AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0025220

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0025220 MtrunA17_Chr3g0088371 83.152 184 28 1 618 798 1 184 9.74e-103 314
Msa0025220 MtrunA17_Chr3g0082121 31.693 691 384 17 41 727 49 655 8.75e-101 327
Msa0025220 MtrunA17_Chr2g0324011 30.709 635 364 13 36 665 8 571 1.22e-100 323
Msa0025220 MtrunA17_Chr1g0202341 29.606 635 366 17 34 662 50 609 2.29e-79 269
Msa0025220 MtrunA17_Chr8g0363841 28.776 629 375 13 40 665 22 580 5.90e-75 257
Msa0025220 MtrunA17_Chr1g0203721 26.026 780 452 20 1 739 16 711 7.33e-73 255
Msa0025220 MtrunA17_Chr5g0448761 25.318 707 449 14 31 728 56 692 1.50e-69 244
Msa0025220 MtrunA17_Chr2g0296781 27.688 679 405 20 39 708 1 602 3.68e-69 242
Msa0025220 MtrunA17_Chr6g0458391 26.984 630 357 15 41 662 231 765 3.59e-65 232
Msa0025220 MtrunA17_Chr6g0477261 29.032 527 316 14 180 699 7 482 5.29e-64 226
Msa0025220 MtrunA17_Chr1g0164591 35.312 320 192 4 131 448 1 307 5.06e-63 214
Msa0025220 MtrunA17_Chr5g0441581 24.835 757 461 21 32 773 26 689 3.88e-60 216
Msa0025220 MtrunA17_Chr2g0287651 25.437 629 389 13 39 662 79 632 2.81e-58 214
Msa0025220 MtrunA17_Chr1g0207551 24.964 697 429 17 31 718 30 641 2.15e-55 204
Msa0025220 MtrunA17_Chr5g0440451 24.234 718 417 18 34 721 42 662 6.55e-55 204
Msa0025220 MtrunA17_Chr2g0329031 25.469 640 389 16 23 658 2 557 6.41e-54 199
Msa0025220 MtrunA17_Chr1g0196541 25.199 627 395 16 39 662 1 556 7.73e-54 199
Msa0025220 MtrunA17_Chr1g0172971 81.197 117 21 1 1 116 1 117 1.51e-53 194
Msa0025220 MtrunA17_Chr7g0258861 35.621 306 173 6 36 336 8 294 3.92e-53 187
Msa0025220 MtrunA17_Chr3g0118611 27.634 503 304 10 221 719 111 557 1.30e-52 196
Msa0025220 MtrunA17_Chr1g0198761 26.840 652 381 19 26 660 38 610 3.25e-52 194
Msa0025220 MtrunA17_Chr3g0080351 24.414 725 444 17 34 752 75 701 2.73e-49 187
Msa0025220 MtrunA17_Chr2g0287061 24.127 630 359 17 41 665 189 704 3.11e-47 180
Msa0025220 MtrunA17_Chr2g0290391 25.857 642 373 19 38 660 54 611 9.01e-47 177
Msa0025220 MtrunA17_Chr1g0203051 22.373 590 389 8 50 637 94 616 1.76e-46 176
Msa0025220 MtrunA17_Chr2g0276841 26.101 636 374 21 49 670 84 637 7.09e-45 172
Msa0025220 MtrunA17_Chr5g0448511 25.664 452 282 10 216 665 1 400 3.89e-44 167
Msa0025220 MtrunA17_Chr2g0291591 25.651 499 315 13 16 499 44 501 1.10e-41 160
Msa0025220 MtrunA17_Chr2g0291581 24.083 627 395 14 38 662 74 621 1.16e-41 162
Msa0025220 MtrunA17_Chr5g0431001 27.716 451 281 12 40 473 66 488 1.99e-41 159
Msa0025220 MtrunA17_Chr6g0475591 90.411 73 7 0 188 260 1 73 5.48e-40 141
Msa0025220 MtrunA17_Chr2g0294841 26.640 503 316 15 3 482 7 479 1.57e-35 144
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0025220 AT4G38180.1 27.925 641 382 14 32 665 70 637 1.44e-70 248
Msa0025220 AT4G15090.1 24.827 721 448 16 50 753 66 709 3.10e-60 219
Msa0025220 AT4G15090.5 24.827 721 448 16 50 753 66 709 3.10e-60 219
Msa0025220 AT4G15090.3 24.827 721 448 16 50 753 66 709 3.10e-60 219
Msa0025220 AT4G15090.2 24.827 721 448 16 50 753 66 709 3.10e-60 219
Msa0025220 AT4G15090.4 24.827 721 448 16 50 753 66 709 3.10e-60 219
Msa0025220 AT2G27110.2 26.466 597 365 15 127 719 108 634 4.96e-54 201
Msa0025220 AT2G27110.1 26.466 597 365 15 127 719 108 634 4.96e-54 201
Msa0025220 AT2G27110.3 26.937 542 325 13 180 719 17 489 2.72e-53 197
Msa0025220 AT3G06250.2 25.118 633 351 16 34 661 189 703 3.04e-51 192
Msa0025220 AT3G06250.1 25.118 633 351 16 34 661 189 703 3.04e-51 192
Msa0025220 AT3G06250.3 25.118 633 351 16 34 661 189 703 3.04e-51 192
Msa0025220 AT1G76320.3 24.815 677 413 19 50 720 12 598 1.11e-50 189
Msa0025220 AT1G76320.2 24.815 677 413 19 50 720 12 598 5.59e-50 188
Msa0025220 AT1G76320.1 24.815 677 413 19 50 720 12 598 6.21e-50 188
Msa0025220 AT1G76320.4 24.815 677 413 19 50 720 12 598 6.21e-50 188
Msa0025220 AT3G22170.2 22.951 732 443 18 34 753 69 691 6.97e-49 186
Msa0025220 AT3G22170.1 22.951 732 443 18 34 753 69 691 6.97e-49 186
Msa0025220 AT5G18960.2 24.575 647 360 18 24 661 200 727 2.65e-45 175
Msa0025220 AT5G18960.1 24.575 647 360 18 24 661 200 727 2.65e-45 175
Msa0025220 AT4G38170.1 25.290 431 264 11 235 662 24 399 5.12e-44 167
Msa0025220 AT1G10240.2 24.880 623 376 19 49 659 62 604 5.94e-42 164
Msa0025220 AT1G10240.1 24.880 623 376 19 49 659 62 604 5.94e-42 164
Msa0025220 AT5G28530.1 24.100 639 388 17 40 660 60 619 2.49e-41 162
Msa0025220 AT2G32250.5 24.295 745 427 22 4 743 10 622 1.14e-40 160
Msa0025220 AT5G28530.3 23.944 639 385 18 40 660 60 615 1.48e-40 159
Msa0025220 AT5G28530.2 23.944 639 385 18 40 660 60 615 1.48e-40 159
Msa0025220 AT2G32250.2 24.295 745 427 22 4 743 10 622 2.17e-40 160
Msa0025220 AT2G32250.4 24.295 745 427 22 4 743 10 622 2.17e-40 160
Msa0025220 AT2G32250.6 24.295 745 427 22 4 743 10 622 2.42e-40 160
Msa0025220 AT2G32250.1 24.295 745 427 22 4 743 10 622 2.42e-40 160
Msa0025220 AT2G32250.3 24.295 745 427 22 4 743 10 622 2.42e-40 160
Msa0025220 AT2G32250.7 24.320 699 395 20 50 743 12 581 1.22e-39 157
Msa0025220 AT2G32250.8 24.320 699 395 20 50 743 12 581 1.32e-39 157
Msa0025220 AT1G80010.1 24.043 653 373 23 41 662 101 661 2.55e-37 150
Msa0025220 AT1G52520.1 22.311 623 408 15 41 662 91 638 1.39e-33 138
Msa0025220 AT4G19990.1 28.731 268 184 4 219 483 106 369 1.61e-27 119
Msa0025220 AT4G19990.1 35.338 133 72 3 591 721 438 558 1.22e-12 72.0
Msa0025220 AT4G19990.7 28.731 268 184 4 219 483 177 440 1.78e-27 119
Msa0025220 AT4G19990.7 35.338 133 72 3 591 721 509 629 1.50e-12 72.0
Msa0025220 AT4G19990.5 28.731 268 184 4 219 483 163 426 1.85e-27 119
Msa0025220 AT4G19990.5 35.338 133 72 3 591 721 495 615 1.40e-12 72.0
Msa0025220 AT4G19990.3 28.731 268 184 4 219 483 163 426 1.96e-27 119
Msa0025220 AT4G19990.3 35.338 133 72 3 591 721 495 615 1.42e-12 72.0
Msa0025220 AT4G19990.4 28.731 268 184 4 219 483 163 426 1.96e-27 119
Msa0025220 AT4G19990.4 35.338 133 72 3 591 721 495 615 1.42e-12 72.0
Msa0025220 AT4G19990.6 28.731 268 184 4 219 483 163 426 2.31e-27 119
Msa0025220 AT4G19990.6 35.338 133 72 3 591 721 495 615 1.32e-12 72.0
Msa0025220 AT4G19990.2 28.731 268 184 4 219 483 163 426 2.31e-27 119
Msa0025220 AT4G19990.2 35.338 133 72 3 591 721 495 615 1.32e-12 72.0
Msa0025220 AT5G28530.4 21.781 629 352 20 40 660 60 556 1.80e-22 103
Msa0025220 AT5G28530.5 21.622 629 349 21 40 660 60 552 9.24e-22 100

Find 123 sgRNAs with CRISPR-Local

Find 175 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCATGCTGAGTTGGACTTTA+AGG 0.133287 1_1:+48246617 Msa0025220:CDS
TTTCGATGAGTTAACTAATT+TGG 0.156761 1_1:+48246308 Msa0025220:CDS
AGTCGCTTCTTTGACCTAAT+TGG 0.186128 1_1:-48247443 None:intergenic
CTTTAGTCATTTCAACATTA+TGG 0.194287 1_1:+48246575 Msa0025220:CDS
CAACAAGATTATGCTCTATT+TGG 0.198611 1_1:+48245524 Msa0025220:CDS
TTCATTTCAGCTGCCTTTCT+TGG 0.201003 1_1:+48246027 Msa0025220:intron
CATCGTAAGAGTGTGTTATT+TGG 0.276792 1_1:+48246060 Msa0025220:CDS
TATGGTTTGAGGTTTCTTAT+TGG 0.280533 1_1:-48246154 None:intergenic
TTCTTTGACCTAATTGGATT+TGG 0.299426 1_1:-48247437 None:intergenic
AATCAGATTTCGACTACAAT+TGG 0.318540 1_1:+48246349 Msa0025220:CDS
TGTTCTTGAGGCAGGGAAAA+AGG 0.322946 1_1:+48247289 Msa0025220:CDS
GCCGATATTTATTGTTTGTT+CGG 0.341758 1_1:-48245574 None:intergenic
TTGGTTTGAATATTATCTTC+TGG 0.345646 1_1:+48247686 Msa0025220:three_prime_UTR
TTTGCTTCTTCCGAGCTATA+AGG 0.345757 1_1:-48247505 None:intergenic
GGTTTCGAATGTTGATGTTT+TGG 0.354913 1_1:+48246872 Msa0025220:CDS
ACTAGCCTGGTCTGTGTATA+TGG 0.355820 1_1:-48246172 None:intergenic
TATGCATTGGTCTTCAGTTT+GGG 0.370760 1_1:+48246449 Msa0025220:CDS
AATTCTTGATTGTTATGTAT+TGG 0.372244 1_1:+48247667 Msa0025220:three_prime_UTR
CTCAACGGTGTTCTTGAGGC+AGG 0.386173 1_1:+48247281 Msa0025220:CDS
AACAATAAATATCGGCCATT+AGG 0.388497 1_1:+48245581 Msa0025220:CDS
ACCGAACAAACAATAAATAT+CGG 0.389395 1_1:+48245573 Msa0025220:CDS
TTTCAATTTATCATATCTAA+TGG 0.390380 1_1:+48244661 None:intergenic
GTATGCATTGGTCTTCAGTT+TGG 0.392120 1_1:+48246448 Msa0025220:CDS
GTCTTTAGTGCCAACATTCA+TGG 0.395146 1_1:-48247165 None:intergenic
TTCTCATACTCAACAAGAAC+TGG 0.395633 1_1:-48245044 None:intergenic
AAGAAAGACCAAATCCAATT+AGG 0.397771 1_1:+48247429 Msa0025220:CDS
TTTGGTCTTTCTTTGAACTT+TGG 0.398856 1_1:-48247419 None:intergenic
TTCCTTCAAATACTATTATG+AGG 0.399583 1_1:+48246749 Msa0025220:CDS
GAGGAGTTTCTTATTTCTAA+AGG 0.403538 1_1:+48247314 Msa0025220:CDS
TAAAGAATCATGGAAGTCTT+TGG 0.408500 1_1:+48244815 Msa0025220:CDS
CATGTCGTATGTTTGAGAAC+CGG 0.411671 1_1:+48246997 Msa0025220:CDS
GATTATGATCTTCAAACCTT+GGG 0.413114 1_1:-48246920 None:intergenic
ATAACACTGGATTCTCTGTT+AGG 0.417808 1_1:+48244886 Msa0025220:CDS
GGGTTGTCACAGTCGACATT+AGG 0.419786 1_1:+48246955 Msa0025220:CDS
CGATTATGATCTTCAAACCT+TGG 0.425681 1_1:-48246921 None:intergenic
CGAGAAGTAAATGAAGTTCA+AGG 0.430014 1_1:+48245221 Msa0025220:CDS
AGCTGGAATATATTTGAAGT+TGG 0.433136 1_1:+48245103 Msa0025220:CDS
TGGTCTGTGTATATGGTTTG+AGG 0.447350 1_1:-48246165 None:intergenic
GAAAGGGTTGGTTGTAAAGC+TGG 0.447509 1_1:+48245086 Msa0025220:CDS
CGCTTTAAAACATATTGTGC+AGG 0.447633 1_1:-48247098 None:intergenic
CGTTATGCTTGTAACAAAGA+AGG 0.449439 1_1:+48244969 Msa0025220:CDS
GCTTTAATAAATTCTAAAGC+TGG 0.450264 1_1:+48245251 Msa0025220:CDS
ATCTGAGAGTGGACAATTGA+CGG 0.452529 1_1:+48244740 Msa0025220:CDS
TGGTCTTTGCTCATGGCACA+TGG 0.452802 1_1:+48246239 Msa0025220:CDS
GGCCTACTTCGGACTTTAAG+TGG 0.458978 1_1:+48246403 Msa0025220:CDS
ATGTCGTATGTTTGAGAACC+GGG 0.461344 1_1:+48246998 Msa0025220:CDS
ACAAAATAAGAAATCGGATA+AGG 0.469178 1_1:+48244935 Msa0025220:CDS
CTCCTCATAATAGTATTTGA+AGG 0.485089 1_1:-48246751 None:intergenic
TTACAACCAACCCTTTCCTC+TGG 0.485330 1_1:-48245080 None:intergenic
TTTAATTATGCATATAACAC+TGG 0.485542 1_1:+48244873 Msa0025220:CDS
TCTAATGACAACTCGTCAAA+AGG 0.488137 1_1:+48245364 Msa0025220:CDS
CTCAAGTAGCACAAATGCTC+TGG 0.489977 1_1:-48245191 None:intergenic
CAATTCACAAAATAAGAAAT+CGG 0.490263 1_1:+48244929 Msa0025220:CDS
TATGAGGAGGACACAACAAA+AGG 0.490908 1_1:+48246765 Msa0025220:CDS
ATGATTGTCAAAACCAAGAA+AGG 0.491378 1_1:-48246040 None:intergenic
CTGTCTATGAACCATCTGTT+GGG 0.491412 1_1:+48247390 Msa0025220:CDS
ATCAGATTTCGACTACAATT+GGG 0.491708 1_1:+48246350 Msa0025220:CDS
CGTCAAAAGGAGATGGTGGC+TGG 0.492100 1_1:+48245377 Msa0025220:CDS
ACATTATGGTTCAGAGAATG+AGG 0.494022 1_1:+48246589 Msa0025220:CDS
GACCGCATAAGCTGACTGTT+GGG 0.496307 1_1:-48246669 None:intergenic
GAAGCGATGGGTCAAGGAGT+TGG 0.502080 1_1:+48245296 Msa0025220:CDS
TGTCTTCTGCAGCATCAACT+TGG 0.502977 1_1:-48245469 None:intergenic
AAATGCTCTGGTTTATGTAA+TGG 0.504865 1_1:-48245179 None:intergenic
CTCATTCAAATCGTATGCAT+TGG 0.507227 1_1:+48246436 Msa0025220:CDS
ATCATAATCGACTTGATGAA+AGG 0.507955 1_1:+48246934 Msa0025220:CDS
TTTAAGTCCGAAAATCGAAA+AGG 0.508080 1_1:-48245335 None:intergenic
GAGGGATAATCATGCTGAGT+TGG 0.508852 1_1:+48246608 Msa0025220:CDS
ATTGGTCTTCAGTTTGGGTG+AGG 0.509410 1_1:+48246454 Msa0025220:CDS
TGTCTATAAGATATATAAGT+GGG 0.514682 1_1:+48245139 Msa0025220:CDS
GATCTTCAAACCTTGGGGAA+AGG 0.519004 1_1:-48246914 None:intergenic
TAAAGAATCGAACAAGTGAA+TGG 0.519618 1_1:-48246557 None:intergenic
TCATAATCGACTTGATGAAA+GGG 0.526860 1_1:+48246935 Msa0025220:CDS
CATAATAGTATTTGAAGGAA+AGG 0.529686 1_1:-48246746 None:intergenic
GACAGAAATTCCTTATAGCT+CGG 0.533906 1_1:+48247495 Msa0025220:CDS
GAGAACATCTTATGAAGCGA+TGG 0.538371 1_1:+48245283 Msa0025220:CDS
TAACAAAGAAGGTTTCAAGA+AGG 0.538422 1_1:+48244980 Msa0025220:CDS
AATCGAACAAGTGAATGGTC+TGG 0.540971 1_1:-48246552 None:intergenic
ATGAGGAGGACACAACAAAA+GGG 0.542065 1_1:+48246766 Msa0025220:CDS
AACAAAGAAGGTTTCAAGAA+GGG 0.545537 1_1:+48244981 Msa0025220:CDS
TCTTATGAAGCGATGGGTCA+AGG 0.545849 1_1:+48245290 Msa0025220:CDS
CATTTAGTGATAAAGAATCA+TGG 0.546005 1_1:+48244805 Msa0025220:CDS
CTGAAATCCACCATGAATGT+TGG 0.557140 1_1:+48247155 Msa0025220:CDS
ACTTCAACAATGCACTAGCC+TGG 0.560876 1_1:-48246185 None:intergenic
AATGAAGCTCTCTCGAAACC+AGG 0.565261 1_1:+48245431 Msa0025220:CDS
TGAAAATTCAGTTATTGATG+CGG 0.565546 1_1:+48244764 Msa0025220:CDS
GCTGTCTATGAACCATCTGT+TGG 0.568181 1_1:+48247389 Msa0025220:CDS
TACACGTGTTTGCGCAGATG+CGG 0.571672 1_1:+48247241 Msa0025220:CDS
ATGTCTATAAGATATATAAG+TGG 0.572287 1_1:+48245138 Msa0025220:CDS
GCGATGGGTCAAGGAGTTGG+AGG 0.575794 1_1:+48245299 Msa0025220:CDS
GGACCGCATAAGCTGACTGT+TGG 0.579264 1_1:-48246670 None:intergenic
TTTGGTGCAGTCCCAACAGA+TGG 0.581566 1_1:-48247401 None:intergenic
GAAGCAAAAGAAAGATGATG+AGG 0.585686 1_1:+48247520 Msa0025220:CDS
TGGTGTATACTTGTTTACTA+CGG 0.585960 1_1:-48246691 None:intergenic
ATATTAACTTCATCTGAGAG+TGG 0.588105 1_1:+48244729 Msa0025220:CDS
TCAACGGTGTTCTTGAGGCA+GGG 0.590097 1_1:+48247282 Msa0025220:CDS
ATTTCTCAACGGTGTTCTTG+AGG 0.591378 1_1:+48247277 Msa0025220:CDS
ATAAGTTAGGAAAGATGATG+AGG 0.591839 1_1:+48247582 Msa0025220:three_prime_UTR
TTGAAGAAAACCTTTCCCCA+AGG 0.594796 1_1:+48246904 Msa0025220:CDS
TGAAGACTTAGAAGGCGTAA+CGG 0.598405 1_1:-48247357 None:intergenic
GACAACTCGTCAAAAGGAGA+TGG 0.599038 1_1:+48245370 Msa0025220:CDS
GAGGCTTTAACAATTTAAGC+GGG 0.600751 1_1:+48247539 Msa0025220:exon
TTGATATCGTTGTGCTTGAG+TGG 0.601464 1_1:-48247189 None:intergenic
AACTCGTCAAAAGGAGATGG+TGG 0.603142 1_1:+48245373 Msa0025220:CDS
ACGTGTTTGCGCAGATGCGG+AGG 0.605934 1_1:+48247244 Msa0025220:CDS
ATCCCAACAGTCAGCTTATG+CGG 0.606153 1_1:+48246667 Msa0025220:CDS
CTTCAAATACTATTATGAGG+AGG 0.607664 1_1:+48246752 Msa0025220:CDS
AGAACTGGACTGTCACATGT+TGG 0.620791 1_1:-48245029 None:intergenic
AGAACATCTTATGAAGCGAT+GGG 0.621635 1_1:+48245284 Msa0025220:CDS
AGCCACTTAAAGTCCGAAGT+AGG 0.621799 1_1:-48246405 None:intergenic
GGGTCAAGGAGTTGGAGGCA+CGG 0.624321 1_1:+48245304 Msa0025220:CDS
TGAGGCTTTAACAATTTAAG+CGG 0.627823 1_1:+48247538 Msa0025220:exon
ATTATGATCTTCAAACCTTG+GGG 0.630358 1_1:-48246919 None:intergenic
GGTCTTTGCTCATGGCACAT+GGG 0.639768 1_1:+48246240 Msa0025220:CDS
TTTAGTGCCAACATTCATGG+TGG 0.641441 1_1:-48247162 None:intergenic
CATTATGGTTCAGAGAATGA+GGG 0.643278 1_1:+48246590 Msa0025220:CDS
GATTTCAGCTTATCGACAGA+CGG 0.644926 1_1:-48247140 None:intergenic
TGAATAAATGAAAAGCAAGA+TGG 0.655697 1_1:-48246711 None:intergenic
GCATCTGAAATATTTCTCAA+CGG 0.661104 1_1:+48247266 Msa0025220:CDS
CATGTCGACATAAGAAACCC+CGG 0.663279 1_1:-48247016 None:intergenic
TGTCGTATGTTTGAGAACCG+GGG 0.673760 1_1:+48246999 Msa0025220:CDS
ATGTTGATAATGATAATGAG+AGG 0.683310 1_1:+48246850 Msa0025220:CDS
TCAAACCATATACACAGACC+AGG 0.683597 1_1:+48246167 Msa0025220:CDS
TGTTGATAATGATAATGAGA+GGG 0.689129 1_1:+48246851 Msa0025220:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTTATGTTATAAGTT+AGG + chr1_1:48247569-48247588 Msa0025220:three_prime_UTR 10.0%
!! TTTAATTATGCATATAACAC+TGG + chr1_1:48244873-48244892 Msa0025220:CDS 20.0%
!! CAATTCACAAAATAAGAAAT+CGG + chr1_1:48244929-48244948 Msa0025220:CDS 20.0%
!! ATGTCTATAAGATATATAAG+TGG + chr1_1:48245138-48245157 Msa0025220:CDS 20.0%
!! TGTCTATAAGATATATAAGT+GGG + chr1_1:48245139-48245158 Msa0025220:CDS 20.0%
!!! TGAATGTTTATATTGATTGA+AGG + chr1_1:48245728-48245747 Msa0025220:intron 20.0%
!!! AATTTAATGTTCTGGTTTAT+GGG + chr1_1:48245756-48245775 Msa0025220:intron 20.0%
!!! ATGATGAAAAACTGTTTTAA+TGG + chr1_1:48246378-48246397 Msa0025220:CDS 20.0%
!! AATTCTTGATTGTTATGTAT+TGG + chr1_1:48247667-48247686 Msa0025220:three_prime_UTR 20.0%
! TGAAAATTCAGTTATTGATG+CGG + chr1_1:48244764-48244783 Msa0025220:CDS 25.0%
! CATTTAGTGATAAAGAATCA+TGG + chr1_1:48244805-48244824 Msa0025220:CDS 25.0%
!!! CTTATTTTGTGAATTGTTCT+TGG - chr1_1:48244925-48244944 None:intergenic 25.0%
! ACAAAATAAGAAATCGGATA+AGG + chr1_1:48244935-48244954 Msa0025220:CDS 25.0%
!!! GCTTTAATAAATTCTAAAGC+TGG + chr1_1:48245251-48245270 Msa0025220:CDS 25.0%
! ACCGAACAAACAATAAATAT+CGG + chr1_1:48245573-48245592 Msa0025220:CDS 25.0%
! AGTACAAAATACTAACCTAA+TGG - chr1_1:48245599-48245618 None:intergenic 25.0%
! TGAAATTTGAATGAATGTTC+TGG + chr1_1:48245646-48245665 Msa0025220:intron 25.0%
!! AGGTTTAGAATTTAATGTTC+TGG + chr1_1:48245748-48245767 Msa0025220:intron 25.0%
!!! GAATTTAATGTTCTGGTTTA+TGG + chr1_1:48245755-48245774 Msa0025220:intron 25.0%
!! TGTTGTATTTTGTTCTGATT+TGG + chr1_1:48246004-48246023 Msa0025220:intron 25.0%
! AAAACACCTTGAAAAACATT+CGG - chr1_1:48246216-48246235 None:intergenic 25.0%
! TTTCGATGAGTTAACTAATT+TGG + chr1_1:48246308-48246327 Msa0025220:CDS 25.0%
!!! TGAAAAACTGTTTTAATGGA+AGG + chr1_1:48246382-48246401 Msa0025220:CDS 25.0%
! CTTTAGTCATTTCAACATTA+TGG + chr1_1:48246575-48246594 Msa0025220:CDS 25.0%
! TGAATAAATGAAAAGCAAGA+TGG - chr1_1:48246714-48246733 None:intergenic 25.0%
! CATAATAGTATTTGAAGGAA+AGG - chr1_1:48246749-48246768 None:intergenic 25.0%
! TTCCTTCAAATACTATTATG+AGG + chr1_1:48246749-48246768 Msa0025220:CDS 25.0%
!! CAAAGTTTTCACAATTGAAA+AGG + chr1_1:48246809-48246828 Msa0025220:CDS 25.0%
!!! ATGTTGATAATGATAATGAG+AGG + chr1_1:48246850-48246869 Msa0025220:CDS 25.0%
!!! TGTTGATAATGATAATGAGA+GGG + chr1_1:48246851-48246870 Msa0025220:CDS 25.0%
ATATTAACTTCATCTGAGAG+TGG + chr1_1:48244729-48244748 Msa0025220:CDS 30.0%
TAAAGAATCATGGAAGTCTT+TGG + chr1_1:48244815-48244834 Msa0025220:CDS 30.0%
TAACAAAGAAGGTTTCAAGA+AGG + chr1_1:48244980-48244999 Msa0025220:CDS 30.0%
AACAAAGAAGGTTTCAAGAA+GGG + chr1_1:48244981-48245000 Msa0025220:CDS 30.0%
TAAAGAAAAACCAGAGGAAA+GGG + chr1_1:48245070-48245089 Msa0025220:CDS 30.0%
! AGCTGGAATATATTTGAAGT+TGG + chr1_1:48245103-48245122 Msa0025220:CDS 30.0%
! AAATGCTCTGGTTTATGTAA+TGG - chr1_1:48245182-48245201 None:intergenic 30.0%
! GAATCTTCCTTTTCGATTTT+CGG + chr1_1:48245328-48245347 Msa0025220:CDS 30.0%
TTTAAGTCCGAAAATCGAAA+AGG - chr1_1:48245338-48245357 None:intergenic 30.0%
TGGATATCATAGTAAAAACC+TGG - chr1_1:48245452-48245471 None:intergenic 30.0%
!!! AAGACATAGCCAGTATTTTT+TGG + chr1_1:48245486-48245505 Msa0025220:CDS 30.0%
!!! AGACATAGCCAGTATTTTTT+GGG + chr1_1:48245487-48245506 Msa0025220:CDS 30.0%
CAACAAGATTATGCTCTATT+TGG + chr1_1:48245524-48245543 Msa0025220:CDS 30.0%
GCCGATATTTATTGTTTGTT+CGG - chr1_1:48245577-48245596 None:intergenic 30.0%
AACAATAAATATCGGCCATT+AGG + chr1_1:48245581-48245600 Msa0025220:CDS 30.0%
!! ATGTTCTGGTTTAGAATTGA+AGG + chr1_1:48245660-48245679 Msa0025220:intron 30.0%
CTGGTATATGTGTGTTAATT+TGG + chr1_1:48245685-48245704 Msa0025220:intron 30.0%
AAACACATATGATCTTTCCA+TGG - chr1_1:48245819-48245838 None:intergenic 30.0%
TTTCTATTTACACAGCACAA+TGG + chr1_1:48245963-48245982 Msa0025220:intron 30.0%
ATGATTGTCAAAACCAAGAA+AGG - chr1_1:48246043-48246062 None:intergenic 30.0%
! TATGGTTTGAGGTTTCTTAT+TGG - chr1_1:48246157-48246176 None:intergenic 30.0%
! TCAATTCCGAATGTTTTTCA+AGG + chr1_1:48246207-48246226 Msa0025220:CDS 30.0%
!!! GTTTTTCAAGGTGTTTTTCA+TGG + chr1_1:48246219-48246238 Msa0025220:CDS 30.0%
GAGAATGCAAAGAAAAATCT+CGG + chr1_1:48246264-48246283 Msa0025220:CDS 30.0%
AATCAGATTTCGACTACAAT+TGG + chr1_1:48246349-48246368 Msa0025220:CDS 30.0%
ATCAGATTTCGACTACAATT+GGG + chr1_1:48246350-48246369 Msa0025220:CDS 30.0%
TAAAGAATCGAACAAGTGAA+TGG - chr1_1:48246560-48246579 None:intergenic 30.0%
TGGTGTATACTTGTTTACTA+CGG - chr1_1:48246694-48246713 None:intergenic 30.0%
CTCCTCATAATAGTATTTGA+AGG - chr1_1:48246754-48246773 None:intergenic 30.0%
CTTCAAATACTATTATGAGG+AGG + chr1_1:48246752-48246771 Msa0025220:CDS 30.0%
ATTATGATCTTCAAACCTTG+GGG - chr1_1:48246922-48246941 None:intergenic 30.0%
GATTATGATCTTCAAACCTT+GGG - chr1_1:48246923-48246942 None:intergenic 30.0%
!! ATCATAATCGACTTGATGAA+AGG + chr1_1:48246934-48246953 Msa0025220:CDS 30.0%
!! TCATAATCGACTTGATGAAA+GGG + chr1_1:48246935-48246954 Msa0025220:CDS 30.0%
!! TCGACATGTTTTCAAGATTT+TGG + chr1_1:48247031-48247050 Msa0025220:CDS 30.0%
!! ACATGTTTTCAAGATTTTGG+AGG + chr1_1:48247034-48247053 Msa0025220:CDS 30.0%
!!! CTGCACAATATGTTTTAAAG+CGG + chr1_1:48247099-48247118 Msa0025220:CDS 30.0%
! GCATCTGAAATATTTCTCAA+CGG + chr1_1:48247266-48247285 Msa0025220:CDS 30.0%
!! GAGGAGTTTCTTATTTCTAA+AGG + chr1_1:48247314-48247333 Msa0025220:CDS 30.0%
! TTTGGTCTTTCTTTGAACTT+TGG - chr1_1:48247422-48247441 None:intergenic 30.0%
AAGAAAGACCAAATCCAATT+AGG + chr1_1:48247429-48247448 Msa0025220:CDS 30.0%
TTCTTTGACCTAATTGGATT+TGG - chr1_1:48247440-48247459 None:intergenic 30.0%
! TGAGGCTTTAACAATTTAAG+CGG + chr1_1:48247538-48247557 Msa0025220:exon 30.0%
ATAAGTTAGGAAAGATGATG+AGG + chr1_1:48247582-48247601 Msa0025220:three_prime_UTR 30.0%
! TGAGGCTTTAACTAAAAAAG+CGG + chr1_1:48247600-48247619 Msa0025220:three_prime_UTR 30.0%
!!! GTGTTTGTTGCTGTTTTCAA+TGG + chr1_1:48244701-48244720 Msa0025220:exon 35.0%
ATAACACTGGATTCTCTGTT+AGG + chr1_1:48244886-48244905 Msa0025220:CDS 35.0%
CGTTATGCTTGTAACAAAGA+AGG + chr1_1:48244969-48244988 Msa0025220:CDS 35.0%
GTCTGCTTAATCCTAAAAAC+AGG + chr1_1:48245006-48245025 Msa0025220:CDS 35.0%
TTCTCATACTCAACAAGAAC+TGG - chr1_1:48245047-48245066 None:intergenic 35.0%
GAAAGCTAAAGAAAAACCAG+AGG + chr1_1:48245064-48245083 Msa0025220:CDS 35.0%
CTAAAGAAAAACCAGAGGAA+AGG + chr1_1:48245069-48245088 Msa0025220:CDS 35.0%
CGAGAAGTAAATGAAGTTCA+AGG + chr1_1:48245221-48245240 Msa0025220:CDS 35.0%
AGAACATCTTATGAAGCGAT+GGG + chr1_1:48245284-48245303 Msa0025220:CDS 35.0%
TCTAATGACAACTCGTCAAA+AGG + chr1_1:48245364-48245383 Msa0025220:CDS 35.0%
! TGGTTTAGAATTGAAGGTTC+TGG + chr1_1:48245666-48245685 Msa0025220:intron 35.0%
CATAAATTCCAAGGCAAGAT+AGG - chr1_1:48245786-48245805 None:intergenic 35.0%
TGTACAGAGCATAAATTCCA+AGG - chr1_1:48245795-48245814 None:intergenic 35.0%
! CATCGTAAGAGTGTGTTATT+TGG + chr1_1:48246060-48246079 Msa0025220:CDS 35.0%
!!! AGACATCAGCTACTTTTGAT+TGG + chr1_1:48246103-48246122 Msa0025220:CDS 35.0%
! TTTTTCATGGTCTTTGCTCA+TGG + chr1_1:48246232-48246251 Msa0025220:CDS 35.0%
! TTTTAATGGAAGGCCTACTT+CGG + chr1_1:48246392-48246411 Msa0025220:CDS 35.0%
CTCATTCAAATCGTATGCAT+TGG + chr1_1:48246436-48246455 Msa0025220:CDS 35.0%
!! TATGCATTGGTCTTCAGTTT+GGG + chr1_1:48246449-48246468 Msa0025220:CDS 35.0%
! TCTTTCAATGCTTTTCTTCG+TGG + chr1_1:48246519-48246538 Msa0025220:CDS 35.0%
ACATTATGGTTCAGAGAATG+AGG + chr1_1:48246589-48246608 Msa0025220:CDS 35.0%
CATTATGGTTCAGAGAATGA+GGG + chr1_1:48246590-48246609 Msa0025220:CDS 35.0%
! GGTTTCGAATGTTGATGTTT+TGG + chr1_1:48246872-48246891 Msa0025220:CDS 35.0%
CGATTATGATCTTCAAACCT+TGG - chr1_1:48246924-48246943 None:intergenic 35.0%
!! TTCAAGATTTTGGAGGTCTT+AGG + chr1_1:48247041-48247060 Msa0025220:CDS 35.0%
!! CGCTTTAAAACATATTGTGC+AGG - chr1_1:48247101-48247120 None:intergenic 35.0%
!!! CACAATATGTTTTAAAGCGG+TGG + chr1_1:48247102-48247121 Msa0025220:CDS 35.0%
!! ACTGCTTTTGAAGACTTAGA+AGG - chr1_1:48247368-48247387 None:intergenic 35.0%
GACAGAAATTCCTTATAGCT+CGG + chr1_1:48247495-48247514 Msa0025220:CDS 35.0%
GAAGCAAAAGAAAGATGATG+AGG + chr1_1:48247520-48247539 Msa0025220:CDS 35.0%
! GAGGCTTTAACAATTTAAGC+GGG + chr1_1:48247539-48247558 Msa0025220:exon 35.0%
ATCTGAGAGTGGACAATTGA+CGG + chr1_1:48244740-48244759 Msa0025220:CDS 40.0%
!! TCACATGTTGGCCTGTTTTT+AGG - chr1_1:48245020-48245039 None:intergenic 40.0%
GAGAACATCTTATGAAGCGA+TGG + chr1_1:48245283-48245302 Msa0025220:CDS 40.0%
TCCATCTGCCCAAAAAATAC+TGG - chr1_1:48245498-48245517 None:intergenic 40.0%
ATTTATGCTCTGTACAGCCA+TGG + chr1_1:48245799-48245818 Msa0025220:intron 40.0%
TCCAGCTATGCAAAGATCAT+AGG + chr1_1:48245909-48245928 Msa0025220:intron 40.0%
ACCTATGATCTTTGCATAGC+TGG - chr1_1:48245913-48245932 None:intergenic 40.0%
TTCATTTCAGCTGCCTTTCT+TGG + chr1_1:48246027-48246046 Msa0025220:intron 40.0%
TGGTCTGTGTATATGGTTTG+AGG - chr1_1:48246168-48246187 None:intergenic 40.0%
TCAAACCATATACACAGACC+AGG + chr1_1:48246167-48246186 Msa0025220:CDS 40.0%
!! GTATGCATTGGTCTTCAGTT+TGG + chr1_1:48246448-48246467 Msa0025220:CDS 40.0%
AATCGAACAAGTGAATGGTC+TGG - chr1_1:48246555-48246574 None:intergenic 40.0%
! TCATGCTGAGTTGGACTTTA+AGG + chr1_1:48246617-48246636 Msa0025220:CDS 40.0%
TATGAGGAGGACACAACAAA+AGG + chr1_1:48246765-48246784 Msa0025220:CDS 40.0%
ATGAGGAGGACACAACAAAA+GGG + chr1_1:48246766-48246785 Msa0025220:CDS 40.0%
TTGAAGAAAACCTTTCCCCA+AGG + chr1_1:48246904-48246923 Msa0025220:CDS 40.0%
CATGTCGTATGTTTGAGAAC+CGG + chr1_1:48246997-48247016 Msa0025220:CDS 40.0%
ATGTCGTATGTTTGAGAACC+GGG + chr1_1:48246998-48247017 Msa0025220:CDS 40.0%
!! AAGATTTTGGAGGTCTTAGG+TGG + chr1_1:48247044-48247063 Msa0025220:CDS 40.0%
GATTTCAGCTTATCGACAGA+CGG - chr1_1:48247143-48247162 None:intergenic 40.0%
CTGAAATCCACCATGAATGT+TGG + chr1_1:48247155-48247174 Msa0025220:CDS 40.0%
TTTAGTGCCAACATTCATGG+TGG - chr1_1:48247165-48247184 None:intergenic 40.0%
GTCTTTAGTGCCAACATTCA+TGG - chr1_1:48247168-48247187 None:intergenic 40.0%
TTGATATCGTTGTGCTTGAG+TGG - chr1_1:48247192-48247211 None:intergenic 40.0%
ATTTCTCAACGGTGTTCTTG+AGG + chr1_1:48247277-48247296 Msa0025220:CDS 40.0%
! TGAAGACTTAGAAGGCGTAA+CGG - chr1_1:48247360-48247379 None:intergenic 40.0%
CTGTCTATGAACCATCTGTT+GGG + chr1_1:48247390-48247409 Msa0025220:CDS 40.0%
AGTCGCTTCTTTGACCTAAT+TGG - chr1_1:48247446-48247465 None:intergenic 40.0%
TTTGCTTCTTCCGAGCTATA+AGG - chr1_1:48247508-48247527 None:intergenic 40.0%
AGAACTGGACTGTCACATGT+TGG - chr1_1:48245032-48245051 None:intergenic 45.0%
GAAAAACCAGAGGAAAGGGT+TGG + chr1_1:48245074-48245093 Msa0025220:CDS 45.0%
TTACAACCAACCCTTTCCTC+TGG - chr1_1:48245083-48245102 None:intergenic 45.0%
!! GAAAGGGTTGGTTGTAAAGC+TGG + chr1_1:48245086-48245105 Msa0025220:CDS 45.0%
CTCAAGTAGCACAAATGCTC+TGG - chr1_1:48245194-48245213 None:intergenic 45.0%
TCTTATGAAGCGATGGGTCA+AGG + chr1_1:48245290-48245309 Msa0025220:CDS 45.0%
GACAACTCGTCAAAAGGAGA+TGG + chr1_1:48245370-48245389 Msa0025220:CDS 45.0%
AACTCGTCAAAAGGAGATGG+TGG + chr1_1:48245373-48245392 Msa0025220:CDS 45.0%
AATGAAGCTCTCTCGAAACC+AGG + chr1_1:48245431-48245450 Msa0025220:CDS 45.0%
TGTCTTCTGCAGCATCAACT+TGG - chr1_1:48245472-48245491 None:intergenic 45.0%
!!! GCCAGTATTTTTTGGGCAGA+TGG + chr1_1:48245494-48245513 Msa0025220:CDS 45.0%
! ACTAGCCTGGTCTGTGTATA+TGG - chr1_1:48246175-48246194 None:intergenic 45.0%
ACTTCAACAATGCACTAGCC+TGG - chr1_1:48246188-48246207 None:intergenic 45.0%
AGCCACTTAAAGTCCGAAGT+AGG - chr1_1:48246408-48246427 None:intergenic 45.0%
!! ATTGGTCTTCAGTTTGGGTG+AGG + chr1_1:48246454-48246473 Msa0025220:CDS 45.0%
! GTGAGGTCACATTTTACAGC+TGG + chr1_1:48246471-48246490 Msa0025220:CDS 45.0%
GAGGGATAATCATGCTGAGT+TGG + chr1_1:48246608-48246627 Msa0025220:CDS 45.0%
ATCCCAACAGTCAGCTTATG+CGG + chr1_1:48246667-48246686 Msa0025220:CDS 45.0%
GATCTTCAAACCTTGGGGAA+AGG - chr1_1:48246917-48246936 None:intergenic 45.0%
TGTCGTATGTTTGAGAACCG+GGG + chr1_1:48246999-48247018 Msa0025220:CDS 45.0%
CATGTCGACATAAGAAACCC+CGG - chr1_1:48247019-48247038 None:intergenic 45.0%
TGTTCTTGAGGCAGGGAAAA+AGG + chr1_1:48247289-48247308 Msa0025220:CDS 45.0%
GCTGTCTATGAACCATCTGT+TGG + chr1_1:48247389-48247408 Msa0025220:CDS 45.0%
TGGGTGATCCTATCTTGCCT+TGG + chr1_1:48245775-48245794 Msa0025220:intron 50.0%
TGGTCTTTGCTCATGGCACA+TGG + chr1_1:48246239-48246258 Msa0025220:CDS 50.0%
GGTCTTTGCTCATGGCACAT+GGG + chr1_1:48246240-48246259 Msa0025220:CDS 50.0%
GGCCTACTTCGGACTTTAAG+TGG + chr1_1:48246403-48246422 Msa0025220:CDS 50.0%
GACCGCATAAGCTGACTGTT+GGG - chr1_1:48246672-48246691 None:intergenic 50.0%
GGGTTGTCACAGTCGACATT+AGG + chr1_1:48246955-48246974 Msa0025220:CDS 50.0%
TACACGTGTTTGCGCAGATG+CGG + chr1_1:48247241-48247260 Msa0025220:CDS 50.0%
TCAACGGTGTTCTTGAGGCA+GGG + chr1_1:48247282-48247301 Msa0025220:CDS 50.0%
! TTTGGTGCAGTCCCAACAGA+TGG - chr1_1:48247404-48247423 None:intergenic 50.0%
GAAGCGATGGGTCAAGGAGT+TGG + chr1_1:48245296-48245315 Msa0025220:CDS 55.0%
! CGTCAAAAGGAGATGGTGGC+TGG + chr1_1:48245377-48245396 Msa0025220:CDS 55.0%
GGACCGCATAAGCTGACTGT+TGG - chr1_1:48246673-48246692 None:intergenic 55.0%
CTCAACGGTGTTCTTGAGGC+AGG + chr1_1:48247281-48247300 Msa0025220:CDS 55.0%
TGAGGCAGGGAAAAAGGCAG+AGG + chr1_1:48247295-48247314 Msa0025220:CDS 55.0%
GCGATGGGTCAAGGAGTTGG+AGG + chr1_1:48245299-48245318 Msa0025220:CDS 60.0%
GGGTCAAGGAGTTGGAGGCA+CGG + chr1_1:48245304-48245323 Msa0025220:CDS 60.0%
ACGTGTTTGCGCAGATGCGG+AGG + chr1_1:48247244-48247263 Msa0025220:CDS 60.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 48244675 48247708 48244675 ID=Msa0025220;Name=Msa0025220
chr1_1 mRNA 48244675 48247708 48244675 ID=Msa0025220-mRNA-1;Parent=Msa0025220;Name=Msa0025220-mRNA-1;_AED=0.00;_eAED=0.00;_QI=45|1|1|1|1|1|2|152|800
chr1_1 exon 48244675 48245602 48244675 ID=Msa0025220-mRNA-1:exon:13814;Parent=Msa0025220-mRNA-1
chr1_1 exon 48246037 48247708 48246037 ID=Msa0025220-mRNA-1:exon:13815;Parent=Msa0025220-mRNA-1
chr1_1 five_prime_UTR 48244675 48244719 48244675 ID=Msa0025220-mRNA-1:five_prime_utr;Parent=Msa0025220-mRNA-1
chr1_1 CDS 48244720 48245602 48244720 ID=Msa0025220-mRNA-1:cds;Parent=Msa0025220-mRNA-1
chr1_1 CDS 48246037 48247556 48246037 ID=Msa0025220-mRNA-1:cds;Parent=Msa0025220-mRNA-1
chr1_1 three_prime_UTR 48247557 48247708 48247557 ID=Msa0025220-mRNA-1:three_prime_utr;Parent=Msa0025220-mRNA-1
Gene Sequence

>Msa0025220

ATGGATTTGATATTAACTTCATCTGAGAGTGGACAATTGACGGTTGAAAATTCAGTTATTGATGCGGATAGTTCTCAATGTTACTCATTTAGTGATAAAGAATCATGGAAGTCTTTGGTCTTTAAATCTATAAAAGAGATTGAAGATTTTTATTTTAATTATGCATATAACACTGGATTCTCTGTTAGGAGTATGTTGAAGTCCAAGAACAATTCACAAAATAAGAAATCGGATAAGGTACATTATGTGCGTTATGCTTGTAACAAAGAAGGTTTCAAGAAGGGAAGTCTGCTTAATCCTAAAAACAGGCCAACATGTGACAGTCCAGTTCTTGTTGAGTATGAGAAAGCTAAAGAAAAACCAGAGGAAAGGGTTGGTTGTAAAGCTGGAATATATTTGAAGTTGGATGAAGCGTTGAATGTCTATAAGATATATAAGTGGGAAGTTGATCACTGTCATCCATTACATAAACCAGAGCATTTGTGCTACTTGAGATCATTTCGAGAAGTAAATGAAGTTCAAGGACAACTTGCTTTAATAAATTCTAAAGCTGGAATGTCGATGAGAACATCTTATGAAGCGATGGGTCAAGGAGTTGGAGGCACGGAGAATCTTCCTTTTCGATTTTCGGACTTAAAGAACTATCTAATGACAACTCGTCAAAAGGAGATGGTGGCTGGTGAAGCAACTGTTATTCAAGAATTCTTTAGAAATGAAGCTCTCTCGAAACCAGGTTTTTACTATGATATCCAAGTTGATGCTGCAGAAGACATAGCCAGTATTTTTTGGGCAGATGGAATTATGCAACAAGATTATGCTCTATTTGGTGATGTTGTCAGTTTTGATACAACTTACCGAACAAACAATAAATATCGGCCATTAGCTGCCTTTCTTGGTTTTGACAATCATCGTAAGAGTGTGTTATTTGGTGCTGCGCTACTGTATGATGAGACATCAGCTACTTTTGATTGGTTGTTTACAACTTTTTTGAAGTGTATGTCCAATAAGAAACCTCAAACCATATACACAGACCAGGCTAGTGCATTGTTGAAGTCAATTCCGAATGTTTTTCAAGGTGTTTTTCATGGTCTTTGCTCATGGCACATGGGAGAGAATGCAAAGAAAAATCTCGGCTCTCGTGCAAACAGTGCATTTTTCGATGAGTTAACTAATTTGGTTTCAAATGTCGAAGATGAATCAGATTTCGACTACAATTGGGATCAGATGATGAAAAACTGTTTTAATGGAAGGCCTACTTCGGACTTTAAGTGGCTTGTTCAAACTCATTCAAATCGTATGCATTGGTCTTCAGTTTGGGTGAGGTCACATTTTACAGCTGGTTTGAAAACGACACAGTTAAGTGAGTCTTTCAATGCTTTTCTTCGTGGATTTTTGCAGCCAGACCATTCACTTGTTCGATTCTTTAGTCATTTCAACATTATGGTTCAGAGAATGAGGGATAATCATGCTGAGTTGGACTTTAAGGCTGCAAACACTAGAACAAAAAATAATTATCCCAACAGTCAGCTTATGCGGTCCGTAGTAAACAAGTATACACCATCTTGCTTTTCATTTATTCACAGTCAGTATGACCTTTCCTTCAAATACTATTATGAGGAGGACACAACAAAAGGGTCTGAATTGAACAAGTTCTTCAAAGTTTTCACAATTGAAAAGGTTGATTATAATTACGATGATGTTGATAATGATAATGAGAGGGTTTCGAATGTTGATGTTTTGGATGCAGAATTTGAAGAAAACCTTTCCCCAAGGTTTGAAGATCATAATCGACTTGATGAAAGGGTTGTCACAGTCGACATTAGGAGCAAAAGTTTTACTTGTTCATGTCGTATGTTTGAGAACCGGGGTTTCTTATGTCGACATGTTTTCAAGATTTTGGAGGTCTTAGGTGGTCATGTGCAATATCATTTTTTGAAGACTATACCTGCACAATATGTTTTAAAGCGGTGGACTAGAGATGTGCGTCCGTCTGTCGATAAGCTGAAATCCACCATGAATGTTGGCACTAAAGACACCACTCAAGCACAACGATATCAACAAATTTGTACTGTTACAGTTCAGCTTTCTACACGTGTTTGCGCAGATGCGGAGGCATCTGAAATATTTCTCAACGGTGTTCTTGAGGCAGGGAAAAAGGCAGAGGAGTTTCTTATTTCTAAAGGTATTCATACAGATCGATCATCCGTTACGCCTTCTAAGTCTTCAAAAGCAGTTGCTGTCTATGAACCATCTGTTGGGACTGCACCAAAGTTCAAAGAAAGACCAAATCCAATTAGGTCAAAGAAGCGACTTAAAAGTGATTATGAAAAAGCTAGAGCAAGACAGAAATTCCTTATAGCTCGGAAGAAGCAAAAGAAAGATGATGAGGCTTTAACAATTTAA
Protein sequence

>Msa0025220

MDLILTSSESGQLTVENSVIDADSSQCYSFSDKESWKSLVFKSIKEIEDFYFNYAYNTGFSVRSMLKSKNNSQNKKSDKVHYVRYACNKEGFKKGSLLNPKNRPTCDSPVLVEYEKAKEKPEERVGCKAGIYLKLDEALNVYKIYKWEVDHCHPLHKPEHLCYLRSFREVNEVQGQLALINSKAGMSMRTSYEAMGQGVGGTENLPFRFSDLKNYLMTTRQKEMVAGEATVIQEFFRNEALSKPGFYYDIQVDAAEDIASIFWADGIMQQDYALFGDVVSFDTTYRTNNKYRPLAAFLGFDNHRKSVLFGAALLYDETSATFDWLFTTFLKCMSNKKPQTIYTDQASALLKSIPNVFQGVFHGLCSWHMGENAKKNLGSRANSAFFDELTNLVSNVEDESDFDYNWDQMMKNCFNGRPTSDFKWLVQTHSNRMHWSSVWVRSHFTAGLKTTQLSESFNAFLRGFLQPDHSLVRFFSHFNIMVQRMRDNHAELDFKAANTRTKNNYPNSQLMRSVVNKYTPSCFSFIHSQYDLSFKYYYEEDTTKGSELNKFFKVFTIEKVDYNYDDVDNDNERVSNVDVLDAEFEENLSPRFEDHNRLDERVVTVDIRSKSFTCSCRMFENRGFLCRHVFKILEVLGGHVQYHFLKTIPAQYVLKRWTRDVRPSVDKLKSTMNVGTKDTTQAQRYQQICTVTVQLSTRVCADAEASEIFLNGVLEAGKKAEEFLISKGIHTDRSSVTPSKSSKAVAVYEPSVGTAPKFKERPNPIRSKKRLKSDYEKARARQKFLIARKKQKKDDEALTI*