AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0024790

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0024790 MtrunA17_Chr1g0179101 97.439 859 20 1 1 857 1 859 0.0 1711
Msa0024790 MtrunA17_Chr7g0266031 71.121 883 222 14 1 857 1 876 0.0 1167
Msa0024790 MtrunA17_Chr2g0290691 64.399 441 150 6 392 825 127 567 0.0 587
Msa0024790 MtrunA17_Chr8g0335351 58.386 471 169 8 367 818 258 720 0.0 551
Msa0024790 MtrunA17_Chr7g0250631 59.023 471 172 9 400 857 299 761 0.0 551
Msa0024790 MtrunA17_Chr7g0227331 67.363 383 119 3 443 819 207 589 0.0 546
Msa0024790 MtrunA17_Chr6g0449401 58.225 462 148 5 399 819 193 650 0.0 536
Msa0024790 MtrunA17_Chr2g0309421 55.605 446 180 6 424 857 132 571 1.90e-163 488
Msa0024790 MtrunA17_Chr8g0356291 58.015 393 154 7 443 829 101 488 5.87e-152 456
Msa0024790 MtrunA17_Chr4g0063311 53.061 392 169 4 443 819 66 457 6.12e-139 421
Msa0024790 MtrunA17_Chr2g0321101 53.018 381 152 6 447 812 66 434 1.03e-127 391
Msa0024790 MtrunA17_Chr8g0381091 49.250 400 166 7 436 819 45 423 2.29e-125 385
Msa0024790 MtrunA17_Chr2g0285711 50.000 392 162 9 443 821 57 427 3.54e-125 384
Msa0024790 MtrunA17_Chr2g0312641 44.708 463 208 15 407 857 33 459 3.70e-112 351
Msa0024790 MtrunA17_Chr4g0030361 45.745 376 156 4 443 818 282 609 1.33e-105 339
Msa0024790 MtrunA17_Chr8g0369091 44.241 382 168 4 443 824 572 908 3.05e-103 341
Msa0024790 MtrunA17_Chr2g0327561 45.263 380 163 4 443 818 601 939 3.75e-101 336
Msa0024790 MtrunA17_Chr4g0032761 39.305 374 194 9 465 819 10 369 3.21e-76 254
Msa0024790 MtrunA17_Chr2g0329011 39.944 358 176 7 465 819 12 333 3.36e-75 250
Msa0024790 MtrunA17_Chr8g0338741 39.733 375 190 10 465 825 15 367 5.04e-75 251
Msa0024790 MtrunA17_Chr7g0234641 38.172 372 198 9 460 819 1 352 2.43e-70 238
Msa0024790 MtrunA17_Chr6g0478601 37.719 342 168 8 467 807 108 405 2.98e-59 211
Msa0024790 MtrunA17_Chr5g0428981 36.550 342 171 8 467 807 760 1056 3.42e-59 219
Msa0024790 MtrunA17_Chr4g0018201 36.257 342 172 8 467 807 756 1052 7.01e-59 218
Msa0024790 MtrunA17_Chr3g0135951 32.258 372 213 11 443 807 67 406 6.68e-48 178
Msa0024790 MtrunA17_Chr1g0187581 31.335 367 212 8 459 820 106 437 2.66e-47 177
Msa0024790 MtrunA17_Chr1g0153321 31.831 355 204 9 459 810 97 416 4.30e-46 173
Msa0024790 MtrunA17_Chr1g0183651 31.063 367 212 10 459 820 109 439 6.86e-45 170
Msa0024790 MtrunA17_Chr1g0167351 30.491 387 226 11 465 842 105 457 9.35e-45 169
Msa0024790 MtrunA17_Chr7g0261491 30.458 371 213 10 459 820 109 443 2.02e-44 169
Msa0024790 MtrunA17_Chr2g0299781 30.029 343 207 8 469 807 112 425 1.60e-41 160
Msa0024790 MtrunA17_Chr1g0167311 28.947 380 233 8 442 819 87 431 1.07e-40 157
Msa0024790 MtrunA17_Chr7g0245031 37.107 159 98 1 465 623 143 299 1.17e-26 114
Msa0024790 MtrunA17_Chr7g0245031 47.748 111 55 2 698 807 301 409 7.94e-24 105
Msa0024790 MtrunA17_Chr4g0059751 37.126 167 91 4 460 617 80 241 1.43e-26 113
Msa0024790 MtrunA17_Chr4g0059751 41.964 112 62 2 698 808 249 358 1.23e-24 107
Msa0024790 MtrunA17_Chr1g0197721 36.667 150 89 2 467 614 48 193 1.24e-25 111
Msa0024790 MtrunA17_Chr1g0197721 36.800 125 76 2 695 818 212 334 4.71e-15 79.0
Msa0024790 MtrunA17_Chr8g0351491 27.300 337 164 8 467 803 13 268 8.17e-24 102
Msa0024790 MtrunA17_Chr3g0125381 35.294 153 89 2 651 803 65 207 7.37e-23 97.8
Msa0024790 MtrunA17_Chr3g0125381 35.922 103 62 2 520 621 2 101 8.01e-12 65.9
Msa0024790 MtrunA17_Chr3g0080101 41.892 148 70 2 1 148 1 132 7.55e-22 101
Msa0024790 MtrunA17_Chr8g0353621 27.164 335 163 8 467 801 7 260 5.78e-21 94.0
Msa0024790 MtrunA17_Chr3g0140631 36.129 155 93 2 467 619 34 184 2.21e-20 92.8
Msa0024790 MtrunA17_Chr3g0140631 37.963 108 63 1 695 802 185 288 4.88e-17 82.8
Msa0024790 MtrunA17_Chr6g0453681 26.549 339 165 9 467 803 16 272 2.09e-19 92.4
Msa0024790 MtrunA17_Chr2g0284031 26.462 325 163 7 465 788 26 275 4.74e-19 91.7
Msa0024790 MtrunA17_Chr6g0468751 26.627 338 164 9 467 802 16 271 5.20e-19 91.7
Msa0024790 MtrunA17_Chr4g0013131 32.903 155 101 2 463 617 5 156 4.10e-18 88.2
Msa0024790 MtrunA17_Chr3g0114511 33.548 155 98 1 463 617 25 174 2.32e-17 85.9
Msa0024790 MtrunA17_Chr6g0486661 36.434 129 74 4 695 818 909 1034 3.21e-17 87.0
Msa0024790 MtrunA17_Chr3g0132671 26.302 384 163 16 467 816 16 313 4.19e-17 85.5
Msa0024790 MtrunA17_Chr8g0379091 25.704 284 137 6 465 747 21 231 2.57e-16 82.8
Msa0024790 MtrunA17_Chr7g0244521 29.000 200 128 4 463 661 5 191 3.54e-16 82.4
Msa0024790 MtrunA17_Chr3g0107011 29.814 161 109 2 457 617 2 158 3.97e-16 82.0
Msa0024790 MtrunA17_Chr4g0001331 31.757 148 98 1 470 617 20 164 1.05e-15 80.9
Msa0024790 MtrunA17_Chr1g0205421 23.269 361 196 7 461 820 3 283 1.28e-15 80.5
Msa0024790 MtrunA17_Chr1g0188031 32.680 153 99 4 467 617 17 167 1.58e-15 80.1
Msa0024790 MtrunA17_Chr5g0432471 29.139 151 104 2 467 617 9 156 3.10e-15 79.3
Msa0024790 MtrunA17_Chr8g0346071 27.950 161 114 1 470 630 17 175 4.96e-15 78.6
Msa0024790 MtrunA17_Chr2g0284011 28.866 194 120 6 463 653 5 183 6.96e-15 78.2
Msa0024790 MtrunA17_Chr3g0107051 31.757 148 98 2 470 617 21 165 7.39e-15 78.2
Msa0024790 MtrunA17_Chr2g0304111 30.000 150 99 2 470 617 23 168 8.17e-15 77.8
Msa0024790 MtrunA17_Chr4g0074111 30.323 155 105 2 462 616 10 161 1.16e-14 77.0
Msa0024790 MtrunA17_Chr7g0272841 33.557 149 88 4 476 617 74 218 1.30e-14 78.2
Msa0024790 MtrunA17_Chr6g0450571 31.818 154 101 3 465 617 11 161 2.17e-14 77.4
Msa0024790 MtrunA17_Chr8g0346081 27.950 161 114 2 470 630 17 175 2.79e-14 76.3
Msa0024790 MtrunA17_Chr2g0286501 33.117 154 93 3 467 619 46 190 3.59e-14 77.0
Msa0024790 MtrunA17_Chr3g0091311 30.968 155 104 1 463 617 5 156 4.62e-14 73.2
Msa0024790 MtrunA17_Chr2g0302431 30.189 159 109 2 459 617 9 165 5.18e-14 75.5
Msa0024790 MtrunA17_Chr7g0274941 38.318 107 59 3 698 801 171 273 6.53e-14 73.6
Msa0024790 MtrunA17_Chr7g0274941 30.201 149 99 3 468 614 14 159 1.53e-12 69.3
Msa0024790 MtrunA17_Chr1g0190131 37.624 101 57 2 703 801 167 263 8.31e-14 72.8
Msa0024790 MtrunA17_Chr3g0130151 32.278 158 99 3 474 627 248 401 9.96e-14 75.1
Msa0024790 MtrunA17_Chr5g0441011 31.707 123 78 2 497 617 40 158 1.03e-13 74.3
Msa0024790 MtrunA17_Chr4g0008561 37.736 106 60 3 699 802 175 276 1.47e-13 74.7
Msa0024790 MtrunA17_Chr1g0190831 28.571 154 104 3 467 617 1 151 1.88e-13 74.3
Msa0024790 MtrunA17_Chr2g0321841 29.375 160 105 4 467 621 1 157 2.41e-13 74.3
Msa0024790 MtrunA17_Chr1g0150321 32.051 156 101 2 462 617 7 157 2.73e-13 72.8
Msa0024790 MtrunA17_Chr4g0025671 29.221 154 103 3 467 617 5 155 3.38e-13 73.9
Msa0024790 MtrunA17_Chr1g0166101 29.605 152 104 2 467 617 21 170 5.09e-13 72.0
Msa0024790 MtrunA17_Chr5g0428031 25.153 163 116 2 470 630 9 167 5.38e-13 72.0
Msa0024790 MtrunA17_Chr5g0432491 31.757 148 99 2 470 617 23 168 5.63e-13 72.0
Msa0024790 MtrunA17_Chr2g0317001 31.081 148 98 2 470 617 15 158 6.07e-13 72.8
Msa0024790 MtrunA17_Chr8g0386981 33.562 146 89 3 476 617 414 555 9.15e-13 72.4
Msa0024790 MtrunA17_Chr4g0000431 29.221 154 105 3 465 617 19 169 1.03e-12 72.0
Msa0024790 MtrunA17_Chr1g0203881 34.211 152 94 4 470 617 41 190 1.12e-12 71.6
Msa0024790 MtrunA17_Chr5g0419441 30.405 148 100 2 470 617 239 383 1.73e-12 71.2
Msa0024790 MtrunA17_Chr4g0047191 23.361 244 114 3 517 760 94 264 1.96e-12 69.7
Msa0024790 MtrunA17_Chr4g0061141 31.844 179 97 7 452 617 85 251 2.10e-12 70.9
Msa0024790 MtrunA17_Chr1g0188991 23.315 356 184 11 468 818 13 284 2.12e-12 70.9
Msa0024790 MtrunA17_Chr1g0176751 34.746 118 64 4 700 815 283 389 2.42e-12 70.5
Msa0024790 MtrunA17_Chr1g0170551 34.906 106 63 2 701 806 162 261 2.43e-12 71.2
Msa0024790 MtrunA17_Chr1g0202831 30.137 146 98 3 474 617 415 558 3.56e-12 70.5
Msa0024790 MtrunA17_Chr2g0333821 33.108 148 96 2 470 617 14 158 3.76e-12 69.3
Msa0024790 MtrunA17_Chr7g0252301 30.952 168 107 4 469 633 854 1015 3.80e-12 70.5
Msa0024790 MtrunA17_Chr8g0384301 31.210 157 102 4 474 627 303 456 5.08e-12 69.7
Msa0024790 MtrunA17_Chr4g0063881 30.894 123 79 2 497 617 38 156 5.72e-12 68.9
Msa0024790 MtrunA17_Chr1g0173921 27.389 157 112 2 467 622 1 156 6.99e-12 69.7
Msa0024790 MtrunA17_Chr1g0200601 35.032 157 95 5 467 618 26 180 7.21e-12 68.9
Msa0024790 MtrunA17_Chr2g0330211 30.667 150 99 3 470 617 18 164 7.88e-12 68.9
Msa0024790 MtrunA17_Chr4g0040141 33.544 158 84 6 470 617 129 275 8.83e-12 68.9
Msa0024790 MtrunA17_Chr3g0132591 36.054 147 80 4 476 619 118 253 9.11e-12 68.6
Msa0024790 MtrunA17_Chr8g0385341 31.613 155 96 4 470 618 30 180 1.40e-11 67.8
Msa0024790 MtrunA17_Chr1g0185221 27.922 154 105 3 467 617 1 151 1.55e-11 68.2
Msa0024790 MtrunA17_Chr7g0258051 26.452 155 110 3 467 619 13 165 1.59e-11 68.2
Msa0024790 MtrunA17_Chr4g0047211 22.951 244 115 3 517 760 89 259 2.06e-11 66.6
Msa0024790 MtrunA17_Chr3g0131861 33.125 160 84 7 469 617 96 243 6.25e-11 65.9
Msa0024790 MtrunA17_Chr2g0276831 31.737 167 99 6 474 633 14 172 8.17e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0024790 AT3G52890.2 52.824 956 330 32 1 857 1 934 0.0 829
Msa0024790 AT3G52890.4 52.824 956 330 32 1 857 1 934 0.0 829
Msa0024790 AT3G52890.1 52.824 956 330 32 1 857 1 934 0.0 829
Msa0024790 AT3G52890.3 52.824 956 330 32 1 857 1 934 0.0 829
Msa0024790 AT2G36350.1 50.466 965 354 24 1 857 1 949 0.0 804
Msa0024790 AT5G03640.2 70.742 458 105 10 419 857 479 926 0.0 659
Msa0024790 AT5G03640.2 33.077 390 189 13 1 371 1 337 3.20e-30 129
Msa0024790 AT5G03640.1 70.742 458 105 10 419 857 479 926 0.0 659
Msa0024790 AT5G03640.1 33.077 390 189 13 1 371 1 337 3.20e-30 129
Msa0024790 AT5G47750.1 61.345 476 173 7 392 857 112 586 0.0 587
Msa0024790 AT4G26610.1 62.850 428 154 4 401 825 54 479 0.0 556
Msa0024790 AT5G55910.2 60.970 433 152 7 403 825 44 469 4.09e-180 528
Msa0024790 AT5G55910.1 60.970 433 152 7 403 825 44 469 4.09e-180 528
Msa0024790 AT2G44830.2 61.882 425 148 7 408 825 303 720 7.55e-180 537
Msa0024790 AT2G44830.3 61.882 425 148 7 408 825 303 720 7.55e-180 537
Msa0024790 AT2G44830.1 61.882 425 148 7 408 825 303 720 7.55e-180 537
Msa0024790 AT3G27580.2 64.398 382 130 6 443 819 153 533 2.27e-172 511
Msa0024790 AT3G27580.1 64.398 382 130 6 443 819 153 533 2.27e-172 511
Msa0024790 AT5G40030.1 57.631 439 163 9 430 857 73 499 7.18e-170 502
Msa0024790 AT3G12690.1 62.368 380 131 3 443 820 158 527 5.28e-165 492
Msa0024790 AT3G12690.3 62.368 380 131 3 443 820 158 527 5.28e-165 492
Msa0024790 AT3G12690.2 62.368 380 131 3 443 820 158 527 5.28e-165 492
Msa0024790 AT1G79250.1 60.614 391 152 2 436 824 112 502 6.59e-165 491
Msa0024790 AT1G79250.3 60.614 391 152 2 436 824 112 502 6.59e-165 491
Msa0024790 AT1G79250.2 60.614 391 152 2 436 824 112 502 6.59e-165 491
Msa0024790 AT1G79250.4 60.614 391 152 2 436 824 112 502 6.59e-165 491
Msa0024790 AT1G16440.1 59.375 384 143 5 443 824 86 458 1.82e-155 464
Msa0024790 AT3G44610.1 55.000 360 130 7 475 812 74 423 2.68e-128 393
Msa0024790 AT2G34650.1 52.972 387 147 8 443 819 50 411 4.68e-128 392
Msa0024790 AT2G26700.1 45.575 452 180 9 425 819 40 482 2.76e-125 387
Msa0024790 AT5G58140.6 45.333 375 160 2 444 818 551 880 7.59e-104 342
Msa0024790 AT5G58140.7 45.333 375 160 2 444 818 551 880 7.59e-104 342
Msa0024790 AT5G58140.5 45.333 375 160 2 444 818 551 880 7.59e-104 342
Msa0024790 AT5G58140.2 45.333 375 160 2 444 818 551 880 7.59e-104 342
Msa0024790 AT5G58140.1 45.333 375 160 2 444 818 551 880 7.59e-104 342
Msa0024790 AT3G14370.1 44.764 382 171 6 445 817 61 411 1.12e-103 329
Msa0024790 AT5G58140.3 45.380 368 156 2 444 811 551 873 2.65e-102 338
Msa0024790 AT1G53700.1 45.128 390 169 9 445 823 66 421 1.60e-98 316
Msa0024790 AT3G45780.2 43.883 376 168 2 443 818 636 968 2.04e-97 327
Msa0024790 AT3G45780.1 43.883 376 168 2 443 818 636 968 2.04e-97 327
Msa0024790 AT1G51170.1 39.674 368 183 9 465 819 17 358 4.01e-71 240
Msa0024790 AT3G20830.1 39.221 385 191 11 464 831 15 373 4.39e-71 240
Msa0024790 AT4G13000.1 36.388 371 199 10 465 831 15 352 6.86e-67 228
Msa0024790 AT3G25250.1 35.829 374 195 9 459 819 6 347 2.05e-65 225
Msa0024790 AT1G45160.2 38.162 359 166 8 465 817 665 973 7.91e-59 218
Msa0024790 AT1G45160.1 38.162 359 166 8 465 817 665 973 1.97e-58 217
Msa0024790 AT1G48490.3 37.391 345 163 10 465 807 823 1116 6.34e-58 216
Msa0024790 AT1G48490.2 37.391 345 163 10 465 807 823 1116 6.34e-58 216
Msa0024790 AT1G48490.1 37.391 345 163 10 465 807 823 1116 6.34e-58 216
Msa0024790 AT1G48490.4 37.391 345 163 10 465 807 824 1117 6.41e-58 216
Msa0024790 AT5G62310.1 37.026 343 169 10 467 807 751 1048 1.32e-57 215
Msa0024790 AT3G17850.1 37.135 342 170 8 467 807 879 1176 5.00e-57 213
Msa0024790 AT1G30640.2 30.688 378 225 8 448 821 98 442 2.71e-49 184
Msa0024790 AT1G30640.1 30.688 378 225 8 448 821 98 442 2.71e-49 184
Msa0024790 AT1G30640.3 30.423 378 226 8 448 821 5 349 3.60e-49 181
Msa0024790 AT4G14350.2 31.414 382 220 9 445 820 94 439 3.48e-46 174
Msa0024790 AT4G14350.1 31.414 382 220 9 445 820 94 439 3.48e-46 174
Msa0024790 AT4G14350.4 31.414 382 220 9 445 820 94 439 3.48e-46 174
Msa0024790 AT4G14350.3 31.414 382 220 9 445 820 94 439 4.01e-46 174
Msa0024790 AT2G20470.3 30.280 393 228 10 459 842 113 468 4.48e-45 171
Msa0024790 AT1G03920.1 30.894 369 210 10 459 820 126 456 5.25e-45 171
Msa0024790 AT1G03920.3 30.894 369 210 10 459 820 126 456 5.25e-45 171
Msa0024790 AT2G20470.2 30.280 393 228 10 459 842 113 468 6.22e-45 171
Msa0024790 AT2G20470.1 30.280 393 228 10 459 842 113 468 6.22e-45 171
Msa0024790 AT5G09890.2 30.812 357 201 8 459 807 91 409 7.73e-45 170
Msa0024790 AT5G09890.1 30.812 357 201 8 459 807 91 409 7.74e-45 170
Msa0024790 AT3G23310.1 28.970 466 276 14 363 820 24 442 8.05e-45 171
Msa0024790 AT1G03920.2 30.894 369 210 10 459 820 13 343 1.22e-44 168
Msa0024790 AT4G33080.2 29.351 385 233 10 445 820 69 423 1.43e-44 169
Msa0024790 AT4G33080.1 29.351 385 233 10 445 820 69 423 1.55e-44 169
Msa0024790 AT2G19400.1 29.598 348 212 8 465 807 100 419 2.30e-38 151
Msa0024790 AT5G58140.4 43.511 131 74 0 444 574 551 681 4.17e-29 124
Msa0024790 AT3G08720.1 38.710 155 93 1 463 617 133 285 3.17e-28 119
Msa0024790 AT3G08720.1 48.673 113 54 3 696 807 291 400 8.66e-27 115
Msa0024790 AT3G08720.3 38.710 155 93 1 463 617 133 285 3.17e-28 119
Msa0024790 AT3G08720.3 48.673 113 54 3 696 807 291 400 8.66e-27 115
Msa0024790 AT3G08720.4 38.710 155 93 1 463 617 133 285 3.17e-28 119
Msa0024790 AT3G08720.4 48.673 113 54 3 696 807 291 400 8.66e-27 115
Msa0024790 AT3G08720.2 38.710 155 93 1 463 617 133 285 3.17e-28 119
Msa0024790 AT3G08720.2 48.673 113 54 3 696 807 291 400 8.66e-27 115
Msa0024790 AT2G25090.1 27.976 336 167 9 470 802 15 278 5.66e-28 119
Msa0024790 AT3G08730.1 38.065 155 94 1 463 617 127 279 9.53e-28 118
Msa0024790 AT3G08730.1 49.558 113 53 3 696 807 285 394 1.53e-27 117
Msa0024790 AT3G08730.2 38.065 155 94 1 463 617 127 279 9.53e-28 118
Msa0024790 AT3G08730.2 49.558 113 53 3 696 807 285 394 1.53e-27 117
Msa0024790 AT5G04510.3 35.196 179 104 3 438 614 18 186 2.34e-26 110
Msa0024790 AT5G04510.2 35.196 179 104 3 438 614 18 186 2.70e-26 112
Msa0024790 AT5G04510.2 35.938 128 78 3 695 820 205 330 2.20e-18 89.0
Msa0024790 AT5G04510.1 35.196 179 104 3 438 614 18 186 3.94e-26 113
Msa0024790 AT5G04510.1 35.938 128 78 3 695 820 205 330 2.09e-18 89.7
Msa0024790 AT3G10540.1 35.196 179 104 3 438 614 19 187 1.94e-25 111
Msa0024790 AT3G10540.1 35.156 128 79 3 695 820 206 331 6.79e-18 88.2
Msa0024790 AT2G20050.2 42.241 116 61 3 698 810 931 1043 5.63e-20 96.3
Msa0024790 AT2G20050.1 42.241 116 61 3 698 810 934 1046 5.69e-20 96.3
Msa0024790 AT2G45490.1 41.905 105 57 1 698 802 173 273 9.43e-20 90.9
Msa0024790 AT2G45490.1 33.117 154 99 2 467 619 19 169 3.90e-17 83.2
Msa0024790 AT4G18700.1 26.543 324 162 7 465 787 21 269 1.28e-19 93.6
Msa0024790 AT3G01090.3 26.685 371 182 12 467 834 16 299 2.16e-19 93.2
Msa0024790 AT3G01090.1 26.685 371 182 12 467 834 16 299 2.16e-19 93.2
Msa0024790 AT5G45810.1 25.455 330 170 7 459 787 17 271 2.68e-19 92.4
Msa0024790 AT3G01090.2 26.685 371 182 12 467 834 39 322 2.85e-19 92.8
Msa0024790 AT3G29160.3 25.959 339 167 9 467 803 17 273 8.49e-19 89.7
Msa0024790 AT3G29160.1 25.959 339 167 9 467 803 17 273 1.72e-18 90.1
Msa0024790 AT3G29160.2 25.959 339 167 9 467 803 17 273 1.72e-18 90.1
Msa0024790 AT2G25880.2 40.187 107 60 1 695 801 141 243 2.04e-18 86.3
Msa0024790 AT5G45820.1 32.484 157 103 2 461 617 3 156 2.75e-18 89.0
Msa0024790 AT2G25880.1 40.187 107 60 1 695 801 173 275 3.09e-18 86.7
Msa0024790 AT2G25880.1 28.708 209 139 3 469 675 24 224 1.21e-17 84.7
Msa0024790 AT5G18700.1 35.484 155 92 3 467 621 1 147 3.33e-18 90.9
Msa0024790 AT2G25880.4 40.187 107 60 1 695 801 186 288 3.34e-18 86.7
Msa0024790 AT2G25880.4 28.708 209 139 3 469 675 37 237 3.31e-17 84.0
Msa0024790 AT2G34180.1 24.355 349 184 8 456 803 43 312 8.87e-18 87.8
Msa0024790 AT2G25880.3 40.187 107 60 1 695 801 234 336 9.42e-18 86.3
Msa0024790 AT2G25880.3 28.708 209 139 3 469 675 85 285 1.06e-16 83.2
Msa0024790 AT4G32830.1 35.714 154 93 2 467 618 28 177 1.10e-17 85.1
Msa0024790 AT4G32830.1 38.318 107 62 1 695 801 179 281 3.27e-17 83.6
Msa0024790 AT5G25110.1 31.977 172 110 3 449 617 20 187 2.25e-17 86.7
Msa0024790 AT2G45490.2 33.117 154 99 2 467 619 19 169 4.04e-17 82.4
Msa0024790 AT2G45490.2 39.024 82 50 0 698 779 173 254 3.16e-13 71.2
Msa0024790 AT1G29230.1 25.078 319 163 6 470 787 74 317 7.02e-17 85.1
Msa0024790 AT1G12680.1 33.333 159 96 4 469 626 106 255 1.94e-16 83.6
Msa0024790 AT5G10930.1 34.667 150 92 5 470 617 12 157 4.61e-16 82.0
Msa0024790 AT4G14580.1 32.051 156 103 3 463 617 14 167 5.75e-16 81.6
Msa0024790 AT4G24400.1 29.448 163 109 2 470 630 9 167 8.15e-16 81.3
Msa0024790 AT4G24400.2 29.448 163 109 2 470 630 9 167 9.44e-16 80.9
Msa0024790 AT5G01810.1 32.911 158 102 3 464 621 7 160 1.55e-15 80.5
Msa0024790 AT5G01810.2 32.911 158 102 3 464 621 7 160 1.55e-15 80.5
Msa0024790 AT5G01810.3 32.911 158 102 3 464 621 7 160 2.49e-15 79.3
Msa0024790 AT5G58380.1 22.222 333 181 8 470 802 12 266 4.57e-15 79.3
Msa0024790 AT1G08650.1 38.835 103 57 2 703 803 176 274 7.60e-15 76.6
Msa0024790 AT3G06030.1 34.694 147 89 4 476 617 74 218 8.10e-15 79.0
Msa0024790 AT3G23000.1 32.468 154 97 3 467 617 22 171 8.27e-15 78.2
Msa0024790 AT3G04810.2 29.870 154 102 3 467 617 1 151 1.08e-14 78.6
Msa0024790 AT3G04810.1 29.870 154 102 3 467 617 1 151 1.08e-14 78.6
Msa0024790 AT3G04810.3 29.870 154 102 3 467 617 1 151 1.08e-14 78.6
Msa0024790 AT1G70430.3 31.373 153 103 1 465 617 11 161 1.43e-14 78.2
Msa0024790 AT1G70430.4 31.373 153 103 1 465 617 11 161 1.56e-14 78.2
Msa0024790 AT1G70430.1 31.373 153 103 1 465 617 11 161 1.64e-14 78.2
Msa0024790 AT1G53570.7 32.121 165 106 5 466 627 210 371 1.82e-14 77.8
Msa0024790 AT1G53570.6 32.121 165 106 5 466 627 210 371 1.84e-14 77.8
Msa0024790 AT1G30270.1 32.667 150 95 4 470 617 31 176 1.86e-14 77.4
Msa0024790 AT1G08650.2 41.304 92 52 1 703 792 176 267 2.07e-14 75.1
Msa0024790 AT1G53570.1 32.121 165 106 5 466 627 210 371 2.88e-14 77.4
Msa0024790 AT1G30270.2 32.667 150 95 4 470 617 31 176 3.05e-14 76.6
Msa0024790 AT1G53570.2 32.121 165 106 5 466 627 210 371 3.08e-14 77.0
Msa0024790 AT1G53570.3 32.121 165 106 5 466 627 210 371 3.08e-14 77.0
Msa0024790 AT1G53570.4 32.121 165 106 5 466 627 210 371 3.14e-14 77.0
Msa0024790 AT5G57630.1 27.673 159 107 3 463 617 2 156 5.24e-14 75.5
Msa0024790 AT5G57630.2 27.673 159 107 3 463 617 2 156 5.51e-14 75.5
Msa0024790 AT3G17510.1 28.033 239 135 7 467 673 17 250 5.81e-14 75.5
Msa0024790 AT5G14720.1 31.169 154 102 3 465 617 11 161 6.68e-14 76.3
Msa0024790 AT5G14720.2 31.169 154 102 3 465 617 11 161 6.68e-14 76.3
Msa0024790 AT1G09000.1 32.653 147 92 4 476 617 75 219 8.78e-14 75.9
Msa0024790 AT1G09000.2 32.653 147 92 4 476 617 75 219 8.95e-14 75.9
Msa0024790 AT2G30360.1 32.903 155 97 5 470 621 21 171 9.62e-14 74.7
Msa0024790 AT1G01140.1 30.201 149 102 2 469 617 18 164 1.03e-13 74.7
Msa0024790 AT1G01140.2 30.201 149 102 2 469 617 18 164 1.04e-13 74.7
Msa0024790 AT1G01140.3 30.201 149 102 2 469 617 18 164 1.08e-13 74.7
Msa0024790 AT1G54960.1 32.653 147 92 4 476 617 74 218 1.56e-13 75.1
Msa0024790 AT1G54960.2 32.653 147 92 4 476 617 74 218 1.56e-13 75.1
Msa0024790 AT2G26980.2 33.058 121 79 2 497 617 41 159 2.39e-13 71.6
Msa0024790 AT5G28290.1 29.870 154 102 3 467 617 1 151 2.49e-13 74.3
Msa0024790 AT5G28290.2 29.870 154 102 3 467 617 1 151 2.49e-13 74.3
Msa0024790 AT5G28290.3 29.870 154 102 3 467 617 1 151 2.92e-13 73.9
Msa0024790 AT1G32320.1 32.895 152 92 3 467 617 45 187 3.27e-13 72.0
Msa0024790 AT2G26980.1 33.058 121 79 2 497 617 41 159 3.48e-13 72.8
Msa0024790 AT2G26980.3 33.058 121 79 2 497 617 41 159 3.79e-13 73.2
Msa0024790 AT3G04530.1 35.106 94 59 1 699 790 168 261 4.01e-13 71.2
Msa0024790 AT2G26980.5 33.058 121 79 2 497 617 41 159 4.35e-13 72.8
Msa0024790 AT2G26980.4 33.058 121 79 2 497 617 51 169 4.36e-13 72.8
Msa0024790 AT4G30960.1 33.108 148 96 2 470 617 24 168 6.15e-13 72.4
Msa0024790 AT3G44200.2 29.375 160 105 4 467 621 5 161 6.68e-13 73.2
Msa0024790 AT3G44200.1 29.375 160 105 4 467 621 5 161 6.68e-13 73.2
Msa0024790 AT4G09570.1 35.669 157 94 5 467 618 21 175 8.51e-13 72.4
Msa0024790 AT5G39440.1 31.373 153 99 2 467 617 16 164 1.11e-12 72.0
Msa0024790 AT5G21326.1 31.707 123 78 2 497 617 40 158 1.21e-12 71.6
Msa0024790 AT5G38210.3 28.116 345 192 15 308 617 175 498 1.34e-12 72.0
Msa0024790 AT5G38210.2 28.116 345 192 15 308 617 193 516 1.42e-12 72.0
Msa0024790 AT5G39420.1 33.708 178 95 7 452 617 85 251 1.81e-12 71.6
Msa0024790 AT2G38490.1 33.987 153 88 5 470 617 28 172 2.57e-12 70.5
Msa0024790 AT1G54510.4 27.922 154 105 3 467 617 1 151 3.04e-12 70.9
Msa0024790 AT1G54510.2 27.922 154 105 3 467 617 1 151 3.04e-12 70.9
Msa0024790 AT1G54510.1 27.922 154 105 3 467 617 1 151 3.04e-12 70.9
Msa0024790 AT1G54510.3 27.922 154 105 3 467 617 1 151 3.04e-12 70.9
Msa0024790 AT4G24100.1 29.139 151 103 2 468 617 31 178 3.59e-12 70.9
Msa0024790 AT4G24100.2 29.139 151 103 2 468 617 31 178 3.84e-12 70.5
Msa0024790 AT4G24100.4 29.139 151 103 2 468 617 47 194 4.36e-12 70.5
Msa0024790 AT5G35410.2 28.824 170 111 4 497 662 38 201 4.73e-12 69.3
Msa0024790 AT4G24100.3 29.139 151 103 2 468 617 47 194 5.18e-12 70.1
Msa0024790 AT4G14480.1 30.201 149 101 2 470 617 15 161 5.52e-12 69.7
Msa0024790 AT1G69220.1 29.054 148 102 2 470 617 249 393 5.82e-12 70.1
Msa0024790 AT1G50240.3 34.951 103 61 2 701 803 161 257 6.00e-12 70.5
Msa0024790 AT1G50240.2 34.951 103 61 2 701 803 161 257 6.00e-12 70.5
Msa0024790 AT1G24650.1 31.795 195 112 8 433 616 513 697 7.55e-12 69.7
Msa0024790 AT5G35410.1 28.824 170 111 4 497 662 38 201 8.26e-12 68.9
Msa0024790 AT1G53165.2 29.730 148 100 2 470 617 15 158 8.41e-12 69.3
Msa0024790 AT1G53165.1 29.730 148 100 2 470 617 15 158 8.44e-12 69.3
Msa0024790 AT1G53165.3 29.730 148 100 2 470 617 15 158 8.96e-12 69.3
Msa0024790 AT4G04720.2 30.323 155 98 4 470 618 80 230 9.41e-12 68.9
Msa0024790 AT4G04720.1 30.323 155 98 4 470 618 80 230 9.41e-12 68.9
Msa0024790 AT3G20860.1 25.828 151 111 1 467 617 1 150 9.52e-12 68.6
Msa0024790 AT1G35670.1 35.032 157 95 5 467 618 22 176 9.68e-12 68.9
Msa0024790 AT5G01820.1 32.237 152 100 2 470 621 22 170 1.03e-11 68.6
Msa0024790 AT2G41860.1 30.769 156 100 4 468 618 52 204 1.08e-11 68.9
Msa0024790 AT2G41860.2 30.769 156 100 4 468 618 52 204 1.12e-11 68.9
Msa0024790 AT3G15220.1 29.054 148 101 2 470 617 15 158 1.26e-11 68.9
Msa0024790 AT5G38210.1 30.303 264 153 11 366 617 260 504 1.65e-11 68.6
Msa0024790 AT2G01820.1 33.766 154 94 5 469 616 584 735 1.89e-11 68.6
Msa0024790 AT1G48260.1 31.646 158 96 5 466 617 5 156 2.98e-11 67.0
Msa0024790 AT1G63700.1 30.556 144 96 3 476 617 406 547 4.12e-11 67.4
Msa0024790 AT1G63700.2 30.556 144 96 3 476 617 406 547 4.12e-11 67.4
Msa0024790 AT1G73500.1 29.775 178 104 6 473 646 50 210 7.62e-11 64.7

Find 226 sgRNAs with CRISPR-Local

Find 370 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAATGTTCATCAAGTAAATT+TGG 0.123957 1_1:+47568440 Msa0024790:CDS
CAGCATTTCCATGGCAGTTT+AGG 0.171172 1_1:+47566664 Msa0024790:five_prime_UTR
CGTTCTTCGAGGGGCTTAAT+TGG 0.182487 1_1:+47571424 Msa0024790:CDS
CCAAAGCAGGGTTCTGATTC+TGG 0.182601 1_1:+47568740 Msa0024790:CDS
ATAGATCCTGCCAAGGTTTC+TGG 0.192162 1_1:+47570922 Msa0024790:CDS
GTGGGATAGCACAACGTATT+AGG 0.195471 1_1:-47571449 None:intergenic
TAATAGCAAACAAACAATTT+TGG 0.195592 1_1:-47569237 None:intergenic
TTCTTCCTGTGGATTCGTTT+TGG 0.221662 1_1:+47571626 Msa0024790:three_prime_UTR
CATAGGAATTAATGGATTAT+TGG 0.236625 1_1:-47571809 None:intergenic
TTTCGGAAGACTGAACATTT+TGG 0.262861 1_1:-47568367 None:intergenic
GAAGCTTCCTCCGCTGAAAC+TGG 0.270970 1_1:+47567881 Msa0024790:CDS
GTATATCTTTCTGAACTAAT+TGG 0.279231 1_1:+47569214 Msa0024790:CDS
TCCTCATCTACATCAATAAA+TGG 0.282055 1_1:+47568635 Msa0024790:CDS
ATATTCAGCATAGGAATTAA+TGG 0.296595 1_1:-47571817 None:intergenic
AGCATTTCCATGGCAGTTTA+GGG 0.299786 1_1:+47566665 Msa0024790:five_prime_UTR
CAAATGCAGCATGGAGTATT+AGG 0.309280 1_1:+47569139 Msa0024790:CDS
TTATAAGGTGTAGGAGGTTC+AGG 0.309504 1_1:+47571734 Msa0024790:three_prime_UTR
ATTTCAATGTGCTTACTTGC+AGG 0.309956 1_1:+47566770 Msa0024790:five_prime_UTR
TTCATTGATGCGAAGTGATT+TGG 0.314477 1_1:+47568418 Msa0024790:CDS
TTCCCGGCCTCTGATATTCT+TGG 0.322131 1_1:-47568173 None:intergenic
TTTGAATGGGTTCTAATGAT+TGG 0.331451 1_1:-47568472 None:intergenic
AATGTTCATCAAGTAAATTT+GGG 0.332717 1_1:+47568441 Msa0024790:CDS
CTAACGTTGACAGCAGTAAA+AGG 0.334602 1_1:+47568249 Msa0024790:CDS
TTACTGCTGTCAACGTTAGA+AGG 0.345198 1_1:-47568245 None:intergenic
AATGTCAGTGGTTCTAGTTT+TGG 0.355133 1_1:+47569064 Msa0024790:CDS
TCACAAAGGTCTGGAAGTTC+TGG 0.355191 1_1:-47571471 None:intergenic
TGTAGGAGGTTCAGGTTATA+TGG 0.355958 1_1:+47571742 Msa0024790:three_prime_UTR
TCCCTCTCCTTTGATGATCT+CGG 0.360706 1_1:-47571157 None:intergenic
CTCTCTGGGCCAGCACCAAC+TGG 0.361010 1_1:+47568911 Msa0024790:CDS
GTCACTGATGCTAGGAGATC+AGG 0.362583 1_1:+47568221 Msa0024790:CDS
TCATACTACATTGAATTTAG+TGG 0.367257 1_1:+47567727 Msa0024790:five_prime_UTR
AAGAGACCTATGTATATCTA+AGG 0.380607 1_1:+47568103 Msa0024790:CDS
TTCAAGTTTATTCCATCTGC+AGG 0.380968 1_1:-47568881 None:intergenic
AACTTTGGACTTGTTCCATC+TGG 0.386270 1_1:-47567990 None:intergenic
CTGGTTTGAATTCTGAAAGC+TGG 0.386620 1_1:+47567599 Msa0024790:five_prime_UTR
TACAACATAGGCTTACATAA+TGG 0.387314 1_1:-47571677 None:intergenic
GCAGTTGCAGAAAATGAAAC+AGG 0.388859 1_1:+47568392 Msa0024790:CDS
AGGATATATCTGTCCAGTTC+AGG 0.393900 1_1:+47567834 Msa0024790:CDS
TTAGTTATGTACCTTGCTGC+TGG 0.394633 1_1:-47569472 None:intergenic
GCAGTTGATTGGTGGACTTT+TGG 0.396090 1_1:+47571189 Msa0024790:CDS
AACTTGAAGAGCGTGCTCTC+TGG 0.398133 1_1:+47568896 Msa0024790:CDS
CGAGGTACACCCATTGTCAT+TGG 0.406906 1_1:-47568032 None:intergenic
TCCCTTTCAGTTTGTGCCCT+AGG 0.407081 1_1:-47569301 None:intergenic
ATCTCCAATGGGCTCGTACT+CGG 0.410861 1_1:+47567758 Msa0024790:exon
AAACTAACAAATGGGCTATC+GGG 0.412241 1_1:-47571309 None:intergenic
TTCATTATTAGAACCTTTGA+AGG 0.413043 1_1:-47571247 None:intergenic
CACCTGCTTCTTCTGTATTG+TGG 0.414120 1_1:+47566723 Msa0024790:five_prime_UTR
GTACAATGTCTGTATCTTCC+CGG 0.414759 1_1:-47568189 None:intergenic
GTTCTTCGAGGGGCTTAATT+GGG 0.416732 1_1:+47571425 Msa0024790:CDS
CCAGAATCAGAACCCTGCTT+TGG 0.419048 1_1:-47568740 None:intergenic
TATATCTAAGGCATCGGAAA+TGG 0.420286 1_1:+47568115 Msa0024790:CDS
TCTCCAATGGGCTCGTACTC+GGG 0.421635 1_1:+47567759 Msa0024790:exon
GCCCCAGGTGGTAAGAATCT+AGG 0.421684 1_1:-47571015 None:intergenic
ATCATTAGAACCCATTCAAA+TGG 0.423949 1_1:+47568475 Msa0024790:CDS
GCAAGATCAAACTCATTTGT+TGG 0.426222 1_1:+47571114 Msa0024790:CDS
TTTGTTTGCTATTAAAGTAA+TGG 0.428001 1_1:+47569246 Msa0024790:CDS
CCCTCTCCTTTGATGATCTC+GGG 0.430280 1_1:-47571156 None:intergenic
CAACTCTACTTTACTTCCAT+TGG 0.431940 1_1:-47568537 None:intergenic
GACCTTTGTGAATTCGAGTT+GGG 0.431964 1_1:+47571483 Msa0024790:CDS
CTTTGATAAGATCCCTTGCT+TGG 0.432685 1_1:-47571332 None:intergenic
TACCTCGATCCCCACGAGTT+GGG 0.435212 1_1:+47568048 Msa0024790:CDS
TCTGTACCCAGTCGGTTCTC+AGG 0.437175 1_1:-47571372 None:intergenic
TTGAATGGGTTCTAATGATT+GGG 0.439666 1_1:-47568471 None:intergenic
CTTGCTTGGAAACTAACAAA+TGG 0.443465 1_1:-47571318 None:intergenic
AGTCCTAGATTCTTACCACC+TGG 0.445086 1_1:+47571012 Msa0024790:CDS
AACTGAAATACCTCCGGTGC+TGG 0.448025 1_1:+47568277 Msa0024790:CDS
TCTCGAACAAGAATGTTCTC+TGG 0.449274 1_1:-47570817 None:intergenic
AACCGACTGGGTACAGAGAA+AGG 0.450354 1_1:+47571378 Msa0024790:CDS
GATACAGACATTGTACAATT+CGG 0.451481 1_1:+47568196 Msa0024790:CDS
GTCACATAAATGGTAAAGAA+AGG 0.452115 1_1:+47567560 Msa0024790:five_prime_UTR
AAGGGAAATATTACGAATGC+TGG 0.453731 1_1:+47569318 Msa0024790:CDS
ATGAAAAGGTTATCAAAGTC+AGG 0.459032 1_1:+47568143 Msa0024790:CDS
TGCTGAAGTCCTTCTTGCGT+TGG 0.464637 1_1:+47570753 Msa0024790:CDS
AGCTACACTATATCCTGAAC+TGG 0.471806 1_1:-47567847 None:intergenic
GAAACTAACAAATGGGCTAT+CGG 0.472767 1_1:-47571310 None:intergenic
TGGGATAGCACAACGTATTA+GGG 0.473231 1_1:-47571448 None:intergenic
ACGGTAAAACGTGCTTTATA+AGG 0.476159 1_1:+47571719 Msa0024790:three_prime_UTR
TTGTTACAACCAGTTGGTGC+TGG 0.476500 1_1:-47568920 None:intergenic
AACTCGAATTCACAAAGGTC+TGG 0.477570 1_1:-47571480 None:intergenic
TATTTAGAGTGTACAACAAC+AGG 0.479866 1_1:+47571549 Msa0024790:CDS
TCAAAACTAATTTACAACAT+AGG 0.479924 1_1:-47571689 None:intergenic
GTGGAGGAAATTATCTCCAA+TGG 0.481226 1_1:+47567746 Msa0024790:exon
TCACATAAATGGTAAAGAAA+GGG 0.483507 1_1:+47567561 Msa0024790:five_prime_UTR
CGGAAATGGCTGCTATGAAA+AGG 0.484378 1_1:+47568129 Msa0024790:CDS
AATTAGTTCAGAAAGATATA+CGG 0.484594 1_1:-47569212 None:intergenic
AGGGATGTACACTTAAAGTC+TGG 0.486320 1_1:+47567580 Msa0024790:five_prime_UTR
ACTTGAAGAGCGTGCTCTCT+GGG 0.489162 1_1:+47568897 Msa0024790:CDS
AACATTCTTGTTCGAGAAGA+CGG 0.493896 1_1:+47570823 Msa0024790:CDS
GACATGGAGCTGCAGTTGAT+TGG 0.495502 1_1:+47571178 Msa0024790:CDS
TCCGCTGAAACTGGGATACA+AGG 0.498155 1_1:+47567890 Msa0024790:CDS
CTTGTCATGGAGTATTGTCC+TGG 0.498365 1_1:+47569397 Msa0024790:CDS
CTGCTGTTGTTACAACCAGT+TGG 0.502353 1_1:-47568926 None:intergenic
CAAGCAAGGGATCTTATCAA+AGG 0.504426 1_1:+47571333 Msa0024790:CDS
TTTATTCCATCTGCAGGGCC+CGG 0.504556 1_1:-47568875 None:intergenic
ACCGACTGGGTACAGAGAAA+GGG 0.510368 1_1:+47571379 Msa0024790:CDS
CAACAGTGGCATTCTTCCTG+TGG 0.511225 1_1:+47571615 Msa0024790:three_prime_UTR
CTTTGATGATCTCGGGCGCT+AGG 0.512710 1_1:-47571149 None:intergenic
CACTTGTTTGCAAGAGATGT+TGG 0.516581 1_1:+47568819 Msa0024790:CDS
TTCTCTGAGATCTTCGTCAA+GGG 0.516916 1_1:+47567953 Msa0024790:CDS
TGAGCCGGTGACTTTGAAGC+AGG 0.518357 1_1:+47568076 Msa0024790:CDS
GACTTGCTTTCTTCCAGCAC+CGG 0.520360 1_1:-47568290 None:intergenic
GCATAGAGTGTTGGAAGAAA+AGG 0.520558 1_1:-47569346 None:intergenic
TTGCTTGGAAACTAACAAAT+GGG 0.520604 1_1:-47571317 None:intergenic
ACGAGTTGGGATTTCTGAGC+CGG 0.520650 1_1:+47568061 Msa0024790:CDS
TTGGAGTACTTGCACATGCT+CGG 0.524862 1_1:+47570772 Msa0024790:CDS
CAAACAAGTGGAGTTGTAGC+AGG 0.526120 1_1:-47568806 None:intergenic
CTCCAAGAATATCAGAGGCC+GGG 0.526522 1_1:+47568171 Msa0024790:CDS
CCGATGCCTTAGATATACAT+AGG 0.527023 1_1:-47568109 None:intergenic
TATGGTAGAACACCCTTCAA+AGG 0.528632 1_1:+47571234 Msa0024790:CDS
CCCCTTTCTCTGTACCCAGT+CGG 0.530798 1_1:-47571380 None:intergenic
GCCTAGGGCACAAACTGAAA+GGG 0.531959 1_1:+47569300 Msa0024790:CDS
TGGAGGAAATTATCTCCAAT+GGG 0.532808 1_1:+47567747 Msa0024790:exon
AAACAACATCCGTTCTTCGA+GGG 0.532991 1_1:+47571414 Msa0024790:CDS
TGCCTAGGGCACAAACTGAA+AGG 0.533660 1_1:+47569299 Msa0024790:CDS
GAAGATGATTTCAGAAGTGT+CGG 0.534124 1_1:-47570895 None:intergenic
TGAGTTTGATCTTGCATCTG+TGG 0.534621 1_1:-47571106 None:intergenic
GGGTAAGAAGAAACCAAAGC+AGG 0.535267 1_1:+47568727 Msa0024790:CDS
TGTTCTCTGGTTTCAAATCA+CGG 0.536426 1_1:-47570804 None:intergenic
CAAAGGTCTGGAAGTTCTGG+TGG 0.537172 1_1:-47571468 None:intergenic
AGACCTTTGTGAATTCGAGT+TGG 0.538308 1_1:+47571482 Msa0024790:CDS
TGCACATGTACCAGAAACCT+TGG 0.539921 1_1:-47570932 None:intergenic
CTGGAAGAAAGCAAGTCGCT+TGG 0.540370 1_1:+47568296 Msa0024790:CDS
CATTTGTTAGTTTCCAAGCA+AGG 0.540412 1_1:+47571319 Msa0024790:CDS
CTTTGATGTATATTCAGCAT+AGG 0.541202 1_1:-47571826 None:intergenic
CTTCCATTGGTGTTACAACA+AGG 0.541296 1_1:-47568524 None:intergenic
GTGGGCTCTGCCACAAGTTG+TGG 0.543584 1_1:-47571087 None:intergenic
CTGCATTTGAGCATCTCGTA+TGG 0.544030 1_1:-47569125 None:intergenic
ATAACACCGGGCCCTGCAGA+TGG 0.544715 1_1:+47568869 Msa0024790:CDS
AAGCAAGGGATCTTATCAAA+GGG 0.546140 1_1:+47571334 Msa0024790:CDS
ATTTGTTAGTTTCCAAGCAA+GGG 0.546510 1_1:+47571320 Msa0024790:CDS
TCTCCAAGAATATCAGAGGC+CGG 0.547265 1_1:+47568170 Msa0024790:CDS
CGTGCTTTATAAGGTGTAGG+AGG 0.549001 1_1:+47571728 Msa0024790:three_prime_UTR
CAACATCTCTTGCAAACAAG+TGG 0.549095 1_1:-47568818 None:intergenic
CAGATCATTGCCACAACTTG+TGG 0.550134 1_1:+47571077 Msa0024790:CDS
CTTGTGAAATTGTTGAAGTG+AGG 0.551186 1_1:+47567784 Msa0024790:CDS
CATGTACCAGAAACCTTGGC+AGG 0.552486 1_1:-47570928 None:intergenic
GCCATTTATTGATGTAGATG+AGG 0.552846 1_1:-47568636 None:intergenic
TCAAGTTTATTCCATCTGCA+GGG 0.553310 1_1:-47568880 None:intergenic
CCACCTTGTTGTAACACCAA+TGG 0.553522 1_1:+47568521 Msa0024790:CDS
CACGAAGGAAGAAGATGCCT+AGG 0.553678 1_1:+47569284 Msa0024790:CDS
GTCCTAGATTCTTACCACCT+GGG 0.554174 1_1:+47571013 Msa0024790:CDS
AAACTTGGTTGTGGAGACAT+TGG 0.554545 1_1:+47569187 Msa0024790:CDS
TCACTGATGCTAGGAGATCA+GGG 0.558232 1_1:+47568222 Msa0024790:CDS
AAGCTTCCTCCGCTGAAACT+GGG 0.558427 1_1:+47567882 Msa0024790:CDS
TACCACCTGGGGCAAAAGCA+AGG 0.560142 1_1:+47571025 Msa0024790:CDS
TAACGTCACACCTGAGTGAA+AGG 0.560894 1_1:-47570870 None:intergenic
TTTCTCTGAGATCTTCGTCA+AGG 0.561091 1_1:+47567952 Msa0024790:CDS
ATGGAGCTGCAGTTGATTGG+TGG 0.561888 1_1:+47571181 Msa0024790:CDS
AAATCTGTCATGTCTTGTCA+TGG 0.562494 1_1:+47569384 Msa0024790:CDS
ATCATCAAAGGAGAGGGACA+TGG 0.563595 1_1:+47571162 Msa0024790:CDS
GAGTTTGATCTTGCATCTGT+GGG 0.564013 1_1:-47571105 None:intergenic
GATCGCACAGTCACAAAGCA+AGG 0.565695 1_1:+47571518 Msa0024790:CDS
CAATTAAGCCCCTCGAAGAA+CGG 0.565981 1_1:-47571423 None:intergenic
TAAACAACATCCGTTCTTCG+AGG 0.566000 1_1:+47571413 Msa0024790:CDS
ATTCGGTTGTCACTGATGCT+AGG 0.566463 1_1:+47568213 Msa0024790:CDS
GTACCTCGATCCCCACGAGT+TGG 0.569241 1_1:+47568047 Msa0024790:CDS
AAGCATGCAACTTGACAAGA+TGG 0.570439 1_1:-47570988 None:intergenic
ATCCACAATACAGAAGAAGC+AGG 0.570496 1_1:-47566725 None:intergenic
AACAACATCCGTTCTTCGAG+GGG 0.572629 1_1:+47571415 Msa0024790:CDS
AGATTCCTTCAGCATTTCCA+TGG 0.573595 1_1:+47566655 Msa0024790:five_prime_UTR
CAAAGTTCAAAGAGTAGCCA+AGG 0.577202 1_1:+47569004 Msa0024790:CDS
TAAAGAGCCTGAGAACCGAC+TGG 0.577374 1_1:+47571365 Msa0024790:CDS
ACTGACATTACTCTCGTCGC+TGG 0.577572 1_1:-47569050 None:intergenic
CCCGAGATCATCAAAGGAGA+GGG 0.579283 1_1:+47571156 Msa0024790:CDS
TACTACTGCTGTAGTCACCT+TGG 0.579611 1_1:-47569021 None:intergenic
AAAAGAAATATTGATGCCAA+AGG 0.580206 1_1:+47571868 Msa0024790:three_prime_UTR
TACAACAACAGGTGGACAAG+TGG 0.580591 1_1:+47571560 Msa0024790:CDS
AACTAACAAATGGGCTATCG+GGG 0.581176 1_1:-47571308 None:intergenic
TTCTGATATAGATCCTGCCA+AGG 0.581336 1_1:+47570915 Msa0024790:CDS
AATGCCTGCTTCAAAGTCAC+CGG 0.582267 1_1:-47568080 None:intergenic
GGCTCAGAAATCCCAACTCG+TGG 0.584426 1_1:-47568059 None:intergenic
TTGTGAAATTGTTGAAGTGA+GGG 0.584796 1_1:+47567785 Msa0024790:CDS
TTGCTTTCTTCCAGCACCGG+AGG 0.586528 1_1:-47568287 None:intergenic
TCCTTGTATCCCAGTTTCAG+CGG 0.586814 1_1:-47567891 None:intergenic
AATAAAGCATCTACACGGAA+AGG 0.586972 1_1:+47568593 Msa0024790:CDS
CCTATGTATATCTAAGGCAT+CGG 0.587384 1_1:+47568109 Msa0024790:CDS
GAGTTCAACTGAAATACCTC+CGG 0.587544 1_1:+47568271 Msa0024790:CDS
GCTCAGAAATCCCAACTCGT+GGG 0.587632 1_1:-47568058 None:intergenic
ATCCCAACTCGTGGGGATCG+AGG 0.588163 1_1:-47568050 None:intergenic
GCAAGTACTCCAACGCAAGA+AGG 0.591404 1_1:-47570762 None:intergenic
AGAGAAACCCTAAACTGCCA+TGG 0.593010 1_1:-47566672 None:intergenic
CAAGATGGTTCAATGCAGAA+TGG 0.593437 1_1:-47570973 None:intergenic
GAATTCTGAAAGCTGGATTG+CGG 0.594028 1_1:+47567606 Msa0024790:five_prime_UTR
AACTGCCATGGAAATGCTGA+AGG 0.594236 1_1:-47566660 None:intergenic
GTAAACTGTGCATAGAGTGT+TGG 0.596126 1_1:-47569355 None:intergenic
GGCACTGATAATTTAGTAGA+GGG 0.596237 1_1:-47566556 None:intergenic
CAGTTGCAGAAAATGAAACA+GGG 0.598118 1_1:+47568393 Msa0024790:CDS
GTTCCCGAGTACGAGCCCAT+TGG 0.599638 1_1:-47567762 None:intergenic
GCCCGAGATCATCAAAGGAG+AGG 0.600003 1_1:+47571155 Msa0024790:CDS
TTATTTGCTTCATTTGACTG+AGG 0.604064 1_1:-47568773 None:intergenic
TAGCAAAGGTAATATAACAC+CGG 0.604288 1_1:+47568856 Msa0024790:CDS
CAATAGGCCTCACATGTCAA+AGG 0.604784 1_1:+47569087 Msa0024790:CDS
TCATTATTAGAACCTTTGAA+GGG 0.605401 1_1:-47571246 None:intergenic
AAGATGATTTCAGAAGTGTC+GGG 0.605932 1_1:-47570894 None:intergenic
GATTTGAGCTATCTACCAGA+TGG 0.608922 1_1:+47567975 Msa0024790:CDS
CTAGCGCCCGAGATCATCAA+AGG 0.609684 1_1:+47571150 Msa0024790:CDS
GTTCTACGTCAGAAACAGCT+TGG 0.610473 1_1:+47569433 Msa0024790:CDS
AAACGTGCTTTATAAGGTGT+AGG 0.613452 1_1:+47571725 Msa0024790:three_prime_UTR
CTAAAATCCTTTGACATGTG+AGG 0.614502 1_1:-47569094 None:intergenic
AGAACATGAAGATCTCCTCC+AGG 0.614542 1_1:-47569415 None:intergenic
TACTACATTGAATTTAGTGG+AGG 0.615697 1_1:+47567730 Msa0024790:five_prime_UTR
ATGTTCATCAAGTAAATTTG+GGG 0.621811 1_1:+47568442 Msa0024790:CDS
TCCTAGATTCTTACCACCTG+GGG 0.624909 1_1:+47571014 Msa0024790:CDS
AGCAAAGGTAATATAACACC+GGG 0.625939 1_1:+47568857 Msa0024790:CDS
CGAGATGCTCAAATGCAGCA+TGG 0.626391 1_1:+47569130 Msa0024790:CDS
CTCAGAAATCCCAACTCGTG+GGG 0.627023 1_1:-47568057 None:intergenic
CCGACTGGGTACAGAGAAAG+GGG 0.629774 1_1:+47571380 Msa0024790:CDS
AGCTTCTCCAAGAATATCAG+AGG 0.631647 1_1:+47568166 Msa0024790:CDS
GGTAAGAAGAAACCAAAGCA+GGG 0.633251 1_1:+47568728 Msa0024790:CDS
AGACCCCAAAACGAATCCAC+AGG 0.633498 1_1:-47571631 None:intergenic
TGGCACTGATAATTTAGTAG+AGG 0.639549 1_1:-47566557 None:intergenic
TTGTATCCCAGTTTCAGCGG+AGG 0.645256 1_1:-47567888 None:intergenic
TTAGAGTGTACAACAACAGG+TGG 0.645501 1_1:+47571552 Msa0024790:CDS
ATCGCACAGTCACAAAGCAA+GGG 0.646722 1_1:+47571519 Msa0024790:CDS
AAAGAGCCTGAGAACCGACT+GGG 0.650422 1_1:+47571366 Msa0024790:CDS
TTAGTACAGTGAAAGATGCA+AGG 0.651962 1_1:+47567814 Msa0024790:CDS
GTCATGGAGTATTGTCCTGG+AGG 0.654376 1_1:+47569400 Msa0024790:CDS
TGTGAAATAGAAAATAGCAA+AGG 0.655331 1_1:+47568842 Msa0024790:CDS
ACGAAGGAAGAAGATGCCTA+GGG 0.660068 1_1:+47569285 Msa0024790:CDS
AAAGGTCTGGAAGTTCTGGT+GGG 0.661777 1_1:-47571467 None:intergenic
GCACAGTCACAAAGCAAGGG+TGG 0.674594 1_1:+47571522 Msa0024790:CDS
CTCCCAACTCGAATTCACAA+AGG 0.676959 1_1:-47571485 None:intergenic
TAGGAAATAAAGCATCTACA+CGG 0.687698 1_1:+47568588 Msa0024790:CDS
AGTTGCAGAAAATGAAACAG+GGG 0.694625 1_1:+47568394 Msa0024790:CDS
CCATTGGTGTTACAACAAGG+TGG 0.712169 1_1:-47568521 None:intergenic
AGCGACGAGAGTAATGTCAG+TGG 0.730559 1_1:+47569052 Msa0024790:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATTAAGTATATTAATACA+TGG - chr1_1:47567477-47567496 None:intergenic 10.0%
!!! CTATTTGAATTTATTTTTCA+TGG + chr1_1:47566946-47566965 Msa0024790:intron 15.0%
!! TTTGTTCAAATTATTAAGAA+AGG + chr1_1:47567213-47567232 Msa0024790:intron 15.0%
!! TTGTTCAAATTATTAAGAAA+GGG + chr1_1:47567214-47567233 Msa0024790:intron 15.0%
!!! TTTATTTCCTAATTTTTTAG+GGG - chr1_1:47568579-47568598 None:intergenic 15.0%
!!! CTTTATTTCCTAATTTTTTA+GGG - chr1_1:47568580-47568599 None:intergenic 15.0%
!!! TTGAATTTTGATATGTTTAT+AGG + chr1_1:47569656-47569675 Msa0024790:intron 15.0%
!! AATAAAGGATCTATAATAAA+AGG + chr1_1:47570061-47570080 Msa0024790:intron 15.0%
!!! TTTGAATTTATTTTTCATGG+AGG + chr1_1:47566949-47566968 Msa0024790:intron 20.0%
!! TAGTGAATATGAACAATAAT+TGG + chr1_1:47567070-47567089 Msa0024790:intron 20.0%
!!! CAATAATTGGTTTAATAGTT+TGG + chr1_1:47567083-47567102 Msa0024790:intron 20.0%
!! TATTGATGAAAATTAGAAAG+TGG + chr1_1:47567142-47567161 Msa0024790:intron 20.0%
!! TAAGTATATTAATACATGGA+AGG - chr1_1:47567473-47567492 None:intergenic 20.0%
!! AATGTTCATCAAGTAAATTT+GGG + chr1_1:47568441-47568460 Msa0024790:CDS 20.0%
!!! ATTTGTTTTTCCATTTGAAT+GGG - chr1_1:47568488-47568507 None:intergenic 20.0%
!!! GCTTTATTTCCTAATTTTTT+AGG - chr1_1:47568581-47568600 None:intergenic 20.0%
!! ATCATAAAAAACAAGAGTTT+GGG + chr1_1:47568707-47568726 Msa0024790:CDS 20.0%
!! AATTAGTTCAGAAAGATATA+CGG - chr1_1:47569215-47569234 None:intergenic 20.0%
!!! TAATAGCAAACAAACAATTT+TGG - chr1_1:47569240-47569259 None:intergenic 20.0%
!!! TTTGTTTGCTATTAAAGTAA+TGG + chr1_1:47569246-47569265 Msa0024790:CDS 20.0%
!!! TACACTTAGCTAAATTTTTA+AGG + chr1_1:47569925-47569944 Msa0024790:intron 20.0%
!! TAATAAAAGGTTATATGTCT+AGG + chr1_1:47570074-47570093 Msa0024790:intron 20.0%
!! TCAAAACTAATTTACAACAT+AGG - chr1_1:47571692-47571711 None:intergenic 20.0%
!!! AATTAGTTTTGATTATAGCA+CGG + chr1_1:47571700-47571719 Msa0024790:three_prime_UTR 20.0%
!!! ATTTCATTTTTCTTACATCG+TGG + chr1_1:47566531-47566550 Msa0024790:five_prime_UTR 25.0%
!!! TTTCATTTTTCTTACATCGT+GGG + chr1_1:47566532-47566551 Msa0024790:five_prime_UTR 25.0%
!!! TGTTTTGCAACTTTACTTTT+TGG + chr1_1:47566906-47566925 Msa0024790:intron 25.0%
!! ATTTGAGATTTGATCTGATT+TGG + chr1_1:47567109-47567128 Msa0024790:intron 25.0%
! GGTAAATAAGAGATAAATCA+AGG - chr1_1:47567261-47567280 None:intergenic 25.0%
! TTCAATTATTGACCAATATC+AGG + chr1_1:47567530-47567549 Msa0024790:intron 25.0%
!! AGGTTTTTATGTCACATAAA+TGG + chr1_1:47567550-47567569 Msa0024790:intron 25.0%
! TCACATAAATGGTAAAGAAA+GGG + chr1_1:47567561-47567580 Msa0024790:five_prime_UTR 25.0%
!! ATGAATCACAATAGACTTTT+TGG + chr1_1:47567679-47567698 Msa0024790:five_prime_UTR 25.0%
! TCATACTACATTGAATTTAG+TGG + chr1_1:47567727-47567746 Msa0024790:five_prime_UTR 25.0%
! TTAAAAAAGCCAATGACAAT+GGG + chr1_1:47568023-47568042 Msa0024790:CDS 25.0%
! GAATGTTCATCAAGTAAATT+TGG + chr1_1:47568440-47568459 Msa0024790:CDS 25.0%
! ATGTTCATCAAGTAAATTTG+GGG + chr1_1:47568442-47568461 Msa0024790:CDS 25.0%
!!! CATTTGTTTTTCCATTTGAA+TGG - chr1_1:47568489-47568508 None:intergenic 25.0%
! GATCATAAAAAACAAGAGTT+TGG + chr1_1:47568706-47568725 Msa0024790:CDS 25.0%
! TGTGAAATAGAAAATAGCAA+AGG + chr1_1:47568842-47568861 Msa0024790:CDS 25.0%
!!! TTCAATCTTTTGAAGAAACT+TGG + chr1_1:47569172-47569191 Msa0024790:CDS 25.0%
! GTATATCTTTCTGAACTAAT+TGG + chr1_1:47569214-47569233 Msa0024790:CDS 25.0%
!!! AGTAATGGACAATGAATTTT+TGG + chr1_1:47569261-47569280 Msa0024790:CDS 25.0%
!!! TTAGGATTTTGTTTTCCATT+TGG + chr1_1:47569516-47569535 Msa0024790:intron 25.0%
!! CATTCTCATCAATCATATTT+TGG + chr1_1:47569595-47569614 Msa0024790:intron 25.0%
!!! AAATTTTTAAGGTCTGAGTT+AGG + chr1_1:47569936-47569955 Msa0024790:intron 25.0%
! TCAAACTTAAGGTTAAAGTA+TGG + chr1_1:47569967-47569986 Msa0024790:intron 25.0%
! GAACTTTCAGAATTATTTGT+TGG - chr1_1:47570278-47570297 None:intergenic 25.0%
! TAAATAAAACAATTGCTCAC+TGG + chr1_1:47570369-47570388 Msa0024790:intron 25.0%
! AGTCAATAAAATTGTAGTGA+TGG - chr1_1:47570452-47570471 None:intergenic 25.0%
! ACATGAAAACACATATAGAT+TGG + chr1_1:47570681-47570700 Msa0024790:intron 25.0%
! TCATTATTAGAACCTTTGAA+GGG - chr1_1:47571249-47571268 None:intergenic 25.0%
! TTCATTATTAGAACCTTTGA+AGG - chr1_1:47571250-47571269 None:intergenic 25.0%
!!! CATAGGAATTAATGGATTAT+TGG - chr1_1:47571812-47571831 None:intergenic 25.0%
! ATATTCAGCATAGGAATTAA+TGG - chr1_1:47571820-47571839 None:intergenic 25.0%
! ATCTCTTATTTACCCTTCTT+TGG + chr1_1:47567267-47567286 Msa0024790:intron 30.0%
TCATTTGATAGACCAAAGAA+GGG - chr1_1:47567282-47567301 None:intergenic 30.0%
TTCATTTGATAGACCAAAGA+AGG - chr1_1:47567283-47567302 None:intergenic 30.0%
GTGACATAAAAACCTGATAT+TGG - chr1_1:47567545-47567564 None:intergenic 30.0%
GTCACATAAATGGTAAAGAA+AGG + chr1_1:47567560-47567579 Msa0024790:five_prime_UTR 30.0%
TACTACATTGAATTTAGTGG+AGG + chr1_1:47567730-47567749 Msa0024790:five_prime_UTR 30.0%
TTGTGAAATTGTTGAAGTGA+GGG + chr1_1:47567785-47567804 Msa0024790:CDS 30.0%
GTTAAAAAAGCCAATGACAA+TGG + chr1_1:47568022-47568041 Msa0024790:CDS 30.0%
AAGAGACCTATGTATATCTA+AGG + chr1_1:47568103-47568122 Msa0024790:CDS 30.0%
ATGAAAAGGTTATCAAAGTC+AGG + chr1_1:47568143-47568162 Msa0024790:CDS 30.0%
GATACAGACATTGTACAATT+CGG + chr1_1:47568196-47568215 Msa0024790:CDS 30.0%
!!! ATTTTGGCTCAATACACTTT+TGG - chr1_1:47568354-47568373 None:intergenic 30.0%
! ATTTTCTGCAACTGCAATTT+CGG - chr1_1:47568387-47568406 None:intergenic 30.0%
! TTGAATGGGTTCTAATGATT+GGG - chr1_1:47568474-47568493 None:intergenic 30.0%
! TTTGAATGGGTTCTAATGAT+TGG - chr1_1:47568475-47568494 None:intergenic 30.0%
ATCATTAGAACCCATTCAAA+TGG + chr1_1:47568475-47568494 Msa0024790:CDS 30.0%
GATTCTTCCCCTAAAAAATT+AGG + chr1_1:47568569-47568588 Msa0024790:CDS 30.0%
! TAGGAAATAAAGCATCTACA+CGG + chr1_1:47568588-47568607 Msa0024790:CDS 30.0%
TCCTCATCTACATCAATAAA+TGG + chr1_1:47568635-47568654 Msa0024790:CDS 30.0%
!! TTATGATCGATTTTACTGCT+CGG - chr1_1:47568694-47568713 None:intergenic 30.0%
TTATTTGCTTCATTTGACTG+AGG - chr1_1:47568776-47568795 None:intergenic 30.0%
TAGCAAAGGTAATATAACAC+CGG + chr1_1:47568856-47568875 Msa0024790:CDS 30.0%
GTTGCAAAAGTGAAAAAGAA+TGG + chr1_1:47568953-47568972 Msa0024790:CDS 30.0%
! ACATGTCAAAGGATTTTAGA+TGG + chr1_1:47569098-47569117 Msa0024790:CDS 30.0%
CATAACTAAGAACTACTGTT+CGG + chr1_1:47569486-47569505 Msa0024790:intron 30.0%
CTACTGTTCGGTAATATATT+AGG + chr1_1:47569498-47569517 Msa0024790:intron 30.0%
ATGATACAAATGTGACCAAA+TGG - chr1_1:47569534-47569553 None:intergenic 30.0%
AGGCAAGATTTCATCATTAT+AGG - chr1_1:47569893-47569912 None:intergenic 30.0%
! AGGCTTATTTCTCAAACTTA+AGG + chr1_1:47569956-47569975 Msa0024790:intron 30.0%
! ATGGTTTGTATGTAAACTCA+TGG + chr1_1:47569986-47570005 Msa0024790:intron 30.0%
TATGTAAACTCATGGAACAA+TGG + chr1_1:47569994-47570013 Msa0024790:intron 30.0%
ATGTAAACTCATGGAACAAT+GGG + chr1_1:47569995-47570014 Msa0024790:intron 30.0%
! AATAATTCTGAAAGTTCCCT+AGG + chr1_1:47570281-47570300 Msa0024790:intron 30.0%
AAAAAATTGCATGCACATAG+GGG - chr1_1:47570523-47570542 None:intergenic 30.0%
CAAAAAATTGCATGCACATA+GGG - chr1_1:47570524-47570543 None:intergenic 30.0%
TCAAAAAATTGCATGCACAT+AGG - chr1_1:47570525-47570544 None:intergenic 30.0%
GACAAAATTGCAGATCAAAA+GGG - chr1_1:47570634-47570653 None:intergenic 30.0%
TGACAAAATTGCAGATCAAA+AGG - chr1_1:47570635-47570654 None:intergenic 30.0%
TTCATGTAAAGTAGAAGGTT+TGG - chr1_1:47570668-47570687 None:intergenic 30.0%
! GTGTTTTCATGTAAAGTAGA+AGG - chr1_1:47570673-47570692 None:intergenic 30.0%
! TTTCTGTACGAGCTTTTATA+TGG + chr1_1:47571216-47571235 Msa0024790:CDS 30.0%
TTGCTTGGAAACTAACAAAT+GGG - chr1_1:47571320-47571339 None:intergenic 30.0%
! ATTTGTTAGTTTCCAAGCAA+GGG + chr1_1:47571320-47571339 Msa0024790:CDS 30.0%
! TATTTAGAGTGTACAACAAC+AGG + chr1_1:47571549-47571568 Msa0024790:CDS 30.0%
!!! TGGAATTTGAGTTGTTTTAG+AGG + chr1_1:47571580-47571599 Msa0024790:CDS 30.0%
TACAACATAGGCTTACATAA+TGG - chr1_1:47571680-47571699 None:intergenic 30.0%
CTTTGATGTATATTCAGCAT+AGG - chr1_1:47571829-47571848 None:intergenic 30.0%
!! GGCACTGATAATTTAGTAGA+GGG - chr1_1:47566559-47566578 None:intergenic 35.0%
!! TGGCACTGATAATTTAGTAG+AGG - chr1_1:47566560-47566579 None:intergenic 35.0%
!! TGTGTTATGCTTTTTAGCAC+TGG - chr1_1:47566580-47566599 None:intergenic 35.0%
ATTTCAATGTGCTTACTTGC+AGG + chr1_1:47566770-47566789 Msa0024790:five_prime_UTR 35.0%
! CTTCATTGTTGTTGTGCATA+TGG + chr1_1:47566991-47567010 Msa0024790:intron 35.0%
TGAACAAATCGAAACGACAA+GGG - chr1_1:47567201-47567220 None:intergenic 35.0%
TTGAACAAATCGAAACGACA+AGG - chr1_1:47567202-47567221 None:intergenic 35.0%
TGGAGGAAATTATCTCCAAT+GGG + chr1_1:47567747-47567766 Msa0024790:exon 35.0%
CTTGTGAAATTGTTGAAGTG+AGG + chr1_1:47567784-47567803 Msa0024790:CDS 35.0%
TTAGTACAGTGAAAGATGCA+AGG + chr1_1:47567814-47567833 Msa0024790:CDS 35.0%
! TTTAACGCGCTTTTCAACTT+TGG - chr1_1:47568008-47568027 None:intergenic 35.0%
! CCTATGTATATCTAAGGCAT+CGG + chr1_1:47568109-47568128 Msa0024790:CDS 35.0%
!! TATATCTAAGGCATCGGAAA+TGG + chr1_1:47568115-47568134 Msa0024790:CDS 35.0%
! TTTCGGAAGACTGAACATTT+TGG - chr1_1:47568370-47568389 None:intergenic 35.0%
CAGTTGCAGAAAATGAAACA+GGG + chr1_1:47568393-47568412 Msa0024790:CDS 35.0%
AGTTGCAGAAAATGAAACAG+GGG + chr1_1:47568394-47568413 Msa0024790:CDS 35.0%
TTCATTGATGCGAAGTGATT+TGG + chr1_1:47568418-47568437 Msa0024790:CDS 35.0%
CAACTCTACTTTACTTCCAT+TGG - chr1_1:47568540-47568559 None:intergenic 35.0%
! TTAGGGGAAGAATCTTTTTC+AGG - chr1_1:47568563-47568582 None:intergenic 35.0%
! AATAAAGCATCTACACGGAA+AGG + chr1_1:47568593-47568612 Msa0024790:CDS 35.0%
GCCATTTATTGATGTAGATG+AGG - chr1_1:47568639-47568658 None:intergenic 35.0%
!! TATGATCGATTTTACTGCTC+GGG - chr1_1:47568693-47568712 None:intergenic 35.0%
AGCAAAGGTAATATAACACC+GGG + chr1_1:47568857-47568876 Msa0024790:CDS 35.0%
TCAAGTTTATTCCATCTGCA+GGG - chr1_1:47568883-47568902 None:intergenic 35.0%
! TTCAAGTTTATTCCATCTGC+AGG - chr1_1:47568884-47568903 None:intergenic 35.0%
!!! AATGTCAGTGGTTCTAGTTT+TGG + chr1_1:47569064-47569083 Msa0024790:CDS 35.0%
CTAAAATCCTTTGACATGTG+AGG - chr1_1:47569097-47569116 None:intergenic 35.0%
!! CTTTTGAAGAAACTTGGTTG+TGG + chr1_1:47569178-47569197 Msa0024790:CDS 35.0%
!!! ACAATGAATTTTTGGCACGA+AGG + chr1_1:47569269-47569288 Msa0024790:CDS 35.0%
AAGGGAAATATTACGAATGC+TGG + chr1_1:47569318-47569337 Msa0024790:CDS 35.0%
AAATCTGTCATGTCTTGTCA+TGG + chr1_1:47569384-47569403 Msa0024790:CDS 35.0%
!!! CATATTTTGGCATGTGTTTC+TGG + chr1_1:47569608-47569627 Msa0024790:intron 35.0%
AGTGAGTGGATACTTAACAA+CGG - chr1_1:47569848-47569867 None:intergenic 35.0%
ATGATGAAATCTTGCCTGTA+CGG + chr1_1:47569896-47569915 Msa0024790:intron 35.0%
!! AATAATGGGTGGCTCAATAA+AGG + chr1_1:47570046-47570065 Msa0024790:intron 35.0%
! TCGCAATTAAGGCAGATTTT+TGG + chr1_1:47570247-47570266 Msa0024790:intron 35.0%
ACAAACAATTGCTTCTCCTA+GGG - chr1_1:47570300-47570319 None:intergenic 35.0%
AACAAACAATTGCTTCTCCT+AGG - chr1_1:47570301-47570320 None:intergenic 35.0%
TGACTTTATGTAGATTGCAC+TGG + chr1_1:47570467-47570486 Msa0024790:intron 35.0%
CAAGTTGCAAATTGTTTCGA+TGG + chr1_1:47570591-47570610 Msa0024790:intron 35.0%
ACGTAAAACCTGCATATACA+AGG - chr1_1:47570733-47570752 None:intergenic 35.0%
! TGTTCTCTGGTTTCAAATCA+CGG - chr1_1:47570807-47570826 None:intergenic 35.0%
AACATTCTTGTTCGAGAAGA+CGG + chr1_1:47570823-47570842 Msa0024790:CDS 35.0%
!! AAGATGATTTCAGAAGTGTC+GGG - chr1_1:47570897-47570916 None:intergenic 35.0%
! GAAGATGATTTCAGAAGTGT+CGG - chr1_1:47570898-47570917 None:intergenic 35.0%
GCAAGATCAAACTCATTTGT+TGG + chr1_1:47571114-47571133 Msa0024790:CDS 35.0%
!! AAACTAACAAATGGGCTATC+GGG - chr1_1:47571312-47571331 None:intergenic 35.0%
!! GAAACTAACAAATGGGCTAT+CGG - chr1_1:47571313-47571332 None:intergenic 35.0%
CTTGCTTGGAAACTAACAAA+TGG - chr1_1:47571321-47571340 None:intergenic 35.0%
! CATTTGTTAGTTTCCAAGCA+AGG + chr1_1:47571319-47571338 Msa0024790:CDS 35.0%
AAGCAAGGGATCTTATCAAA+GGG + chr1_1:47571334-47571353 Msa0024790:CDS 35.0%
ACGGTAAAACGTGCTTTATA+AGG + chr1_1:47571719-47571738 Msa0024790:three_prime_UTR 35.0%
AAACGTGCTTTATAAGGTGT+AGG + chr1_1:47571725-47571744 Msa0024790:three_prime_UTR 35.0%
AGATTCCTTCAGCATTTCCA+TGG + chr1_1:47566655-47566674 Msa0024790:five_prime_UTR 40.0%
AGCATTTCCATGGCAGTTTA+GGG + chr1_1:47566665-47566684 Msa0024790:five_prime_UTR 40.0%
ATCCACAATACAGAAGAAGC+AGG - chr1_1:47566728-47566747 None:intergenic 40.0%
AATGTGCTTACTTGCAGGTT+TGG + chr1_1:47566775-47566794 Msa0024790:intron 40.0%
! TTTCAGTTTTCGCATCGTCT+TGG + chr1_1:47567495-47567514 Msa0024790:intron 40.0%
AGGGATGTACACTTAAAGTC+TGG + chr1_1:47567580-47567599 Msa0024790:five_prime_UTR 40.0%
! CTGGTTTGAATTCTGAAAGC+TGG + chr1_1:47567599-47567618 Msa0024790:five_prime_UTR 40.0%
! GAATTCTGAAAGCTGGATTG+CGG + chr1_1:47567606-47567625 Msa0024790:five_prime_UTR 40.0%
GTGGAGGAAATTATCTCCAA+TGG + chr1_1:47567746-47567765 Msa0024790:exon 40.0%
AGGATATATCTGTCCAGTTC+AGG + chr1_1:47567834-47567853 Msa0024790:CDS 40.0%
AGCTACACTATATCCTGAAC+TGG - chr1_1:47567850-47567869 None:intergenic 40.0%
!! TTTCTCTGAGATCTTCGTCA+AGG + chr1_1:47567952-47567971 Msa0024790:CDS 40.0%
!! TTCTCTGAGATCTTCGTCAA+GGG + chr1_1:47567953-47567972 Msa0024790:CDS 40.0%
GATTTGAGCTATCTACCAGA+TGG + chr1_1:47567975-47567994 Msa0024790:CDS 40.0%
! AACTTTGGACTTGTTCCATC+TGG - chr1_1:47567993-47568012 None:intergenic 40.0%
CCGATGCCTTAGATATACAT+AGG - chr1_1:47568112-47568131 None:intergenic 40.0%
AGCTTCTCCAAGAATATCAG+AGG + chr1_1:47568166-47568185 Msa0024790:CDS 40.0%
GTACAATGTCTGTATCTTCC+CGG - chr1_1:47568192-47568211 None:intergenic 40.0%
TTACTGCTGTCAACGTTAGA+AGG - chr1_1:47568248-47568267 None:intergenic 40.0%
CTAACGTTGACAGCAGTAAA+AGG + chr1_1:47568249-47568268 Msa0024790:CDS 40.0%
GAGTTCAACTGAAATACCTC+CGG + chr1_1:47568271-47568290 Msa0024790:CDS 40.0%
GCAGTTGCAGAAAATGAAAC+AGG + chr1_1:47568392-47568411 Msa0024790:CDS 40.0%
!! CTTCCATTGGTGTTACAACA+AGG - chr1_1:47568527-47568546 None:intergenic 40.0%
!! ATGATCGATTTTACTGCTCG+GGG - chr1_1:47568692-47568711 None:intergenic 40.0%
GGTAAGAAGAAACCAAAGCA+GGG + chr1_1:47568728-47568747 Msa0024790:CDS 40.0%
CAACATCTCTTGCAAACAAG+TGG - chr1_1:47568821-47568840 None:intergenic 40.0%
CACTTGTTTGCAAGAGATGT+TGG + chr1_1:47568819-47568838 Msa0024790:CDS 40.0%
CAAAGTTCAAAGAGTAGCCA+AGG + chr1_1:47569004-47569023 Msa0024790:CDS 40.0%
!!! GTGGTTCTAGTTTTGGCAAT+AGG + chr1_1:47569071-47569090 Msa0024790:CDS 40.0%
! CAAATGCAGCATGGAGTATT+AGG + chr1_1:47569139-47569158 Msa0024790:CDS 40.0%
AAACTTGGTTGTGGAGACAT+TGG + chr1_1:47569187-47569206 Msa0024790:CDS 40.0%
!! GCATAGAGTGTTGGAAGAAA+AGG - chr1_1:47569349-47569368 None:intergenic 40.0%
GTAAACTGTGCATAGAGTGT+TGG - chr1_1:47569358-47569377 None:intergenic 40.0%
TTAGTTATGTACCTTGCTGC+TGG - chr1_1:47569475-47569494 None:intergenic 40.0%
TTTAGCCAGTGCATTCAATG+AGG + chr1_1:47569631-47569650 Msa0024790:intron 40.0%
CAAAACCTCATTGAATGCAC+TGG - chr1_1:47569639-47569658 None:intergenic 40.0%
! ATTCAAGTGTGCTGAGTTGA+GGG - chr1_1:47569811-47569830 None:intergenic 40.0%
AATTCAAGTGTGCTGAGTTG+AGG - chr1_1:47569812-47569831 None:intergenic 40.0%
AAGTATCCACTCACTCTTTC+TGG + chr1_1:47569853-47569872 Msa0024790:intron 40.0%
TGATGAAATCTTGCCTGTAC+GGG + chr1_1:47569897-47569916 Msa0024790:intron 40.0%
!! ACTCATGGAACAATGGGTTA+TGG + chr1_1:47570001-47570020 Msa0024790:intron 40.0%
!! CTCATGGAACAATGGGTTAT+GGG + chr1_1:47570002-47570021 Msa0024790:intron 40.0%
ATTATTGCACACCAAATGCG+TGG - chr1_1:47570032-47570051 None:intergenic 40.0%
!! ACGCATTTGGTGTGCAATAA+TGG + chr1_1:47570031-47570050 Msa0024790:intron 40.0%
!! CGCATTTGGTGTGCAATAAT+GGG + chr1_1:47570032-47570051 Msa0024790:intron 40.0%
!! ATTTGGTGTGCAATAATGGG+TGG + chr1_1:47570035-47570054 Msa0024790:intron 40.0%
AGTACCATTGCAATGAAGAC+AGG + chr1_1:47570186-47570205 Msa0024790:intron 40.0%
TATGCCTGTCTTCATTGCAA+TGG - chr1_1:47570193-47570212 None:intergenic 40.0%
CTTAATTGCGACTAACTCTG+CGG - chr1_1:47570238-47570257 None:intergenic 40.0%
TCTACTAAACAGTGTGGAAC+TGG - chr1_1:47570561-47570580 None:intergenic 40.0%
CTACTGTCTACTAAACAGTG+TGG - chr1_1:47570567-47570586 None:intergenic 40.0%
TCTCGAACAAGAATGTTCTC+TGG - chr1_1:47570820-47570839 None:intergenic 40.0%
!! CTGATTTTGACCTTTCACTC+AGG + chr1_1:47570860-47570879 Msa0024790:CDS 40.0%
TTCTGATATAGATCCTGCCA+AGG + chr1_1:47570915-47570934 Msa0024790:CDS 40.0%
CAAGATGGTTCAATGCAGAA+TGG - chr1_1:47570976-47570995 None:intergenic 40.0%
AAGCATGCAACTTGACAAGA+TGG - chr1_1:47570991-47571010 None:intergenic 40.0%
GAGTTTGATCTTGCATCTGT+GGG - chr1_1:47571108-47571127 None:intergenic 40.0%
TGAGTTTGATCTTGCATCTG+TGG - chr1_1:47571109-47571128 None:intergenic 40.0%
TATGGTAGAACACCCTTCAA+AGG + chr1_1:47571234-47571253 Msa0024790:CDS 40.0%
! GAGATTTTGCAACACGACAT+TGG - chr1_1:47571283-47571302 None:intergenic 40.0%
!! AACTAACAAATGGGCTATCG+GGG - chr1_1:47571311-47571330 None:intergenic 40.0%
CTTTGATAAGATCCCTTGCT+TGG - chr1_1:47571335-47571354 None:intergenic 40.0%
CAAGCAAGGGATCTTATCAA+AGG + chr1_1:47571333-47571352 Msa0024790:CDS 40.0%
TAAACAACATCCGTTCTTCG+AGG + chr1_1:47571413-47571432 Msa0024790:CDS 40.0%
AAACAACATCCGTTCTTCGA+GGG + chr1_1:47571414-47571433 Msa0024790:CDS 40.0%
TGGGATAGCACAACGTATTA+GGG - chr1_1:47571451-47571470 None:intergenic 40.0%
AACTCGAATTCACAAAGGTC+TGG - chr1_1:47571483-47571502 None:intergenic 40.0%
AGACCTTTGTGAATTCGAGT+TGG + chr1_1:47571482-47571501 Msa0024790:CDS 40.0%
! GACCTTTGTGAATTCGAGTT+GGG + chr1_1:47571483-47571502 Msa0024790:CDS 40.0%
TTAGAGTGTACAACAACAGG+TGG + chr1_1:47571552-47571571 Msa0024790:CDS 40.0%
! TTCTTCCTGTGGATTCGTTT+TGG + chr1_1:47571626-47571645 Msa0024790:three_prime_UTR 40.0%
! TCTTCCTGTGGATTCGTTTT+GGG + chr1_1:47571627-47571646 Msa0024790:three_prime_UTR 40.0%
TTATAAGGTGTAGGAGGTTC+AGG + chr1_1:47571734-47571753 Msa0024790:three_prime_UTR 40.0%
! TGTAGGAGGTTCAGGTTATA+TGG + chr1_1:47571742-47571761 Msa0024790:three_prime_UTR 40.0%
AACTGCCATGGAAATGCTGA+AGG - chr1_1:47566663-47566682 None:intergenic 45.0%
CAGCATTTCCATGGCAGTTT+AGG + chr1_1:47566664-47566683 Msa0024790:five_prime_UTR 45.0%
AGAGAAACCCTAAACTGCCA+TGG - chr1_1:47566675-47566694 None:intergenic 45.0%
CACCTGCTTCTTCTGTATTG+TGG + chr1_1:47566723-47566742 Msa0024790:five_prime_UTR 45.0%
TCCTTGTATCCCAGTTTCAG+CGG - chr1_1:47567894-47567913 None:intergenic 45.0%
AATGCCTGCTTCAAAGTCAC+CGG - chr1_1:47568083-47568102 None:intergenic 45.0%
CGGAAATGGCTGCTATGAAA+AGG + chr1_1:47568129-47568148 Msa0024790:CDS 45.0%
TCTCCAAGAATATCAGAGGC+CGG + chr1_1:47568170-47568189 Msa0024790:CDS 45.0%
ATTCGGTTGTCACTGATGCT+AGG + chr1_1:47568213-47568232 Msa0024790:CDS 45.0%
TCACTGATGCTAGGAGATCA+GGG + chr1_1:47568222-47568241 Msa0024790:CDS 45.0%
!! CCATTGGTGTTACAACAAGG+TGG - chr1_1:47568524-47568543 None:intergenic 45.0%
! CCACCTTGTTGTAACACCAA+TGG + chr1_1:47568521-47568540 Msa0024790:CDS 45.0%
GGGTAAGAAGAAACCAAAGC+AGG + chr1_1:47568727-47568746 Msa0024790:CDS 45.0%
CAAACAAGTGGAGTTGTAGC+AGG - chr1_1:47568809-47568828 None:intergenic 45.0%
! TTGTTACAACCAGTTGGTGC+TGG - chr1_1:47568923-47568942 None:intergenic 45.0%
CTGCTGTTGTTACAACCAGT+TGG - chr1_1:47568929-47568948 None:intergenic 45.0%
TACTACTGCTGTAGTCACCT+TGG - chr1_1:47569024-47569043 None:intergenic 45.0%
CAATAGGCCTCACATGTCAA+AGG + chr1_1:47569087-47569106 Msa0024790:CDS 45.0%
CTGCATTTGAGCATCTCGTA+TGG - chr1_1:47569128-47569147 None:intergenic 45.0%
ACGAAGGAAGAAGATGCCTA+GGG + chr1_1:47569285-47569304 Msa0024790:CDS 45.0%
!! CTTGTCATGGAGTATTGTCC+TGG + chr1_1:47569397-47569416 Msa0024790:CDS 45.0%
AGAACATGAAGATCTCCTCC+AGG - chr1_1:47569418-47569437 None:intergenic 45.0%
GTTCTACGTCAGAAACAGCT+TGG + chr1_1:47569433-47569452 Msa0024790:CDS 45.0%
!! GTTTTTCAGAACCAGCAGCA+AGG + chr1_1:47569461-47569480 Msa0024790:CDS 45.0%
CGCACTGTTGCAGATTGTAT+AGG + chr1_1:47569763-47569782 Msa0024790:intron 45.0%
! TTCAAGTGTGCTGAGTTGAG+GGG - chr1_1:47569810-47569829 None:intergenic 45.0%
ATCCACTCACTCTTTCTGGA+TGG + chr1_1:47569857-47569876 Msa0024790:intron 45.0%
ATCCATCCAGAAAGAGTGAG+TGG - chr1_1:47569862-47569881 None:intergenic 45.0%
TAAGTGTATGTCACCCGTAC+AGG - chr1_1:47569913-47569932 None:intergenic 45.0%
!! TTTAAGTGTGCGGACTAGAG+GGG - chr1_1:47570120-47570139 None:intergenic 45.0%
!! CTTTAAGTGTGCGGACTAGA+GGG - chr1_1:47570121-47570140 None:intergenic 45.0%
! CAATCCTCGCTTTAAGTGTG+CGG - chr1_1:47570130-47570149 None:intergenic 45.0%
GCACACTTAAAGCGAGGATT+GGG + chr1_1:47570129-47570148 Msa0024790:intron 45.0%
TGCAATGAAGACAGGCATAG+TGG + chr1_1:47570194-47570213 Msa0024790:intron 45.0%
CGCAGAGTTAGTCGCAATTA+AGG + chr1_1:47570236-47570255 Msa0024790:intron 45.0%
CCTGCATATACAAGGTTCTC+TGG - chr1_1:47570725-47570744 None:intergenic 45.0%
CCAGAGAACCTTGTATATGC+AGG + chr1_1:47570722-47570741 Msa0024790:intron 45.0%
! TTGGAGTACTTGCACATGCT+CGG + chr1_1:47570772-47570791 Msa0024790:CDS 45.0%
TAACGTCACACCTGAGTGAA+AGG - chr1_1:47570873-47570892 None:intergenic 45.0%
ATAGATCCTGCCAAGGTTTC+TGG + chr1_1:47570922-47570941 Msa0024790:CDS 45.0%
TGCACATGTACCAGAAACCT+TGG - chr1_1:47570935-47570954 None:intergenic 45.0%
AGTCCTAGATTCTTACCACC+TGG + chr1_1:47571012-47571031 Msa0024790:CDS 45.0%
GTCCTAGATTCTTACCACCT+GGG + chr1_1:47571013-47571032 Msa0024790:CDS 45.0%
TCCTAGATTCTTACCACCTG+GGG + chr1_1:47571014-47571033 Msa0024790:CDS 45.0%
CAGATCATTGCCACAACTTG+TGG + chr1_1:47571077-47571096 Msa0024790:CDS 45.0%
! TCCCTCTCCTTTGATGATCT+CGG - chr1_1:47571160-47571179 None:intergenic 45.0%
ATCATCAAAGGAGAGGGACA+TGG + chr1_1:47571162-47571181 Msa0024790:CDS 45.0%
!!! GCAGTTGATTGGTGGACTTT+TGG + chr1_1:47571189-47571208 Msa0024790:CDS 45.0%
AACAACATCCGTTCTTCGAG+GGG + chr1_1:47571415-47571434 Msa0024790:CDS 45.0%
CAATTAAGCCCCTCGAAGAA+CGG - chr1_1:47571426-47571445 None:intergenic 45.0%
GTTCTTCGAGGGGCTTAATT+GGG + chr1_1:47571425-47571444 Msa0024790:CDS 45.0%
GTGGGATAGCACAACGTATT+AGG - chr1_1:47571452-47571471 None:intergenic 45.0%
! AAAGGTCTGGAAGTTCTGGT+GGG - chr1_1:47571470-47571489 None:intergenic 45.0%
TCACAAAGGTCTGGAAGTTC+TGG - chr1_1:47571474-47571493 None:intergenic 45.0%
CTCCCAACTCGAATTCACAA+AGG - chr1_1:47571488-47571507 None:intergenic 45.0%
ATCGCACAGTCACAAAGCAA+GGG + chr1_1:47571519-47571538 Msa0024790:CDS 45.0%
TACAACAACAGGTGGACAAG+TGG + chr1_1:47571560-47571579 Msa0024790:CDS 45.0%
! GGAGTTTTCTCTGTCAACAG+TGG + chr1_1:47571601-47571620 Msa0024790:three_prime_UTR 45.0%
! CTTCCTGTGGATTCGTTTTG+GGG + chr1_1:47571628-47571647 Msa0024790:three_prime_UTR 45.0%
!!! TGGATTCGTTTTGGGGTCTA+TGG + chr1_1:47571635-47571654 Msa0024790:three_prime_UTR 45.0%
!!! GGATTCGTTTTGGGGTCTAT+GGG + chr1_1:47571636-47571655 Msa0024790:three_prime_UTR 45.0%
CGTGCTTTATAAGGTGTAGG+AGG + chr1_1:47571728-47571747 Msa0024790:three_prime_UTR 45.0%
! ATCTCCAATGGGCTCGTACT+CGG + chr1_1:47567758-47567777 Msa0024790:exon 50.0%
AAGCTTCCTCCGCTGAAACT+GGG + chr1_1:47567882-47567901 Msa0024790:CDS 50.0%
TTGTATCCCAGTTTCAGCGG+AGG - chr1_1:47567891-47567910 None:intergenic 50.0%
TCCGCTGAAACTGGGATACA+AGG + chr1_1:47567890-47567909 Msa0024790:CDS 50.0%
CGAGGTACACCCATTGTCAT+TGG - chr1_1:47568035-47568054 None:intergenic 50.0%
CTCAGAAATCCCAACTCGTG+GGG - chr1_1:47568060-47568079 None:intergenic 50.0%
GCTCAGAAATCCCAACTCGT+GGG - chr1_1:47568061-47568080 None:intergenic 50.0%
! ACGAGTTGGGATTTCTGAGC+CGG + chr1_1:47568061-47568080 Msa0024790:CDS 50.0%
CTCCAAGAATATCAGAGGCC+GGG + chr1_1:47568171-47568190 Msa0024790:CDS 50.0%
TTCCCGGCCTCTGATATTCT+TGG - chr1_1:47568176-47568195 None:intergenic 50.0%
GTCACTGATGCTAGGAGATC+AGG + chr1_1:47568221-47568240 Msa0024790:CDS 50.0%
AACTGAAATACCTCCGGTGC+TGG + chr1_1:47568277-47568296 Msa0024790:CDS 50.0%
! GACTTGCTTTCTTCCAGCAC+CGG - chr1_1:47568293-47568312 None:intergenic 50.0%
CTGGAAGAAAGCAAGTCGCT+TGG + chr1_1:47568296-47568315 Msa0024790:CDS 50.0%
! ATTTTACTGCTCGGGGACTG+TGG - chr1_1:47568685-47568704 None:intergenic 50.0%
CCAGAATCAGAACCCTGCTT+TGG - chr1_1:47568743-47568762 None:intergenic 50.0%
! CCAAAGCAGGGTTCTGATTC+TGG + chr1_1:47568740-47568759 Msa0024790:CDS 50.0%
TTTATTCCATCTGCAGGGCC+CGG - chr1_1:47568878-47568897 None:intergenic 50.0%
! AACTTGAAGAGCGTGCTCTC+TGG + chr1_1:47568896-47568915 Msa0024790:CDS 50.0%
! ACTTGAAGAGCGTGCTCTCT+GGG + chr1_1:47568897-47568916 Msa0024790:CDS 50.0%
ACTGACATTACTCTCGTCGC+TGG - chr1_1:47569053-47569072 None:intergenic 50.0%
AGCGACGAGAGTAATGTCAG+TGG + chr1_1:47569052-47569071 Msa0024790:CDS 50.0%
CGAGATGCTCAAATGCAGCA+TGG + chr1_1:47569130-47569149 Msa0024790:CDS 50.0%
CACGAAGGAAGAAGATGCCT+AGG + chr1_1:47569284-47569303 Msa0024790:CDS 50.0%
TGCCTAGGGCACAAACTGAA+AGG + chr1_1:47569299-47569318 Msa0024790:CDS 50.0%
GCCTAGGGCACAAACTGAAA+GGG + chr1_1:47569300-47569319 Msa0024790:CDS 50.0%
TCCCTTTCAGTTTGTGCCCT+AGG - chr1_1:47569304-47569323 None:intergenic 50.0%
!! GTCATGGAGTATTGTCCTGG+AGG + chr1_1:47569400-47569419 Msa0024790:CDS 50.0%
! TCAAGTGTGCTGAGTTGAGG+GGG - chr1_1:47569809-47569828 None:intergenic 50.0%
TTGCACACCAAATGCGTGGT+GGG - chr1_1:47570028-47570047 None:intergenic 50.0%
ATTGCACACCAAATGCGTGG+TGG - chr1_1:47570029-47570048 None:intergenic 50.0%
!! GCTTTAAGTGTGCGGACTAG+AGG - chr1_1:47570122-47570141 None:intergenic 50.0%
TAGTCCGCACACTTAAAGCG+AGG + chr1_1:47570123-47570142 Msa0024790:intron 50.0%
CGCACACTTAAAGCGAGGAT+TGG + chr1_1:47570128-47570147 Msa0024790:intron 50.0%
CTGCGGCTGCACTATGTTAT+TGG - chr1_1:47570221-47570240 None:intergenic 50.0%
TGCTGAAGTCCTTCTTGCGT+TGG + chr1_1:47570753-47570772 Msa0024790:CDS 50.0%
GCAAGTACTCCAACGCAAGA+AGG - chr1_1:47570765-47570784 None:intergenic 50.0%
CATGTACCAGAAACCTTGGC+AGG - chr1_1:47570931-47570950 None:intergenic 50.0%
!! AGTTTCCTTGCTTTTGCCCC+AGG - chr1_1:47571033-47571052 None:intergenic 50.0%
! CCCTCTCCTTTGATGATCTC+GGG - chr1_1:47571159-47571178 None:intergenic 50.0%
CCCGAGATCATCAAAGGAGA+GGG + chr1_1:47571156-47571175 Msa0024790:CDS 50.0%
GACATGGAGCTGCAGTTGAT+TGG + chr1_1:47571178-47571197 Msa0024790:CDS 50.0%
ATGGAGCTGCAGTTGATTGG+TGG + chr1_1:47571181-47571200 Msa0024790:CDS 50.0%
TAAAGAGCCTGAGAACCGAC+TGG + chr1_1:47571365-47571384 Msa0024790:CDS 50.0%
AAAGAGCCTGAGAACCGACT+GGG + chr1_1:47571366-47571385 Msa0024790:CDS 50.0%
AACCGACTGGGTACAGAGAA+AGG + chr1_1:47571378-47571397 Msa0024790:CDS 50.0%
ACCGACTGGGTACAGAGAAA+GGG + chr1_1:47571379-47571398 Msa0024790:CDS 50.0%
CGTTCTTCGAGGGGCTTAAT+TGG + chr1_1:47571424-47571443 Msa0024790:CDS 50.0%
! CAAAGGTCTGGAAGTTCTGG+TGG - chr1_1:47571471-47571490 None:intergenic 50.0%
GATCGCACAGTCACAAAGCA+AGG + chr1_1:47571518-47571537 Msa0024790:CDS 50.0%
CAACAGTGGCATTCTTCCTG+TGG + chr1_1:47571615-47571634 Msa0024790:three_prime_UTR 50.0%
AGACCCCAAAACGAATCCAC+AGG - chr1_1:47571634-47571653 None:intergenic 50.0%
CGACAAGGGCTAAATCGCAG+TGG - chr1_1:47567187-47567206 None:intergenic 55.0%
! TCTCCAATGGGCTCGTACTC+GGG + chr1_1:47567759-47567778 Msa0024790:exon 55.0%
GAAGCTTCCTCCGCTGAAAC+TGG + chr1_1:47567881-47567900 Msa0024790:CDS 55.0%
TACCTCGATCCCCACGAGTT+GGG + chr1_1:47568048-47568067 Msa0024790:CDS 55.0%
GGCTCAGAAATCCCAACTCG+TGG - chr1_1:47568062-47568081 None:intergenic 55.0%
!! TGAGCCGGTGACTTTGAAGC+AGG + chr1_1:47568076-47568095 Msa0024790:CDS 55.0%
! TTGCTTTCTTCCAGCACCGG+AGG - chr1_1:47568290-47568309 None:intergenic 55.0%
TTATGGGCCCACCACGCATT+TGG + chr1_1:47570018-47570037 Msa0024790:intron 55.0%
GCCCCAGGTGGTAAGAATCT+AGG - chr1_1:47571018-47571037 None:intergenic 55.0%
TACCACCTGGGGCAAAAGCA+AGG + chr1_1:47571025-47571044 Msa0024790:CDS 55.0%
!! TTCCTTGCTTTTGCCCCAGG+TGG - chr1_1:47571030-47571049 None:intergenic 55.0%
! CTTTGATGATCTCGGGCGCT+AGG - chr1_1:47571152-47571171 None:intergenic 55.0%
CTAGCGCCCGAGATCATCAA+AGG + chr1_1:47571150-47571169 Msa0024790:CDS 55.0%
GCCCGAGATCATCAAAGGAG+AGG + chr1_1:47571155-47571174 Msa0024790:CDS 55.0%
! TCTGTACCCAGTCGGTTCTC+AGG - chr1_1:47571375-47571394 None:intergenic 55.0%
CCCCTTTCTCTGTACCCAGT+CGG - chr1_1:47571383-47571402 None:intergenic 55.0%
CCGACTGGGTACAGAGAAAG+GGG + chr1_1:47571380-47571399 Msa0024790:CDS 55.0%
GCACAGTCACAAAGCAAGGG+TGG + chr1_1:47571522-47571541 Msa0024790:CDS 55.0%
GTTCCCGAGTACGAGCCCAT+TGG - chr1_1:47567765-47567784 None:intergenic 60.0%
GTACCTCGATCCCCACGAGT+TGG + chr1_1:47568047-47568066 Msa0024790:CDS 60.0%
ATCCCAACTCGTGGGGATCG+AGG - chr1_1:47568053-47568072 None:intergenic 60.0%
ATAACACCGGGCCCTGCAGA+TGG + chr1_1:47568869-47568888 Msa0024790:CDS 60.0%
! CGGACTAGAGGGGATGGGTT+TGG - chr1_1:47570110-47570129 None:intergenic 60.0%
!! GTGTGCGGACTAGAGGGGAT+GGG - chr1_1:47570115-47570134 None:intergenic 60.0%
!! AGTGTGCGGACTAGAGGGGA+TGG - chr1_1:47570116-47570135 None:intergenic 60.0%
GTGGGCTCTGCCACAAGTTG+TGG - chr1_1:47571090-47571109 None:intergenic 60.0%
CTCTCTGGGCCAGCACCAAC+TGG + chr1_1:47568911-47568930 Msa0024790:CDS 65.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 47566513 47571888 47566513 ID=Msa0024790;Name=Msa0024790
chr1_1 mRNA 47566513 47571888 47566513 ID=Msa0024790-mRNA-1;Parent=Msa0024790;Name=Msa0024790-mRNA-1;_AED=0.01;_eAED=0.01;_QI=492|1|1|1|0.5|0.33|3|289|857
chr1_1 exon 47566513 47566791 47566513 ID=Msa0024790-mRNA-1:exon:13528;Parent=Msa0024790-mRNA-1
chr1_1 exon 47567552 47569482 47567552 ID=Msa0024790-mRNA-1:exon:13529;Parent=Msa0024790-mRNA-1
chr1_1 exon 47570744 47571888 47570744 ID=Msa0024790-mRNA-1:exon:13530;Parent=Msa0024790-mRNA-1
chr1_1 five_prime_UTR 47566513 47566791 47566513 ID=Msa0024790-mRNA-1:five_prime_utr;Parent=Msa0024790-mRNA-1
chr1_1 five_prime_UTR 47567552 47567764 47567552 ID=Msa0024790-mRNA-1:five_prime_utr;Parent=Msa0024790-mRNA-1
chr1_1 CDS 47567765 47569482 47567765 ID=Msa0024790-mRNA-1:cds;Parent=Msa0024790-mRNA-1
chr1_1 CDS 47570744 47571599 47570744 ID=Msa0024790-mRNA-1:cds;Parent=Msa0024790-mRNA-1
chr1_1 three_prime_UTR 47571600 47571888 47571600 ID=Msa0024790-mRNA-1:three_prime_utr;Parent=Msa0024790-mRNA-1
Gene Sequence

>Msa0024790

ATGGGCTCGTACTCGGGAACTTGTGAAATTGTTGAAGTGAGGGATGACATTAGTACAGTGAAAGATGCAAGGATATATCTGTCCAGTTCAGGATATAGTGTAGCTGAGAAAAATCAGAAGCTTCCTCCGCTGAAACTGGGATACAAGGATAATCTAGATGATGATATTAATAAGCTGTTTGAAACAATTTCTCTGAGATCTTCGTCAAGGGATTTGAGCTATCTACCAGATGGAACAAGTCCAAAGTTGAAAAGCGCGTTAAAAAAGCCAATGACAATGGGTGTACCTCGATCCCCACGAGTTGGGATTTCTGAGCCGGTGACTTTGAAGCAGGCATTAAGAGACCTATGTATATCTAAGGCATCGGAAATGGCTGCTATGAAAAGGTTATCAAAGTCAGGAGCTTCTCCAAGAATATCAGAGGCCGGGAAGATACAGACATTGTACAATTCGGTTGTCACTGATGCTAGGAGATCAGGGCCTTCTAACGTTGACAGCAGTAAAAGGAGTTCAACTGAAATACCTCCGGTGCTGGAAGAAAGCAAGTCGCTTGGCTTGAATAAAGAATCACAGTCTCTTCAAACTTCCAAAAGTGTATTGAGCCAAAATGTTCAGTCTTCCGAAATTGCAGTTGCAGAAAATGAAACAGGGGCTTCATTGATGCGAAGTGATTTGGAATGTTCATCAAGTAAATTTGGGGTTTCATCCCAATCATTAGAACCCATTCAAATGGAAAAACAAATGTCTGCTTCTTCTCCACCTTGTTGTAACACCAATGGAAGTAAAGTAGAGTTGCCTGAAAAAGATTCTTCCCCTAAAAAATTAGGAAATAAAGCATCTACACGGAAAGGTATGTTGCAAACAACATCTTCCTCATCTACATCAATAAATGGCAATAGAGTGTGTAAACTTTCGCGCCACAGTCCCCGAGCAGTAAAATCGATCATAAAAAACAAGAGTTTGGGTAAGAAGAAACCAAAGCAGGGTTCTGATTCTGGTTTACATGTTCCTCAGTCAAATGAAGCAAATAACAAGTCAGTTCCTGCTACAACTCCACTTGTTTGCAAGAGATGTTGGTGTGAAATAGAAAATAGCAAAGGTAATATAACACCGGGCCCTGCAGATGGAATAAACTTGAAGAGCGTGCTCTCTGGGCCAGCACCAACTGGTTGTAACAACAGCAGAGAAGTTGCAAAAGTGAAAAAGAATGGCAGATTGAAAGAGCAGCTTGAATTTTCACAAAGTTCAAAGAGTAGCCAAGGTGACTACAGCAGTAGTACAAGTACCAGCGACGAGAGTAATGTCAGTGGTTCTAGTTTTGGCAATAGGCCTCACATGTCAAAGGATTTTAGATGGCAAGCCATACGAGATGCTCAAATGCAGCATGGAGTATTAGGCTTGAGAAACTTCAATCTTTTGAAGAAACTTGGTTGTGGAGACATTGGTACCGTATATCTTTCTGAACTAATTGGCCAAAATTGTTTGTTTGCTATTAAAGTAATGGACAATGAATTTTTGGCACGAAGGAAGAAGATGCCTAGGGCACAAACTGAAAGGGAAATATTACGAATGCTGGATCATCCTTTTCTTCCAACACTCTATGCACAGTTTACATCAGAAAATCTGTCATGTCTTGTCATGGAGTATTGTCCTGGAGGAGATCTTCATGTTCTACGTCAGAAACAGCTTGGTAGATGTTTTTCAGAACCAGCAGCAAGGTTTTACGTTGCTGAAGTCCTTCTTGCGTTGGAGTACTTGCACATGCTCGGAGTTGTTTACCGTGATTTGAAACCAGAGAACATTCTTGTTCGAGAAGACGGTCACATTATGCTCACTGATTTTGACCTTTCACTCAGGTGTGACGTTAGCCCGACACTTCTGAAATCATCTTCTGATATAGATCCTGCCAAGGTTTCTGGTACATGTGCAAAGTCAAGCTGCATTGAGCCATTCTGCATTGAACCATCTTGTCAAGTTGCATGCTTCAGTCCTAGATTCTTACCACCTGGGGCAAAAGCAAGGAAACTCAAAGCTGATCTTGCTGCTCATATCAGATCATTGCCACAACTTGTGGCAGAGCCCACAGATGCAAGATCAAACTCATTTGTTGGTACTCATGAATACCTAGCGCCCGAGATCATCAAAGGAGAGGGACATGGAGCTGCAGTTGATTGGTGGACTTTTGGTGTTTTTCTGTACGAGCTTTTATATGGTAGAACACCCTTCAAAGGTTCTAATAATGAAGAAACATTAGCCAATGTCGTGTTGCAAAATCTCAGATTCCCCGATAGCCCATTTGTTAGTTTCCAAGCAAGGGATCTTATCAAAGGGTTGTTAGTTAAAGAGCCTGAGAACCGACTGGGTACAGAGAAAGGGGCTGCAGAAATTAAACAACATCCGTTCTTCGAGGGGCTTAATTGGGCCCTAATACGTTGTGCTATCCCACCAGAACTTCCAGACCTTTGTGAATTCGAGTTGGGAGTTTCAGACATGATCGCACAGTCACAAAGCAAGGGTGGTAAATATTTAGAGTGTACAACAACAGGTGGACAAGTGGAATTTGAGTTGTTTTAG
Protein sequence

>Msa0024790

MGSYSGTCEIVEVRDDISTVKDARIYLSSSGYSVAEKNQKLPPLKLGYKDNLDDDINKLFETISLRSSSRDLSYLPDGTSPKLKSALKKPMTMGVPRSPRVGISEPVTLKQALRDLCISKASEMAAMKRLSKSGASPRISEAGKIQTLYNSVVTDARRSGPSNVDSSKRSSTEIPPVLEESKSLGLNKESQSLQTSKSVLSQNVQSSEIAVAENETGASLMRSDLECSSSKFGVSSQSLEPIQMEKQMSASSPPCCNTNGSKVELPEKDSSPKKLGNKASTRKGMLQTTSSSSTSINGNRVCKLSRHSPRAVKSIIKNKSLGKKKPKQGSDSGLHVPQSNEANNKSVPATTPLVCKRCWCEIENSKGNITPGPADGINLKSVLSGPAPTGCNNSREVAKVKKNGRLKEQLEFSQSSKSSQGDYSSSTSTSDESNVSGSSFGNRPHMSKDFRWQAIRDAQMQHGVLGLRNFNLLKKLGCGDIGTVYLSELIGQNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPFLPTLYAQFTSENLSCLVMEYCPGGDLHVLRQKQLGRCFSEPAARFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLTDFDLSLRCDVSPTLLKSSSDIDPAKVSGTCAKSSCIEPFCIEPSCQVACFSPRFLPPGAKARKLKADLAAHIRSLPQLVAEPTDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGVFLYELLYGRTPFKGSNNEETLANVVLQNLRFPDSPFVSFQARDLIKGLLVKEPENRLGTEKGAAEIKQHPFFEGLNWALIRCAIPPELPDLCEFELGVSDMIAQSQSKGGKYLECTTTGGQVEFELF*