AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0024150

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0024150 MtrunA17_Chr7g0228401 49.799 498 146 5 1 397 1 495 3.70e-147 427
Msa0024150 MtrunA17_Chr1g0177901 90.566 212 16 1 191 402 4 211 6.35e-140 397
Msa0024150 MtrunA17_Chr7g0228481 50.682 440 152 10 1 399 1 416 1.38e-128 377
Msa0024150 MtrunA17_Chr7g0228531 50.909 440 151 10 1 399 1 416 4.56e-128 375
Msa0024150 MtrunA17_Chr7g0233161 44.981 269 108 4 4 232 82 350 2.47e-68 220
Msa0024150 MtrunA17_Chr7g0233061 37.831 415 175 12 1 389 1 358 1.24e-65 213
Msa0024150 MtrunA17_Chr4g0046181 44.118 272 112 5 1 232 1 272 1.40e-58 192
Msa0024150 MtrunA17_Chr7g0233151 55.556 171 59 5 231 399 1 156 8.70e-50 166
Msa0024150 MtrunA17_Chr3g0117511 60.606 132 51 1 174 305 176 306 1.10e-46 166
Msa0024150 MtrunA17_Chr4g0058991 56.061 132 57 1 174 305 202 332 1.70e-44 160
Msa0024150 MtrunA17_Chr5g0429661 48.485 165 74 5 181 336 122 284 1.76e-43 155
Msa0024150 MtrunA17_Chr7g0238631 60.825 97 38 0 181 277 113 209 1.19e-33 132
Msa0024150 MtrunA17_Chr1g0157731 53.846 104 47 1 181 283 91 194 1.27e-32 130
Msa0024150 MtrunA17_Chr3g0139671 53.846 104 47 1 181 283 85 188 7.22e-32 128
Msa0024150 MtrunA17_Chr4g0008551 53.535 99 46 0 181 279 38 136 7.79e-31 120
Msa0024150 MtrunA17_Chr5g0397841 54.808 104 45 1 174 275 101 204 8.68e-30 120
Msa0024150 MtrunA17_Chr5g0397841 33.333 99 62 2 180 274 54 152 3.50e-11 64.7
Msa0024150 MtrunA17_Chr2g0309911 49.000 100 50 1 179 277 11 110 1.04e-27 111
Msa0024150 MtrunA17_Chr3g0133601 50.000 96 48 0 181 276 37 132 3.18e-27 108
Msa0024150 MtrunA17_Chr4g0053431 52.083 96 46 0 181 276 5 100 5.97e-27 108
Msa0024150 MtrunA17_Chr5g0437321 50.515 97 48 0 181 277 19 115 1.22e-26 108
Msa0024150 MtrunA17_Chr5g0401731 48.571 105 54 0 172 276 6 110 1.76e-26 108
Msa0024150 MtrunA17_Chr5g0410961 44.762 105 57 1 176 279 9 113 2.70e-26 108
Msa0024150 MtrunA17_Chr4g0022911 39.355 155 84 4 175 323 9 159 4.66e-26 106
Msa0024150 MtrunA17_Chr4g0022901 40.769 130 74 2 175 301 9 138 4.85e-26 105
Msa0024150 MtrunA17_Chr8g0342541 46.078 102 54 1 179 279 12 113 7.30e-26 107
Msa0024150 MtrunA17_Chr2g0281071 45.794 107 57 1 174 279 8 114 7.48e-26 107
Msa0024150 MtrunA17_Chr4g0048511 44.860 107 58 1 174 279 8 114 1.04e-25 107
Msa0024150 MtrunA17_Chr5g0395281 46.078 102 54 1 176 276 9 110 1.17e-25 105
Msa0024150 MtrunA17_Chr4g0022931 46.154 104 55 1 175 277 9 112 1.57e-25 104
Msa0024150 MtrunA17_Chr4g0039971 46.078 102 54 1 176 276 10 111 2.35e-25 105
Msa0024150 MtrunA17_Chr1g0193371 37.931 145 77 4 179 320 12 146 2.61e-25 105
Msa0024150 MtrunA17_Chr3g0099131 46.535 101 53 1 177 276 39 139 3.48e-25 107
Msa0024150 MtrunA17_Chr2g0323411 45.714 105 56 1 176 279 9 113 3.75e-25 104
Msa0024150 MtrunA17_Chr3g0115821 46.078 102 54 1 176 276 9 110 4.76e-25 104
Msa0024150 MtrunA17_Chr2g0330041 46.078 102 54 1 179 279 12 113 5.03e-25 105
Msa0024150 MtrunA17_Chr8g0342521 45.098 102 55 1 179 279 12 113 6.91e-25 104
Msa0024150 MtrunA17_Chr4g0046171 46.429 140 58 4 262 399 1 125 9.77e-25 98.6
Msa0024150 MtrunA17_Chr2g0323351 42.857 119 64 2 179 296 12 127 1.38e-24 101
Msa0024150 MtrunA17_Chr3g0088461 45.714 105 56 1 176 279 19 123 1.62e-24 103
Msa0024150 MtrunA17_Chr7g0270891 32.338 201 121 6 179 374 12 202 1.75e-24 103
Msa0024150 MtrunA17_Chr1g0154031 48.485 99 50 1 179 276 76 174 2.62e-24 103
Msa0024150 MtrunA17_Chr5g0435101 45.714 105 56 1 176 279 8 112 2.76e-24 99.8
Msa0024150 MtrunA17_Chr4g0037141 37.681 138 74 3 175 309 8 136 3.23e-24 101
Msa0024150 MtrunA17_Chr6g0454921 47.059 102 54 0 174 275 8 109 3.70e-24 99.4
Msa0024150 MtrunA17_Chr5g0397231 43.810 105 55 2 173 276 9 110 4.04e-24 102
Msa0024150 MtrunA17_Chr1g0193801 44.000 100 55 1 179 277 12 111 5.21e-24 102
Msa0024150 MtrunA17_Chr8g0385321 44.660 103 55 2 181 281 14 116 5.36e-24 101
Msa0024150 MtrunA17_Chr7g0274581 42.149 121 68 2 179 297 12 132 6.57e-24 98.6
Msa0024150 MtrunA17_Chr8g0354661 41.129 124 68 3 157 276 13 135 7.92e-24 103
Msa0024150 MtrunA17_Chr1g0211161 44.000 100 55 1 179 277 13 112 8.08e-24 99.0
Msa0024150 MtrunA17_Chr4g0042501 48.936 94 48 0 181 274 105 198 8.29e-24 102
Msa0024150 MtrunA17_Chr5g0417621 47.000 100 53 0 175 274 128 227 9.69e-24 102
Msa0024150 MtrunA17_Chr8g0342481 45.631 103 54 2 179 279 12 114 9.93e-24 102
Msa0024150 MtrunA17_Chr2g0328771 40.870 115 63 2 179 288 20 134 1.13e-23 100
Msa0024150 MtrunA17_Chr1g0167661 44.444 108 57 2 179 283 12 119 1.22e-23 99.0
Msa0024150 MtrunA17_Chr4g0055981 41.964 112 62 2 179 287 55 166 1.37e-23 98.2
Msa0024150 MtrunA17_Chr7g0271241 44.898 98 53 1 179 275 12 109 1.42e-23 101
Msa0024150 MtrunA17_Chr8g0349261 45.000 100 53 2 179 276 13 112 1.78e-23 99.4
Msa0024150 MtrunA17_Chr6g0452271 41.905 105 60 1 176 279 9 113 1.82e-23 100
Msa0024150 MtrunA17_Chr3g0117091 40.541 111 65 1 170 279 3 113 1.94e-23 100
Msa0024150 MtrunA17_Chr3g0131121 45.631 103 54 2 181 281 14 116 2.13e-23 99.4
Msa0024150 MtrunA17_Chr4g0022891 40.741 108 63 1 179 285 12 119 2.15e-23 97.8
Msa0024150 MtrunA17_Chr8g0343831 44.444 99 54 1 179 276 8 106 2.82e-23 97.8
Msa0024150 MtrunA17_Chr8g0387421 42.857 105 56 2 173 276 9 110 3.54e-23 99.0
Msa0024150 MtrunA17_Chr4g0013361 36.646 161 86 5 179 330 10 163 3.61e-23 98.6
Msa0024150 MtrunA17_Chr8g0346561 45.455 99 53 1 179 276 12 110 4.65e-23 98.2
Msa0024150 MtrunA17_Chr6g0480581 47.368 95 50 0 181 275 4 98 4.91e-23 97.1
Msa0024150 MtrunA17_Chr4g0032401 38.028 142 81 2 179 313 17 158 5.14e-23 99.0
Msa0024150 MtrunA17_Chr3g0080861 44.444 99 54 1 179 276 37 135 5.32e-23 100
Msa0024150 MtrunA17_Chr4g0058631 43.137 102 57 1 179 279 12 113 5.44e-23 99.4
Msa0024150 MtrunA17_Chr7g0275911 44.444 99 54 1 179 276 12 110 7.78e-23 96.7
Msa0024150 MtrunA17_Chr4g0044421 46.078 102 50 2 181 279 14 113 1.10e-22 94.7
Msa0024150 MtrunA17_Chr5g0416341 42.500 120 65 2 159 276 4 121 1.16e-22 99.4
Msa0024150 MtrunA17_Chr7g0228231 42.718 103 58 1 175 276 10 112 1.40e-22 94.7
Msa0024150 MtrunA17_Chr1g0187761 38.793 116 69 2 179 292 12 127 1.65e-22 95.9
Msa0024150 MtrunA17_Chr1g0209661 34.066 182 107 5 174 344 22 201 1.81e-22 97.1
Msa0024150 MtrunA17_Chr6g0460661 43.878 98 55 0 181 278 16 113 1.94e-22 93.2
Msa0024150 MtrunA17_Chr3g0103281 42.718 103 58 1 175 276 8 110 2.09e-22 97.1
Msa0024150 MtrunA17_Chr7g0261281 43.434 99 55 1 179 276 12 110 2.77e-22 95.9
Msa0024150 MtrunA17_Chr6g0460671 37.681 138 83 1 140 274 55 192 3.58e-22 96.7
Msa0024150 MtrunA17_Chr4g0057031 42.424 99 56 1 179 276 12 110 5.01e-22 94.7
Msa0024150 MtrunA17_Chr4g0070641 44.444 99 54 1 179 276 12 110 5.02e-22 92.0
Msa0024150 MtrunA17_Chr1g0203411 43.434 99 55 1 179 276 12 110 5.15e-22 95.5
Msa0024150 MtrunA17_Chr1g0167691 42.424 99 56 1 179 276 12 110 5.94e-22 94.4
Msa0024150 MtrunA17_Chr4g0070611 44.444 99 54 1 179 276 12 110 6.93e-22 95.1
Msa0024150 MtrunA17_Chr6g0450101 41.748 103 59 1 175 276 10 112 7.88e-22 92.8
Msa0024150 MtrunA17_Chr5g0440781 42.056 107 60 2 177 281 10 116 9.26e-22 92.0
Msa0024150 MtrunA17_Chr1g0194291 39.823 113 67 1 165 276 7 119 1.03e-21 94.0
Msa0024150 MtrunA17_Chr1g0186061 40.777 103 60 1 175 276 16 118 1.47e-21 93.2
Msa0024150 MtrunA17_Chr5g0440761 42.056 107 60 2 177 281 10 116 1.60e-21 93.2
Msa0024150 MtrunA17_Chr5g0441141 42.056 107 60 2 177 281 10 116 1.67e-21 93.6
Msa0024150 MtrunA17_Chr1g0180391 42.574 101 57 1 177 276 17 117 2.05e-21 92.0
Msa0024150 MtrunA17_Chr8g0362231 38.519 135 76 3 168 295 5 139 2.06e-21 95.5
Msa0024150 MtrunA17_Chr4g0022881 40.816 98 57 1 180 276 13 110 2.18e-21 92.0
Msa0024150 MtrunA17_Chr7g0254261 51.064 94 46 0 181 274 89 182 2.20e-21 94.7
Msa0024150 MtrunA17_Chr1g0168661 38.525 122 69 2 175 290 17 138 2.23e-21 92.8
Msa0024150 MtrunA17_Chr8g0334881 43.243 111 61 2 173 281 4 114 3.17e-21 93.6
Msa0024150 MtrunA17_Chr4g0042671 42.424 99 56 1 179 276 12 110 3.83e-21 94.4
Msa0024150 MtrunA17_Chr7g0228991 43.434 99 55 1 179 276 29 127 5.17e-21 92.0
Msa0024150 MtrunA17_Chr3g0110351 42.424 99 56 1 179 276 12 110 5.22e-21 92.8
Msa0024150 MtrunA17_Chr1g0151941 44.000 100 54 2 179 276 12 111 5.28e-21 91.7
Msa0024150 MtrunA17_Chr5g0434911 39.831 118 67 2 163 279 8 122 5.41e-21 92.0
Msa0024150 MtrunA17_Chr7g0240821 36.429 140 73 3 184 321 6 131 5.42e-21 90.9
Msa0024150 MtrunA17_Chr5g0434571 42.424 99 56 1 179 276 48 146 5.42e-21 93.6
Msa0024150 MtrunA17_Chr3g0125801 48.936 94 48 0 181 274 16 109 7.45e-21 92.0
Msa0024150 MtrunA17_Chr7g0217741 42.424 99 56 1 179 276 12 110 8.32e-21 92.0
Msa0024150 MtrunA17_Chr5g0434931 42.157 102 58 1 179 279 35 136 8.43e-21 91.7
Msa0024150 MtrunA17_Chr5g0434841 41.026 117 63 2 164 279 10 121 9.03e-21 92.0
Msa0024150 MtrunA17_Chr4g0030881 40.000 115 61 1 180 286 8 122 2.05e-20 90.1
Msa0024150 MtrunA17_Chr7g0220341 42.574 101 55 1 179 276 25 125 2.38e-20 90.1
Msa0024150 MtrunA17_Chr7g0217221 42.424 99 56 1 179 276 12 110 2.73e-20 90.1
Msa0024150 MtrunA17_Chr3g0104491 49.398 83 38 1 231 309 17 99 3.08e-20 90.1
Msa0024150 MtrunA17_Chr2g0311221 41.584 101 58 1 177 276 12 112 3.31e-20 90.9
Msa0024150 MtrunA17_Chr6g0453471 42.424 99 56 1 179 276 12 110 3.47e-20 91.3
Msa0024150 MtrunA17_Chr4g0068061 41.176 102 59 1 179 279 12 113 4.08e-20 90.5
Msa0024150 MtrunA17_Chr2g0327351 37.815 119 72 2 176 292 9 127 4.64e-20 90.1
Msa0024150 MtrunA17_Chr5g0417821 42.857 98 55 1 179 275 7 104 5.39e-20 89.4
Msa0024150 MtrunA17_Chr5g0441131 41.346 104 59 2 178 279 8 111 5.89e-20 87.0
Msa0024150 MtrunA17_Chr5g0434831 41.121 107 62 1 174 279 2 108 6.76e-20 87.0
Msa0024150 MtrunA17_Chr7g0247131 50.685 73 34 1 206 276 4 76 1.09e-19 88.2
Msa0024150 MtrunA17_Chr1g0192411 42.157 102 58 1 179 279 12 113 1.09e-19 90.1
Msa0024150 MtrunA17_Chr5g0400821 41.748 103 58 2 176 276 9 111 1.27e-19 88.6
Msa0024150 MtrunA17_Chr4g0060721 40.566 106 61 2 179 282 13 118 1.54e-19 89.0
Msa0024150 MtrunA17_Chr2g0327821 39.286 112 67 1 176 286 3 114 1.64e-19 87.0
Msa0024150 MtrunA17_Chr3g0121241 35.714 112 69 2 179 287 42 153 1.70e-19 88.2
Msa0024150 MtrunA17_Chr7g0228891 40.404 99 58 1 179 276 12 110 1.86e-19 87.4
Msa0024150 MtrunA17_Chr2g0322521 49.505 101 50 1 177 276 27 127 2.34e-19 89.4
Msa0024150 MtrunA17_Chr6g0453211 40.404 99 58 1 179 276 12 110 2.68e-19 87.8
Msa0024150 MtrunA17_Chr1g0194301 38.384 99 60 1 179 276 33 131 2.68e-19 87.4
Msa0024150 MtrunA17_Chr4g0028311 31.953 169 103 5 176 332 9 177 2.72e-19 88.2
Msa0024150 MtrunA17_Chr3g0099141 45.882 85 45 1 176 259 37 121 3.00e-19 83.6
Msa0024150 MtrunA17_Chr1g0203441 41.837 98 56 1 180 276 14 111 3.56e-19 86.7
Msa0024150 MtrunA17_Chr6g0470971 40.777 103 60 1 175 276 10 112 4.35e-19 86.7
Msa0024150 MtrunA17_Chr3g0092401 40.196 102 60 1 179 279 13 114 4.93e-19 87.0
Msa0024150 MtrunA17_Chr7g0254411 42.453 106 59 2 179 282 12 117 5.27e-19 87.4
Msa0024150 MtrunA17_Chr4g0072751 40.777 103 59 2 176 276 9 111 5.45e-19 87.4
Msa0024150 MtrunA17_Chr4g0054391 41.176 102 58 2 176 275 9 110 5.72e-19 86.7
Msa0024150 MtrunA17_Chr1g0152011 39.806 103 60 2 176 276 9 111 7.82e-19 87.0
Msa0024150 MtrunA17_Chr1g0194951 41.414 99 57 1 179 276 12 110 9.63e-19 87.0
Msa0024150 MtrunA17_Chr8g0360111 40.404 99 58 1 179 276 25 123 1.50e-18 84.7
Msa0024150 MtrunA17_Chr3g0135311 40.777 103 59 2 176 276 9 111 2.41e-18 85.5
Msa0024150 MtrunA17_Chr7g0264641 39.806 103 60 2 176 276 9 111 6.12e-18 83.2
Msa0024150 MtrunA17_Chr3g0104501 67.308 52 17 0 181 232 133 184 1.94e-17 80.1
Msa0024150 MtrunA17_Chr2g0293911 40.196 102 60 1 176 276 21 122 4.56e-17 81.6
Msa0024150 MtrunA17_Chr6g0487491 37.838 111 59 3 176 276 9 119 1.02e-16 79.7
Msa0024150 MtrunA17_Chr2g0323321 38.554 83 50 1 177 258 9 91 1.59e-16 75.1
Msa0024150 MtrunA17_Chr4g0068921 38.318 107 65 1 176 281 21 127 2.91e-16 76.6
Msa0024150 MtrunA17_Chr5g0434901 50.000 66 33 0 214 279 9 74 3.34e-16 74.3
Msa0024150 MtrunA17_Chr5g0421201 46.392 97 44 3 233 326 12 103 3.88e-16 76.3
Msa0024150 MtrunA17_Chr7g0269831 44.444 99 54 1 179 276 12 110 1.24e-15 77.8
Msa0024150 MtrunA17_Chr8g0342511 39.241 79 47 1 176 253 9 87 5.86e-15 70.1
Msa0024150 MtrunA17_Chr8g0342531 38.272 81 49 1 176 255 9 89 7.12e-15 72.0
Msa0024150 MtrunA17_Chr7g0229101 46.970 66 35 0 214 279 8 73 2.36e-14 71.6
Msa0024150 MtrunA17_Chr8g0342461 43.038 79 43 2 179 255 12 90 2.98e-14 69.7
Msa0024150 MtrunA17_Chr7g0238651 37.113 97 58 1 181 274 7 103 3.27e-14 73.6
Msa0024150 MtrunA17_Chr8g0342471 43.038 79 43 2 179 255 12 90 4.04e-14 69.3
Msa0024150 MtrunA17_Chr4g0042611 40.260 77 45 1 179 254 12 88 6.34e-14 67.0
Msa0024150 MtrunA17_Chr5g0395221 38.750 80 48 1 176 254 9 88 5.43e-13 64.3
Msa0024150 MtrunA17_Chr2g0294811 37.662 77 47 1 179 254 12 88 5.48e-13 65.5
Msa0024150 MtrunA17_Chr5g0425591 39.286 84 49 2 178 259 8 91 7.64e-13 64.3
Msa0024150 MtrunA17_Chr7g0229131 43.939 66 37 0 214 279 8 73 1.79e-12 65.5
Msa0024150 MtrunA17_Chr3g0093811 36.709 79 46 2 202 276 2 80 8.37e-12 65.1
Msa0024150 MtrunA17_Chr7g0274481 35.417 96 61 1 179 274 5 99 1.09e-11 67.0
Msa0024150 MtrunA17_Chr6g0483051 31.959 97 65 1 178 274 66 161 2.84e-11 65.5
Msa0024150 MtrunA17_Chr5g0397691 34.737 95 59 1 180 274 6 97 2.94e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0024150 AT4G18770.1 58.647 133 54 1 173 305 209 340 1.18e-47 168
Msa0024150 AT5G40360.1 46.117 206 86 5 120 306 85 284 2.20e-47 166
Msa0024150 AT3G27785.1 54.676 139 60 1 175 310 183 321 6.69e-46 164
Msa0024150 AT5G11050.1 55.147 136 61 0 154 289 78 213 8.46e-44 158
Msa0024150 AT5G58850.1 44.186 172 83 2 178 336 102 273 5.98e-42 153
Msa0024150 AT2G25230.1 47.368 152 78 2 175 325 20 170 7.48e-38 137
Msa0024150 AT5G40430.1 41.566 166 83 4 155 310 20 181 2.35e-33 125
Msa0024150 AT5G11510.3 53.846 104 47 1 181 283 81 184 5.62e-33 131
Msa0024150 AT5G11510.1 53.846 104 47 1 181 283 81 184 5.62e-33 131
Msa0024150 AT5G11510.4 53.846 104 47 1 181 283 81 184 5.62e-33 131
Msa0024150 AT5G11510.5 53.846 104 47 1 181 283 81 184 6.40e-33 131
Msa0024150 AT5G11510.2 53.846 104 47 1 181 283 81 184 6.45e-33 131
Msa0024150 AT5G02320.1 56.701 97 42 0 181 277 127 223 1.89e-31 125
Msa0024150 AT5G02320.2 56.701 97 42 0 181 277 127 223 1.89e-31 125
Msa0024150 AT3G09370.1 57.732 97 41 0 181 277 130 226 1.93e-31 125
Msa0024150 AT3G09370.2 57.732 97 41 0 181 277 135 231 1.95e-31 125
Msa0024150 AT5G02320.3 56.701 97 42 0 181 277 67 163 2.00e-31 125
Msa0024150 AT3G09370.3 56.000 100 44 0 178 277 140 239 2.65e-31 125
Msa0024150 AT4G32730.5 50.943 106 51 1 179 283 85 190 2.00e-30 124
Msa0024150 AT4G32730.4 50.943 106 51 1 179 283 85 190 2.00e-30 124
Msa0024150 AT4G32730.3 50.943 106 51 1 179 283 85 190 2.00e-30 124
Msa0024150 AT4G32730.2 50.943 106 51 1 179 283 85 190 2.00e-30 124
Msa0024150 AT4G32730.1 50.943 106 51 1 179 283 85 190 2.28e-30 124
Msa0024150 AT3G55730.1 53.535 99 46 0 181 279 56 154 1.19e-28 116
Msa0024150 AT3G09230.1 53.535 99 46 0 181 279 55 153 3.43e-28 114
Msa0024150 AT4G00540.2 53.398 103 45 2 178 277 100 202 9.51e-28 114
Msa0024150 AT4G00540.2 34.951 103 58 2 181 274 46 148 9.56e-11 63.5
Msa0024150 AT3G11440.2 47.573 103 53 1 175 276 37 139 1.56e-27 114
Msa0024150 AT3G28470.1 46.078 102 54 1 176 276 9 110 1.69e-27 111
Msa0024150 AT3G12720.1 41.606 137 74 3 161 291 1 137 1.96e-27 110
Msa0024150 AT4G00540.1 50.450 111 52 2 170 277 90 200 2.15e-27 113
Msa0024150 AT3G11440.3 47.573 103 53 1 175 276 37 139 4.02e-27 113
Msa0024150 AT3G11440.4 47.573 103 53 1 175 276 37 139 4.02e-27 113
Msa0024150 AT3G11440.1 47.573 103 53 1 175 276 37 139 4.02e-27 113
Msa0024150 AT4G05100.1 45.794 107 57 1 174 279 8 114 2.67e-26 108
Msa0024150 AT3G53200.1 41.259 143 76 4 174 309 4 145 3.74e-26 105
Msa0024150 AT1G57560.2 35.028 177 90 4 179 349 12 169 4.39e-26 106
Msa0024150 AT3G13890.2 46.078 102 54 1 179 279 12 113 1.99e-25 106
Msa0024150 AT4G28110.1 46.078 102 54 1 179 279 12 113 2.77e-25 104
Msa0024150 AT3G13890.1 43.243 111 53 1 179 279 12 122 5.24e-25 105
Msa0024150 AT2G26960.1 44.444 108 59 1 181 287 22 129 6.02e-25 106
Msa0024150 AT1G09540.1 40.559 143 76 4 179 320 12 146 8.04e-25 104
Msa0024150 AT1G57560.1 45.000 100 54 1 179 277 12 111 8.17e-25 103
Msa0024150 AT5G55020.1 45.192 104 56 1 179 281 26 129 9.50e-25 106
Msa0024150 AT4G21440.1 47.059 102 53 1 179 279 12 113 1.01e-24 104
Msa0024150 AT5G52600.1 42.857 119 62 2 173 290 6 119 1.55e-24 100
Msa0024150 AT3G61250.1 44.000 100 55 1 178 276 11 110 1.66e-24 102
Msa0024150 AT4G37260.1 48.958 96 49 0 181 276 13 108 1.77e-24 103
Msa0024150 AT1G69560.1 46.000 100 54 0 176 275 102 201 1.77e-24 103
Msa0024150 AT1G69560.2 46.000 100 54 0 176 275 118 217 1.83e-24 103
Msa0024150 AT1G22640.1 39.098 133 69 3 175 304 8 131 2.19e-24 101
Msa0024150 AT2G39880.1 43.220 118 60 2 181 298 50 160 2.44e-24 103
Msa0024150 AT5G06100.1 44.444 99 54 1 179 276 32 130 2.65e-24 104
Msa0024150 AT4G01680.3 38.406 138 77 3 179 315 12 142 2.67e-24 100
Msa0024150 AT4G01680.1 38.406 138 77 3 179 315 12 142 2.87e-24 102
Msa0024150 AT5G26660.1 45.000 100 54 1 179 277 12 111 3.22e-24 102
Msa0024150 AT5G16770.4 43.810 105 58 1 176 279 9 113 4.47e-24 102
Msa0024150 AT5G16770.3 43.810 105 58 1 176 279 9 113 4.47e-24 102
Msa0024150 AT4G38620.1 36.601 153 83 4 181 328 14 157 4.53e-24 101
Msa0024150 AT5G10280.1 44.118 102 56 1 176 276 9 110 4.74e-24 102
Msa0024150 AT5G16770.1 43.810 105 58 1 176 279 9 113 4.98e-24 102
Msa0024150 AT5G16770.2 43.810 105 58 1 176 279 9 113 4.98e-24 102
Msa0024150 AT5G06100.5 44.444 99 54 1 179 276 32 130 5.28e-24 104
Msa0024150 AT5G06100.2 44.444 99 54 1 179 276 32 130 5.28e-24 104
Msa0024150 AT5G06100.3 44.444 99 54 1 179 276 32 130 5.28e-24 104
Msa0024150 AT5G06100.4 44.444 99 54 1 179 276 32 130 5.28e-24 104
Msa0024150 AT3G08500.1 46.078 102 54 1 179 279 30 131 5.57e-24 102
Msa0024150 AT5G14750.1 45.918 98 52 1 180 276 17 114 6.35e-24 99.0
Msa0024150 AT2G23290.1 47.573 103 54 0 174 276 6 108 6.84e-24 101
Msa0024150 AT2G32460.1 46.465 99 52 1 179 276 18 116 7.36e-24 103
Msa0024150 AT2G32460.2 46.465 99 52 1 179 276 6 104 7.80e-24 103
Msa0024150 AT5G65230.1 41.667 108 62 1 170 276 3 110 8.99e-24 100
Msa0024150 AT5G40330.1 43.689 103 57 1 175 276 8 110 1.02e-23 98.6
Msa0024150 AT2G47190.1 31.169 154 104 2 164 315 5 158 1.54e-23 99.4
Msa0024150 AT4G26930.1 45.455 99 53 1 179 276 19 117 1.55e-23 101
Msa0024150 AT1G26780.1 48.421 95 49 0 181 275 98 192 1.75e-23 99.4
Msa0024150 AT5G12870.1 41.525 118 67 2 161 277 1 117 1.81e-23 99.4
Msa0024150 AT3G50060.1 47.917 96 50 0 181 276 6 101 1.83e-23 99.8
Msa0024150 AT4G33450.1 46.939 98 52 0 175 272 13 110 1.92e-23 98.6
Msa0024150 AT4G17785.1 39.623 106 63 1 175 279 9 114 1.98e-23 100
Msa0024150 AT1G63910.1 44.762 105 54 2 173 276 9 110 1.99e-23 100
Msa0024150 AT4G01680.2 36.000 150 76 3 179 315 12 154 2.17e-23 100
Msa0024150 AT4G17785.2 39.623 106 63 1 175 279 9 114 2.23e-23 100
Msa0024150 AT1G26780.2 48.421 95 49 0 181 275 98 192 3.14e-23 100
Msa0024150 AT1G17950.1 37.580 157 93 3 181 334 5 159 3.16e-23 98.2
Msa0024150 AT4G09460.1 44.037 109 59 2 175 281 8 116 3.67e-23 97.4
Msa0024150 AT5G60890.1 47.573 103 53 1 175 276 8 110 4.39e-23 98.6
Msa0024150 AT3G23250.1 41.803 122 67 3 179 296 12 133 4.59e-23 98.6
Msa0024150 AT3G02940.2 43.810 105 58 1 176 279 9 113 4.99e-23 99.0
Msa0024150 AT3G02940.1 43.810 105 58 1 176 279 9 113 6.66e-23 98.6
Msa0024150 AT3G02940.3 43.810 105 58 1 176 279 9 113 6.66e-23 98.6
Msa0024150 AT3G01530.1 42.857 105 59 1 173 276 19 123 6.82e-23 95.9
Msa0024150 AT3G29020.1 47.368 95 50 0 181 275 65 159 7.07e-23 96.7
Msa0024150 AT3G29020.2 47.368 95 50 0 181 275 67 161 9.83e-23 97.8
Msa0024150 AT3G27810.1 44.118 102 56 1 176 276 17 118 1.00e-22 96.3
Msa0024150 AT5G56110.1 44.660 103 56 1 175 276 8 110 1.06e-22 98.2
Msa0024150 AT4G12350.1 42.424 99 56 1 179 276 12 110 1.11e-22 97.4
Msa0024150 AT3G27920.1 40.741 108 63 1 170 276 5 112 1.12e-22 95.9
Msa0024150 AT1G34670.1 43.137 102 57 1 176 276 9 110 1.29e-22 98.6
Msa0024150 AT5G67300.1 48.958 96 49 0 181 276 6 101 1.47e-22 97.4
Msa0024150 AT4G34990.1 37.241 145 83 3 181 324 14 151 1.91e-22 96.7
Msa0024150 AT2G02820.2 46.237 93 50 0 184 276 33 125 3.09e-22 99.0
Msa0024150 AT2G02820.1 44.954 109 57 2 184 289 33 141 3.33e-22 98.6
Msa0024150 AT2G02820.3 44.954 109 57 2 184 289 33 141 3.53e-22 97.1
Msa0024150 AT1G18570.1 44.231 104 57 1 174 276 8 111 3.80e-22 97.1
Msa0024150 AT4G22680.1 43.434 99 55 1 179 276 12 110 3.94e-22 95.5
Msa0024150 AT1G74430.1 41.284 109 63 1 178 285 11 119 4.91e-22 95.1
Msa0024150 AT2G16720.1 44.660 103 55 2 181 281 14 116 6.12e-22 95.1
Msa0024150 AT1G35515.1 40.367 109 63 2 175 281 8 116 6.33e-22 93.6
Msa0024150 AT5G57620.1 42.149 121 66 3 176 292 9 129 6.84e-22 95.9
Msa0024150 AT3G30210.1 41.739 115 66 1 163 276 11 125 7.65e-22 94.7
Msa0024150 AT5G54230.1 44.444 99 54 1 179 276 12 110 8.29e-22 95.5
Msa0024150 AT5G40350.1 42.157 102 58 1 176 276 14 115 1.59e-21 92.4
Msa0024150 AT5G62320.1 43.478 115 56 3 176 281 10 124 1.89e-21 93.2
Msa0024150 AT1G06180.1 38.596 114 68 2 179 290 12 125 1.91e-21 93.2
Msa0024150 AT1G16490.1 41.584 101 58 1 177 276 12 112 1.96e-21 93.6
Msa0024150 AT3G60460.1 42.982 114 63 2 170 281 2 115 2.01e-21 94.0
Msa0024150 AT5G17800.1 46.809 94 50 0 181 274 93 186 2.85e-21 94.0
Msa0024150 AT1G56160.1 41.414 99 57 1 179 276 14 112 3.82e-21 93.2
Msa0024150 AT1G14350.2 44.086 93 52 0 184 276 28 120 4.63e-21 95.1
Msa0024150 AT1G14350.1 44.086 93 52 0 184 276 28 120 4.63e-21 95.1
Msa0024150 AT3G46130.1 41.026 117 67 2 171 286 2 117 5.50e-21 92.0
Msa0024150 AT3G13540.1 36.441 118 74 1 163 279 7 124 5.89e-21 91.7
Msa0024150 AT3G24310.1 41.176 102 59 1 176 276 15 116 6.07e-21 92.0
Msa0024150 AT2G31180.1 41.414 99 57 1 179 276 12 110 6.37e-21 91.7
Msa0024150 AT5G35550.1 40.336 119 67 2 175 289 10 128 8.56e-21 91.7
Msa0024150 AT5G59780.3 40.741 108 63 1 180 286 9 116 1.51e-20 90.1
Msa0024150 AT1G66230.1 42.000 100 55 2 179 276 12 110 2.03e-20 90.9
Msa0024150 AT3G48920.1 42.373 118 64 3 161 276 1 116 2.08e-20 90.5
Msa0024150 AT5G62470.1 40.816 98 58 0 179 276 12 109 2.17e-20 92.0
Msa0024150 AT5G65790.1 41.739 115 63 3 176 286 9 123 2.22e-20 92.4
Msa0024150 AT1G25340.1 33.333 153 88 4 180 322 19 167 2.96e-20 90.5
Msa0024150 AT1G25340.2 33.553 152 84 4 180 322 19 162 3.04e-20 90.5
Msa0024150 AT1G68320.1 39.394 99 59 1 179 276 19 117 3.16e-20 90.5
Msa0024150 AT1G74080.1 40.777 103 60 1 175 276 8 110 3.60e-20 91.3
Msa0024150 AT5G07690.1 43.269 104 58 1 179 281 12 115 3.66e-20 91.3
Msa0024150 AT4G13480.1 41.837 98 56 1 180 276 7 104 3.71e-20 89.7
Msa0024150 AT5G07700.1 45.455 99 53 1 179 276 12 110 5.36e-20 90.9
Msa0024150 AT5G07700.2 45.455 99 53 1 179 276 12 110 5.36e-20 90.9
Msa0024150 AT1G25340.3 33.553 152 84 4 180 322 19 162 6.99e-20 89.7
Msa0024150 AT3G53200.2 44.554 101 51 2 214 309 12 112 8.63e-20 87.4
Msa0024150 AT5G15310.4 40.404 99 58 1 179 276 12 110 1.04e-19 88.2
Msa0024150 AT5G49330.1 41.414 99 57 1 179 276 12 110 1.14e-19 89.7
Msa0024150 AT3G01140.2 35.000 140 79 3 176 312 9 139 1.16e-19 89.7
Msa0024150 AT1G48000.1 42.424 99 56 1 179 276 32 130 1.50e-19 87.8
Msa0024150 AT3G49690.1 40.000 115 65 3 176 286 9 123 1.68e-19 89.0
Msa0024150 AT5G15310.1 40.404 99 58 1 179 276 12 110 1.72e-19 89.0
Msa0024150 AT3G01140.1 35.000 140 79 3 176 312 52 182 1.75e-19 89.7
Msa0024150 AT2G47460.1 39.286 112 65 2 179 287 12 123 1.99e-19 89.4
Msa0024150 AT5G15310.2 40.404 99 58 1 179 276 12 110 2.02e-19 88.6
Msa0024150 AT5G61420.2 43.434 99 55 1 179 276 12 110 2.21e-19 89.4
Msa0024150 AT1G73410.2 44.444 108 59 1 181 287 6 113 2.27e-19 86.3
Msa0024150 AT3G47600.1 40.404 99 58 1 179 276 12 110 2.50e-19 88.6
Msa0024150 AT1G73410.1 44.444 108 59 1 181 287 6 113 2.50e-19 87.0
Msa0024150 AT1G79180.1 39.806 103 59 2 176 276 11 112 3.84e-19 87.4
Msa0024150 AT1G66370.1 41.414 99 57 1 179 276 8 106 3.95e-19 86.7
Msa0024150 AT5G16600.1 43.000 100 54 2 179 276 12 110 5.00e-19 87.8
Msa0024150 AT4G37780.1 39.000 100 59 2 179 276 12 111 5.23e-19 87.4
Msa0024150 AT5G26660.2 51.515 66 32 0 214 279 17 82 6.02e-19 87.4
Msa0024150 AT1G74650.1 41.414 99 57 1 179 276 12 110 6.04e-19 87.4
Msa0024150 AT1G08810.1 40.517 116 67 2 179 292 12 127 6.57e-19 86.7
Msa0024150 AT5G62470.2 40.404 99 58 1 179 276 12 110 6.86e-19 87.8
Msa0024150 AT5G23000.1 40.566 106 61 2 176 279 9 114 6.95e-19 87.4
Msa0024150 AT3G62610.1 41.414 99 57 1 179 276 12 110 9.47e-19 87.0
Msa0024150 AT5G39700.1 38.938 113 65 1 164 276 43 151 1.33e-18 83.6
Msa0024150 AT3G28910.1 39.450 109 64 2 176 282 9 117 1.47e-18 86.3
Msa0024150 AT3G12820.1 38.235 102 62 1 176 276 11 112 2.34e-18 84.3
Msa0024150 AT4G25560.1 42.857 98 55 1 180 276 11 108 4.02e-18 84.3
Msa0024150 AT5G14750.3 50.794 63 31 0 214 276 18 80 4.21e-18 81.6
Msa0024150 AT2G26950.1 34.821 112 64 2 181 287 18 125 4.41e-18 85.5
Msa0024150 AT5G14340.1 37.391 115 69 3 164 276 9 122 6.94e-18 83.6
Msa0024150 AT1G18710.1 37.000 100 62 1 179 277 12 111 9.04e-18 83.2
Msa0024150 AT2G36890.1 38.261 115 68 3 176 287 9 123 1.61e-17 82.8
Msa0024150 AT2G36890.2 37.302 126 72 4 169 287 39 164 1.78e-17 83.6
Msa0024150 AT5G35550.2 48.101 79 38 1 214 289 53 131 1.85e-17 82.0
Msa0024150 AT5G52260.1 43.878 98 54 1 180 276 13 110 2.78e-17 81.6
Msa0024150 AT5G49620.1 36.885 122 73 2 159 276 3 124 7.93e-17 80.9
Msa0024150 AT1G66380.1 43.434 99 55 1 179 276 8 106 2.01e-16 76.3
Msa0024150 AT1G56650.1 42.424 99 56 1 179 276 8 106 3.47e-16 78.2
Msa0024150 AT1G66390.1 44.444 99 54 1 179 276 8 106 4.19e-16 77.8
Msa0024150 AT3G27810.2 49.206 63 32 0 214 276 7 69 7.46e-16 75.5
Msa0024150 AT3G06490.1 37.255 102 63 1 174 274 14 115 1.63e-15 77.4
Msa0024150 AT3G18100.1 40.000 95 57 0 180 274 545 639 2.23e-15 78.6
Msa0024150 AT3G18100.1 35.714 98 61 2 178 274 492 588 4.36e-13 71.6
Msa0024150 AT1G79180.2 31.852 135 58 3 176 276 11 145 2.25e-15 77.0
Msa0024150 AT3G18100.3 40.000 95 57 0 180 274 497 591 2.29e-15 78.6
Msa0024150 AT3G18100.3 35.714 98 61 2 178 274 444 540 4.64e-13 71.6
Msa0024150 AT3G18100.4 40.000 95 57 0 180 274 384 478 2.43e-15 78.6
Msa0024150 AT3G18100.4 35.714 98 61 2 178 274 331 427 5.42e-13 71.2
Msa0024150 AT3G18100.2 40.000 95 57 0 180 274 332 426 3.24e-15 77.8
Msa0024150 AT3G18100.2 35.714 98 61 2 178 274 279 375 6.94e-13 70.9
Msa0024150 AT5G40350.2 47.619 63 33 0 214 276 8 70 4.45e-15 73.2
Msa0024150 AT3G12820.2 47.619 63 33 0 214 276 2 64 1.43e-14 72.4
Msa0024150 AT5G59780.2 42.466 73 42 0 214 286 23 95 2.06e-14 72.4
Msa0024150 AT3G46130.3 42.466 73 42 0 214 286 13 85 5.27e-14 71.2
Msa0024150 AT3G46130.4 42.466 73 42 0 214 286 23 95 5.44e-14 71.6
Msa0024150 AT1G22640.3 42.683 82 36 2 225 304 2 74 1.49e-13 69.7
Msa0024150 AT3G47600.2 44.444 63 35 0 214 276 42 104 1.64e-13 71.6
Msa0024150 AT5G49620.2 33.088 136 73 3 159 276 3 138 1.71e-13 71.2
Msa0024150 AT2G37630.1 37.895 95 56 1 183 274 6 100 7.62e-13 69.7
Msa0024150 AT1G71030.2 42.424 66 37 1 217 281 5 70 1.87e-12 65.9
Msa0024150 AT1G71030.1 42.424 66 37 1 217 281 19 84 2.42e-12 65.9
Msa0024150 AT5G14750.4 48.077 52 27 0 225 276 2 53 2.76e-12 64.3
Msa0024150 AT5G14750.2 48.077 52 27 0 225 276 2 53 2.76e-12 64.3
Msa0024150 AT3G23250.2 42.667 75 40 2 225 296 2 76 1.03e-11 64.7
Msa0024150 AT1G14350.3 49.091 55 28 0 222 276 23 77 1.43e-11 66.2
Msa0024150 AT1G14350.4 49.091 55 28 0 222 276 23 77 1.43e-11 66.2
Msa0024150 AT1G66380.3 50.794 63 31 0 214 276 11 73 1.55e-11 61.2
Msa0024150 AT1G09770.1 35.417 96 61 1 179 274 5 99 2.26e-11 66.2

Find 98 sgRNAs with CRISPR-Local

Find 207 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTTATATTGATTGGATTTA+TGG 0.046891 1_1:-46316460 None:intergenic
GTCAAATTGTTGGACTATTC+TGG 0.098803 1_1:+46317083 Msa0024150:CDS
AATAGATAAGGAATTCTTTC+TGG 0.120943 1_1:-46316326 None:intergenic
CTACCACCATCACTAGTTTA+TGG 0.185898 1_1:+46316716 Msa0024150:CDS
TATAAGGAACATCCTCTTAA+TGG 0.211342 1_1:+46316476 Msa0024150:CDS
TTTCCTTGATCATGGTCTTC+TGG 0.267693 1_1:-46316746 None:intergenic
AGGGTTTGGTTCATTGAAAA+TGG 0.300005 1_1:-46316542 None:intergenic
ACTATTCTGGGTTTAATAAC+TGG 0.310513 1_1:+46317096 Msa0024150:CDS
ATAAGGAACATCCTCTTAAT+GGG 0.318157 1_1:+46316477 Msa0024150:CDS
CCATAAATCCAATCAATATA+AGG 0.327700 1_1:+46316460 Msa0024150:CDS
AGGATGTTCCTTATATTGAT+TGG 0.329151 1_1:-46316468 None:intergenic
TCAAATTGTTGGACTATTCT+GGG 0.330896 1_1:+46317084 Msa0024150:CDS
CAACGAAATCACTAATTCTA+AGG 0.335193 1_1:+46318802 Msa0024150:CDS
CCATCTTCGACCAGACATTA+AGG 0.352485 1_1:+46317181 Msa0024150:CDS
TAGGATTCTTGTCAAATTGT+TGG 0.357877 1_1:+46317073 Msa0024150:intron
GGAATTCTTTCTGGAAAACT+TGG 0.361080 1_1:-46316317 None:intergenic
CAGTCGTGTGCGAAAGGGTT+TGG 0.371106 1_1:-46316556 None:intergenic
GCTTCCATTTCGTTATAGTT+TGG 0.371231 1_1:-46316638 None:intergenic
TCGGCTTCTTTGTAGCGTTC+AGG 0.375758 1_1:-46318736 None:intergenic
GAAATTGCAAAGAGACTTCC+TGG 0.380134 1_1:+46318665 Msa0024150:CDS
GAGTGTGGTGTTAACTTTGA+AGG 0.386575 1_1:+46318938 Msa0024150:CDS
ATGCATGACCTCCTTCAATA+TGG 0.391518 1_1:+46316662 Msa0024150:CDS
GTTCATTGAAAATGGTTTGA+TGG 0.394706 1_1:-46316534 None:intergenic
TAGTTTGGTGTAAAAGTCAT+TGG 0.397035 1_1:-46316623 None:intergenic
CTTGATCATGGTCTTCTGGT+TGG 0.397795 1_1:-46316742 None:intergenic
AGAACCAGTGCGGGGATCTC+TGG 0.402224 1_1:-46316380 None:intergenic
TTCCAACTATTTCGTCGGTT+CGG 0.408898 1_1:-46318755 None:intergenic
ATCGAAGCTCACAAGATAGT+TGG 0.429234 1_1:+46318629 Msa0024150:CDS
TACACCAAACTATAACGAAA+TGG 0.433768 1_1:+46316634 Msa0024150:CDS
GATGGAATGGCAAGTGGCTC+TGG 0.433866 1_1:+46319019 Msa0024150:CDS
TGGTGTTAACTTTGAAGGTT+TGG 0.435659 1_1:+46318943 Msa0024150:CDS
GGTGAACCATCACACTTCTA+TGG 0.445255 1_1:+46316499 Msa0024150:CDS
GTGAAGTTTCACCATATTGA+AGG 0.446905 1_1:-46316673 None:intergenic
TGAGAATGTTTCCTTGATCA+TGG 0.451402 1_1:-46316754 None:intergenic
CAGATTGCTAAGTTTATGAA+TGG 0.462207 1_1:+46317122 Msa0024150:CDS
AAAAGAAGGTTCACAAAGAC+AGG 0.463694 1_1:+46316792 Msa0024150:CDS
AAAGAATCCAATATAAGAAA+AGG 0.468148 1_1:+46316827 Msa0024150:CDS
CACACGACTGCAAACATCAA+TGG 0.469527 1_1:+46316569 Msa0024150:CDS
TGACCAGATGCGACAAAAGA+AGG 0.489767 1_1:+46316778 Msa0024150:CDS
AGCCGAACCGACGAAATAGT+TGG 0.490424 1_1:+46318753 Msa0024150:CDS
TTCCTTTCCAACTATTTCGT+CGG 0.496359 1_1:-46318760 None:intergenic
GGCACAATGAGTCATGAGAT+TGG 0.496501 1_1:+46319040 Msa0024150:CDS
GTTACTTCAGTGGAAGAACT+TGG 0.499219 1_1:+46318965 Msa0024150:CDS
TGAGATTGGATCGTATCAAA+TGG 0.502967 1_1:+46319054 Msa0024150:CDS
TGATGGTTCACCCCATTAAG+AGG 0.503375 1_1:-46316488 None:intergenic
CTCAATGTTCATCATGTTGG+TGG 0.505860 1_1:-46318849 None:intergenic
GGAGTTCCAACGGTTCTTGA+CGG 0.518211 1_1:-46318702 None:intergenic
TCGAAGCTCACAAGATAGTT+GGG 0.518710 1_1:+46318630 Msa0024150:CDS
AGCGTTCAGGCTGCGCTTAG+CGG 0.519640 1_1:-46318723 None:intergenic
GAAAATGGTTTGATGGAGGA+AGG 0.521740 1_1:-46316527 None:intergenic
TGCGCTTAGCGGAGTTCCAA+CGG 0.521912 1_1:-46318712 None:intergenic
GGTTGCAAGAGAACCAGTGC+GGG 0.524586 1_1:-46316389 None:intergenic
CAATGGACTCGTGATGAGGA+TGG 0.526666 1_1:+46316851 Msa0024150:CDS
CATTGAAAATGGTTTGATGG+AGG 0.532229 1_1:-46316531 None:intergenic
ATCGAACATCACTAAGACTA+GGG 0.532865 1_1:-46318904 None:intergenic
ATGATGTTGAATGGTGATGA+TGG 0.534000 1_1:+46319001 Msa0024150:CDS
GCAGAAGCGGAAAACAGTGC+AGG 0.534925 1_1:+46317144 Msa0024150:CDS
CCTTAATGTCTGGTCGAAGA+TGG 0.543915 1_1:-46317181 None:intergenic
AACATCACTAAGACTAGGGT+TGG 0.545875 1_1:-46318900 None:intergenic
GAAAACAGTGCAGGGAGAGA+TGG 0.549730 1_1:+46317153 Msa0024150:CDS
CAACCAGAAGACCATGATCA+AGG 0.554133 1_1:+46316743 Msa0024150:CDS
CATCCTCATCACGAGTCCAT+TGG 0.555426 1_1:-46316850 None:intergenic
TGAAGGTTTGGTTACTTCAG+TGG 0.567178 1_1:+46318955 Msa0024150:CDS
CCAATATAAGAAAAGGCCAA+TGG 0.575615 1_1:+46316834 Msa0024150:CDS
ACGGAGTTCTCAGTACGTCC+AGG 0.575760 1_1:-46318683 None:intergenic
TATCGAACATCACTAAGACT+AGG 0.576654 1_1:-46318905 None:intergenic
ATACTCAATGTTCATCATGT+TGG 0.576712 1_1:-46318852 None:intergenic
TGTTTGCAGTCGTGTGCGAA+AGG 0.578052 1_1:-46316562 None:intergenic
GTTTGCAGTCGTGTGCGAAA+GGG 0.578161 1_1:-46316561 None:intergenic
AATGGACTCGTGATGAGGAT+GGG 0.581381 1_1:+46316852 Msa0024150:CDS
AACTAGTGATGGTGGTAGAG+AGG 0.582236 1_1:-46316711 None:intergenic
AAGTTTATGAATGGCAGAAG+CGG 0.586961 1_1:+46317131 Msa0024150:CDS
GAAAGAGTCATGGAGTGAAG+AGG 0.588469 1_1:+46318592 Msa0024150:intron
AATGTGACAATGATGTTGAA+TGG 0.588727 1_1:+46318992 Msa0024150:CDS
AAAACCAGAGATCCCCGCAC+TGG 0.593457 1_1:+46316376 Msa0024150:CDS
AGAACTCCGTCAAGAACCGT+TGG 0.593655 1_1:+46318696 Msa0024150:CDS
AACCGACGAAATAGTTGGAA+AGG 0.594213 1_1:+46318758 Msa0024150:CDS
CCTGCACCATCTAATTACAC+TGG 0.595572 1_1:+46316428 Msa0024150:CDS
TAATTCTAAGGATGTTCAGA+AGG 0.597329 1_1:+46318814 Msa0024150:CDS
CCAGTGTAATTAGATGGTGC+AGG 0.599274 1_1:-46316428 None:intergenic
TGGTTTCCATAAACTAGTGA+TGG 0.599953 1_1:-46316722 None:intergenic
GTTGAATGGTGATGATGGAA+TGG 0.601518 1_1:+46319006 Msa0024150:CDS
CAGAAGCGGAAAACAGTGCA+GGG 0.604822 1_1:+46317145 Msa0024150:CDS
TTTCCATAAACTAGTGATGG+TGG 0.621844 1_1:-46316719 None:intergenic
GAACTACCATAGAAGTGTGA+TGG 0.625518 1_1:-46316505 None:intergenic
AGGCCAATGGACTCGTGATG+AGG 0.625530 1_1:+46316847 Msa0024150:CDS
AAGTTTCACCATATTGAAGG+AGG 0.627242 1_1:-46316670 None:intergenic
ACTTCAGTGGAAGAACTTGG+TGG 0.628454 1_1:+46318968 Msa0024150:CDS
CGATATGAAATTTCAGAGTG+TGG 0.631414 1_1:+46318923 Msa0024150:CDS
TATTAATCTAGAAAGAGTCA+TGG 0.641211 1_1:+46318582 Msa0024150:intron
ATATTGAAGGAGGTCATGCA+TGG 0.642077 1_1:-46316660 None:intergenic
TAAGGAACATCCTCTTAATG+GGG 0.664050 1_1:+46316478 Msa0024150:CDS
TACTATAGATCACTAACATG+AGG 0.667637 1_1:-46319085 None:intergenic
GGTGATGATGGAATGGCAAG+TGG 0.670002 1_1:+46319013 Msa0024150:CDS
GCAGGTGTAAGAGTAGAACT+TGG 0.695950 1_1:-46316410 None:intergenic
AAAGAAGGTTCACAAAGACA+GGG 0.706074 1_1:+46316793 Msa0024150:CDS
TGGTTGCAAGAGAACCAGTG+CGG 0.712881 1_1:-46316390 None:intergenic
GTTGCAAGAGAACCAGTGCG+GGG 0.724060 1_1:-46316388 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATCATTTGTATTTTTTAAAA+AGG - chr1_1:46318128-46318147 None:intergenic 10.0%
!!! CTATTTTAGATAAAAAAAAA+AGG + chr1_1:46318411-46318430 Msa0024150:intron 10.0%
!! GAACACTTATTTATAAATAT+AGG - chr1_1:46317880-46317899 None:intergenic 15.0%
!!! GAACACTTTTTTTTTATAAA+TGG - chr1_1:46318010-46318029 None:intergenic 15.0%
!! AATTAACCAAAATAAGAAAT+CGG - chr1_1:46318287-46318306 None:intergenic 15.0%
!! AACATATATGATAATATGAA+AGG - chr1_1:46318359-46318378 None:intergenic 15.0%
!!! GGAAAATTTTCAAATAGATA+AGG - chr1_1:46316341-46316360 None:intergenic 20.0%
!! AAAGAATCCAATATAAGAAA+AGG + chr1_1:46316827-46316846 Msa0024150:CDS 20.0%
!!! CATTACTATAAAATGTTTTC+AGG + chr1_1:46316904-46316923 Msa0024150:intron 20.0%
!! AATCAAAAAATTAAGAATGC+TGG + chr1_1:46317304-46317323 Msa0024150:intron 20.0%
!!! TATGTATTTATGTGAGTTTT+AGG - chr1_1:46317494-46317513 None:intergenic 20.0%
!!! TTTGGTTAATTTTGAACAAA+TGG + chr1_1:46318296-46318315 Msa0024150:intron 20.0%
!! TAATCTAGACATATATTGTT+TGG + chr1_1:46318559-46318578 Msa0024150:intron 20.0%
! AATAGATAAGGAATTCTTTC+TGG - chr1_1:46316329-46316348 None:intergenic 25.0%
! AAAAAACCAGTGTAATTAGA+TGG - chr1_1:46316437-46316456 None:intergenic 25.0%
!! CCTTATATTGATTGGATTTA+TGG - chr1_1:46316463-46316482 None:intergenic 25.0%
! CCATAAATCCAATCAATATA+AGG + chr1_1:46316460-46316479 Msa0024150:CDS 25.0%
!!! TAAAATGTTTTCAGGTTCTT+AGG + chr1_1:46316912-46316931 Msa0024150:intron 25.0%
!!! AAAATGTTTTCAGGTTCTTA+GGG + chr1_1:46316913-46316932 Msa0024150:intron 25.0%
!!! GGATTTGTTATATACTCTAT+TGG + chr1_1:46316937-46316956 Msa0024150:intron 25.0%
!! TCTTTTTCTTCAATCCTTTT+AGG + chr1_1:46317206-46317225 Msa0024150:intron 25.0%
! ATTTGTACTTGCAAAAAGTA+CGG - chr1_1:46317657-46317676 None:intergenic 25.0%
! TTATGATACATGCTCTTAAA+TGG - chr1_1:46317941-46317960 None:intergenic 25.0%
! AAAATCACTGAAGATACTTA+TGG - chr1_1:46318212-46318231 None:intergenic 25.0%
!!! CTATTTGTTTTTGCAAATGA+GGG - chr1_1:46318454-46318473 None:intergenic 25.0%
!!! TCTATTTGTTTTTGCAAATG+AGG - chr1_1:46318455-46318474 None:intergenic 25.0%
! AGATTTCAATTTCACTAATC+TGG - chr1_1:46318514-46318533 None:intergenic 25.0%
! TATTAATCTAGAAAGAGTCA+TGG + chr1_1:46318582-46318601 Msa0024150:intron 25.0%
!! GGTTTTTCTAGAGGAATTTT+AGG - chr1_1:46316362-46316381 None:intergenic 30.0%
AGGATGTTCCTTATATTGAT+TGG - chr1_1:46316471-46316490 None:intergenic 30.0%
TATAAGGAACATCCTCTTAA+TGG + chr1_1:46316476-46316495 Msa0024150:CDS 30.0%
ATAAGGAACATCCTCTTAAT+GGG + chr1_1:46316477-46316496 Msa0024150:CDS 30.0%
GTTCATTGAAAATGGTTTGA+TGG - chr1_1:46316537-46316556 None:intergenic 30.0%
ATCGATGAAAAATTCTCTCT+GGG - chr1_1:46316597-46316616 None:intergenic 30.0%
!! TAGTTTGGTGTAAAAGTCAT+TGG - chr1_1:46316626-46316645 None:intergenic 30.0%
TACACCAAACTATAACGAAA+TGG + chr1_1:46316634-46316653 Msa0024150:CDS 30.0%
!! ACTCTATTGGTTCAATTTGA+TGG + chr1_1:46316950-46316969 Msa0024150:intron 30.0%
TAGGATTCTTGTCAAATTGT+TGG + chr1_1:46317073-46317092 Msa0024150:intron 30.0%
TCAAATTGTTGGACTATTCT+GGG + chr1_1:46317084-46317103 Msa0024150:CDS 30.0%
ACTATTCTGGGTTTAATAAC+TGG + chr1_1:46317096-46317115 Msa0024150:CDS 30.0%
CAGATTGCTAAGTTTATGAA+TGG + chr1_1:46317122-46317141 Msa0024150:CDS 30.0%
GTAAGAGATAAAAGCCTAAA+AGG - chr1_1:46317223-46317242 None:intergenic 30.0%
!!! GTATTTATGTGAGTTTTAGG+CGG - chr1_1:46317491-46317510 None:intergenic 30.0%
! ATAGATATGCCATTTATCAC+TGG + chr1_1:46318146-46318165 Msa0024150:intron 30.0%
! TTTTGTTCTCCAGTGATAAA+TGG - chr1_1:46318158-46318177 None:intergenic 30.0%
AGATACTTATGGATAAAGCA+TGG - chr1_1:46318201-46318220 None:intergenic 30.0%
!!! TCCTTACCGATTTCTTATTT+TGG + chr1_1:46318278-46318297 Msa0024150:intron 30.0%
ACCAAAATAAGAAATCGGTA+AGG - chr1_1:46318282-46318301 None:intergenic 30.0%
CAACGAAATCACTAATTCTA+AGG + chr1_1:46318802-46318821 Msa0024150:CDS 30.0%
! TAATTCTAAGGATGTTCAGA+AGG + chr1_1:46318814-46318833 Msa0024150:CDS 30.0%
!! ATCATGTTGGTGGAATTTTT+CGG - chr1_1:46318842-46318861 None:intergenic 30.0%
ATACTCAATGTTCATCATGT+TGG - chr1_1:46318855-46318874 None:intergenic 30.0%
AATGTGACAATGATGTTGAA+TGG + chr1_1:46318992-46319011 Msa0024150:CDS 30.0%
! GGAATTCTTTCTGGAAAACT+TGG - chr1_1:46316320-46316339 None:intergenic 35.0%
TAAGGAACATCCTCTTAATG+GGG + chr1_1:46316478-46316497 Msa0024150:CDS 35.0%
CATTGAAAATGGTTTGATGG+AGG - chr1_1:46316534-46316553 None:intergenic 35.0%
! AGGGTTTGGTTCATTGAAAA+TGG - chr1_1:46316545-46316564 None:intergenic 35.0%
GATCGATGAAAAATTCTCTC+TGG - chr1_1:46316598-46316617 None:intergenic 35.0%
GCTTCCATTTCGTTATAGTT+TGG - chr1_1:46316641-46316660 None:intergenic 35.0%
AAGTTTCACCATATTGAAGG+AGG - chr1_1:46316673-46316692 None:intergenic 35.0%
GTGAAGTTTCACCATATTGA+AGG - chr1_1:46316676-46316695 None:intergenic 35.0%
TTTCCATAAACTAGTGATGG+TGG - chr1_1:46316722-46316741 None:intergenic 35.0%
TGGTTTCCATAAACTAGTGA+TGG - chr1_1:46316725-46316744 None:intergenic 35.0%
TGAGAATGTTTCCTTGATCA+TGG - chr1_1:46316757-46316776 None:intergenic 35.0%
AAAAGAAGGTTCACAAAGAC+AGG + chr1_1:46316792-46316811 Msa0024150:CDS 35.0%
AAAGAAGGTTCACAAAGACA+GGG + chr1_1:46316793-46316812 Msa0024150:CDS 35.0%
!!! CCATTGGCCTTTTCTTATAT+TGG - chr1_1:46316837-46316856 None:intergenic 35.0%
CCAATATAAGAAAAGGCCAA+TGG + chr1_1:46316834-46316853 Msa0024150:CDS 35.0%
GTCAAATTGTTGGACTATTC+TGG + chr1_1:46317083-46317102 Msa0024150:CDS 35.0%
AAGTTTATGAATGGCAGAAG+CGG + chr1_1:46317131-46317150 Msa0024150:CDS 35.0%
GAAAAAGACACCTTAATGTC+TGG - chr1_1:46317194-46317213 None:intergenic 35.0%
ACATAAATACCCCTGTTACT+TGG + chr1_1:46317509-46317528 Msa0024150:intron 35.0%
TACTTGGTTTCCAAGTAACA+GGG - chr1_1:46317522-46317541 None:intergenic 35.0%
TTACTTGGTTTCCAAGTAAC+AGG - chr1_1:46317523-46317542 None:intergenic 35.0%
AGGCTATAAATACCACTCTT+GGG + chr1_1:46317563-46317582 Msa0024150:intron 35.0%
! ACTTGCAAAAAGTACGGTAA+GGG - chr1_1:46317651-46317670 None:intergenic 35.0%
! TACTTGCAAAAAGTACGGTA+AGG - chr1_1:46317652-46317671 None:intergenic 35.0%
GGATAAAGCATGGATACATA+TGG - chr1_1:46318191-46318210 None:intergenic 35.0%
! TGAAAGGAGAAGCGTAAAAA+CGG - chr1_1:46318343-46318362 None:intergenic 35.0%
TTCCTTTCCAACTATTTCGT+CGG - chr1_1:46318763-46318782 None:intergenic 35.0%
ATCGAACATCACTAAGACTA+GGG - chr1_1:46318907-46318926 None:intergenic 35.0%
TATCGAACATCACTAAGACT+AGG - chr1_1:46318908-46318927 None:intergenic 35.0%
CGATATGAAATTTCAGAGTG+TGG + chr1_1:46318923-46318942 Msa0024150:CDS 35.0%
! TGGTGTTAACTTTGAAGGTT+TGG + chr1_1:46318943-46318962 Msa0024150:CDS 35.0%
! ATGATGTTGAATGGTGATGA+TGG + chr1_1:46319001-46319020 Msa0024150:CDS 35.0%
TGAGATTGGATCGTATCAAA+TGG + chr1_1:46319054-46319073 Msa0024150:CDS 35.0%
! GAACTACCATAGAAGTGTGA+TGG - chr1_1:46316508-46316527 None:intergenic 40.0%
GAAAATGGTTTGATGGAGGA+AGG - chr1_1:46316530-46316549 None:intergenic 40.0%
ATATTGAAGGAGGTCATGCA+TGG - chr1_1:46316663-46316682 None:intergenic 40.0%
ATGCATGACCTCCTTCAATA+TGG + chr1_1:46316662-46316681 Msa0024150:CDS 40.0%
! CTACCACCATCACTAGTTTA+TGG + chr1_1:46316716-46316735 Msa0024150:CDS 40.0%
TTTCCTTGATCATGGTCTTC+TGG - chr1_1:46316749-46316768 None:intergenic 40.0%
!!! ATGTTTTCAGGTTCTTAGGG+TGG + chr1_1:46316916-46316935 Msa0024150:intron 40.0%
TGGACCGTCATAATATTCCT+AGG + chr1_1:46317324-46317343 Msa0024150:intron 40.0%
GGACCGTCATAATATTCCTA+GGG + chr1_1:46317325-46317344 Msa0024150:intron 40.0%
GGACCCTAGGAATATTATGA+CGG - chr1_1:46317331-46317350 None:intergenic 40.0%
!!! AGTTTTAGGCGGTTTCTAGA+AGG - chr1_1:46317480-46317499 None:intergenic 40.0%
ACTTGGTTTCCAAGTAACAG+GGG - chr1_1:46317521-46317540 None:intergenic 40.0%
CAGGCTATAAATACCACTCT+TGG + chr1_1:46317562-46317581 Msa0024150:intron 40.0%
AAGTACGGTAAGGGATTCTA+GGG - chr1_1:46317642-46317661 None:intergenic 40.0%
AAAGTACGGTAAGGGATTCT+AGG - chr1_1:46317643-46317662 None:intergenic 40.0%
! GAAAGGAGAAGCGTAAAAAC+GGG - chr1_1:46318342-46318361 None:intergenic 40.0%
ATCGAAGCTCACAAGATAGT+TGG + chr1_1:46318629-46318648 Msa0024150:CDS 40.0%
TCGAAGCTCACAAGATAGTT+GGG + chr1_1:46318630-46318649 Msa0024150:CDS 40.0%
GAAATTGCAAAGAGACTTCC+TGG + chr1_1:46318665-46318684 Msa0024150:CDS 40.0%
! TTCCAACTATTTCGTCGGTT+CGG - chr1_1:46318758-46318777 None:intergenic 40.0%
AACCGACGAAATAGTTGGAA+AGG + chr1_1:46318758-46318777 Msa0024150:CDS 40.0%
CTCAATGTTCATCATGTTGG+TGG - chr1_1:46318852-46318871 None:intergenic 40.0%
AACATCACTAAGACTAGGGT+TGG - chr1_1:46318903-46318922 None:intergenic 40.0%
! GAGTGTGGTGTTAACTTTGA+AGG + chr1_1:46318938-46318957 Msa0024150:CDS 40.0%
! TGAAGGTTTGGTTACTTCAG+TGG + chr1_1:46318955-46318974 Msa0024150:CDS 40.0%
GTTACTTCAGTGGAAGAACT+TGG + chr1_1:46318965-46318984 Msa0024150:CDS 40.0%
!! GTTGAATGGTGATGATGGAA+TGG + chr1_1:46319006-46319025 Msa0024150:CDS 40.0%
!!! GGGATCTCTGGTTTTTCTAG+AGG - chr1_1:46316371-46316390 None:intergenic 45.0%
GCAGGTGTAAGAGTAGAACT+TGG - chr1_1:46316413-46316432 None:intergenic 45.0%
CCAGTGTAATTAGATGGTGC+AGG - chr1_1:46316431-46316450 None:intergenic 45.0%
CCTGCACCATCTAATTACAC+TGG + chr1_1:46316428-46316447 Msa0024150:CDS 45.0%
TGATGGTTCACCCCATTAAG+AGG - chr1_1:46316491-46316510 None:intergenic 45.0%
GGTGAACCATCACACTTCTA+TGG + chr1_1:46316499-46316518 Msa0024150:CDS 45.0%
CACACGACTGCAAACATCAA+TGG + chr1_1:46316569-46316588 Msa0024150:CDS 45.0%
!! AACTAGTGATGGTGGTAGAG+AGG - chr1_1:46316714-46316733 None:intergenic 45.0%
CTTGATCATGGTCTTCTGGT+TGG - chr1_1:46316745-46316764 None:intergenic 45.0%
CAACCAGAAGACCATGATCA+AGG + chr1_1:46316743-46316762 Msa0024150:CDS 45.0%
TGACCAGATGCGACAAAAGA+AGG + chr1_1:46316778-46316797 Msa0024150:CDS 45.0%
! GAACCTTCTTTTGTCGCATC+TGG - chr1_1:46316784-46316803 None:intergenic 45.0%
! AATGGACTCGTGATGAGGAT+GGG + chr1_1:46316852-46316871 Msa0024150:CDS 45.0%
CCTTAATGTCTGGTCGAAGA+TGG - chr1_1:46317184-46317203 None:intergenic 45.0%
CCATCTTCGACCAGACATTA+AGG + chr1_1:46317181-46317200 Msa0024150:CDS 45.0%
TGGTATTTATAGCCTGCCGT+GGG - chr1_1:46317558-46317577 None:intergenic 45.0%
GACTGATGATTCGATCCCTT+GGG - chr1_1:46317595-46317614 None:intergenic 45.0%
AGACTGATGATTCGATCCCT+TGG - chr1_1:46317596-46317615 None:intergenic 45.0%
GGGTTCAGAATCGTATGCTA+GGG - chr1_1:46317622-46317641 None:intergenic 45.0%
AGGGTTCAGAATCGTATGCT+AGG - chr1_1:46317623-46317642 None:intergenic 45.0%
GAAAGAGTCATGGAGTGAAG+AGG + chr1_1:46318592-46318611 Msa0024150:intron 45.0%
ACTTCAGTGGAAGAACTTGG+TGG + chr1_1:46318968-46318987 Msa0024150:CDS 45.0%
GGCACAATGAGTCATGAGAT+TGG + chr1_1:46319040-46319059 Msa0024150:CDS 45.0%
!!! AATAATTTTTTTATTTTTGT+AGG + chr1_1:46317054-46317073 Msa0024150:intron 5.0%
!!! TTTTTTTTTGAAAAAATATT+TGG + chr1_1:46318232-46318251 Msa0024150:intron 5.0%
TGGTTGCAAGAGAACCAGTG+CGG - chr1_1:46316393-46316412 None:intergenic 50.0%
GTTTGCAGTCGTGTGCGAAA+GGG - chr1_1:46316564-46316583 None:intergenic 50.0%
TGTTTGCAGTCGTGTGCGAA+AGG - chr1_1:46316565-46316584 None:intergenic 50.0%
CATCCTCATCACGAGTCCAT+TGG - chr1_1:46316853-46316872 None:intergenic 50.0%
! CAATGGACTCGTGATGAGGA+TGG + chr1_1:46316851-46316870 Msa0024150:CDS 50.0%
CAGAAGCGGAAAACAGTGCA+GGG + chr1_1:46317145-46317164 Msa0024150:CDS 50.0%
GAAAACAGTGCAGGGAGAGA+TGG + chr1_1:46317153-46317172 Msa0024150:CDS 50.0%
! AGTCCTTCTGGAGGTCTTCT+AGG - chr1_1:46317352-46317371 None:intergenic 50.0%
AGGACTCCGAAACCTCCTTA+AGG + chr1_1:46317366-46317385 Msa0024150:intron 50.0%
GGACTCCGAAACCTCCTTAA+GGG + chr1_1:46317367-46317386 Msa0024150:intron 50.0%
GACTCCGAAACCTCCTTAAG+GGG + chr1_1:46317368-46317387 Msa0024150:intron 50.0%
TACGCCCCTTAAGGAGGTTT+CGG - chr1_1:46317375-46317394 None:intergenic 50.0%
! GCGGTTTCTAGAAGGCCAAT+GGG - chr1_1:46317472-46317491 None:intergenic 50.0%
GTGGTATTTATAGCCTGCCG+TGG - chr1_1:46317559-46317578 None:intergenic 50.0%
!! ACTCTTGGGAGCATTCCCAA+GGG + chr1_1:46317577-46317596 Msa0024150:intron 50.0%
AGAACTCCGTCAAGAACCGT+TGG + chr1_1:46318696-46318715 Msa0024150:CDS 50.0%
GGAGTTCCAACGGTTCTTGA+CGG - chr1_1:46318705-46318724 None:intergenic 50.0%
TCGGCTTCTTTGTAGCGTTC+AGG - chr1_1:46318739-46318758 None:intergenic 50.0%
AGCCGAACCGACGAAATAGT+TGG + chr1_1:46318753-46318772 Msa0024150:CDS 50.0%
!! GGTGATGATGGAATGGCAAG+TGG + chr1_1:46319013-46319032 Msa0024150:CDS 50.0%
AAAACCAGAGATCCCCGCAC+TGG + chr1_1:46316376-46316395 Msa0024150:CDS 55.0%
GTTGCAAGAGAACCAGTGCG+GGG - chr1_1:46316391-46316410 None:intergenic 55.0%
GGTTGCAAGAGAACCAGTGC+GGG - chr1_1:46316392-46316411 None:intergenic 55.0%
CAGTCGTGTGCGAAAGGGTT+TGG - chr1_1:46316559-46316578 None:intergenic 55.0%
! AGGCCAATGGACTCGTGATG+AGG + chr1_1:46316847-46316866 Msa0024150:CDS 55.0%
GCAGAAGCGGAAAACAGTGC+AGG + chr1_1:46317144-46317163 Msa0024150:CDS 55.0%
!! TGGAGGTCTTCTAGGACCCT+AGG - chr1_1:46317344-46317363 None:intergenic 55.0%
GGTCCTAGAAGACCTCCAGA+AGG + chr1_1:46317346-46317365 Msa0024150:intron 55.0%
AGGTTTCGGAGTCCTTCTGG+AGG - chr1_1:46317361-46317380 None:intergenic 55.0%
AGGAGGTTTCGGAGTCCTTC+TGG - chr1_1:46317364-46317383 None:intergenic 55.0%
! TAGAGCCTCCAGAAGGGCAT+GGG + chr1_1:46317393-46317412 Msa0024150:intron 55.0%
!! TGCTAAAGGCGTTGGCCCAT+TGG + chr1_1:46317454-46317473 Msa0024150:intron 55.0%
! GGCGGTTTCTAGAAGGCCAA+TGG - chr1_1:46317473-46317492 None:intergenic 55.0%
! GGGCTTGGGCTTTGGTTACT+TGG - chr1_1:46317538-46317557 None:intergenic 55.0%
GTAACCAAAGCCCAAGCCCA+CGG + chr1_1:46317539-46317558 Msa0024150:intron 55.0%
TTATAGCCTGCCGTGGGCTT+GGG - chr1_1:46317552-46317571 None:intergenic 55.0%
TTTATAGCCTGCCGTGGGCT+TGG - chr1_1:46317553-46317572 None:intergenic 55.0%
CTTGGGAATGCTCCCAAGAG+TGG - chr1_1:46317578-46317597 None:intergenic 55.0%
!! CACTCTTGGGAGCATTCCCA+AGG + chr1_1:46317576-46317595 Msa0024150:intron 55.0%
ACGGAGTTCTCAGTACGTCC+AGG - chr1_1:46318686-46318705 None:intergenic 55.0%
TGCGCTTAGCGGAGTTCCAA+CGG - chr1_1:46318715-46318734 None:intergenic 55.0%
GATGGAATGGCAAGTGGCTC+TGG + chr1_1:46319019-46319038 Msa0024150:CDS 55.0%
AGAACCAGTGCGGGGATCTC+TGG - chr1_1:46316383-46316402 None:intergenic 60.0%
AGGCTCTACGCCCCTTAAGG+AGG - chr1_1:46317381-46317400 None:intergenic 60.0%
TGGAGGCTCTACGCCCCTTA+AGG - chr1_1:46317384-46317403 None:intergenic 60.0%
GTAGAGCCTCCAGAAGGGCA+TGG + chr1_1:46317392-46317411 Msa0024150:intron 60.0%
AGCGTTCAGGCTGCGCTTAG+CGG - chr1_1:46318726-46318745 None:intergenic 60.0%
! AGGGGCGTAGAGCCTCCAGA+AGG + chr1_1:46317386-46317405 Msa0024150:intron 65.0%
GGGGCGTAGAGCCTCCAGAA+GGG + chr1_1:46317387-46317406 Msa0024150:intron 65.0%
! GCGCGCTCTGCTAAAGGCGT+TGG + chr1_1:46317446-46317465 Msa0024150:intron 65.0%
CCTGGGGGGGTCCTTCTGGA+GGG - chr1_1:46317421-46317440 None:intergenic 70.0%
CCTCCAGAAGGACCCCCCCA+GGG + chr1_1:46317419-46317438 Msa0024150:intron 70.0%
GGCCTGGCGCGCTCTGCTAA+AGG + chr1_1:46317440-46317459 Msa0024150:intron 70.0%
CGCCTTTAGCAGAGCGCGCC+AGG - chr1_1:46317445-46317464 None:intergenic 70.0%
CCTGCCGTGGGCTTGGGCTT+TGG - chr1_1:46317546-46317565 None:intergenic 70.0%
CCAAAGCCCAAGCCCACGGC+AGG + chr1_1:46317543-46317562 Msa0024150:intron 70.0%
GGGCGCCCATGCCCTTCTGG+AGG - chr1_1:46317401-46317420 None:intergenic 75.0%
!! GGAGGGCGCCCATGCCCTTC+TGG - chr1_1:46317404-46317423 None:intergenic 75.0%
GGGCATGGGCGCCCTCCAGA+AGG + chr1_1:46317407-46317426 Msa0024150:intron 75.0%
CCCTCCAGAAGGACCCCCCC+AGG + chr1_1:46317418-46317437 Msa0024150:intron 75.0%
CCCTGGGGGGGTCCTTCTGG+AGG - chr1_1:46317422-46317441 None:intergenic 75.0%
AGGCCCTGGGGGGGTCCTTC+TGG - chr1_1:46317425-46317444 None:intergenic 75.0%
AGAAGGACCCCCCCAGGGCC+TGG + chr1_1:46317424-46317443 Msa0024150:intron 75.0%
AGCAGAGCGCGCCAGGCCCT+GGG - chr1_1:46317438-46317457 None:intergenic 75.0%
TAGCAGAGCGCGCCAGGCCC+TGG - chr1_1:46317439-46317458 None:intergenic 75.0%
! AGAGCGCGCCAGGCCCTGGG+GGG - chr1_1:46317435-46317454 None:intergenic 80.0%
! CAGAGCGCGCCAGGCCCTGG+GGG - chr1_1:46317436-46317455 None:intergenic 80.0%
! GCAGAGCGCGCCAGGCCCTG+GGG - chr1_1:46317437-46317456 None:intergenic 80.0%
! GAGCGCGCCAGGCCCTGGGG+GGG - chr1_1:46317434-46317453 None:intergenic 85.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 46316305 46319105 46316305 ID=Msa0024150;Name=Msa0024150
chr1_1 mRNA 46316305 46319105 46316305 ID=Msa0024150-mRNA-1;Parent=Msa0024150;Name=Msa0024150-mRNA-1;_AED=0.05;_eAED=0.05;_QI=0|0|0|1|1|1|3|0|402
chr1_1 exon 46316305 46316873 46316305 ID=Msa0024150-mRNA-1:exon:13189;Parent=Msa0024150-mRNA-1
chr1_1 exon 46317076 46317202 46317076 ID=Msa0024150-mRNA-1:exon:13190;Parent=Msa0024150-mRNA-1
chr1_1 exon 46318593 46319105 46318593 ID=Msa0024150-mRNA-1:exon:13191;Parent=Msa0024150-mRNA-1
chr1_1 CDS 46316305 46316873 46316305 ID=Msa0024150-mRNA-1:cds;Parent=Msa0024150-mRNA-1
chr1_1 CDS 46317076 46317202 46317076 ID=Msa0024150-mRNA-1:cds;Parent=Msa0024150-mRNA-1
chr1_1 CDS 46318593 46319105 46318593 ID=Msa0024150-mRNA-1:cds;Parent=Msa0024150-mRNA-1
Gene Sequence

>Msa0024150

ATGGAATTCGATCCAAGTTTTCCAGAAAGAATTCCTTATCTATTTGAAAATTTTCCTAAAATTCCTCTAGAAAAACCAGAGATCCCCGCACTGGTTCTCTTGCAACCAAGTTCTACTCTTACACCTGCACCATCTAATTACACTGGTTTTTTGTACCATAAATCCAATCAATATAAGGAACATCCTCTTAATGGGGTGAACCATCACACTTCTATGGTAGTTCCTTCCTCCATCAAACCATTTTCAATGAACCAAACCCTTTCGCACACGACTGCAAACATCAATGGAACCCAGAGAGAATTTTTCATCGATCAAAATCCAATGACTTTTACACCAAACTATAACGAAATGGAAGCCATGCATGACCTCCTTCAATATGGTGAAACTTCACAATCTCGAGTAATTTCCTCTCTACCACCATCACTAGTTTATGGAAACCAACCAGAAGACCATGATCAAGGAAACATTCTCATTGACCAGATGCGACAAAAGAAGGTTCACAAAGACAGGGAAATTCAACAAAAAGAATCCAATATAAGAAAAGGCCAATGGACTCGTGATGAGGATGGGATTCTTGTCAAATTGTTGGACTATTCTGGGTTTAATAACTGGTCTCAGATTGCTAAGTTTATGAATGGCAGAAGCGGAAAACAGTGCAGGGAGAGATGGCATAACCATCTTCGACCAGACATTAAGAAAGAGTCATGGAGTGAAGAGGAAGATAGAATATTGATCGAAGCTCACAAGATAGTTGGGAACAAGTTTGCTGAAATTGCAAAGAGACTTCCTGGACGTACTGAGAACTCCGTCAAGAACCGTTGGAACTCCGCTAAGCGCAGCCTGAACGCTACAAAGAAGCCGAACCGACGAAATAGTTGGAAAGGAACACTACTTCATAAATACATCAACGAAATCACTAATTCTAAGGATGTTCAGAAGGTGCCGAAAAATTCCACCAACATGATGAACATTGAGTATCAGACAAATTTCGACAATACATATACCAACCCTAGTCTTAGTGATGTTCGATATGAAATTTCAGAGTGTGGTGTTAACTTTGAAGGTTTGGTTACTTCAGTGGAAGAACTTGGTGGCAATGTGACAATGATGTTGAATGGTGATGATGGAATGGCAAGTGGCTCTGGCACAATGAGTCATGAGATTGGATCGTATCAAATGGAGTTTTTTCCTCATGTTAGTGATCTATAG
Protein sequence

>Msa0024150

MEFDPSFPERIPYLFENFPKIPLEKPEIPALVLLQPSSTLTPAPSNYTGFLYHKSNQYKEHPLNGVNHHTSMVVPSSIKPFSMNQTLSHTTANINGTQREFFIDQNPMTFTPNYNEMEAMHDLLQYGETSQSRVISSLPPSLVYGNQPEDHDQGNILIDQMRQKKVHKDREIQQKESNIRKGQWTRDEDGILVKLLDYSGFNNWSQIAKFMNGRSGKQCRERWHNHLRPDIKKESWSEEEDRILIEAHKIVGNKFAEIAKRLPGRTENSVKNRWNSAKRSLNATKKPNRRNSWKGTLLHKYINEITNSKDVQKVPKNSTNMMNIEYQTNFDNTYTNPSLSDVRYEISECGVNFEGLVTSVEELGGNVTMMLNGDDGMASGSGTMSHEIGSYQMEFFPHVSDL*