06800.1 | 80.000 | 135 | 26 | 1 | 256 | 389 | 192 | 326 | 1.37e-68 | 226 |
Msa0022160 | AT5G06800.1 | 64.516 | 93 | 29 | 1 | 414 | 502 | 164 | 256 | 1.48e-29 | 120 |
Msa0022160 | AT5G06800.2 | 77.143 | 140 | 26 | 2 | 256 | 389 | 192 | 331 | 3.38e-66 | 219 |
Msa0022160 | AT5G06800.2 | 66.292 | 89 | 26 | 1 | 414 | 498 | 164 | 252 | 6.28e-29 | 118 |
Msa0022160 | AT4G28610.1 | 56.522 | 161 | 63 | 5 | 239 | 396 | 212 | 368 | 3.71e-50 | 177 |
Msa0022160 | AT4G28610.1 | 54.321 | 81 | 33 | 1 | 428 | 504 | 211 | 291 | 1.24e-21 | 97.8 |
Msa0022160 | AT5G29000.1 | 59.286 | 140 | 52 | 3 | 251 | 385 | 183 | 322 | 1.04e-49 | 176 |
Msa0022160 | AT5G29000.1 | 57.971 | 69 | 29 | 0 | 430 | 498 | 180 | 248 | 2.45e-21 | 96.3 |
Msa0022160 | AT5G29000.3 | 59.286 | 140 | 52 | 3 | 251 | 385 | 183 | 322 | 1.04e-49 | 176 |
Msa0022160 | AT5G29000.3 | 57.971 | 69 | 29 | 0 | 430 | 498 | 180 | 248 | 2.45e-21 | 96.3 |
Msa0022160 | AT5G29000.2 | 59.286 | 140 | 52 | 3 | 251 | 385 | 226 | 365 | 1.53e-49 | 176 |
Msa0022160 | AT5G29000.2 | 55.556 | 72 | 32 | 0 | 430 | 501 | 223 | 294 | 4.44e-21 | 96.3 |
Msa0022160 | AT2G01060.1 | 53.086 | 162 | 70 | 4 | 251 | 409 | 10 | 168 | 6.55e-49 | 171 |
Msa0022160 | AT2G01060.1 | 53.425 | 73 | 31 | 1 | 429 | 498 | 3 | 75 | 6.98e-19 | 87.4 |
Msa0022160 | AT3G04450.4 | 45.588 | 204 | 93 | 6 | 208 | 406 | 157 | 347 | 1.86e-48 | 173 |
Msa0022160 | AT3G04450.4 | 59.701 | 67 | 27 | 0 | 432 | 498 | 192 | 258 | 3.96e-22 | 99.0 |
Msa0022160 | AT3G04450.2 | 45.588 | 204 | 93 | 6 | 208 | 406 | 157 | 347 | 1.86e-48 | 173 |
Msa0022160 | AT3G04450.2 | 59.701 | 67 | 27 | 0 | 432 | 498 | 192 | 258 | 3.96e-22 | 99.0 |
Msa0022160 | AT3G04450.1 | 45.588 | 204 | 93 | 6 | 208 | 406 | 197 | 387 | 3.67e-48 | 173 |
Msa0022160 | AT3G04450.1 | 59.701 | 67 | 27 | 0 | 432 | 498 | 232 | 298 | 6.57e-22 | 99.0 |
Msa0022160 | AT3G13040.3 | 43.304 | 224 | 111 | 7 | 229 | 441 | 211 | 429 | 2.57e-45 | 166 |
Msa0022160 | AT3G13040.3 | 49.451 | 91 | 38 | 1 | 416 | 498 | 211 | 301 | 3.36e-22 | 99.8 |
Msa0022160 | AT3G13040.1 | 43.304 | 224 | 111 | 7 | 229 | 441 | 211 | 429 | 2.57e-45 | 166 |
Msa0022160 | AT3G13040.1 | 49.451 | 91 | 38 | 1 | 416 | 498 | 211 | 301 | 3.36e-22 | 99.8 |
Msa0022160 | AT3G13040.2 | 43.304 | 224 | 111 | 7 | 229 | 441 | 211 | 429 | 2.57e-45 | 166 |
Msa0022160 | AT3G13040.2 | 49.451 | 91 | 38 | 1 | 416 | 498 | 211 | 301 | 3.36e-22 | 99.8 |
Msa0022160 | AT2G20400.1 | 56.923 | 130 | 54 | 2 | 256 | 383 | 231 | 360 | 8.13e-42 | 155 |
Msa0022160 | AT2G20400.1 | 55.556 | 72 | 32 | 0 | 440 | 511 | 233 | 304 | 5.28e-20 | 92.8 |
Msa0022160 | AT2G20400.2 | 56.489 | 131 | 54 | 3 | 256 | 383 | 231 | 361 | 3.53e-40 | 150 |
Msa0022160 | AT2G20400.2 | 58.462 | 65 | 27 | 0 | 440 | 504 | 233 | 297 | 3.66e-19 | 90.1 |
Msa0022160 | AT5G18240.1 | 47.239 | 163 | 64 | 4 | 252 | 397 | 41 | 198 | 7.56e-38 | 144 |
Msa0022160 | AT5G18240.1 | 57.377 | 61 | 26 | 0 | 434 | 494 | 41 | 101 | 2.11e-18 | 87.8 |
Msa0022160 | AT5G18240.4 | 47.239 | 163 | 64 | 4 | 252 | 397 | 41 | 198 | 7.56e-38 | 144 |
Msa0022160 | AT5G18240.4 | 57.377 | 61 | 26 | 0 | 434 | 494 | 41 | 101 | 2.11e-18 | 87.8 |
Msa0022160 | AT3G04030.3 | 49.080 | 163 | 61 | 4 | 252 | 397 | 41 | 198 | 1.15e-36 | 140 |
Msa0022160 | AT3G04030.3 | 50.000 | 80 | 38 | 1 | 434 | 511 | 41 | 120 | 5.32e-20 | 92.8 |
Msa0022160 | AT5G06800.3 | 90.769 | 65 | 6 | 0 | 256 | 320 | 192 | 256 | 1.30e-35 | 135 |
Msa0022160 | AT5G06800.3 | 56.881 | 109 | 43 | 1 | 413 | 517 | 163 | 271 | 8.72e-32 | 124 |
Msa0022160 | AT1G69580.1 | 45.806 | 155 | 63 | 3 | 252 | 386 | 30 | 183 | 1.37e-35 | 136 |
Msa0022160 | AT1G69580.1 | 52.381 | 63 | 30 | 0 | 434 | 496 | 30 | 92 | 3.49e-16 | 80.5 |
Msa0022160 | AT1G69580.2 | 44.516 | 155 | 66 | 2 | 252 | 386 | 30 | 184 | 4.38e-35 | 135 |
Msa0022160 | AT1G69580.2 | 52.381 | 63 | 30 | 0 | 434 | 496 | 30 | 92 | 3.47e-16 | 80.5 |
Msa0022160 | AT5G18240.5 | 46.626 | 163 | 63 | 5 | 252 | 397 | 41 | 196 | 5.36e-35 | 136 |
Msa0022160 | AT5G18240.5 | 57.377 | 61 | 26 | 0 | 434 | 494 | 41 | 101 | 2.02e-18 | 87.8 |
Msa0022160 | AT4G13640.1 | 41.916 | 167 | 81 | 3 | 235 | 385 | 14 | 180 | 1.57e-34 | 132 |
Msa0022160 | AT4G13640.1 | 43.662 | 71 | 40 | 0 | 440 | 510 | 39 | 109 | 2.85e-14 | 73.9 |
Msa0022160 | AT3G24120.1 | 42.515 | 167 | 75 | 3 | 241 | 386 | 26 | 192 | 2.08e-34 | 132 |
Msa0022160 | AT3G24120.1 | 46.154 | 65 | 35 | 0 | 440 | 504 | 43 | 107 | 1.46e-14 | 75.1 |
Msa0022160 | AT3G04030.2 | 47.853 | 163 | 62 | 5 | 252 | 397 | 41 | 197 | 8.77e-34 | 132 |
Msa0022160 | AT3G04030.2 | 47.500 | 80 | 39 | 2 | 434 | 511 | 41 | 119 | 2.41e-17 | 84.7 |
Msa0022160 | AT1G79430.2 | 41.111 | 180 | 85 | 5 | 216 | 386 | 2 | 169 | 1.40e-33 | 131 |
Msa0022160 | AT1G79430.2 | 52.727 | 55 | 26 | 0 | 440 | 494 | 36 | 90 | 2.71e-14 | 75.1 |
Msa0022160 | AT5G18240.2 | 44.785 | 163 | 62 | 5 | 252 | 397 | 41 | 192 | 1.16e-32 | 129 |
Msa0022160 | AT5G18240.2 | 57.377 | 61 | 26 | 0 | 434 | 494 | 41 | 101 | 1.88e-18 | 87.8 |
Msa0022160 | AT5G18240.3 | 44.785 | 163 | 62 | 5 | 252 | 397 | 41 | 192 | 1.16e-32 | 129 |
Msa0022160 | AT5G18240.3 | 57.377 | 61 | 26 | 0 | 434 | 494 | 41 | 101 | 1.88e-18 | 87.8 |
Msa0022160 | AT4G13640.2 | 41.176 | 170 | 81 | 4 | 235 | 385 | 14 | 183 | 1.43e-32 | 127 |
Msa0022160 | AT4G13640.2 | 43.662 | 71 | 40 | 0 | 440 | 510 | 39 | 109 | 2.98e-14 | 73.9 |
Msa0022160 | AT3G24120.2 | 41.765 | 170 | 75 | 4 | 241 | 386 | 26 | 195 | 1.92e-32 | 126 |
Msa0022160 | AT3G24120.2 | 46.154 | 65 | 35 | 0 | 440 | 504 | 43 | 107 | 1.46e-14 | 75.1 |
Msa0022160 | AT5G45580.1 | 43.125 | 160 | 61 | 4 | 256 | 390 | 7 | 161 | 2.11e-32 | 125 |
Msa0022160 | AT5G45580.1 | 56.364 | 55 | 24 | 0 | 440 | 494 | 9 | 63 | 1.63e-16 | 80.1 |
Msa0022160 | AT5G45580.2 | 43.125 | 160 | 61 | 4 | 256 | 390 | 23 | 177 | 2.59e-32 | 125 |
Msa0022160 | AT5G45580.2 | 56.364 | 55 | 24 | 0 | 440 | 494 | 25 | 79 | 1.95e-16 | 80.1 |
Msa0022160 | AT3G04030.1 | 46.626 | 163 | 59 | 5 | 252 | 397 | 41 | 192 | 1.51e-31 | 126 |
Msa0022160 | AT3G04030.1 | 50.000 | 80 | 38 | 1 | 434 | 511 | 41 | 120 | 4.58e-20 | 92.8 |
Msa0022160 | AT2G01060.2 | 51.639 | 122 | 53 | 4 | 291 | 409 | 1 | 119 | 1.43e-29 | 117 |
Msa0022160 | AT3G04450.3 | 49.541 | 109 | 48 | 3 | 208 | 316 | 197 | 298 | 8.82e-26 | 108 |
Msa0022160 | AT3G04450.3 | 50.588 | 85 | 41 | 1 | 414 | 498 | 215 | 298 | 3.52e-22 | 97.8 |
Msa0022160 | AT3G12730.1 | 39.645 | 169 | 85 | 7 | 256 | 407 | 23 | 191 | 2.41e-25 | 105 |
Msa0022160 | AT3G12730.1 | 49.275 | 69 | 34 | 1 | 440 | 507 | 25 | 93 | 2.43e-15 | 76.3 |
Msa0022160 | AT5G29000.4 | 63.768 | 69 | 25 | 0 | 251 | 319 | 226 | 294 | 1.05e-24 | 105 |
Msa0022160 | AT5G29000.4 | 49.425 | 87 | 42 | 1 | 430 | 514 | 223 | 309 | 6.72e-22 | 97.1 |
Msa0022160 | AT3G04030.5 | 44.882 | 127 | 48 | 4 | 288 | 397 | 1 | 122 | 3.05e-18 | 86.3 |
Msa0022160 | AT1G79430.1 | 42.857 | 105 | 53 | 3 | 288 | 386 | 1 | 104 | 1.09e-17 | 84.3 |
Msa0022160 | AT4G04605.1 | 54.412 | 68 | 31 | 0 | 245 | 312 | 3 | 70 | 1.75e-16 | 79.0 |
Msa0022160 | AT4G04605.1 | 50.000 | 68 | 34 | 0 | 427 | 494 | 3 | 70 | 5.38e-14 | 72.0 |
Msa0022160 | AT2G42660.1 | 53.731 | 67 | 31 | 0 | 254 | 320 | 48 | 114 | 3.02e-16 | 79.3 |
Msa0022160 | AT2G42660.1 | 50.746 | 67 | 31 | 1 | 440 | 506 | 52 | 116 | 3.98e-14 | 72.8 |
Msa0022160 | AT2G06020.1 | 46.053 | 76 | 40 | 1 | 237 | 312 | 68 | 142 | 1.99e-15 | 77.8 |
Msa0022160 | AT2G06020.1 | 47.273 | 55 | 29 | 0 | 440 | 494 | 88 | 142 | 8.52e-12 | 66.6 |
Msa0022160 | AT2G38300.1 | 55.556 | 63 | 27 | 1 | 258 | 320 | 56 | 117 | 2.57e-15 | 77.8 |
Msa0022160 | AT2G38300.1 | 56.364 | 55 | 24 | 0 | 440 | 494 | 56 | 110 | 6.73e-14 | 73.6 |
Msa0022160 | AT2G02060.2 | 49.383 | 81 | 33 | 1 | 237 | 309 | 2 | 82 | 2.73e-15 | 76.3 |
Msa0022160 | AT2G02060.2 | 59.615 | 52 | 21 | 0 | 440 | 491 | 31 | 82 | 1.82e-13 | 70.9 |
Msa0022160 | AT2G02060.1 | 49.383 | 81 | 33 | 1 | 237 | 309 | 2 | 82 | 2.73e-15 | 76.3 |
Msa0022160 | AT2G02060.1 | 59.615 | 52 | 21 | 0 | 440 | 491 | 31 | 82 | 1.82e-13 | 70.9 |
Msa0022160 | AT1G14600.1 | 60.000 | 55 | 22 | 0 | 258 | 312 | 25 | 79 | 7.15e-15 | 75.1 |
Msa0022160 | AT1G14600.1 | 56.364 | 55 | 24 | 0 | 440 | 494 | 25 | 79 | 1.75e-13 | 70.9 |
Msa0022160 | AT1G32240.2 | 60.000 | 55 | 22 | 0 | 258 | 312 | 215 | 269 | 8.62e-15 | 76.6 |
Msa0022160 | AT1G32240.2 | 54.545 | 55 | 25 | 0 | 440 | 494 | 215 | 269 | 3.18e-12 | 68.6 |
Msa0022160 | AT5G16560.1 | 60.000 | 55 | 22 | 0 | 258 | 312 | 221 | 275 | 8.67e-15 | 77.0 |
Msa0022160 | AT5G16560.1 | 52.459 | 61 | 29 | 0 | 440 | 500 | 221 | 281 | 1.80e-13 | 72.8 |
Msa0022160 | AT1G32240.1 | 55.738 | 61 | 27 | 0 | 258 | 318 | 215 | 275 | 9.54e-15 | 76.6 |
Msa0022160 | AT1G32240.1 | 50.820 | 61 | 30 | 0 | 440 | 500 | 215 | 275 | 3.34e-12 | 68.9 |
Msa0022160 | AT5G18240.6 | 39.370 | 127 | 49 | 5 | 288 | 397 | 1 | 116 | 1.42e-14 | 75.5 |
Msa0022160 | AT5G42630.2 | 44.828 | 87 | 42 | 1 | 258 | 338 | 107 | 193 | 1.85e-14 | 73.2 |
Msa0022160 | AT5G42630.2 | 47.692 | 65 | 32 | 1 | 440 | 502 | 107 | 171 | 1.23e-11 | 65.1 |
Msa0022160 | AT4G17695.1 | 60.000 | 55 | 22 | 0 | 258 | 312 | 166 | 220 | 1.97e-14 | 75.1 |
Msa0022160 | AT4G17695.1 | 50.820 | 61 | 30 | 0 | 440 | 500 | 166 | 226 | 1.29e-12 | 69.3 |
Msa0022160 | AT2G40260.1 | 48.718 | 78 | 34 | 2 | 431 | 503 | 70 | 146 | 2.10e-14 | 75.9 |
Msa0022160 | AT2G40260.1 | 56.522 | 69 | 25 | 2 | 249 | 312 | 70 | 138 | 2.74e-14 | 75.5 |
Msa0022160 | AT5G42630.1 | 44.828 | 87 | 42 | 1 | 258 | 338 | 107 | 193 | 2.75e-14 | 73.9 |
Msa0022160 | AT5G42630.1 | 47.692 | 65 | 32 | 1 | 440 | 502 | 107 | 171 | 1.53e-11 | 65.5 |
Msa0022160 | AT4G04580.1 | 49.231 | 65 | 33 | 0 | 245 | 309 | 3 | 67 | 1.37e-13 | 69.3 |
Msa0022160 | AT4G04580.1 | 47.692 | 65 | 34 | 0 | 427 | 491 | 3 | 67 | 7.60e-13 | 67.0 |
Msa0022160 | AT4G37180.1 | 62.264 | 53 | 20 | 0 | 258 | 310 | 212 | 264 | 1.61e-13 | 72.4 |
Msa0022160 | AT4G37180.2 | 62.264 | 53 | 20 | 0 | 258 | 310 | 219 | 271 | 2.16e-13 | 72.4 |
Msa0022160 | AT3G04030.4 | 41.732 | 127 | 46 | 5 | 288 | 397 | 1 | 116 | 2.17e-13 | 71.6 |
Msa0022160 | AT2G03500.1 | 50.000 | 70 | 32 | 1 | 256 | 322 | 233 | 302 | 2.43e-12 | 69.3 |
Msa0022160 | AT2G03500.1 | 47.761 | 67 | 35 | 0 | 440 | 506 | 235 | 301 | 7.11e-12 | 68.2 |
Msa0022160 | AT5G58080.1 | 53.226 | 62 | 28 | 1 | 249 | 310 | 187 | 247 | 6.55e-12 | 68.6 |
Msa0022160 | AT4G04555.1 | 51.471 | 68 | 28 | 1 | 250 | 312 | 3 | 70 | 2.17e-11 | 61.2 |
Msa0022160 | AT4G37180.3 | 61.224 | 49 | 19 | 0 | 258 | 306 | 212 | 260 | 3.85e-11 | 64.3 |
Msa0022160 | AT3G25790.1 | 50.000 | 58 | 29 | 0 | 261 | 318 | 201 | 258 | 7.07e-11 | 64.3 |
Find 78 sgRNAs with CRISPR-Local
Find 288 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCAATTGAACACTCAAAATT+TGG | 0.191936 | 1_1:-41247242 | Msa0022160:CDS |
TCAATATCTTTAGGACTAAT+TGG | 0.223277 | 1_1:+41247196 | None:intergenic |
TAAAATCACCATTTAGTATA+TGG | 0.227162 | 1_1:+41250591 | None:intergenic |
TTCTAATAAGGTTAATGATT+TGG | 0.230770 | 1_1:-41250288 | Msa0022160:CDS |
TTTCCATTAGAATGAATTAA+TGG | 0.240080 | 1_1:+41250047 | None:intergenic |
ATGAGAAATGCTTCAAATAT+TGG | 0.255048 | 1_1:-41250530 | Msa0022160:CDS |
TCCATTACAAGCAGGGTTTC+CGG | 0.258363 | 1_1:+41249808 | None:intergenic |
GAGAATAAGATTGATTATTT+AGG | 0.265006 | 1_1:-41250629 | Msa0022160:CDS |
CAACAAAACCATATACTAAA+TGG | 0.279757 | 1_1:-41250599 | Msa0022160:CDS |
ATCAGCATTAATATAGCTTT+TGG | 0.283859 | 1_1:+41245707 | None:intergenic |
AGTCCATTAATTCATTCTAA+TGG | 0.307810 | 1_1:-41250050 | Msa0022160:CDS |
CCAACAATGTCCACAATTCC+TGG | 0.309255 | 1_1:-41246137 | Msa0022160:CDS |
TACTACTTGTCTTCTGTTGT+TGG | 0.310590 | 1_1:+41247269 | None:intergenic |
CCCTGCTTGTAATGGATCTT+CGG | 0.348408 | 1_1:-41249801 | Msa0022160:CDS |
AAATTACCTTGAGCTTGTTC+TGG | 0.349173 | 1_1:+41249272 | None:intergenic |
GGAAATGTCTCAACGAATTC+CGG | 0.350677 | 1_1:-41249827 | Msa0022160:CDS |
CAACACCGAAAGCGATATTA+AGG | 0.350678 | 1_1:-41249370 | Msa0022160:CDS |
ACTCAAAATTGTGGCTAGAT+TGG | 0.356646 | 1_1:+41250216 | None:intergenic |
CCATTAGTAGCAGGGTTTCC+AGG | 0.358671 | 1_1:+41246119 | None:intergenic |
ACATTTCCTGTTGACATAGT+TGG | 0.376397 | 1_1:+41249842 | None:intergenic |
ATGGTAACCTCAATATCTTT+AGG | 0.378705 | 1_1:+41247187 | None:intergenic |
CCAGGAATTGTGGACATTGT+TGG | 0.385875 | 1_1:+41246137 | None:intergenic |
ATCAGCCTTAATATCGCTTT+CGG | 0.385906 | 1_1:+41249365 | None:intergenic |
GAAAATTGAGATATCAAAAG+AGG | 0.399023 | 1_1:+41250311 | None:intergenic |
CTCTCTCCAACTATGTCAAC+AGG | 0.402161 | 1_1:-41249848 | Msa0022160:CDS |
ATACATGGCTGAACCAGCTC+AGG | 0.417044 | 1_1:-41245621 | Msa0022160:CDS |
CCTGGAAACCCTGCTACTAA+TGG | 0.418539 | 1_1:-41246119 | Msa0022160:CDS |
CCACAATATGATTACCAAGT+TGG | 0.422118 | 1_1:-41250350 | Msa0022160:CDS |
GGAATTCCCTTTGTATCAAA+GGG | 0.429673 | 1_1:-41250267 | Msa0022160:CDS |
TACTACTTTCATTTCCAACT+TGG | 0.455279 | 1_1:+41250336 | None:intergenic |
TTCTATAATGTAAAGTACCT+TGG | 0.459415 | 1_1:-41245566 | Msa0022160:intron |
TGGAATTCCCTTTGTATCAA+AGG | 0.460488 | 1_1:-41250268 | Msa0022160:CDS |
AAAATTACAATTGCGAATAG+AGG | 0.460707 | 1_1:-41247323 | Msa0022160:CDS |
TCCGGAAACCCTGCTTGTAA+TGG | 0.462303 | 1_1:-41249809 | Msa0022160:CDS |
ACAAACTTCTCATGAAGGTC+AGG | 0.464082 | 1_1:+41246059 | None:intergenic |
CTGAAGTTGGTGACTCAAAA+CGG | 0.487919 | 1_1:+41250405 | None:intergenic |
AAAAGCTATATTAATGCTGA+TGG | 0.488564 | 1_1:-41245705 | Msa0022160:CDS |
ACTGATGAACCATTAGTAGC+AGG | 0.494537 | 1_1:+41246110 | None:intergenic |
ATTGGTTTGATGTTGAATCA+AGG | 0.496222 | 1_1:+41250234 | None:intergenic |
CTCCAAGAAAATTCCCACAT+TGG | 0.501031 | 1_1:+41250135 | None:intergenic |
CCAACTTGGTAATCATATTG+TGG | 0.502891 | 1_1:+41250350 | None:intergenic |
AATTAGTCCTAAAGATATTG+AGG | 0.504863 | 1_1:-41247194 | Msa0022160:intron |
GTTGAGTGTGTGAATCGCCT+TGG | 0.509079 | 1_1:-41246038 | Msa0022160:CDS |
GTTGAGTGTGTGAATCGCCT+TGG | 0.509079 | 1_1:-41249728 | Msa0022160:CDS |
AGCAGGGTTTCCAGGAATTG+TGG | 0.519005 | 1_1:+41246127 | None:intergenic |
TTATGCAACTGAAATTTGCA+TGG | 0.523528 | 1_1:-41250378 | Msa0022160:CDS |
CCAGCTCAGGGTAATTCTCT+AGG | 0.523554 | 1_1:-41245608 | Msa0022160:CDS |
CAAGTAAAACACGAATAAGA+TGG | 0.534054 | 1_1:-41249775 | Msa0022160:CDS |
ACCGAAGATCCATTACAAGC+AGG | 0.535701 | 1_1:+41249800 | None:intergenic |
CCTAGAGAATTACCCTGAGC+TGG | 0.543208 | 1_1:+41245608 | None:intergenic |
CAGTGGCTTGCAAATTAGAG+AGG | 0.550038 | 1_1:-41248197 | Msa0022160:CDS |
CTGATGAACCATTAGTAGCA+GGG | 0.553912 | 1_1:+41246111 | None:intergenic |
CCGAAGATCCATTACAAGCA+GGG | 0.557698 | 1_1:+41249801 | None:intergenic |
TATGCAACTGAAATTTGCAT+GGG | 0.562190 | 1_1:-41250377 | Msa0022160:CDS |
CAAAACCAAAACCAAGGACA+AGG | 0.566148 | 1_1:-41250455 | Msa0022160:CDS |
AATTTGACAACTCAAAATTG+TGG | 0.568956 | 1_1:+41250207 | None:intergenic |
AAAATTGAGATATCAAAAGA+GGG | 0.579511 | 1_1:+41250312 | None:intergenic |
AGCTGCAGCTAGACGTTCAG+AGG | 0.587380 | 1_1:-41248168 | Msa0022160:CDS |
GAAAGCGATATTAAGGCTGA+TGG | 0.589838 | 1_1:-41249363 | Msa0022160:CDS |
ATATAGAATTGCAAAATACA+TGG | 0.592697 | 1_1:-41245636 | Msa0022160:CDS |
GAGTGTGTGAATCGCCTTGG+TGG | 0.595652 | 1_1:-41246035 | Msa0022160:CDS |
GAGTGTGTGAATCGCCTTGG+TGG | 0.595652 | 1_1:-41249725 | Msa0022160:CDS |
ACTCAACAAACTTCTCATGA+AGG | 0.598469 | 1_1:+41246054 | None:intergenic |
TTAAGGCTGATGGATTCAGA+TGG | 0.601499 | 1_1:-41249353 | Msa0022160:CDS |
AATCCAATAAAATCCAATGT+GGG | 0.615499 | 1_1:-41250148 | Msa0022160:CDS |
AAATCCAATAAAATCCAATG+TGG | 0.616777 | 1_1:-41250149 | Msa0022160:CDS |
CAACAGAAGACAAGTAGTAG+TGG | 0.631876 | 1_1:-41247265 | Msa0022160:CDS |
TTAATGCTGATGGATTCAGA+TGG | 0.633783 | 1_1:-41245695 | Msa0022160:CDS |
GCGTCTTCATGAACAACTAG+AGG | 0.636358 | 1_1:-41248146 | Msa0022160:intron |
CAAGTAATACAAGAATAACA+TGG | 0.643229 | 1_1:-41246085 | Msa0022160:CDS |
GATGATTGTTCCATAACCAA+TGG | 0.643571 | 1_1:+41250494 | None:intergenic |
TATATGCCAGAACAAGCTCA+AGG | 0.643937 | 1_1:-41249278 | Msa0022160:intron |
TACATGGCTGAACCAGCTCA+GGG | 0.652414 | 1_1:-41245620 | Msa0022160:CDS |
CAAAGTCAAAACCAAAACCA+AGG | 0.666219 | 1_1:-41250461 | Msa0022160:CDS |
TAATGGACTCATACTAACTG+AGG | 0.670460 | 1_1:+41250064 | None:intergenic |
ACTTACTCTCGGCACCACCA+AGG | 0.691778 | 1_1:+41249711 | None:intergenic |
ACTAACTCTCGGCACCACCA+AGG | 0.694145 | 1_1:+41246021 | None:intergenic |
CAATTGCGAATAGAGGAACA+AGG | 0.704087 | 1_1:-41247316 | Msa0022160:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AACAATAAAAGTAAATTATA+AGG | + | chr1_1:41245567-41245586 | None:intergenic | 10.0% |
!! | AATTATTAAATGATAAATAG+AGG | - | chr1_1:41247028-41247047 | Msa0022160:intron | 10.0% |
!! | TAATAAGAAAAAAAAATCAA+AGG | - | chr1_1:41247935-41247954 | Msa0022160:intron | 10.0% |
!!! | AATTTGAAATAAAATAATGA+CGG | - | chr1_1:41248948-41248967 | Msa0022160:intron | 10.0% |
!!! | ATTTATCATTTTAATAATTC+AGG | + | chr1_1:41249265-41249284 | None:intergenic | 10.0% |
!!! | AAATATTTACATTTTTTTGT+GGG | + | chr1_1:41249786-41249805 | None:intergenic | 10.0% |
!!! | TAAATATTTACATTTTTTTG+TGG | + | chr1_1:41249787-41249806 | None:intergenic | 10.0% |
!!! | TTGTTTCTATTTTCATTTAT+TGG | - | chr1_1:41245582-41245601 | Msa0022160:CDS | 15.0% |
!!! | TTCTTGATTGTTTATTTTAT+CGG | + | chr1_1:41245911-41245930 | None:intergenic | 15.0% |
!! | TTAGAATTTATATTCAGTAA+GGG | + | chr1_1:41247155-41247174 | None:intergenic | 15.0% |
!!! | TTTAGAATTTATATTCAGTA+AGG | + | chr1_1:41247156-41247175 | None:intergenic | 15.0% |
!! | TATTATAATAAACAATCACT+CGG | - | chr1_1:41247873-41247892 | Msa0022160:intron | 15.0% |
!! | TCTAAGAAAATAAAAAACTT+CGG | - | chr1_1:41247966-41247985 | Msa0022160:intron | 15.0% |
!!! | AATTTTCTTACATTAATTTC+TGG | - | chr1_1:41248193-41248212 | Msa0022160:CDS | 15.0% |
!!! | ATACTTTTATTTACTGAATT+TGG | + | chr1_1:41248488-41248507 | None:intergenic | 15.0% |
!! | AAAATTAACCAAATATAATG+TGG | + | chr1_1:41248552-41248571 | None:intergenic | 15.0% |
!! | GGATTAAATAAAGATATATA+TGG | + | chr1_1:41248996-41249015 | None:intergenic | 15.0% |
!!! | TAATTCAAACTATTTAACTT+AGG | + | chr1_1:41249197-41249216 | None:intergenic | 15.0% |
!! | TATTTAATATATGATTGTCT+TGG | - | chr1_1:41249801-41249820 | Msa0022160:CDS | 15.0% |
!! | ATCTGTAAAAAAAATTATGA+AGG | + | chr1_1:41250262-41250281 | None:intergenic | 15.0% |
!! | GAGAATAAGATTGATTATTT+AGG | - | chr1_1:41244924-41244943 | Msa0022160:CDS | 20.0% |
!! | TAAAATCACCATTTAGTATA+TGG | + | chr1_1:41244965-41244984 | None:intergenic | 20.0% |
!! | AAAATTGAGATATCAAAAGA+GGG | + | chr1_1:41245244-41245263 | None:intergenic | 20.0% |
!!! | ATCTCAATTTTCTTCTAATA+AGG | - | chr1_1:41245253-41245272 | Msa0022160:intron | 20.0% |
!! | TTCTAATAAGGTTAATGATT+TGG | - | chr1_1:41245265-41245284 | Msa0022160:intron | 20.0% |
!! | TTTCCATTAGAATGAATTAA+TGG | + | chr1_1:41245509-41245528 | None:intergenic | 20.0% |
!! | TATCTATAATGTAAAGTACA+TGG | - | chr1_1:41246348-41246367 | Msa0022160:intron | 20.0% |
!! | TCGATAAGATAAAATAAACT+AGG | - | chr1_1:41246742-41246761 | Msa0022160:intron | 20.0% |
!! | GAATTATAGAACATAACAAT+CGG | + | chr1_1:41247274-41247293 | None:intergenic | 20.0% |
!! | ATTGTTATGTTCTATAATTC+CGG | - | chr1_1:41247274-41247293 | Msa0022160:CDS | 20.0% |
!! | TGTCACAAAATAATGTATAA+AGG | + | chr1_1:41247448-41247467 | None:intergenic | 20.0% |
!! | TGAACTTTAAATTTCATAGA+TGG | + | chr1_1:41247684-41247703 | None:intergenic | 20.0% |
!!! | AATTCAACTATAGATGATTT+TGG | + | chr1_1:41247819-41247838 | None:intergenic | 20.0% |
!!! | AGTTTTTTATTTTCTTAGAC+TGG | + | chr1_1:41247965-41247984 | None:intergenic | 20.0% |
!!! | AAAACCATACAATTTTGTAA+TGG | - | chr1_1:41248432-41248451 | Msa0022160:intron | 20.0% |
!!! | AAACCATACAATTTTGTAAT+GGG | - | chr1_1:41248433-41248452 | Msa0022160:intron | 20.0% |
!! | TACAAATCAGAAAAACAAAA+AGG | - | chr1_1:41248812-41248831 | Msa0022160:intron | 20.0% |
!!! | GATGAAATTTCTATTTTGTT+TGG | + | chr1_1:41249041-41249060 | None:intergenic | 20.0% |
!!! | TAAATGATTTGTGATTTCTA+CGG | - | chr1_1:41249337-41249356 | Msa0022160:CDS | 20.0% |
!! | TTACCGATAAAATAAACATT+AGG | - | chr1_1:41249595-41249614 | Msa0022160:intron | 20.0% |
!! | TACCGATAAAATAAACATTA+GGG | - | chr1_1:41249596-41249615 | Msa0022160:intron | 20.0% |
!! | AAATGATGTTAGAAAGTAAA+TGG | - | chr1_1:41249754-41249773 | Msa0022160:CDS | 20.0% |
!! | TTAAATTTCCATTGAAGTTT+AGG | + | chr1_1:41250304-41250323 | None:intergenic | 20.0% |
!!! | CAATGGAAATTTAATGTTTT+AGG | - | chr1_1:41250310-41250329 | Msa0022160:CDS | 20.0% |
!!! | ATTTAATGTTTTAGGAAACT+CGG | - | chr1_1:41250318-41250337 | Msa0022160:CDS | 20.0% |
! | CAACAAAACCATATACTAAA+TGG | - | chr1_1:41244954-41244973 | Msa0022160:CDS | 25.0% |
! | ATGAGAAATGCTTCAAATAT+TGG | - | chr1_1:41245023-41245042 | Msa0022160:intron | 25.0% |
! | GAAAATTGAGATATCAAAAG+AGG | + | chr1_1:41245245-41245264 | None:intergenic | 25.0% |
! | AATTTGACAACTCAAAATTG+TGG | + | chr1_1:41245349-41245368 | None:intergenic | 25.0% |
!! | TGGATTTTATTGGATTTTTC+AGG | + | chr1_1:41245401-41245420 | None:intergenic | 25.0% |
! | AAATCCAATAAAATCCAATG+TGG | - | chr1_1:41245404-41245423 | Msa0022160:intron | 25.0% |
! | AATCCAATAAAATCCAATGT+GGG | - | chr1_1:41245405-41245424 | Msa0022160:intron | 25.0% |
! | AGTCCATTAATTCATTCTAA+TGG | - | chr1_1:41245503-41245522 | Msa0022160:intron | 25.0% |
! | AAAGAGAAGATGAAAGATAA+CGG | + | chr1_1:41246050-41246069 | None:intergenic | 25.0% |
! | TGTGGTTATAAACTAATCTA+AGG | - | chr1_1:41246445-41246464 | Msa0022160:intron | 25.0% |
!!! | TTGTTTTTCTCACTTCTTAT+TGG | - | chr1_1:41246608-41246627 | Msa0022160:intron | 25.0% |
! | TTCTTATTGGTCAAAAACAA+TGG | - | chr1_1:41246621-41246640 | Msa0022160:intron | 25.0% |
! | AAAAAGCTCAAAACAACTTA+TGG | - | chr1_1:41246842-41246861 | Msa0022160:intron | 25.0% |
!! | CTTCTTTATTACAACTTTTC+AGG | + | chr1_1:41246970-41246989 | None:intergenic | 25.0% |
!! | CAACTTTTCTAACATATGAA+AGG | + | chr1_1:41247008-41247027 | None:intergenic | 25.0% |
!!! | TTTCTTTTCATAATTTGCAG+TGG | - | chr1_1:41247339-41247358 | Msa0022160:intron | 25.0% |
! | TATCGTAATATCAAGTTTCA+TGG | + | chr1_1:41247535-41247554 | None:intergenic | 25.0% |
! | ATTATGAGTACGTTGAAATA+CGG | + | chr1_1:41247606-41247625 | None:intergenic | 25.0% |
! | ATATCGGATATGTTTCTTTA+AGG | + | chr1_1:41248009-41248028 | None:intergenic | 25.0% |
! | AAGAAACATATCCGATATTA+TGG | - | chr1_1:41248011-41248030 | Msa0022160:intron | 25.0% |
! | ACTGAAATTCTCCATAATAT+CGG | + | chr1_1:41248025-41248044 | None:intergenic | 25.0% |
! | TAAAAAAATGTCTATGGATG+CGG | + | chr1_1:41248127-41248146 | None:intergenic | 25.0% |
! | GGAGTTTAAAAAAATGTCTA+TGG | + | chr1_1:41248133-41248152 | None:intergenic | 25.0% |
! | AGAAAATACAAATACTAAGC+AGG | + | chr1_1:41248154-41248173 | None:intergenic | 25.0% |
! | AAAATTACAATTGCGAATAG+AGG | - | chr1_1:41248230-41248249 | Msa0022160:intron | 25.0% |
!!! | TCAATATCTTTAGGACTAAT+TGG | + | chr1_1:41248360-41248379 | None:intergenic | 25.0% |
! | AATTAGTCCTAAAGATATTG+AGG | - | chr1_1:41248359-41248378 | Msa0022160:CDS | 25.0% |
! | ATTCCCATTACAAAATTGTA+TGG | + | chr1_1:41248439-41248458 | None:intergenic | 25.0% |
! | CTTGAAAACCACATTATATT+TGG | - | chr1_1:41248541-41248560 | Msa0022160:intron | 25.0% |
! | GAACCTAAAGAATAATTGAA+AGG | + | chr1_1:41248619-41248638 | None:intergenic | 25.0% |
!! | ATTTGAAATTACATGGATGA+TGG | + | chr1_1:41248641-41248660 | None:intergenic | 25.0% |
!! | TGAAGGAATTTGAAATTACA+TGG | + | chr1_1:41248648-41248667 | None:intergenic | 25.0% |
!!! | TATCTTTTGAGTATAGATAC+CGG | + | chr1_1:41249108-41249127 | None:intergenic | 25.0% |
! | CAAGTAATACAAGAATAACA+TGG | - | chr1_1:41249468-41249487 | Msa0022160:intron | 25.0% |
!!! | CTCCCTAATGTTTATTTTAT+CGG | + | chr1_1:41249601-41249620 | None:intergenic | 25.0% |
!! | ATCAGCATTAATATAGCTTT+TGG | + | chr1_1:41249849-41249868 | None:intergenic | 25.0% |
! | AAAAGCTATATTAATGCTGA+TGG | - | chr1_1:41249848-41249867 | Msa0022160:CDS | 25.0% |
!! | TCTTCAAATGACTTTTAACA+TGG | + | chr1_1:41249896-41249915 | None:intergenic | 25.0% |
!! | TTCTATAATGTAAAGTACCT+TGG | - | chr1_1:41249987-41250006 | Msa0022160:intron | 25.0% |
! | GTTGTTTATCTAAATTACCA+AGG | + | chr1_1:41250007-41250026 | None:intergenic | 25.0% |
! | AAGTTATGATTGAGAACTTA+TGG | - | chr1_1:41250122-41250141 | Msa0022160:CDS | 25.0% |
! | ATTGAGAACTTATGGAAATA+AGG | - | chr1_1:41250130-41250149 | Msa0022160:CDS | 25.0% |
! | ATTCTTAACCTAAACTTCAA+TGG | - | chr1_1:41250293-41250312 | Msa0022160:CDS | 25.0% |
!!! | GGTGATTTTAATTCTGAGTT+TGG | - | chr1_1:41244975-41244994 | Msa0022160:intron | 30.0% |
!! | TGGAAATTTTAGTCAACCAT+TGG | - | chr1_1:41245043-41245062 | Msa0022160:intron | 30.0% |
!! | TTTTAGTCAACCATTGGTTA+TGG | - | chr1_1:41245049-41245068 | Msa0022160:intron | 30.0% |
TTATGCAACTGAAATTTGCA+TGG | - | chr1_1:41245175-41245194 | Msa0022160:intron | 30.0% | |
TATGCAACTGAAATTTGCAT+GGG | - | chr1_1:41245176-41245195 | Msa0022160:intron | 30.0% | |
TACTACTTTCATTTCCAACT+TGG | + | chr1_1:41245220-41245239 | None:intergenic | 30.0% | |
! | GATTTTCCCTTTGATACAAA+GGG | + | chr1_1:41245295-41245314 | None:intergenic | 30.0% |
! | TGATTTTCCCTTTGATACAA+AGG | + | chr1_1:41245296-41245315 | None:intergenic | 30.0% |
!! | ATTGGTTTGATGTTGAATCA+AGG | + | chr1_1:41245322-41245341 | None:intergenic | 30.0% |
!! | TTTTCAGGAGATCTAAGAAT+TGG | + | chr1_1:41245386-41245405 | None:intergenic | 30.0% |
! | ATTCCCACATTGGATTTTAT+TGG | + | chr1_1:41245411-41245430 | None:intergenic | 30.0% |
! | TGTGGTTCATATGATTTTCA+TGG | - | chr1_1:41245648-41245667 | Msa0022160:CDS | 30.0% |
CAAGTAAAACACGAATAAGA+TGG | - | chr1_1:41245778-41245797 | Msa0022160:intron | 30.0% | |
CGAAAATTTGATTGTGTTCT+TGG | - | chr1_1:41246143-41246162 | Msa0022160:CDS | 30.0% | |
! | TCTGCAAATGACTTTTAACA+TGG | + | chr1_1:41246238-41246257 | None:intergenic | 30.0% |
ACATGGTGTATGAATTTAAC+AGG | - | chr1_1:41246365-41246384 | Msa0022160:intron | 30.0% | |
TCAACAAAGTTGTCATCAAA+TGG | + | chr1_1:41246583-41246602 | None:intergenic | 30.0% | |
AAAACAATGGAGAGAGAAAA+AGG | - | chr1_1:41246634-41246653 | Msa0022160:intron | 30.0% | |
GTCAAAAAGTTGTCAAAAAG+TGG | - | chr1_1:41246701-41246720 | Msa0022160:intron | 30.0% | |
AAGTGAAGATTAAGACTAAC+TGG | + | chr1_1:41247093-41247112 | None:intergenic | 30.0% | |
AGTCTTAATCTTCACTTCAA+TGG | - | chr1_1:41247096-41247115 | Msa0022160:intron | 30.0% | |
ACAAACTGTTAACATGTTTC+AGG | - | chr1_1:41247175-41247194 | Msa0022160:intron | 30.0% | |
CAAACTGTTAACATGTTTCA+GGG | - | chr1_1:41247176-41247195 | Msa0022160:intron | 30.0% | |
AAGTAAGTAGCATTACGATT+TGG | + | chr1_1:41247245-41247264 | None:intergenic | 30.0% | |
TAATATCAAGTTTCATGGAG+CGG | + | chr1_1:41247530-41247549 | None:intergenic | 30.0% | |
!! | GTACTCATAATTTGTTATCG+AGG | - | chr1_1:41247615-41247634 | Msa0022160:intron | 30.0% |
! | TTATCGAGGTGTTATAATCA+GGG | - | chr1_1:41247629-41247648 | Msa0022160:intron | 30.0% |
!!! | TTTTTTATGTTTAGCGACAG+CGG | + | chr1_1:41248083-41248102 | None:intergenic | 30.0% |
!! | CCAAATTTTGAGTGTTCAAT+TGG | + | chr1_1:41248314-41248333 | None:intergenic | 30.0% |
CCAATTGAACACTCAAAATT+TGG | - | chr1_1:41248311-41248330 | Msa0022160:intron | 30.0% | |
ATGGTAACCTCAATATCTTT+AGG | + | chr1_1:41248369-41248388 | None:intergenic | 30.0% | |
!! | ATTGAGGTTACCATTTTTGA+AGG | - | chr1_1:41248375-41248394 | Msa0022160:intron | 30.0% |
!! | TTGAGGTTACCATTTTTGAA+GGG | - | chr1_1:41248376-41248395 | Msa0022160:intron | 30.0% |
GGTCCTTTCAATTATTCTTT+AGG | - | chr1_1:41248613-41248632 | Msa0022160:intron | 30.0% | |
GTCATATTCAAATAATCACG+TGG | + | chr1_1:41248745-41248764 | None:intergenic | 30.0% | |
GTGATTATTTGAATATGACG+TGG | - | chr1_1:41248746-41248765 | Msa0022160:intron | 30.0% | |
CAGAAAAACAAAAAGGAGTA+TGG | - | chr1_1:41248819-41248838 | Msa0022160:intron | 30.0% | |
TTATCCATTATAGTCCTACA+CGG | - | chr1_1:41248891-41248910 | Msa0022160:intron | 30.0% | |
!!! | TCAAATTTTTTCGGTGTGAA+TGG | + | chr1_1:41248935-41248954 | None:intergenic | 30.0% |
TTGAAGAATTGTTGAGTTTG+TGG | + | chr1_1:41249017-41249036 | None:intergenic | 30.0% | |
TAAATGCATCCGTTTACTTT+CGG | - | chr1_1:41249554-41249573 | Msa0022160:intron | 30.0% | |
TAAATGCGTCCATTTACTTT+CGG | - | chr1_1:41249621-41249640 | Msa0022160:intron | 30.0% | |
TGAAAGTTCGTAATTTCCAT+TGG | + | chr1_1:41250521-41250540 | None:intergenic | 30.0% | |
ATCAACTTTACTTCCTTTAG+TGG | - | chr1_1:41250545-41250564 | Msa0022160:CDS | 30.0% | |
TTAGACTTTAGATCCACTAA+AGG | + | chr1_1:41250561-41250580 | None:intergenic | 30.0% | |
ACAAACTGTTATCATGTTTC+AGG | - | chr1_1:41250580-41250599 | Msa0022160:CDS | 30.0% | |
CAAACTGTTATCATGTTTCA+GGG | - | chr1_1:41250581-41250600 | Msa0022160:CDS | 30.0% | |
AAACTGTTATCATGTTTCAG+GGG | - | chr1_1:41250582-41250601 | Msa0022160:CDS | 30.0% | |
GATGATTGTTCCATAACCAA+TGG | + | chr1_1:41245062-41245081 | None:intergenic | 35.0% | |
!!! | CTTGGTTTTGGTTTTGACTT+TGG | + | chr1_1:41245094-41245113 | None:intergenic | 35.0% |
CAAAGTCAAAACCAAAACCA+AGG | - | chr1_1:41245092-41245111 | Msa0022160:intron | 35.0% | |
! | ATTTTCCTTGTCCTTGGTTT+TGG | + | chr1_1:41245106-41245125 | None:intergenic | 35.0% |
! | ATGATGATTTTCCTTGTCCT+TGG | + | chr1_1:41245112-41245131 | None:intergenic | 35.0% |
GTTGCATAAAAAGCTGAAGT+TGG | + | chr1_1:41245164-41245183 | None:intergenic | 35.0% | |
! | CCAACTTGGTAATCATATTG+TGG | + | chr1_1:41245206-41245225 | None:intergenic | 35.0% |
CCACAATATGATTACCAAGT+TGG | - | chr1_1:41245203-41245222 | Msa0022160:intron | 35.0% | |
TGGAATTCCCTTTGTATCAA+AGG | - | chr1_1:41245285-41245304 | Msa0022160:intron | 35.0% | |
GGAATTCCCTTTGTATCAAA+GGG | - | chr1_1:41245286-41245305 | Msa0022160:intron | 35.0% | |
ACTCAAAATTGTGGCTAGAT+TGG | + | chr1_1:41245340-41245359 | None:intergenic | 35.0% | |
! | ATCCAATGTGGGAATTTTCT+TGG | - | chr1_1:41245416-41245435 | Msa0022160:intron | 35.0% |
!! | TAATGGACTCATACTAACTG+AGG | + | chr1_1:41245492-41245511 | None:intergenic | 35.0% |
! | TCGAATCTTTCGTGTTTTGT+AGG | - | chr1_1:41245620-41245639 | Msa0022160:CDS | 35.0% |
ACATTTCCTGTTGACATAGT+TGG | + | chr1_1:41245714-41245733 | None:intergenic | 35.0% | |
!! | TAAATGCATCGGTTTACTTC+TGG | - | chr1_1:41245864-41245883 | Msa0022160:intron | 35.0% |
ATCAGCCTTAATATCGCTTT+CGG | + | chr1_1:41246191-41246210 | None:intergenic | 35.0% | |
! | AAATTACCTTGAGCTTGTTC+TGG | + | chr1_1:41246284-41246303 | None:intergenic | 35.0% |
!! | AAACTAATCTAAGGCACTGT+TGG | - | chr1_1:41246454-41246473 | Msa0022160:intron | 35.0% |
! | AAACTGTTGGAGATTGGTTA+TGG | + | chr1_1:41246886-41246905 | None:intergenic | 35.0% |
CTTATGAAACTGTTGGAGAT+TGG | + | chr1_1:41246892-41246911 | None:intergenic | 35.0% | |
ACAAGCACTTATGAAACTGT+TGG | + | chr1_1:41246899-41246918 | None:intergenic | 35.0% | |
AACAGTTTCATAAGTGCTTG+TGG | - | chr1_1:41246898-41246917 | Msa0022160:intron | 35.0% | |
! | TCTACATGAGTTCTTTTCTC+GGG | + | chr1_1:41247205-41247224 | None:intergenic | 35.0% |
! | CTCTACATGAGTTCTTTTCT+CGG | + | chr1_1:41247206-41247225 | None:intergenic | 35.0% |
! | GTTATCGAGGTGTTATAATC+AGG | - | chr1_1:41247628-41247647 | Msa0022160:intron | 35.0% |
CCTCTAATCAAATCCAAACA+TGG | + | chr1_1:41247661-41247680 | None:intergenic | 35.0% | |
CCATGTTTGGATTTGATTAG+AGG | - | chr1_1:41247658-41247677 | Msa0022160:intron | 35.0% | |
TACTACTTGTCTTCTGTTGT+TGG | + | chr1_1:41248287-41248306 | None:intergenic | 35.0% | |
AGAATGAGACCCTTCAAAAA+TGG | + | chr1_1:41248388-41248407 | None:intergenic | 35.0% | |
GACATAAGGTCTACATATGA+AGG | + | chr1_1:41248665-41248684 | None:intergenic | 35.0% | |
GTTGAGAATGCTATGACATA+AGG | + | chr1_1:41248679-41248698 | None:intergenic | 35.0% | |
TCAACCCTTTAGTTATGACT+TGG | - | chr1_1:41248694-41248713 | Msa0022160:intron | 35.0% | |
TGTGCCAAGTCATAACTAAA+GGG | + | chr1_1:41248701-41248720 | None:intergenic | 35.0% | |
TTGTGCCAAGTCATAACTAA+AGG | + | chr1_1:41248702-41248721 | None:intergenic | 35.0% | |
TTTGAATATGACGTGGCTTT+AGG | - | chr1_1:41248753-41248772 | Msa0022160:intron | 35.0% | |
! | TTGAAGTATCTATGCTTCTG+AGG | + | chr1_1:41249072-41249091 | None:intergenic | 35.0% |
CTTCAAAATAGACGATGTAC+CGG | - | chr1_1:41249086-41249105 | Msa0022160:intron | 35.0% | |
TATCGTCTTTCTACATTTCG+TGG | + | chr1_1:41249146-41249165 | None:intergenic | 35.0% | |
GTATCTTTCTCATGTAGCAT+AGG | + | chr1_1:41249172-41249191 | None:intergenic | 35.0% | |
! | TCAGGTTTTCTAACATCTGA+AGG | + | chr1_1:41249247-41249266 | None:intergenic | 35.0% |
CTGAGAAATGTCTATAGCAT+AGG | + | chr1_1:41249299-41249318 | None:intergenic | 35.0% | |
ACTCAACAAACTTCTCATGA+AGG | + | chr1_1:41245812-41245831 | None:intergenic | 35.0% | |
CAGAAAACACCGAAAGTAAA+CGG | + | chr1_1:41249566-41249585 | None:intergenic | 35.0% | |
CAGTTAACACCGAAAGTAAA+TGG | + | chr1_1:41249633-41249652 | None:intergenic | 35.0% | |
!!! | TTACATTTTTTTGTGGGCTG+TGG | + | chr1_1:41249780-41249799 | None:intergenic | 35.0% |
!! | TTAATGCTGATGGATTCAGA+TGG | - | chr1_1:41249858-41249877 | Msa0022160:CDS | 35.0% |
ATTATGAAGGCTGTTCTGAT+CGG | + | chr1_1:41250249-41250268 | None:intergenic | 35.0% | |
!!! | GTTTTAGGAAACTCGGAATA+TGG | - | chr1_1:41250325-41250344 | Msa0022160:CDS | 35.0% |
CAAAACCAAAACCAAGGACA+AGG | - | chr1_1:41245098-41245117 | Msa0022160:intron | 40.0% | |
!! | CTGAAGTTGGTGACTCAAAA+CGG | + | chr1_1:41245151-41245170 | None:intergenic | 40.0% |
CTCCAAGAAAATTCCCACAT+TGG | + | chr1_1:41245421-41245440 | None:intergenic | 40.0% | |
! | CGTGTTTTGTAGGTTTCTTG+TGG | - | chr1_1:41245630-41245649 | Msa0022160:CDS | 40.0% |
GGAAATGTCTCAACGAATTC+CGG | - | chr1_1:41245726-41245745 | Msa0022160:intron | 40.0% | |
CCGATGCATTTACTTACTCT+CGG | + | chr1_1:41245856-41245875 | None:intergenic | 40.0% | |
CCGAGAGTAAGTAAATGCAT+CGG | - | chr1_1:41245853-41245872 | Msa0022160:intron | 40.0% | |
CAACACCGAAAGCGATATTA+AGG | - | chr1_1:41246183-41246202 | Msa0022160:intron | 40.0% | |
GAAAGCGATATTAAGGCTGA+TGG | - | chr1_1:41246190-41246209 | Msa0022160:intron | 40.0% | |
!! | TTAAGGCTGATGGATTCAGA+TGG | - | chr1_1:41246200-41246219 | Msa0022160:intron | 40.0% |
TATATGCCAGAACAAGCTCA+AGG | - | chr1_1:41246275-41246294 | Msa0022160:intron | 40.0% | |
TGACATAGAGCTTAGAACAC+AGG | - | chr1_1:41246419-41246438 | Msa0022160:intron | 40.0% | |
GACATAGAGCTTAGAACACA+GGG | - | chr1_1:41246420-41246439 | Msa0022160:intron | 40.0% | |
ACATAGAGCTTAGAACACAG+GGG | - | chr1_1:41246421-41246440 | Msa0022160:intron | 40.0% | |
AGAGAGAAAAAGGAAGAGAG+AGG | - | chr1_1:41246644-41246663 | Msa0022160:intron | 40.0% | |
GCTCAAAACAACTTATGGAC+AGG | - | chr1_1:41246847-41246866 | Msa0022160:intron | 40.0% | |
TAAGCGAGAAATGATTGCAC+CGG | + | chr1_1:41247296-41247315 | None:intergenic | 40.0% | |
ATCAGGGACATATCCATGTT+TGG | - | chr1_1:41247645-41247664 | Msa0022160:intron | 40.0% | |
TCAGTCAAATGTGACTGATG+TGG | - | chr1_1:41248040-41248059 | Msa0022160:intron | 40.0% | |
CAATTGCGAATAGAGGAACA+AGG | - | chr1_1:41248237-41248256 | Msa0022160:intron | 40.0% | |
CAACAGAAGACAAGTAGTAG+TGG | - | chr1_1:41248288-41248307 | Msa0022160:intron | 40.0% | |
! | TTTTGTATCAGCTCAGTGCA+GGG | - | chr1_1:41248592-41248611 | Msa0022160:intron | 40.0% |
! | AAGTATCTATGCTTCTGAGG+TGG | + | chr1_1:41249069-41249088 | None:intergenic | 40.0% |
CTGATGAACCATTAGTAGCA+GGG | + | chr1_1:41249445-41249464 | None:intergenic | 40.0% | |
ACTGATGAACCATTAGTAGC+AGG | + | chr1_1:41249446-41249465 | None:intergenic | 40.0% | |
ACAAACTTCTCATGAAGGTC+AGG | + | chr1_1:41249497-41249516 | None:intergenic | 40.0% | |
CGGATGCATTTACTAACTCT+CGG | + | chr1_1:41249546-41249565 | None:intergenic | 40.0% | |
GGAACTTATAGCTAGAGCTT+TGG | - | chr1_1:41250398-41250417 | Msa0022160:CDS | 40.0% | |
TAGCCCACTGAAATTGACAT+AGG | - | chr1_1:41250423-41250442 | Msa0022160:CDS | 40.0% | |
AGCCCACTGAAATTGACATA+GGG | - | chr1_1:41250424-41250443 | Msa0022160:CDS | 40.0% | |
CTCCCTATGTCAATTTCAGT+GGG | + | chr1_1:41250429-41250448 | None:intergenic | 40.0% | |
TCTCCCTATGTCAATTTCAG+TGG | + | chr1_1:41250430-41250449 | None:intergenic | 40.0% | |
CGTGTTTCTCTTAAGGTTTC+GGG | + | chr1_1:41250461-41250480 | None:intergenic | 40.0% | |
GCGTGTTTCTCTTAAGGTTT+CGG | + | chr1_1:41250462-41250481 | None:intergenic | 40.0% | |
ACGGTGAAAACTTAGAACCT+TGG | + | chr1_1:41250486-41250505 | None:intergenic | 40.0% | |
!!! | GGTTCTAAGTTTTCACCGTT+AGG | - | chr1_1:41250487-41250506 | Msa0022160:CDS | 40.0% |
CTCTCTCCAACTATGTCAAC+AGG | - | chr1_1:41245705-41245724 | Msa0022160:CDS | 45.0% | |
TCCATTACAAGCAGGGTTTC+CGG | + | chr1_1:41245748-41245767 | None:intergenic | 45.0% | |
CCGAAGATCCATTACAAGCA+GGG | + | chr1_1:41245755-41245774 | None:intergenic | 45.0% | |
!! | CCCTGCTTGTAATGGATCTT+CGG | - | chr1_1:41245752-41245771 | Msa0022160:intron | 45.0% |
ACCGAAGATCCATTACAAGC+AGG | + | chr1_1:41245756-41245775 | None:intergenic | 45.0% | |
TCTTGGCTGCTTGATTGTAG+AGG | - | chr1_1:41246160-41246179 | Msa0022160:intron | 45.0% | |
! | CAGTGGCTTGCAAATTAGAG+AGG | - | chr1_1:41247356-41247375 | Msa0022160:intron | 45.0% |
GCGTCTTCATGAACAACTAG+AGG | - | chr1_1:41247407-41247426 | Msa0022160:intron | 45.0% | |
AGACTACACTTCGCAACTAG+AGG | + | chr1_1:41247911-41247930 | None:intergenic | 45.0% | |
GACTGATGTGGCCTCAATTA+TGG | - | chr1_1:41248052-41248071 | Msa0022160:intron | 45.0% | |
AAATGTCTATGGATGCGGTC+TGG | + | chr1_1:41248122-41248141 | None:intergenic | 45.0% | |
! | CTTTTGTATCAGCTCAGTGC+AGG | - | chr1_1:41248591-41248610 | Msa0022160:intron | 45.0% |
ATAATCACGTGGCAATGCAC+CGG | + | chr1_1:41248734-41248753 | None:intergenic | 45.0% | |
TGAGCCGTGTAGGACTATAA+TGG | + | chr1_1:41248898-41248917 | None:intergenic | 45.0% | |
TTATAGTCCTACACGGCTCA+AGG | - | chr1_1:41248898-41248917 | Msa0022160:intron | 45.0% | |
TATAGTCCTACACGGCTCAA+GGG | - | chr1_1:41248899-41248918 | Msa0022160:intron | 45.0% | |
GAGAAGTTCAGTTGCGAAAC+AGG | + | chr1_1:41249374-41249393 | None:intergenic | 45.0% | |
CCAGGAATTGTGGACATTGT+TGG | + | chr1_1:41249419-41249438 | None:intergenic | 45.0% | |
CCAACAATGTCCACAATTCC+TGG | - | chr1_1:41249416-41249435 | Msa0022160:intron | 45.0% | |
TCTTGGCTGCTTGATTGTAG+AGG | - | chr1_1:41246160-41246179 | Msa0022160:intron | 45.0% | |
CTTGGAGCGTGTTTCTCTTA+AGG | + | chr1_1:41250468-41250487 | None:intergenic | 45.0% | |
CTTAAGAGAAACACGCTCCA+AGG | - | chr1_1:41250466-41250485 | Msa0022160:CDS | 45.0% | |
!!! | TATTTTATTTCAAATTTTTT+CGG | + | chr1_1:41248944-41248963 | None:intergenic | 5.0% |
!!! | TTATAAATTTTCTTTTATAT+TGG | + | chr1_1:41249692-41249711 | None:intergenic | 5.0% |
TCCGGAAACCCTGCTTGTAA+TGG | - | chr1_1:41245744-41245763 | Msa0022160:intron | 50.0% | |
GTTGAGTGTGTGAATCGCCT+TGG | - | chr1_1:41245825-41245844 | Msa0022160:intron | 50.0% | |
AGCTTAGAACACAGGGGATG+TGG | - | chr1_1:41246427-41246446 | Msa0022160:intron | 50.0% | |
CTTGGCACAATTTGAGCCAC+CGG | - | chr1_1:41248712-41248731 | Msa0022160:intron | 50.0% | |
!! | CTATGCTTCTGAGGTGGAGA+GGG | + | chr1_1:41249063-41249082 | None:intergenic | 50.0% |
!! | TCTATGCTTCTGAGGTGGAG+AGG | + | chr1_1:41249064-41249083 | None:intergenic | 50.0% |
AGCAGGGTTTCCAGGAATTG+TGG | + | chr1_1:41249429-41249448 | None:intergenic | 50.0% | |
CCATTAGTAGCAGGGTTTCC+AGG | + | chr1_1:41249437-41249456 | None:intergenic | 50.0% | |
CCTGGAAACCCTGCTACTAA+TGG | - | chr1_1:41249434-41249453 | Msa0022160:intron | 50.0% | |
GTTGAGTGTGTGAATCGCCT+TGG | - | chr1_1:41245825-41245844 | Msa0022160:intron | 50.0% | |
ATACATGGCTGAACCAGCTC+AGG | - | chr1_1:41249932-41249951 | Msa0022160:intron | 50.0% | |
TACATGGCTGAACCAGCTCA+GGG | - | chr1_1:41249933-41249952 | Msa0022160:intron | 50.0% | |
CCTAGAGAATTACCCTGAGC+TGG | + | chr1_1:41249948-41249967 | None:intergenic | 50.0% | |
CCAGCTCAGGGTAATTCTCT+AGG | - | chr1_1:41249945-41249964 | Msa0022160:intron | 50.0% | |
TGGTCCAAGACCGAATAGTC+CGG | - | chr1_1:41250345-41250364 | Msa0022160:CDS | 50.0% | |
! | GATTAGTCCCCCGGACTATT+CGG | + | chr1_1:41250358-41250377 | None:intergenic | 50.0% |
TATAAGTTCCCCCCTGCTAG+TGG | + | chr1_1:41250388-41250407 | None:intergenic | 50.0% | |
CCATTGGAGTGTGCTCCTAA+CGG | + | chr1_1:41250505-41250524 | None:intergenic | 50.0% | |
GAGTGTGTGAATCGCCTTGG+TGG | - | chr1_1:41245828-41245847 | Msa0022160:intron | 55.0% | |
ACTTACTCTCGGCACCACCA+AGG | + | chr1_1:41245845-41245864 | None:intergenic | 55.0% | |
AGCTGCAGCTAGACGTTCAG+AGG | - | chr1_1:41247385-41247404 | Msa0022160:intron | 55.0% | |
TATGTTTAGCGACAGCGGCG+TGG | + | chr1_1:41248078-41248097 | None:intergenic | 55.0% | |
CTCTATCCCTTGAGCCGTGT+AGG | + | chr1_1:41248908-41248927 | None:intergenic | 55.0% | |
CTACACGGCTCAAGGGATAG+AGG | - | chr1_1:41248906-41248925 | Msa0022160:intron | 55.0% | |
GAGTGTGTGAATCGCCTTGG+TGG | - | chr1_1:41245828-41245847 | Msa0022160:intron | 55.0% | |
ACTAACTCTCGGCACCACCA+AGG | + | chr1_1:41249535-41249554 | None:intergenic | 55.0% | |
GGTCCAAGACCGAATAGTCC+GGG | - | chr1_1:41250346-41250365 | Msa0022160:CDS | 55.0% | |
GTCCAAGACCGAATAGTCCG+GGG | - | chr1_1:41250347-41250366 | Msa0022160:CDS | 55.0% | |
TCCAAGACCGAATAGTCCGG+GGG | - | chr1_1:41250348-41250367 | Msa0022160:CDS | 55.0% | |
TAATCTCCCCGTCCACTAGC+AGG | - | chr1_1:41250373-41250392 | Msa0022160:CDS | 55.0% | |
AATCTCCCCGTCCACTAGCA+GGG | - | chr1_1:41250374-41250393 | Msa0022160:CDS | 55.0% | |
! | CCGTTAGGAGCACACTCCAA+TGG | - | chr1_1:41250502-41250521 | Msa0022160:CDS | 55.0% |
CAGCGGCGTGGCCATAATTG+AGG | + | chr1_1:41248066-41248085 | None:intergenic | 60.0% | |
ATCACGTGGCAATGCACCGG+TGG | + | chr1_1:41248731-41248750 | None:intergenic | 60.0% | |
TCCCCCGGACTATTCGGTCT+TGG | + | chr1_1:41250352-41250371 | None:intergenic | 60.0% | |
ATCTCCCCGTCCACTAGCAG+GGG | - | chr1_1:41250375-41250394 | Msa0022160:CDS | 60.0% | |
AGTTCCCCCCTGCTAGTGGA+CGG | + | chr1_1:41250384-41250403 | None:intergenic | 60.0% | |
CGGTCTGGACTGCAACAGCG+AGG | + | chr1_1:41248107-41248126 | None:intergenic | 65.0% | |
! | GGACGGGGAGATTAGTCCCC+CGG | + | chr1_1:41250367-41250386 | None:intergenic | 65.0% |
TCTCCCCGTCCACTAGCAGG+GGG | - | chr1_1:41250376-41250395 | Msa0022160:CDS | 65.0% | |
! | TTCCCCCCTGCTAGTGGACG+GGG | + | chr1_1:41250382-41250401 | None:intergenic | 65.0% |
! | GTTCCCCCCTGCTAGTGGAC+GGG | + | chr1_1:41250383-41250402 | None:intergenic | 65.0% |
CTCCCCGTCCACTAGCAGGG+GGG | - | chr1_1:41250377-41250396 | Msa0022160:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1_1 | gene | 41244918 | 41250657 | 41244918 | ID=Msa0022160;Name=Msa0022160 |
chr1_1 | mRNA | 41244918 | 41250657 | 41244918 | ID=Msa0022160-mRNA-1;Parent=Msa0022160;Name=Msa0022160-mRNA-1;_AED=0.09;_eAED=0.09;_QI=0|0.62|0.44|0.88|1|1|9|0|537 |
chr1_1 | exon | 41250034 | 41250657 | 41250034 | ID=Msa0022160-mRNA-1:exon:12232;Parent=Msa0022160-mRNA-1 |
chr1_1 | exon | 41249717 | 41249933 | 41249717 | ID=Msa0022160-mRNA-1:exon:12231;Parent=Msa0022160-mRNA-1 |
chr1_1 | exon | 41249279 | 41249395 | 41249279 | ID=Msa0022160-mRNA-1:exon:12230;Parent=Msa0022160-mRNA-1 |
chr1_1 | exon | 41248327 | 41248378 | 41248327 | ID=Msa0022160-mRNA-1:exon:12229;Parent=Msa0022160-mRNA-1 |
chr1_1 | exon | 41248147 | 41248216 | 41248147 | ID=Msa0022160-mRNA-1:exon:12228;Parent=Msa0022160-mRNA-1 |
chr1_1 | exon | 41247195 | 41247353 | 41247195 | ID=Msa0022160-mRNA-1:exon:12227;Parent=Msa0022160-mRNA-1 |
chr1_1 | exon | 41246027 | 41246174 | 41246027 | ID=Msa0022160-mRNA-1:exon:12226;Parent=Msa0022160-mRNA-1 |
chr1_1 | exon | 41245567 | 41245737 | 41245567 | ID=Msa0022160-mRNA-1:exon:12225;Parent=Msa0022160-mRNA-1 |
chr1_1 | exon | 41244918 | 41244973 | 41244918 | ID=Msa0022160-mRNA-1:exon:12224;Parent=Msa0022160-mRNA-1 |
chr1_1 | CDS | 41250034 | 41250657 | 41250034 | ID=Msa0022160-mRNA-1:cds;Parent=Msa0022160-mRNA-1 |
chr1_1 | CDS | 41249717 | 41249933 | 41249717 | ID=Msa0022160-mRNA-1:cds;Parent=Msa0022160-mRNA-1 |
chr1_1 | CDS | 41249279 | 41249395 | 41249279 | ID=Msa0022160-mRNA-1:cds;Parent=Msa0022160-mRNA-1 |
chr1_1 | CDS | 41248327 | 41248378 | 41248327 | ID=Msa0022160-mRNA-1:cds;Parent=Msa0022160-mRNA-1 |
chr1_1 | CDS | 41248147 | 41248216 | 41248147 | ID=Msa0022160-mRNA-1:cds;Parent=Msa0022160-mRNA-1 |
chr1_1 | CDS | 41247195 | 41247353 | 41247195 | ID=Msa0022160-mRNA-1:cds;Parent=Msa0022160-mRNA-1 |
chr1_1 | CDS | 41246027 | 41246174 | 41246027 | ID=Msa0022160-mRNA-1:cds;Parent=Msa0022160-mRNA-1 |
chr1_1 | CDS | 41245567 | 41245737 | 41245567 | ID=Msa0022160-mRNA-1:cds;Parent=Msa0022160-mRNA-1 |
chr1_1 | CDS | 41244918 | 41244973 | 41244918 | ID=Msa0022160-mRNA-1:cds;Parent=Msa0022160-mRNA-1 |
Gene Sequence |
Protein sequence |