Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0025150 | sp|Q9LSA9|PUMPK_ARATH | 53.906 | 256 | 113 | 2 | 255 | 508 | 78 | 330 | 1.17e-89 | 281 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|---|---|
| Msa0025150 | TF | Trihelix |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0025150 | MtrunA17_Chr1g0179531 | 99.805 | 512 | 1 | 0 | 1 | 512 | 1 | 512 | 0.0 | 1069 |
| Msa0025150 | MtrunA17_Chr8g0384081 | 50.758 | 264 | 120 | 3 | 252 | 508 | 56 | 316 | 2.28e-87 | 271 |
| Msa0025150 | MtrunA17_Chr2g0283871 | 35.644 | 101 | 59 | 3 | 133 | 228 | 23 | 122 | 1.20e-15 | 78.2 |
| Msa0025150 | MtrunA17_Chr4g0041151 | 36.275 | 102 | 58 | 3 | 133 | 228 | 31 | 131 | 1.30e-15 | 77.8 |
| Msa0025150 | MtrunA17_Chr1g0164461 | 41.346 | 104 | 51 | 4 | 121 | 221 | 27 | 123 | 1.57e-15 | 75.1 |
| Msa0025150 | MtrunA17_Chr6g0485241 | 37.255 | 102 | 61 | 2 | 131 | 230 | 128 | 228 | 2.24e-15 | 77.8 |
| Msa0025150 | MtrunA17_Chr3g0082261 | 41.346 | 104 | 51 | 4 | 121 | 221 | 27 | 123 | 1.75e-14 | 74.7 |
| Msa0025150 | MtrunA17_Chr5g0402321 | 34.000 | 100 | 60 | 2 | 133 | 226 | 22 | 121 | 1.49e-13 | 70.1 |
| Msa0025150 | MtrunA17_Chr4g0066271 | 38.000 | 100 | 58 | 2 | 133 | 228 | 117 | 216 | 3.74e-12 | 68.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0025150 | AT3G10030.1 | 56.364 | 550 | 187 | 7 | 1 | 509 | 1 | 538 | 0.0 | 591 |
| Msa0025150 | AT3G10030.2 | 55.086 | 521 | 181 | 7 | 1 | 480 | 1 | 509 | 0.0 | 542 |
| Msa0025150 | AT3G18680.1 | 53.906 | 256 | 113 | 2 | 255 | 508 | 78 | 330 | 1.18e-90 | 281 |
| Msa0025150 | AT3G18680.2 | 47.751 | 289 | 113 | 3 | 255 | 508 | 78 | 363 | 2.03e-83 | 263 |
| Msa0025150 | AT3G54390.2 | 36.441 | 118 | 65 | 3 | 127 | 242 | 48 | 157 | 3.57e-17 | 82.8 |
| Msa0025150 | AT3G54390.1 | 36.441 | 118 | 65 | 3 | 127 | 242 | 32 | 141 | 3.58e-17 | 82.8 |
| Msa0025150 | AT3G58630.1 | 30.872 | 149 | 78 | 3 | 133 | 256 | 26 | 174 | 2.82e-16 | 80.5 |
| Msa0025150 | AT3G58630.2 | 30.872 | 149 | 78 | 3 | 133 | 256 | 26 | 174 | 3.17e-16 | 80.1 |
| Msa0025150 | AT3G14180.1 | 37.607 | 117 | 66 | 4 | 112 | 224 | 63 | 176 | 6.38e-16 | 80.5 |
| Msa0025150 | AT3G24490.1 | 31.667 | 120 | 73 | 3 | 105 | 221 | 64 | 177 | 1.33e-12 | 69.3 |
| Msa0025150 | AT2G44730.1 | 38.043 | 92 | 53 | 2 | 133 | 220 | 64 | 155 | 2.58e-12 | 68.9 |
Find 174 sgRNAs with CRISPR-Local
Find 358 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGCATACGAAAACGGAATT+TGG | 0.135590 | 1_1:-48165106 | None:intergenic |
| GACCCCAGGACATGTTTATT+TGG | 0.173827 | 1_1:-48160473 | None:intergenic |
| AAAGGAAGAGTTGTTATATT+TGG | 0.225653 | 1_1:+48164175 | Msa0025150:CDS |
| TTGACAATGCTTTGGACTTC+AGG | 0.272821 | 1_1:-48162667 | None:intergenic |
| ATTAGTGGATCGGCACTTAC+TGG | 0.274531 | 1_1:+48162719 | Msa0025150:CDS |
| CAACAAATTCAATTATTGTT+AGG | 0.282934 | 1_1:+48165025 | Msa0025150:three_prime_UTR |
| CGACATATCTGCTGCTCTTC+GGG | 0.289993 | 1_1:+48164237 | Msa0025150:CDS |
| ATATTTGGTGGCATTGGTTT+TGG | 0.302206 | 1_1:+48164190 | Msa0025150:CDS |
| CGGTAAAATGCGAACAGATA+TGG | 0.313367 | 1_1:+48165251 | Msa0025150:three_prime_UTR |
| CTTTCGAGCACATATCCTTC+AGG | 0.327576 | 1_1:+48164473 | Msa0025150:CDS |
| GAACAACTCTCCGCCATCTA+AGG | 0.331588 | 1_1:-48162691 | None:intergenic |
| GGTGGTGAGGTGCGAAGGTT+TGG | 0.337687 | 1_1:-48160747 | None:intergenic |
| GGGTTTGAAGGAACGGCGTT+AGG | 0.354168 | 1_1:-48160616 | None:intergenic |
| ACCCCAGGACATGTTTATTT+GGG | 0.361054 | 1_1:-48160472 | None:intergenic |
| GAGAGTGGTGGTTGTGGTGG+TGG | 0.365463 | 1_1:-48160765 | None:intergenic |
| TGCGAGGAAAATGCCATTCC+TGG | 0.369901 | 1_1:+48164547 | Msa0025150:CDS |
| CCGACATATCTGCTGCTCTT+CGG | 0.371066 | 1_1:+48164236 | Msa0025150:CDS |
| TATTGTTGGGAATTCGCTTC+CGG | 0.371702 | 1_1:+48161323 | Msa0025150:CDS |
| CTTAGATTGCCTGGGTGAAA+TGG | 0.375148 | 1_1:-48161385 | None:intergenic |
| GTGGCAAGTATCCAACTTAA+TGG | 0.380113 | 1_1:-48165057 | None:intergenic |
| CGAAGGTTTGGTGGAGGTGG+TGG | 0.380551 | 1_1:-48160735 | None:intergenic |
| TCAATCAACTTTAGAGAAGA+TGG | 0.381962 | 1_1:+48164066 | Msa0025150:CDS |
| AACCTTAGGGTCAATATTGC+AGG | 0.385341 | 1_1:-48162750 | None:intergenic |
| GTCTAGAGGTGTCACCTCTA+TGG | 0.386263 | 1_1:+48164504 | Msa0025150:CDS |
| TCTAAGGTTTGACAATGCTT+TGG | 0.391295 | 1_1:-48162675 | None:intergenic |
| CCACCGTTGCCGCTAGAAAC+AGG | 0.392718 | 1_1:-48160994 | None:intergenic |
| TTTCTGCTAGTCATTGGCCT+TGG | 0.394011 | 1_1:+48161283 | Msa0025150:CDS |
| AGGTTTGGTGGAGGTGGTGG+TGG | 0.399667 | 1_1:-48160732 | None:intergenic |
| TAGCAGTAGCCTTCCTTTGT+CGG | 0.402109 | 1_1:+48165231 | Msa0025150:three_prime_UTR |
| GGAGGTGGTGGTGGTGAGAG+TGG | 0.404152 | 1_1:-48160723 | None:intergenic |
| AGCATACGAAAACGGAATTT+GGG | 0.404272 | 1_1:-48165105 | None:intergenic |
| GTTGCATTTCTGCTAGTCAT+TGG | 0.405063 | 1_1:+48161277 | Msa0025150:CDS |
| GGCACACTTATTGACCAAAC+TGG | 0.406605 | 1_1:+48164975 | Msa0025150:CDS |
| GTTTACTTGACCTCCACTGC+TGG | 0.412531 | 1_1:-48162642 | None:intergenic |
| GTTAGCTTATTGCTCCAGTT+TGG | 0.414252 | 1_1:-48164989 | None:intergenic |
| ATTAAACCTCTTAGATTGCC+TGG | 0.414921 | 1_1:-48161394 | None:intergenic |
| AAGCATTGTCAAACCTTAGA+TGG | 0.420124 | 1_1:+48162678 | Msa0025150:CDS |
| GGAAATTAGAACCATTAAGT+TGG | 0.422247 | 1_1:+48165046 | Msa0025150:three_prime_UTR |
| CTTCAGGTAGCAATTGTTGT+TGG | 0.428109 | 1_1:+48163057 | Msa0025150:intron |
| AAGCAGATGGAACATATTGT+TGG | 0.431908 | 1_1:+48161309 | Msa0025150:CDS |
| GGTGAGGTGCGAAGGTTTGG+TGG | 0.432109 | 1_1:-48160744 | None:intergenic |
| GTGCGAAGGTTTGGTGGAGG+TGG | 0.433564 | 1_1:-48160738 | None:intergenic |
| GTTGCAATAGCTTCCCGTCT+TGG | 0.434010 | 1_1:+48162942 | Msa0025150:CDS |
| GGAATCTAAGAGGAAGAGAT+TGG | 0.434366 | 1_1:+48161130 | Msa0025150:CDS |
| GGAAGAGTTGTTATATTTGG+TGG | 0.436188 | 1_1:+48164178 | Msa0025150:CDS |
| GGTGGTGAGAGTGGTGGTTG+TGG | 0.437072 | 1_1:-48160771 | None:intergenic |
| CTCAAAGGTACCAACGTAGA+TGG | 0.437085 | 1_1:+48164415 | Msa0025150:CDS |
| CGTTTGCTGAACCGTACAAT+AGG | 0.437374 | 1_1:+48164128 | Msa0025150:CDS |
| GTTGTTATATTTGGTGGCAT+TGG | 0.439242 | 1_1:+48164184 | Msa0025150:CDS |
| AGCAGATGGAACATATTGTT+GGG | 0.444247 | 1_1:+48161310 | Msa0025150:CDS |
| GACGGAGGTGGTGATGTGTT+TGG | 0.447470 | 1_1:-48160818 | None:intergenic |
| TGGCCCAAATAAACATGTCC+TGG | 0.450637 | 1_1:+48160469 | Msa0025150:five_prime_UTR |
| CTGCTCTGCAGTTAATGCTC+AGG | 0.451851 | 1_1:+48164387 | Msa0025150:intron |
| AGGTTGATAATTTGAAGAAA+AGG | 0.452877 | 1_1:+48161223 | Msa0025150:CDS |
| GATGTACTGCATACCAAGTT+GGG | 0.454334 | 1_1:+48163133 | Msa0025150:CDS |
| AGTTGGATACTTGCCACCAC+TGG | 0.455473 | 1_1:+48165063 | Msa0025150:three_prime_UTR |
| ATAGAAAAGATCGAGAAGAA+TGG | 0.456281 | 1_1:+48161043 | Msa0025150:CDS |
| TCTATACTCTGCTCCTACTC+CGG | 0.456827 | 1_1:-48161025 | None:intergenic |
| GTCGTCGTCGGCGACGGCGG+CGG | 0.456922 | 1_1:-48160842 | None:intergenic |
| CTTCTCCGCCGTTAATCTCA+TGG | 0.457893 | 1_1:+48160648 | Msa0025150:exon |
| TTTATCATCATCAGCAAACT+TGG | 0.459547 | 1_1:-48161346 | None:intergenic |
| CATCTACGTTGGTACCTTTG+AGG | 0.460201 | 1_1:-48164414 | None:intergenic |
| GGTGAGAGTGGTGGTTGTGG+TGG | 0.464473 | 1_1:-48160768 | None:intergenic |
| GAGAGACATAGAATGAATAA+TGG | 0.466819 | 1_1:+48161255 | Msa0025150:CDS |
| GTGGTGGTGGTGAGGTGCGA+AGG | 0.467732 | 1_1:-48160752 | None:intergenic |
| TGTGATGCAACGACGTCGTA+TGG | 0.469790 | 1_1:+48160949 | Msa0025150:CDS |
| TCCTTTCTCAAGATGCCTGA+TGG | 0.470108 | 1_1:-48164158 | None:intergenic |
| GTCGGCGACGGCGGCGGAGA+CGG | 0.470366 | 1_1:-48160836 | None:intergenic |
| ACAATAGGCAACGGGCCATC+AGG | 0.470864 | 1_1:+48164143 | Msa0025150:CDS |
| ACGGCGGAGAAGACGGTGAA+AGG | 0.471614 | 1_1:-48160637 | None:intergenic |
| TTGGCCTTGGTTTAAGCAGA+TGG | 0.477301 | 1_1:+48161296 | Msa0025150:CDS |
| CGGCGGAGAAGACGGTGAAA+GGG | 0.479455 | 1_1:-48160636 | None:intergenic |
| GTCTCCGTCGTCGTCGGCGA+CGG | 0.482206 | 1_1:-48160848 | None:intergenic |
| GAGATTAACGGCGGAGAAGA+CGG | 0.487166 | 1_1:-48160644 | None:intergenic |
| GTGATTAACCTTACCCAACT+TGG | 0.488217 | 1_1:-48163146 | None:intergenic |
| CAGGTAGCAATTGTTGTTGG+AGG | 0.488440 | 1_1:+48163060 | Msa0025150:intron |
| GAATCTAAGAGGAAGAGATT+GGG | 0.489819 | 1_1:+48161131 | Msa0025150:CDS |
| TGGAGAAGTGGTGGTGAGAG+TGG | 0.496490 | 1_1:-48160780 | None:intergenic |
| ATTTCTTCTGTGGAGATGCA+TGG | 0.497325 | 1_1:+48163088 | Msa0025150:CDS |
| TGCTGCTCTTCGGGCTTCAG+AGG | 0.502112 | 1_1:+48164246 | Msa0025150:CDS |
| TTGGGAAGAAGTAGCTTCAA+TGG | 0.503405 | 1_1:+48161149 | Msa0025150:CDS |
| TTTCGAGCACATATCCTTCA+GGG | 0.508101 | 1_1:+48164474 | Msa0025150:CDS |
| GGCCCAAATAAACATGTCCT+GGG | 0.510405 | 1_1:+48160470 | Msa0025150:five_prime_UTR |
| GACGGCGGCGGAGACGGAGG+TGG | 0.510775 | 1_1:-48160830 | None:intergenic |
| TAAAGTTGATTGAAGCAGTA+AGG | 0.510796 | 1_1:-48164056 | None:intergenic |
| TGGTGGTTGTGGTGGTGGTG+AGG | 0.511118 | 1_1:-48160760 | None:intergenic |
| TCTTAAATTTGTCAGCATGA+TGG | 0.513943 | 1_1:+48164018 | Msa0025150:intron |
| ATAGTATTGCTTACCAGGAA+TGG | 0.515872 | 1_1:-48164560 | None:intergenic |
| TTTCACCCAGGCAATCTAAG+AGG | 0.517069 | 1_1:+48161388 | Msa0025150:CDS |
| CGTTAGGGAAAGAGAGAAGA+AGG | 0.517486 | 1_1:-48160600 | None:intergenic |
| GATGCATGGGTAACTGCAAC+TGG | 0.517940 | 1_1:+48163102 | Msa0025150:CDS |
| GGTTTGAAGGAACGGCGTTA+GGG | 0.520358 | 1_1:-48160615 | None:intergenic |
| ACAACATAAGCATACGAAAA+CGG | 0.521147 | 1_1:-48165113 | None:intergenic |
| GCCATCAGGCATCTTGAGAA+AGG | 0.521422 | 1_1:+48164157 | Msa0025150:CDS |
| GGTGGTGGTGGTGAGAGTGG+TGG | 0.521909 | 1_1:-48160720 | None:intergenic |
| CTGTACCTCCACACCAAGAC+GGG | 0.522588 | 1_1:-48162955 | None:intergenic |
| GCAAGAAGCCATGAGATTAA+CGG | 0.522956 | 1_1:-48160656 | None:intergenic |
| GTTTCTAGCGGCAACGGTGG+AGG | 0.523855 | 1_1:+48160997 | Msa0025150:CDS |
| TTATTACCACGTAGGAGAGA+TGG | 0.526353 | 1_1:-48160498 | None:intergenic |
| ATGGCCCGTTGCCTATTGTA+CGG | 0.527865 | 1_1:-48164139 | None:intergenic |
| AGCTTCCCGTCTTGGTGTGG+AGG | 0.534343 | 1_1:+48162950 | Msa0025150:CDS |
| TCCGTCGTCGTCGGCGACGG+CGG | 0.535708 | 1_1:-48160845 | None:intergenic |
| TTAAACCTCTTAGATTGCCT+GGG | 0.536780 | 1_1:-48161393 | None:intergenic |
| AGATGTACTGCATACCAAGT+TGG | 0.537226 | 1_1:+48163132 | Msa0025150:CDS |
| AACATTTCAAAAGCTTTGTG+TGG | 0.537883 | 1_1:+48164942 | Msa0025150:CDS |
| TCATCATCAGCAAACTTGGC+CGG | 0.538573 | 1_1:-48161342 | None:intergenic |
| TACCTGCAATATTGACCCTA+AGG | 0.540236 | 1_1:+48162748 | Msa0025150:CDS |
| TTTCTTCTGTGGAGATGCAT+GGG | 0.540958 | 1_1:+48163089 | Msa0025150:CDS |
| GGAGGTCGTAATTTCTTCTG+TGG | 0.542254 | 1_1:+48163078 | Msa0025150:CDS |
| CTACCAGCGTCATCGTCGAA+TGG | 0.542605 | 1_1:-48160892 | None:intergenic |
| CAATCAACTTTAGAGAAGAT+GGG | 0.544338 | 1_1:+48164067 | Msa0025150:CDS |
| AAGACGGTGAAAGGGTTTGA+AGG | 0.545461 | 1_1:-48160628 | None:intergenic |
| AGGGTCAATATTGCAGGTAT+CGG | 0.548147 | 1_1:-48162744 | None:intergenic |
| AGGTGGTGATGTGTTTGGAT+TGG | 0.554894 | 1_1:-48160813 | None:intergenic |
| TGCCTGGGTGAAATGGAAGC+AGG | 0.556747 | 1_1:-48161378 | None:intergenic |
| CTGAATCGAGGGAATCTAAG+AGG | 0.560567 | 1_1:+48161120 | Msa0025150:CDS |
| AAACCTGTTTCTAGCGGCAA+CGG | 0.561702 | 1_1:+48160991 | Msa0025150:CDS |
| TGAACCGTACAATAGGCAAC+GGG | 0.562366 | 1_1:+48164135 | Msa0025150:CDS |
| GATATGTCGGTTGAGAAAAG+TGG | 0.562539 | 1_1:-48164223 | None:intergenic |
| GGCGACGGCGGCGGAGACGG+AGG | 0.562987 | 1_1:-48160833 | None:intergenic |
| AATGCTCAGGCTGTCCTCAA+AGG | 0.568956 | 1_1:+48164400 | Msa0025150:CDS |
| GCTGCTCTTCGGGCTTCAGA+GGG | 0.570088 | 1_1:+48164247 | Msa0025150:CDS |
| GGCAACGGTGGAGGAAGCGC+CGG | 0.572056 | 1_1:+48161006 | Msa0025150:CDS |
| GCTCTACAATTTCCCAGTGG+TGG | 0.572078 | 1_1:-48165076 | None:intergenic |
| CGTATGGATTCAACAACAAA+CGG | 0.572327 | 1_1:+48160965 | Msa0025150:CDS |
| GTTGGATACTTGCCACCACT+GGG | 0.572627 | 1_1:+48165064 | Msa0025150:three_prime_UTR |
| ACAAACTTCAGTTTCAATGC+AGG | 0.580585 | 1_1:+48164105 | Msa0025150:CDS |
| GGTGGAGGAAGCGCCGGAGT+AGG | 0.580586 | 1_1:+48161012 | Msa0025150:CDS |
| CCTGTTTCTAGCGGCAACGG+TGG | 0.581238 | 1_1:+48160994 | Msa0025150:CDS |
| GGTGAAAGGGTTTGAAGGAA+CGG | 0.581304 | 1_1:-48160623 | None:intergenic |
| GGTGTCGTCTCCGTCGTCGT+CGG | 0.581790 | 1_1:-48160854 | None:intergenic |
| GTCATATACGCCATCTACGT+TGG | 0.587713 | 1_1:-48164425 | None:intergenic |
| AACTTCATTTGAAACTAACA+TGG | 0.588078 | 1_1:-48162922 | None:intergenic |
| GCCGCCGTCGCCGACGACGA+CGG | 0.592641 | 1_1:+48160844 | Msa0025150:CDS |
| GTGGCTACGTCCAGCAGTGG+AGG | 0.596879 | 1_1:+48162632 | Msa0025150:CDS |
| TAGGAGAGATGGAGGACCCC+AGG | 0.598322 | 1_1:-48160487 | None:intergenic |
| AATCCATTCGACGATGACGC+TGG | 0.603457 | 1_1:+48160889 | Msa0025150:CDS |
| GAGGTGCGAAGGTTTGGTGG+AGG | 0.605729 | 1_1:-48160741 | None:intergenic |
| TTCAGGGAGCTAGTGTCTAG+AGG | 0.610453 | 1_1:+48164490 | Msa0025150:CDS |
| CAGGGCTGACATATCCATAG+AGG | 0.610631 | 1_1:-48164518 | None:intergenic |
| CTGAACCGTACAATAGGCAA+CGG | 0.610750 | 1_1:+48164134 | Msa0025150:CDS |
| AATAGCTTCCCGTCTTGGTG+TGG | 0.611957 | 1_1:+48162947 | Msa0025150:CDS |
| TGAGAATCAATCGAAGAGTG+TGG | 0.613705 | 1_1:+48161185 | Msa0025150:CDS |
| AGAAGTGGTGGTGAGAGTGG+TGG | 0.614183 | 1_1:-48160777 | None:intergenic |
| TGTTCCATCTGCTTAAACCA+AGG | 0.614998 | 1_1:-48161300 | None:intergenic |
| GGAGACGACACCGATGACTA+CGG | 0.620045 | 1_1:+48160865 | Msa0025150:CDS |
| GGAGTGGCTACGTCCAGCAG+TGG | 0.623352 | 1_1:+48162629 | Msa0025150:CDS |
| GAATGGATTACCGTAGTCAT+CGG | 0.625254 | 1_1:-48160875 | None:intergenic |
| AATTTACTCAGCTGAATCGA+GGG | 0.625957 | 1_1:+48161109 | Msa0025150:CDS |
| AAATTTACTCAGCTGAATCG+AGG | 0.626415 | 1_1:+48161108 | Msa0025150:CDS |
| CCGAAGAGCAGCAGATATGT+CGG | 0.627184 | 1_1:-48164236 | None:intergenic |
| GGACTGAAGCTGTGGAGAAG+TGG | 0.627526 | 1_1:-48160792 | None:intergenic |
| TCTAGACACTAGCTCCCTGA+AGG | 0.629448 | 1_1:-48164488 | None:intergenic |
| TTCCTGCTTCCATTTCACCC+AGG | 0.634674 | 1_1:+48161376 | Msa0025150:CDS |
| ACTGTACCTCCACACCAAGA+CGG | 0.637094 | 1_1:-48162956 | None:intergenic |
| TTTGGATTGGACTGAAGCTG+TGG | 0.637149 | 1_1:-48160800 | None:intergenic |
| CATCTGTGAATAATTTACAG+AGG | 0.639365 | 1_1:-48165187 | None:intergenic |
| TGCTTATGTTGTTTACGTGG+TGG | 0.643523 | 1_1:+48165124 | Msa0025150:three_prime_UTR |
| GCTTTGTGTGGAGAACAAGT+TGG | 0.647871 | 1_1:+48164954 | Msa0025150:CDS |
| CTGAAGCTGTGGAGAAGTGG+TGG | 0.656134 | 1_1:-48160789 | None:intergenic |
| CGGTCAAAACCTGTTTCTAG+CGG | 0.659483 | 1_1:+48160985 | Msa0025150:CDS |
| TGCTTTATTTATTACCACGT+AGG | 0.660728 | 1_1:-48160506 | None:intergenic |
| GGTGGTTGTTATCGTCGTGG+AGG | 0.671957 | 1_1:-48160702 | None:intergenic |
| TTACCACGTAGGAGAGATGG+AGG | 0.676577 | 1_1:-48160495 | None:intergenic |
| GTATGCTTATGTTGTTTACG+TGG | 0.678478 | 1_1:+48165121 | Msa0025150:three_prime_UTR |
| CATTGTCAAACCTTAGATGG+CGG | 0.680970 | 1_1:+48162681 | Msa0025150:CDS |
| TGTGGAACAGTGTAAGAACA+AGG | 0.689866 | 1_1:+48161203 | Msa0025150:CDS |
| AGTGGTGGTTGTTATCGTCG+TGG | 0.691782 | 1_1:-48160705 | None:intergenic |
| GCCCAAATAAACATGTCCTG+GGG | 0.697829 | 1_1:+48160471 | Msa0025150:five_prime_UTR |
| GAAGATGTATGATAACGTTG+TGG | 0.703343 | 1_1:-48160576 | None:intergenic |
| GTCAGCCCTGACATTCTGCG+AGG | 0.718203 | 1_1:+48164531 | Msa0025150:CDS |
| AGAAGCCATGAGATTAACGG+CGG | 0.721002 | 1_1:-48160653 | None:intergenic |
| GGTCCTCCATCTCTCCTACG+TGG | 0.737509 | 1_1:+48160492 | Msa0025150:five_prime_UTR |
| TCAGCTCTACAATTTCCCAG+TGG | 0.739386 | 1_1:-48165079 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATTAGAAAATTATATAGAA+AGG | - | chr1_1:48164284-48164303 | None:intergenic | 10.0% |
| !!! | ATTTTACAGAAATATAATAA+AGG | - | chr1_1:48165155-48165174 | None:intergenic | 10.0% |
| !!! | ATACGTTTAGATTTTATTTT+AGG | + | chr1_1:48161507-48161526 | Msa0025150:intron | 15.0% |
| !!! | TACGTTTAGATTTTATTTTA+GGG | + | chr1_1:48161508-48161527 | Msa0025150:intron | 15.0% |
| !!! | AAACTTAAAATTTTCAGATT+CGG | - | chr1_1:48161574-48161593 | None:intergenic | 15.0% |
| !!! | GAAAATTTTAAGTTTTGTTT+AGG | + | chr1_1:48161579-48161598 | Msa0025150:intron | 15.0% |
| !! | TGTGTTTACTTTATTAATTA+TGG | + | chr1_1:48161803-48161822 | Msa0025150:intron | 15.0% |
| !! | TTCAATGTTTATTCTATTTA+TGG | + | chr1_1:48163175-48163194 | Msa0025150:intron | 15.0% |
| !!! | CTCATTTTAAAAAAGAAAAT+TGG | + | chr1_1:48163470-48163489 | Msa0025150:intron | 15.0% |
| !! | TAAAGATTAAAAAGATCTTA+TGG | - | chr1_1:48163929-48163948 | None:intergenic | 15.0% |
| !!! | TAAGATCTTTTTAATCTTTA+TGG | + | chr1_1:48163929-48163948 | Msa0025150:intron | 15.0% |
| !!! | TTTAGATTTTATTTTAGGGT+AGG | + | chr1_1:48161512-48161531 | Msa0025150:intron | 20.0% |
| !!! | TTTGCTGTTTTTGTTTTAAT+TGG | + | chr1_1:48161611-48161630 | Msa0025150:intron | 20.0% |
| !!! | ACTTTATTTTGAACTTGATT+TGG | + | chr1_1:48162092-48162111 | Msa0025150:intron | 20.0% |
| !! | ATGCGATATTAGTAAAAATA+CGG | - | chr1_1:48162275-48162294 | None:intergenic | 20.0% |
| !!! | TAATTTGTGAACTTGAAATA+TGG | - | chr1_1:48162418-48162437 | None:intergenic | 20.0% |
| !! | ATATTACAAGAATAAGAACA+GGG | - | chr1_1:48162570-48162589 | None:intergenic | 20.0% |
| !! | AATATTACAAGAATAAGAAC+AGG | - | chr1_1:48162571-48162590 | None:intergenic | 20.0% |
| !! | AATAAATTTAAGCAAGCAAA+TGG | - | chr1_1:48162893-48162912 | None:intergenic | 20.0% |
| !!! | TTCATGTATTTTCTTTTTGA+TGG | - | chr1_1:48163222-48163241 | None:intergenic | 20.0% |
| !!! | TTCTTTTTTAAAATGAGATG+AGG | - | chr1_1:48163467-48163486 | None:intergenic | 20.0% |
| !!! | AATTGGAAATTTGAACTTTT+AGG | + | chr1_1:48163487-48163506 | Msa0025150:intron | 20.0% |
| !!! | TATATTATTTCTTTTCCAAC+TGG | + | chr1_1:48163574-48163593 | Msa0025150:intron | 20.0% |
| !!! | TTACGACAATGATTTATTTT+TGG | + | chr1_1:48163728-48163747 | Msa0025150:intron | 20.0% |
| !!! | TGCTAGTATTTTCTTTTATA+TGG | + | chr1_1:48164770-48164789 | Msa0025150:intron | 20.0% |
| !!! | AGTTGTAGTTTTTAATCTAT+TGG | + | chr1_1:48164911-48164930 | Msa0025150:intron | 20.0% |
| !! | CAACAAATTCAATTATTGTT+AGG | + | chr1_1:48165025-48165044 | Msa0025150:three_prime_UTR | 20.0% |
| !!! | AGGTTGATAATTTGAAGAAA+AGG | + | chr1_1:48161223-48161242 | Msa0025150:CDS | 25.0% |
| ! | TTGATTTATTTGTATGCTTG+TGG | + | chr1_1:48161432-48161451 | Msa0025150:intron | 25.0% |
| !!! | ATTTTAGGGTAGGTTTTTTT+TGG | + | chr1_1:48161522-48161541 | Msa0025150:intron | 25.0% |
| ! | ATTGATGTGCTAAAAAAACA+AGG | + | chr1_1:48161667-48161686 | Msa0025150:intron | 25.0% |
| ! | TTGATGTGCTAAAAAAACAA+GGG | + | chr1_1:48161668-48161687 | Msa0025150:intron | 25.0% |
| ! | ATCTAATTGAATAACGAACA+AGG | - | chr1_1:48161906-48161925 | None:intergenic | 25.0% |
| !! | CTTTTTACTTGACATGTTTA+AGG | + | chr1_1:48161962-48161981 | Msa0025150:intron | 25.0% |
| !! | TTTTGATATGTTAGCAAGTT+TGG | + | chr1_1:48162026-48162045 | Msa0025150:intron | 25.0% |
| ! | TTTGATATGTTAGCAAGTTT+GGG | + | chr1_1:48162027-48162046 | Msa0025150:intron | 25.0% |
| !!! | TTTCAAGTTCACAAATTACA+TGG | + | chr1_1:48162420-48162439 | Msa0025150:intron | 25.0% |
| !! | TTCAAGTTCACAAATTACAT+GGG | + | chr1_1:48162421-48162440 | Msa0025150:intron | 25.0% |
| ! | GAATGACATTCAAACTATAA+TGG | - | chr1_1:48162532-48162551 | None:intergenic | 25.0% |
| ! | CATATCTAAAAATAAAGGAG+GGG | - | chr1_1:48162610-48162629 | None:intergenic | 25.0% |
| ! | CCATATCTAAAAATAAAGGA+GGG | - | chr1_1:48162611-48162630 | None:intergenic | 25.0% |
| ! | TCCATATCTAAAAATAAAGG+AGG | - | chr1_1:48162612-48162631 | None:intergenic | 25.0% |
| ! | CACTCCATATCTAAAAATAA+AGG | - | chr1_1:48162615-48162634 | None:intergenic | 25.0% |
| !!! | CTTTATTTTTAGATATGGAG+TGG | + | chr1_1:48162613-48162632 | Msa0025150:intron | 25.0% |
| !!! | AGAGTTGTTCTAAAAATTAG+TGG | + | chr1_1:48162704-48162723 | Msa0025150:CDS | 25.0% |
| !!! | TGTTCTAAAAATTAGTGGAT+CGG | + | chr1_1:48162709-48162728 | Msa0025150:CDS | 25.0% |
| !! | CTGCAACTATATTTCATTTT+AGG | - | chr1_1:48162788-48162807 | None:intergenic | 25.0% |
| !! | AACTTCATTTGAAACTAACA+TGG | - | chr1_1:48162925-48162944 | None:intergenic | 25.0% |
| ! | ATTTGTAATCAGGATATTCA+TGG | - | chr1_1:48163264-48163283 | None:intergenic | 25.0% |
| ! | ATGAATATCCTGATTACAAA+TGG | + | chr1_1:48163263-48163282 | Msa0025150:intron | 25.0% |
| !!! | GAAATTTGAACTTTTAGGTA+GGG | + | chr1_1:48163492-48163511 | Msa0025150:intron | 25.0% |
| ! | CAAGCATCAAAAATTCATTT+AGG | - | chr1_1:48163805-48163824 | None:intergenic | 25.0% |
| !! | TTTTGATGCTTGAACTTTAT+TGG | + | chr1_1:48163813-48163832 | Msa0025150:intron | 25.0% |
| ! | AAAGGAAGAGTTGTTATATT+TGG | + | chr1_1:48164175-48164194 | Msa0025150:CDS | 25.0% |
| ! | TAGATATTTAAATATGCGAC+AGG | - | chr1_1:48164700-48164719 | None:intergenic | 25.0% |
| ! | TGTCGCATATTTAAATATCT+AGG | + | chr1_1:48164699-48164718 | Msa0025150:intron | 25.0% |
| ! | CTAAGCACTACAAAAATTTA+TGG | - | chr1_1:48164735-48164754 | None:intergenic | 25.0% |
| ! | CAGTTTATGAAAATAACCTT+GGG | - | chr1_1:48164808-48164827 | None:intergenic | 25.0% |
| ! | TCAGTTTATGAAAATAACCT+TGG | - | chr1_1:48164809-48164828 | None:intergenic | 25.0% |
| !! | TGCTTTATTTATTACCACGT+AGG | - | chr1_1:48160509-48160528 | None:intergenic | 30.0% |
| ATAGAAAAGATCGAGAAGAA+TGG | + | chr1_1:48161043-48161062 | Msa0025150:CDS | 30.0% | |
| GAGAGACATAGAATGAATAA+TGG | + | chr1_1:48161255-48161274 | Msa0025150:CDS | 30.0% | |
| TTTATCATCATCAGCAAACT+TGG | - | chr1_1:48161349-48161368 | None:intergenic | 30.0% | |
| TTATTTGTATGCTTGTGGAT+TGG | + | chr1_1:48161437-48161456 | Msa0025150:intron | 30.0% | |
| AAAGTAAACACATAAGTCCT+GGG | - | chr1_1:48161795-48161814 | None:intergenic | 30.0% | |
| TAAAGTAAACACATAAGTCC+TGG | - | chr1_1:48161796-48161815 | None:intergenic | 30.0% | |
| TTTACTTGACATGTTTAAGG+TGG | + | chr1_1:48161965-48161984 | Msa0025150:intron | 30.0% | |
| ATAGTTGTATGTTGAGTGTT+TGG | + | chr1_1:48162054-48162073 | Msa0025150:intron | 30.0% | |
| TAGTTGTATGTTGAGTGTTT+GGG | + | chr1_1:48162055-48162074 | Msa0025150:intron | 30.0% | |
| ACTTCTACTTAAACAAAGCT+TGG | + | chr1_1:48162213-48162232 | Msa0025150:intron | 30.0% | |
| CAAAATCAACTTTGTATGAC+AGG | + | chr1_1:48162239-48162258 | Msa0025150:intron | 30.0% | |
| ! | CACTAGGATTTGAAACTATA+TGG | + | chr1_1:48162342-48162361 | Msa0025150:intron | 30.0% |
| CAAATTGGAATTAAGAGCTT+AGG | - | chr1_1:48162449-48162468 | None:intergenic | 30.0% | |
| TTGATTGTGTTGTCATTGTT+TGG | + | chr1_1:48162505-48162524 | Msa0025150:intron | 30.0% | |
| !!! | CCCTCCTTTATTTTTAGATA+TGG | + | chr1_1:48162608-48162627 | Msa0025150:intron | 30.0% |
| AATGAAATATAGTTGCAGTC+TGG | + | chr1_1:48162790-48162809 | Msa0025150:intron | 30.0% | |
| GTCTGGTTGTATTATATATG+TGG | + | chr1_1:48162807-48162826 | Msa0025150:intron | 30.0% | |
| GCTTGCTTAAATTTATTGTC+AGG | + | chr1_1:48162896-48162915 | Msa0025150:intron | 30.0% | |
| TGCTTAAATTTATTGTCAGG+TGG | + | chr1_1:48162899-48162918 | Msa0025150:intron | 30.0% | |
| TTCTTTCTTTGTGATACTTC+AGG | + | chr1_1:48163041-48163060 | Msa0025150:intron | 30.0% | |
| !! | GGAAATTTGAACTTTTAGGT+AGG | + | chr1_1:48163491-48163510 | Msa0025150:intron | 30.0% |
| TTCAATATGCTGCAAAACAA+AGG | - | chr1_1:48163661-48163680 | None:intergenic | 30.0% | |
| ! | ATATGAGATCAGTGTTTTCA+TGG | + | chr1_1:48163866-48163885 | Msa0025150:intron | 30.0% |
| TCTTAAATTTGTCAGCATGA+TGG | + | chr1_1:48164018-48164037 | Msa0025150:intron | 30.0% | |
| ! | TAAAGTTGATTGAAGCAGTA+AGG | - | chr1_1:48164059-48164078 | None:intergenic | 30.0% |
| ! | TCAATCAACTTTAGAGAAGA+TGG | + | chr1_1:48164066-48164085 | Msa0025150:CDS | 30.0% |
| ! | CAATCAACTTTAGAGAAGAT+GGG | + | chr1_1:48164067-48164086 | Msa0025150:CDS | 30.0% |
| ! | ATCAACCACATGGATATTTT+TGG | + | chr1_1:48164341-48164360 | Msa0025150:intron | 30.0% |
| !! | TATTGCATCTGGTCTTTTTA+TGG | + | chr1_1:48164580-48164599 | Msa0025150:intron | 30.0% |
| !! | ATTGCATCTGGTCTTTTTAT+GGG | + | chr1_1:48164581-48164600 | Msa0025150:intron | 30.0% |
| TTATGAATAGTCTGCTTCAT+TGG | - | chr1_1:48164853-48164872 | None:intergenic | 30.0% | |
| ! | AACATTTCAAAAGCTTTGTG+TGG | + | chr1_1:48164942-48164961 | Msa0025150:CDS | 30.0% |
| GGAAATTAGAACCATTAAGT+TGG | + | chr1_1:48165046-48165065 | Msa0025150:three_prime_UTR | 30.0% | |
| ACAACATAAGCATACGAAAA+CGG | - | chr1_1:48165116-48165135 | None:intergenic | 30.0% | |
| CATCTGTGAATAATTTACAG+AGG | - | chr1_1:48165190-48165209 | None:intergenic | 30.0% | |
| ! | GAAGATGTATGATAACGTTG+TGG | - | chr1_1:48160579-48160598 | None:intergenic | 35.0% |
| CGTATGGATTCAACAACAAA+CGG | + | chr1_1:48160965-48160984 | Msa0025150:CDS | 35.0% | |
| AAATTTACTCAGCTGAATCG+AGG | + | chr1_1:48161108-48161127 | Msa0025150:CDS | 35.0% | |
| AATTTACTCAGCTGAATCGA+GGG | + | chr1_1:48161109-48161128 | Msa0025150:CDS | 35.0% | |
| GAATCTAAGAGGAAGAGATT+GGG | + | chr1_1:48161131-48161150 | Msa0025150:CDS | 35.0% | |
| AAGCAGATGGAACATATTGT+TGG | + | chr1_1:48161309-48161328 | Msa0025150:CDS | 35.0% | |
| AGCAGATGGAACATATTGTT+GGG | + | chr1_1:48161310-48161329 | Msa0025150:CDS | 35.0% | |
| TTAAACCTCTTAGATTGCCT+GGG | - | chr1_1:48161396-48161415 | None:intergenic | 35.0% | |
| ATTAAACCTCTTAGATTGCC+TGG | - | chr1_1:48161397-48161416 | None:intergenic | 35.0% | |
| AAAACAACACACGACAAACA+CGG | - | chr1_1:48161714-48161733 | None:intergenic | 35.0% | |
| GTGTGTATATTTCTTCTCTG+TGG | - | chr1_1:48161862-48161881 | None:intergenic | 35.0% | |
| TGTAGAATCTTAGCATTGCA+TGG | + | chr1_1:48161995-48162014 | Msa0025150:intron | 35.0% | |
| TGAAGTGAGTGATTGATGTT+TGG | + | chr1_1:48162128-48162147 | Msa0025150:intron | 35.0% | |
| GAAGTGAGTGATTGATGTTT+GGG | + | chr1_1:48162129-48162148 | Msa0025150:intron | 35.0% | |
| ! | GTTTACTTTGAAAGCAAGCT+TGG | + | chr1_1:48162155-48162174 | Msa0025150:intron | 35.0% |
| TGTTTAAGTAGAAGTGAGAG+TGG | - | chr1_1:48162208-48162227 | None:intergenic | 35.0% | |
| ! | TAGTGTGTTCAGTTTTACAG+AGG | - | chr1_1:48162327-48162346 | None:intergenic | 35.0% |
| TCTGTAAAACTGAACACACT+AGG | + | chr1_1:48162326-48162345 | Msa0025150:intron | 35.0% | |
| AACTACTTCGCATTGCAAAT+TGG | - | chr1_1:48162464-48162483 | None:intergenic | 35.0% | |
| !! | CAATGCGAAGTAGTTTTACT+TGG | + | chr1_1:48162469-48162488 | Msa0025150:intron | 35.0% |
| TCTAAAAATAAAGGAGGGGA+AGG | - | chr1_1:48162606-48162625 | None:intergenic | 35.0% | |
| ! | TCTAAGGTTTGACAATGCTT+TGG | - | chr1_1:48162678-48162697 | None:intergenic | 35.0% |
| ! | AAGCATTGTCAAACCTTAGA+TGG | + | chr1_1:48162678-48162697 | Msa0025150:CDS | 35.0% |
| AATATTGACCCTAAGGTTTG+TGG | + | chr1_1:48162755-48162774 | Msa0025150:intron | 35.0% | |
| ATATTGACCCTAAGGTTTGT+GGG | + | chr1_1:48162756-48162775 | Msa0025150:intron | 35.0% | |
| ! | AGTTCTCATGATTTTCCTCT+AGG | + | chr1_1:48162976-48162995 | Msa0025150:intron | 35.0% |
| ! | GTTCTCATGATTTTCCTCTA+GGG | + | chr1_1:48162977-48162996 | Msa0025150:intron | 35.0% |
| AAGCTTCAGCTAAACTGAAT+AGG | - | chr1_1:48163019-48163038 | None:intergenic | 35.0% | |
| TGGATCATCCATTTGTAATC+AGG | - | chr1_1:48163274-48163293 | None:intergenic | 35.0% | |
| GATTACAAATGGATGATCCA+AGG | + | chr1_1:48163274-48163293 | Msa0025150:intron | 35.0% | |
| ! | TAGCAGTTCTATGTTTTCCT+TGG | - | chr1_1:48163294-48163313 | None:intergenic | 35.0% |
| ATAGAACTGCTAGTTGAAGT+TGG | + | chr1_1:48163302-48163321 | Msa0025150:intron | 35.0% | |
| TAGAACTGCTAGTTGAAGTT+GGG | + | chr1_1:48163303-48163322 | Msa0025150:intron | 35.0% | |
| !! | GAGTGAACTTTGACTTGTAT+GGG | + | chr1_1:48163377-48163396 | Msa0025150:intron | 35.0% |
| !! | AACTTTGACTTGTATGGGAT+TGG | + | chr1_1:48163382-48163401 | Msa0025150:intron | 35.0% |
| CATGTGCAATACATGAAGAT+GGG | - | chr1_1:48163842-48163861 | None:intergenic | 35.0% | |
| CATCTTCATGTATTGCACAT+GGG | + | chr1_1:48163841-48163860 | Msa0025150:intron | 35.0% | |
| GCTGACAAATTTAAGAACTC+AGG | - | chr1_1:48164014-48164033 | None:intergenic | 35.0% | |
| ACAAACTTCAGTTTCAATGC+AGG | + | chr1_1:48164105-48164124 | Msa0025150:CDS | 35.0% | |
| GGAAGAGTTGTTATATTTGG+TGG | + | chr1_1:48164178-48164197 | Msa0025150:CDS | 35.0% | |
| ! | GTTGTTATATTTGGTGGCAT+TGG | + | chr1_1:48164184-48164203 | Msa0025150:CDS | 35.0% |
| !!! | ATATTTGGTGGCATTGGTTT+TGG | + | chr1_1:48164190-48164209 | Msa0025150:CDS | 35.0% |
| GGAAAGAGTAATAGATGATG+CGG | - | chr1_1:48164316-48164335 | None:intergenic | 35.0% | |
| ! | AATATCCATGTGGTTGATGT+GGG | - | chr1_1:48164339-48164358 | None:intergenic | 35.0% |
| ! | AAATATCCATGTGGTTGATG+TGG | - | chr1_1:48164340-48164359 | None:intergenic | 35.0% |
| ATAGTATTGCTTACCAGGAA+TGG | - | chr1_1:48164563-48164582 | None:intergenic | 35.0% | |
| ATGCAATAGTATTGCTTACC+AGG | - | chr1_1:48164568-48164587 | None:intergenic | 35.0% | |
| GTAAGCAATACTATTGCATC+TGG | + | chr1_1:48164569-48164588 | Msa0025150:intron | 35.0% | |
| !! | TTGCATCTGGTCTTTTTATG+GGG | + | chr1_1:48164582-48164601 | Msa0025150:intron | 35.0% |
| ! | CTTATTTGAAATCCACTGCA+AGG | - | chr1_1:48164676-48164695 | None:intergenic | 35.0% |
| ! | ATGGAAGTTTTTGTAACCCA+AGG | + | chr1_1:48164789-48164808 | Msa0025150:intron | 35.0% |
| ACTACAACTGCACAAAGAAA+TGG | - | chr1_1:48164900-48164919 | None:intergenic | 35.0% | |
| ! | GTTTTTAATCTATTGGCACC+CGG | + | chr1_1:48164918-48164937 | Msa0025150:CDS | 35.0% |
| ! | TTTTTAATCTATTGGCACCC+GGG | + | chr1_1:48164919-48164938 | Msa0025150:CDS | 35.0% |
| !!! | AAAGCTTTTGAAATGTTCCC+GGG | - | chr1_1:48164939-48164958 | None:intergenic | 35.0% |
| !!! | CAAAGCTTTTGAAATGTTCC+CGG | - | chr1_1:48164940-48164959 | None:intergenic | 35.0% |
| AGCATACGAAAACGGAATTT+GGG | - | chr1_1:48165108-48165127 | None:intergenic | 35.0% | |
| AAGCATACGAAAACGGAATT+TGG | - | chr1_1:48165109-48165128 | None:intergenic | 35.0% | |
| ! | GTATGCTTATGTTGTTTACG+TGG | + | chr1_1:48165121-48165140 | Msa0025150:three_prime_UTR | 35.0% |
| ACCCCAGGACATGTTTATTT+GGG | - | chr1_1:48160475-48160494 | None:intergenic | 40.0% | |
| TTATTACCACGTAGGAGAGA+TGG | - | chr1_1:48160501-48160520 | None:intergenic | 40.0% | |
| GCAAGAAGCCATGAGATTAA+CGG | - | chr1_1:48160659-48160678 | None:intergenic | 40.0% | |
| !! | GAATGGATTACCGTAGTCAT+CGG | - | chr1_1:48160878-48160897 | None:intergenic | 40.0% |
| GGAATCTAAGAGGAAGAGAT+TGG | + | chr1_1:48161130-48161149 | Msa0025150:CDS | 40.0% | |
| TTGGGAAGAAGTAGCTTCAA+TGG | + | chr1_1:48161149-48161168 | Msa0025150:CDS | 40.0% | |
| TGAGAATCAATCGAAGAGTG+TGG | + | chr1_1:48161185-48161204 | Msa0025150:CDS | 40.0% | |
| TGTGGAACAGTGTAAGAACA+AGG | + | chr1_1:48161203-48161222 | Msa0025150:CDS | 40.0% | |
| GTTGCATTTCTGCTAGTCAT+TGG | + | chr1_1:48161277-48161296 | Msa0025150:CDS | 40.0% | |
| TGTTCCATCTGCTTAAACCA+AGG | - | chr1_1:48161303-48161322 | None:intergenic | 40.0% | |
| TATTGTTGGGAATTCGCTTC+CGG | + | chr1_1:48161323-48161342 | Msa0025150:CDS | 40.0% | |
| GTGCTAAAAAAACAAGGGAC+CGG | + | chr1_1:48161673-48161692 | Msa0025150:intron | 40.0% | |
| ! | GGAGCATTTGATCTGCTAAA+AGG | - | chr1_1:48161749-48161768 | None:intergenic | 40.0% |
| ATCTTAGCATTGCATGGCAT+AGG | + | chr1_1:48162001-48162020 | Msa0025150:intron | 40.0% | |
| !! | ATAGCGACTATCGATTCAGA+TGG | + | chr1_1:48162298-48162317 | Msa0025150:intron | 40.0% |
| !! | GCGAAGTAGTTTTACTTGGA+TGG | + | chr1_1:48162473-48162492 | Msa0025150:intron | 40.0% |
| !! | GTAGTTTTACTTGGATGGAG+TGG | + | chr1_1:48162478-48162497 | Msa0025150:intron | 40.0% |
| ! | TTGACAATGCTTTGGACTTC+AGG | - | chr1_1:48162670-48162689 | None:intergenic | 40.0% |
| CATTGTCAAACCTTAGATGG+CGG | + | chr1_1:48162681-48162700 | Msa0025150:CDS | 40.0% | |
| AGGGTCAATATTGCAGGTAT+CGG | - | chr1_1:48162747-48162766 | None:intergenic | 40.0% | |
| TACCTGCAATATTGACCCTA+AGG | + | chr1_1:48162748-48162767 | Msa0025150:CDS | 40.0% | |
| AACCTTAGGGTCAATATTGC+AGG | - | chr1_1:48162753-48162772 | None:intergenic | 40.0% | |
| GTACATTCCCACAAACCTTA+GGG | - | chr1_1:48162766-48162785 | None:intergenic | 40.0% | |
| AGCAAAATACAAGACCCTAG+AGG | - | chr1_1:48162994-48163013 | None:intergenic | 40.0% | |
| CTTCAGGTAGCAATTGTTGT+TGG | + | chr1_1:48163057-48163076 | Msa0025150:intron | 40.0% | |
| ATTTCTTCTGTGGAGATGCA+TGG | + | chr1_1:48163088-48163107 | Msa0025150:CDS | 40.0% | |
| TTTCTTCTGTGGAGATGCAT+GGG | + | chr1_1:48163089-48163108 | Msa0025150:CDS | 40.0% | |
| AGATGTACTGCATACCAAGT+TGG | + | chr1_1:48163132-48163151 | Msa0025150:CDS | 40.0% | |
| GATGTACTGCATACCAAGTT+GGG | + | chr1_1:48163133-48163152 | Msa0025150:CDS | 40.0% | |
| GTGATTAACCTTACCCAACT+TGG | - | chr1_1:48163149-48163168 | None:intergenic | 40.0% | |
| !! | GGAGTGAACTTTGACTTGTA+TGG | + | chr1_1:48163376-48163395 | Msa0025150:intron | 40.0% |
| GAACTACCAGGAGGTTAAAT+TGG | + | chr1_1:48163537-48163556 | Msa0025150:intron | 40.0% | |
| CCATGTGCAATACATGAAGA+TGG | - | chr1_1:48163843-48163862 | None:intergenic | 40.0% | |
| CCATCTTCATGTATTGCACA+TGG | + | chr1_1:48163840-48163859 | Msa0025150:intron | 40.0% | |
| ! | GATATGTCGGTTGAGAAAAG+TGG | - | chr1_1:48164226-48164245 | None:intergenic | 40.0% |
| AGAGTAATAGATGATGCGGA+GGG | - | chr1_1:48164312-48164331 | None:intergenic | 40.0% | |
| AAGAGTAATAGATGATGCGG+AGG | - | chr1_1:48164313-48164332 | None:intergenic | 40.0% | |
| ! | ATATCCATGTGGTTGATGTG+GGG | - | chr1_1:48164338-48164357 | None:intergenic | 40.0% |
| GCTTGCCAAAAATATCCATG+TGG | - | chr1_1:48164349-48164368 | None:intergenic | 40.0% | |
| TTTCGAGCACATATCCTTCA+GGG | + | chr1_1:48164474-48164493 | Msa0025150:CDS | 40.0% | |
| ! | ATTTTCCTCGCAGAATGTCA+GGG | - | chr1_1:48164539-48164558 | None:intergenic | 40.0% |
| !! | TGCATCTGGTCTTTTTATGG+GGG | + | chr1_1:48164583-48164602 | Msa0025150:intron | 40.0% |
| !!! | TCTTTTTATGGGGGTGTTTC+AGG | + | chr1_1:48164592-48164611 | Msa0025150:intron | 40.0% |
| ACAACTGCACAAAGAAATGG+TGG | - | chr1_1:48164897-48164916 | None:intergenic | 40.0% | |
| ! | GTTAGCTTATTGCTCCAGTT+TGG | - | chr1_1:48164992-48165011 | None:intergenic | 40.0% |
| GTGGCAAGTATCCAACTTAA+TGG | - | chr1_1:48165060-48165079 | None:intergenic | 40.0% | |
| ! | TGCTTATGTTGTTTACGTGG+TGG | + | chr1_1:48165124-48165143 | Msa0025150:three_prime_UTR | 40.0% |
| ! | TGTTCGCATTTTACCGACAA+AGG | - | chr1_1:48165247-48165266 | None:intergenic | 40.0% |
| CGGTAAAATGCGAACAGATA+TGG | + | chr1_1:48165251-48165270 | Msa0025150:three_prime_UTR | 40.0% | |
| TGGCCCAAATAAACATGTCC+TGG | + | chr1_1:48160469-48160488 | Msa0025150:five_prime_UTR | 45.0% | |
| GGCCCAAATAAACATGTCCT+GGG | + | chr1_1:48160470-48160489 | Msa0025150:five_prime_UTR | 45.0% | |
| GCCCAAATAAACATGTCCTG+GGG | + | chr1_1:48160471-48160490 | Msa0025150:five_prime_UTR | 45.0% | |
| GACCCCAGGACATGTTTATT+TGG | - | chr1_1:48160476-48160495 | None:intergenic | 45.0% | |
| CGTTAGGGAAAGAGAGAAGA+AGG | - | chr1_1:48160603-48160622 | None:intergenic | 45.0% | |
| GGTGAAAGGGTTTGAAGGAA+CGG | - | chr1_1:48160626-48160645 | None:intergenic | 45.0% | |
| AAGACGGTGAAAGGGTTTGA+AGG | - | chr1_1:48160631-48160650 | None:intergenic | 45.0% | |
| AGAAGCCATGAGATTAACGG+CGG | - | chr1_1:48160656-48160675 | None:intergenic | 45.0% | |
| ! | TTTGGATTGGACTGAAGCTG+TGG | - | chr1_1:48160803-48160822 | None:intergenic | 45.0% |
| ! | AGGTGGTGATGTGTTTGGAT+TGG | - | chr1_1:48160816-48160835 | None:intergenic | 45.0% |
| !! | CGGTCAAAACCTGTTTCTAG+CGG | + | chr1_1:48160985-48161004 | Msa0025150:CDS | 45.0% |
| !! | AAACCTGTTTCTAGCGGCAA+CGG | + | chr1_1:48160991-48161010 | Msa0025150:CDS | 45.0% |
| TCTATACTCTGCTCCTACTC+CGG | - | chr1_1:48161028-48161047 | None:intergenic | 45.0% | |
| CTGAATCGAGGGAATCTAAG+AGG | + | chr1_1:48161120-48161139 | Msa0025150:CDS | 45.0% | |
| ! | TTTCTGCTAGTCATTGGCCT+TGG | + | chr1_1:48161283-48161302 | Msa0025150:CDS | 45.0% |
| !! | TTGGCCTTGGTTTAAGCAGA+TGG | + | chr1_1:48161296-48161315 | Msa0025150:CDS | 45.0% |
| TCATCATCAGCAAACTTGGC+CGG | - | chr1_1:48161345-48161364 | None:intergenic | 45.0% | |
| CTTAGATTGCCTGGGTGAAA+TGG | - | chr1_1:48161388-48161407 | None:intergenic | 45.0% | |
| TTTCACCCAGGCAATCTAAG+AGG | + | chr1_1:48161388-48161407 | Msa0025150:CDS | 45.0% | |
| ACGGTACATCTAACGTTGTC+CGG | - | chr1_1:48161695-48161714 | None:intergenic | 45.0% | |
| ! | ATGCTCCCTTGCTTCTTTTC+CGG | + | chr1_1:48161762-48161781 | Msa0025150:intron | 45.0% |
| CAAACCCGGAAAAGAAGCAA+GGG | - | chr1_1:48161770-48161789 | None:intergenic | 45.0% | |
| TCAAACCCGGAAAAGAAGCA+AGG | - | chr1_1:48161771-48161790 | None:intergenic | 45.0% | |
| ATAAGTCCTGGGTTCAAACC+CGG | - | chr1_1:48161784-48161803 | None:intergenic | 45.0% | |
| ! | ATTAGTGGATCGGCACTTAC+TGG | + | chr1_1:48162719-48162738 | Msa0025150:CDS | 45.0% |
| GGTACATTCCCACAAACCTT+AGG | - | chr1_1:48162767-48162786 | None:intergenic | 45.0% | |
| ! | CAGGTAGCAATTGTTGTTGG+AGG | + | chr1_1:48163060-48163079 | Msa0025150:intron | 45.0% |
| GGAGGTCGTAATTTCTTCTG+TGG | + | chr1_1:48163078-48163097 | Msa0025150:CDS | 45.0% | |
| ! | ACTGCATACCAAGTTGGGTA+AGG | + | chr1_1:48163138-48163157 | Msa0025150:intron | 45.0% |
| TGCTAGTTGAAGTTGGGATG+TGG | + | chr1_1:48163309-48163328 | Msa0025150:intron | 45.0% | |
| GCTAGTTGAAGTTGGGATGT+GGG | + | chr1_1:48163310-48163329 | Msa0025150:intron | 45.0% | |
| !! | ATGTGGGAAAGAGAGCATCT+TGG | + | chr1_1:48163326-48163345 | Msa0025150:intron | 45.0% |
| !! | AAAGAGAGCATCTTGGTGAC+AGG | + | chr1_1:48163333-48163352 | Msa0025150:intron | 45.0% |
| GGAGGCAGTTGCTATCTAAT+TGG | - | chr1_1:48163413-48163432 | None:intergenic | 45.0% | |
| TTTGCACTCCAATGATCCAG+AGG | - | chr1_1:48163434-48163453 | None:intergenic | 45.0% | |
| TGGATCATTGGAGTGCAAAG+AGG | + | chr1_1:48163435-48163454 | Msa0025150:intron | 45.0% | |
| TTTAGGTAGGGCTGTACATG+TGG | + | chr1_1:48163504-48163523 | Msa0025150:intron | 45.0% | |
| ACAGTGCCAATTTAACCTCC+TGG | - | chr1_1:48163546-48163565 | None:intergenic | 45.0% | |
| ATCAGCAAAGCACATCCAGT+TGG | - | chr1_1:48163592-48163611 | None:intergenic | 45.0% | |
| AACTGGATGTGCTTTGCTGA+TGG | + | chr1_1:48163591-48163610 | Msa0025150:intron | 45.0% | |
| ! | TCAGAAGTGCAACTCTAGGA+AGG | - | chr1_1:48163638-48163657 | None:intergenic | 45.0% |
| ! | AAGGTCAGAAGTGCAACTCT+AGG | - | chr1_1:48163642-48163661 | None:intergenic | 45.0% |
| ! | CGTTTGCTGAACCGTACAAT+AGG | + | chr1_1:48164128-48164147 | Msa0025150:CDS | 45.0% |
| CTGAACCGTACAATAGGCAA+CGG | + | chr1_1:48164134-48164153 | Msa0025150:CDS | 45.0% | |
| TGAACCGTACAATAGGCAAC+GGG | + | chr1_1:48164135-48164154 | Msa0025150:CDS | 45.0% | |
| TCCTTTCTCAAGATGCCTGA+TGG | - | chr1_1:48164161-48164180 | None:intergenic | 45.0% | |
| ! | TATCCATGTGGTTGATGTGG+GGG | - | chr1_1:48164337-48164356 | None:intergenic | 45.0% |
| CATCTACGTTGGTACCTTTG+AGG | - | chr1_1:48164417-48164436 | None:intergenic | 45.0% | |
| !! | CTCAAAGGTACCAACGTAGA+TGG | + | chr1_1:48164415-48164434 | Msa0025150:CDS | 45.0% |
| GTCATATACGCCATCTACGT+TGG | - | chr1_1:48164428-48164447 | None:intergenic | 45.0% | |
| CTTTCGAGCACATATCCTTC+AGG | + | chr1_1:48164473-48164492 | Msa0025150:CDS | 45.0% | |
| ! | CATTTTCCTCGCAGAATGTC+AGG | - | chr1_1:48164540-48164559 | None:intergenic | 45.0% |
| ATTCTCCATGTTCCTTGCAG+TGG | + | chr1_1:48164661-48164680 | Msa0025150:intron | 45.0% | |
| GAAATCCACTGCAAGGAACA+TGG | - | chr1_1:48164669-48164688 | None:intergenic | 45.0% | |
| GCTTTGTGTGGAGAACAAGT+TGG | + | chr1_1:48164954-48164973 | Msa0025150:CDS | 45.0% | |
| GGCACACTTATTGACCAAAC+TGG | + | chr1_1:48164975-48164994 | Msa0025150:CDS | 45.0% | |
| TCAGCTCTACAATTTCCCAG+TGG | - | chr1_1:48165082-48165101 | None:intergenic | 45.0% | |
| TAGCAGTAGCCTTCCTTTGT+CGG | + | chr1_1:48165231-48165250 | Msa0025150:three_prime_UTR | 45.0% | |
| ! | CGCATTTTACCGACAAAGGA+AGG | - | chr1_1:48165243-48165262 | None:intergenic | 45.0% |
| TTACCACGTAGGAGAGATGG+AGG | - | chr1_1:48160498-48160517 | None:intergenic | 50.0% | |
| GGTTTGAAGGAACGGCGTTA+GGG | - | chr1_1:48160618-48160637 | None:intergenic | 50.0% | |
| GAGATTAACGGCGGAGAAGA+CGG | - | chr1_1:48160647-48160666 | None:intergenic | 50.0% | |
| CTTCTCCGCCGTTAATCTCA+TGG | + | chr1_1:48160648-48160667 | Msa0025150:exon | 50.0% | |
| AGTGGTGGTTGTTATCGTCG+TGG | - | chr1_1:48160708-48160727 | None:intergenic | 50.0% | |
| AATCCATTCGACGATGACGC+TGG | + | chr1_1:48160889-48160908 | Msa0025150:CDS | 50.0% | |
| TGTGATGCAACGACGTCGTA+TGG | + | chr1_1:48160949-48160968 | Msa0025150:CDS | 50.0% | |
| TTCCTGCTTCCATTTCACCC+AGG | + | chr1_1:48161376-48161395 | Msa0025150:CDS | 50.0% | |
| ! | TGCTCCCTTGCTTCTTTTCC+GGG | + | chr1_1:48161763-48161782 | Msa0025150:intron | 50.0% |
| ! | TCTTTTCCGGGTTTGAACCC+AGG | + | chr1_1:48161775-48161794 | Msa0025150:intron | 50.0% |
| ATGTTGAGTGTTTGGGCGAG+TGG | + | chr1_1:48162062-48162081 | Msa0025150:intron | 50.0% | |
| GTTTACTTGACCTCCACTGC+TGG | - | chr1_1:48162645-48162664 | None:intergenic | 50.0% | |
| GAACAACTCTCCGCCATCTA+AGG | - | chr1_1:48162694-48162713 | None:intergenic | 50.0% | |
| GTTGCAATAGCTTCCCGTCT+TGG | + | chr1_1:48162942-48162961 | Msa0025150:CDS | 50.0% | |
| AATAGCTTCCCGTCTTGGTG+TGG | + | chr1_1:48162947-48162966 | Msa0025150:CDS | 50.0% | |
| ACTGTACCTCCACACCAAGA+CGG | - | chr1_1:48162959-48162978 | None:intergenic | 50.0% | |
| GATGCATGGGTAACTGCAAC+TGG | + | chr1_1:48163102-48163121 | Msa0025150:CDS | 50.0% | |
| TAGATAGCAACTGCCTCCTC+TGG | + | chr1_1:48163415-48163434 | Msa0025150:intron | 50.0% | |
| AACTGCCTCCTCTGGATCAT+TGG | + | chr1_1:48163423-48163442 | Msa0025150:intron | 50.0% | |
| ATGGCCCGTTGCCTATTGTA+CGG | - | chr1_1:48164142-48164161 | None:intergenic | 50.0% | |
| GCCATCAGGCATCTTGAGAA+AGG | + | chr1_1:48164157-48164176 | Msa0025150:CDS | 50.0% | |
| CCGAAGAGCAGCAGATATGT+CGG | - | chr1_1:48164239-48164258 | None:intergenic | 50.0% | |
| CCGACATATCTGCTGCTCTT+CGG | + | chr1_1:48164236-48164255 | Msa0025150:CDS | 50.0% | |
| CGACATATCTGCTGCTCTTC+GGG | + | chr1_1:48164237-48164256 | Msa0025150:CDS | 50.0% | |
| TTTCCCCCACATCAACCACA+TGG | + | chr1_1:48164331-48164350 | Msa0025150:intron | 50.0% | |
| CTGCTCTGCAGTTAATGCTC+AGG | + | chr1_1:48164387-48164406 | Msa0025150:intron | 50.0% | |
| AATGCTCAGGCTGTCCTCAA+AGG | + | chr1_1:48164400-48164419 | Msa0025150:CDS | 50.0% | |
| TCTAGACACTAGCTCCCTGA+AGG | - | chr1_1:48164491-48164510 | None:intergenic | 50.0% | |
| TTCAGGGAGCTAGTGTCTAG+AGG | + | chr1_1:48164490-48164509 | Msa0025150:CDS | 50.0% | |
| !! | GTCTAGAGGTGTCACCTCTA+TGG | + | chr1_1:48164504-48164523 | Msa0025150:CDS | 50.0% |
| CAGGGCTGACATATCCATAG+AGG | - | chr1_1:48164521-48164540 | None:intergenic | 50.0% | |
| TGCGAGGAAAATGCCATTCC+TGG | + | chr1_1:48164547-48164566 | Msa0025150:CDS | 50.0% | |
| AGTTGGATACTTGCCACCAC+TGG | + | chr1_1:48165063-48165082 | Msa0025150:three_prime_UTR | 50.0% | |
| GTTGGATACTTGCCACCACT+GGG | + | chr1_1:48165064-48165083 | Msa0025150:three_prime_UTR | 50.0% | |
| GCTCTACAATTTCCCAGTGG+TGG | - | chr1_1:48165079-48165098 | None:intergenic | 50.0% | |
| GGGTTTGAAGGAACGGCGTT+AGG | - | chr1_1:48160619-48160638 | None:intergenic | 55.0% | |
| GGTGGTTGTTATCGTCGTGG+AGG | - | chr1_1:48160705-48160724 | None:intergenic | 55.0% | |
| ! | AGAAGTGGTGGTGAGAGTGG+TGG | - | chr1_1:48160780-48160799 | None:intergenic | 55.0% |
| ! | TGGAGAAGTGGTGGTGAGAG+TGG | - | chr1_1:48160783-48160802 | None:intergenic | 55.0% |
| CTGAAGCTGTGGAGAAGTGG+TGG | - | chr1_1:48160792-48160811 | None:intergenic | 55.0% | |
| GGACTGAAGCTGTGGAGAAG+TGG | - | chr1_1:48160795-48160814 | None:intergenic | 55.0% | |
| ! | GACGGAGGTGGTGATGTGTT+TGG | - | chr1_1:48160821-48160840 | None:intergenic | 55.0% |
| GGAGACGACACCGATGACTA+CGG | + | chr1_1:48160865-48160884 | Msa0025150:CDS | 55.0% | |
| CTACCAGCGTCATCGTCGAA+TGG | - | chr1_1:48160895-48160914 | None:intergenic | 55.0% | |
| TGCCTGGGTGAAATGGAAGC+AGG | - | chr1_1:48161381-48161400 | None:intergenic | 55.0% | |
| CTGTACCTCCACACCAAGAC+GGG | - | chr1_1:48162958-48162977 | None:intergenic | 55.0% | |
| ! | AGCATCTTGGTGACAGGCCA+GGG | + | chr1_1:48163339-48163358 | Msa0025150:intron | 55.0% |
| CAAAGTTCACTCCCCAGCTG+TGG | - | chr1_1:48163369-48163388 | None:intergenic | 55.0% | |
| GCACTCCAATGATCCAGAGG+AGG | - | chr1_1:48163431-48163450 | None:intergenic | 55.0% | |
| AGGGCTGTACATGTGGAGTG+AGG | + | chr1_1:48163511-48163530 | Msa0025150:intron | 55.0% | |
| GGAGTGAGGTCAGAACTACC+AGG | + | chr1_1:48163525-48163544 | Msa0025150:intron | 55.0% | |
| GTGAGGTCAGAACTACCAGG+AGG | + | chr1_1:48163528-48163547 | Msa0025150:intron | 55.0% | |
| ACAATAGGCAACGGGCCATC+AGG | + | chr1_1:48164143-48164162 | Msa0025150:CDS | 55.0% | |
| !!! | GGTGGCATTGGTTTTGGTGC+TGG | + | chr1_1:48164196-48164215 | Msa0025150:CDS | 55.0% |
| TAGGAGAGATGGAGGACCCC+AGG | - | chr1_1:48160490-48160509 | None:intergenic | 60.0% | |
| GGTCCTCCATCTCTCCTACG+TGG | + | chr1_1:48160492-48160511 | Msa0025150:five_prime_UTR | 60.0% | |
| CGGCGGAGAAGACGGTGAAA+GGG | - | chr1_1:48160639-48160658 | None:intergenic | 60.0% | |
| ACGGCGGAGAAGACGGTGAA+AGG | - | chr1_1:48160640-48160659 | None:intergenic | 60.0% | |
| !! | AGGTTTGGTGGAGGTGGTGG+TGG | - | chr1_1:48160735-48160754 | None:intergenic | 60.0% |
| !! | CGAAGGTTTGGTGGAGGTGG+TGG | - | chr1_1:48160738-48160757 | None:intergenic | 60.0% |
| !! | GTGCGAAGGTTTGGTGGAGG+TGG | - | chr1_1:48160741-48160760 | None:intergenic | 60.0% |
| !! | GAGGTGCGAAGGTTTGGTGG+AGG | - | chr1_1:48160744-48160763 | None:intergenic | 60.0% |
| GGTGAGGTGCGAAGGTTTGG+TGG | - | chr1_1:48160747-48160766 | None:intergenic | 60.0% | |
| GGTGGTGAGGTGCGAAGGTT+TGG | - | chr1_1:48160750-48160769 | None:intergenic | 60.0% | |
| !! | TGGTGGTTGTGGTGGTGGTG+AGG | - | chr1_1:48160763-48160782 | None:intergenic | 60.0% |
| GAGAGTGGTGGTTGTGGTGG+TGG | - | chr1_1:48160768-48160787 | None:intergenic | 60.0% | |
| GGTGAGAGTGGTGGTTGTGG+TGG | - | chr1_1:48160771-48160790 | None:intergenic | 60.0% | |
| GGTGGTGAGAGTGGTGGTTG+TGG | - | chr1_1:48160717-48160736 | None:intergenic | 60.0% | |
| CCACCGTTGCCGCTAGAAAC+AGG | - | chr1_1:48160997-48161016 | None:intergenic | 60.0% | |
| !! | CCTGTTTCTAGCGGCAACGG+TGG | + | chr1_1:48160994-48161013 | Msa0025150:CDS | 60.0% |
| !! | GTTTCTAGCGGCAACGGTGG+AGG | + | chr1_1:48160997-48161016 | Msa0025150:CDS | 60.0% |
| ! | AGCTTCCCGTCTTGGTGTGG+AGG | + | chr1_1:48162950-48162969 | Msa0025150:CDS | 60.0% |
| ! | GAGCATCTTGGTGACAGGCC+AGG | + | chr1_1:48163338-48163357 | Msa0025150:intron | 60.0% |
| ! | TCTTGGTGACAGGCCAGGGA+AGG | + | chr1_1:48163343-48163362 | Msa0025150:intron | 60.0% |
| TGCTGCTCTTCGGGCTTCAG+AGG | + | chr1_1:48164246-48164265 | Msa0025150:CDS | 60.0% | |
| GCTGCTCTTCGGGCTTCAGA+GGG | + | chr1_1:48164247-48164266 | Msa0025150:CDS | 60.0% | |
| GTCAGCCCTGACATTCTGCG+AGG | + | chr1_1:48164531-48164550 | Msa0025150:CDS | 60.0% | |
| !! | GGTGGTGGTGGTGAGAGTGG+TGG | - | chr1_1:48160723-48160742 | None:intergenic | 65.0% |
| !! | GGAGGTGGTGGTGGTGAGAG+TGG | - | chr1_1:48160726-48160745 | None:intergenic | 65.0% |
| !! | GTGGTGGTGGTGAGGTGCGA+AGG | - | chr1_1:48160755-48160774 | None:intergenic | 65.0% |
| ! | GGTGTCGTCTCCGTCGTCGT+CGG | - | chr1_1:48160857-48160876 | None:intergenic | 65.0% |
| GGAGTGGCTACGTCCAGCAG+TGG | + | chr1_1:48162629-48162648 | Msa0025150:CDS | 65.0% | |
| GTGGCTACGTCCAGCAGTGG+AGG | + | chr1_1:48162632-48162651 | Msa0025150:CDS | 65.0% | |
| GTCTCCGTCGTCGTCGGCGA+CGG | - | chr1_1:48160851-48160870 | None:intergenic | 70.0% | |
| ! | GGCAACGGTGGAGGAAGCGC+CGG | + | chr1_1:48161006-48161025 | Msa0025150:CDS | 70.0% |
| !! | GGTGGAGGAAGCGCCGGAGT+AGG | + | chr1_1:48161012-48161031 | Msa0025150:CDS | 70.0% |
| AGGCCAGGGAAGGCCACAGC+TGG | + | chr1_1:48163353-48163372 | Msa0025150:intron | 70.0% | |
| GGCCAGGGAAGGCCACAGCT+GGG | + | chr1_1:48163354-48163373 | Msa0025150:intron | 70.0% | |
| GCCAGGGAAGGCCACAGCTG+GGG | + | chr1_1:48163355-48163374 | Msa0025150:intron | 70.0% | |
| TCCCCAGCTGTGGCCTTCCC+TGG | - | chr1_1:48163359-48163378 | None:intergenic | 70.0% | |
| TCCGTCGTCGTCGGCGACGG+CGG | - | chr1_1:48160848-48160867 | None:intergenic | 75.0% | |
| ! | GACGGCGGCGGAGACGGAGG+TGG | - | chr1_1:48160833-48160852 | None:intergenic | 80.0% |
| ! | GTCGGCGACGGCGGCGGAGA+CGG | - | chr1_1:48160839-48160858 | None:intergenic | 80.0% |
| ! | GTCGTCGTCGGCGACGGCGG+CGG | - | chr1_1:48160845-48160864 | None:intergenic | 80.0% |
| ! | GCCGCCGTCGCCGACGACGA+CGG | + | chr1_1:48160844-48160863 | Msa0025150:CDS | 80.0% |
| ! | GGCGACGGCGGCGGAGACGG+AGG | - | chr1_1:48160836-48160855 | None:intergenic | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_1 | gene | 48160467 | 48165318 | 48160467 | ID=Msa0025150;Name=Msa0025150 |
| chr1_1 | mRNA | 48160467 | 48165318 | 48160467 | ID=Msa0025150-mRNA-1;Parent=Msa0025150;Name=Msa0025150-mRNA-1;_AED=0.05;_eAED=0.05;_QI=200|1|1|1|1|1|7|308|512 |
| chr1_1 | exon | 48160467 | 48161409 | 48160467 | ID=Msa0025150-mRNA-1:exon:13761;Parent=Msa0025150-mRNA-1 |
| chr1_1 | exon | 48162625 | 48162769 | 48162625 | ID=Msa0025150-mRNA-1:exon:13762;Parent=Msa0025150-mRNA-1 |
| chr1_1 | exon | 48162918 | 48162971 | 48162918 | ID=Msa0025150-mRNA-1:exon:13763;Parent=Msa0025150-mRNA-1 |
| chr1_1 | exon | 48163063 | 48163154 | 48163063 | ID=Msa0025150-mRNA-1:exon:13764;Parent=Msa0025150-mRNA-1 |
| chr1_1 | exon | 48164033 | 48164268 | 48164033 | ID=Msa0025150-mRNA-1:exon:13765;Parent=Msa0025150-mRNA-1 |
| chr1_1 | exon | 48164398 | 48164568 | 48164398 | ID=Msa0025150-mRNA-1:exon:13766;Parent=Msa0025150-mRNA-1 |
| chr1_1 | exon | 48164913 | 48165318 | 48164913 | ID=Msa0025150-mRNA-1:exon:13767;Parent=Msa0025150-mRNA-1 |
| chr1_1 | five_prime_UTR | 48160467 | 48160666 | 48160467 | ID=Msa0025150-mRNA-1:five_prime_utr;Parent=Msa0025150-mRNA-1 |
| chr1_1 | CDS | 48160667 | 48161409 | 48160667 | ID=Msa0025150-mRNA-1:cds;Parent=Msa0025150-mRNA-1 |
| chr1_1 | CDS | 48162625 | 48162769 | 48162625 | ID=Msa0025150-mRNA-1:cds;Parent=Msa0025150-mRNA-1 |
| chr1_1 | CDS | 48162918 | 48162971 | 48162918 | ID=Msa0025150-mRNA-1:cds;Parent=Msa0025150-mRNA-1 |
| chr1_1 | CDS | 48163063 | 48163154 | 48163063 | ID=Msa0025150-mRNA-1:cds;Parent=Msa0025150-mRNA-1 |
| chr1_1 | CDS | 48164033 | 48164268 | 48164033 | ID=Msa0025150-mRNA-1:cds;Parent=Msa0025150-mRNA-1 |
| chr1_1 | CDS | 48164398 | 48164568 | 48164398 | ID=Msa0025150-mRNA-1:cds;Parent=Msa0025150-mRNA-1 |
| chr1_1 | CDS | 48164913 | 48165010 | 48164913 | ID=Msa0025150-mRNA-1:cds;Parent=Msa0025150-mRNA-1 |
| chr1_1 | three_prime_UTR | 48165011 | 48165318 | 48165011 | ID=Msa0025150-mRNA-1:three_prime_utr;Parent=Msa0025150-mRNA-1 |
| Gene Sequence |
| Protein sequence |
