AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0031840

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0031840 MtrunA17_Chr1g0190021 98.950 762 8 0 1 762 1 762 0.0 1554
Msa0031840 MtrunA17_Chr7g0274831 71.255 741 206 6 24 762 30 765 0.0 1085
Msa0031840 MtrunA17_Chr1g0186431 55.614 766 322 8 1 758 2 757 0.0 860
Msa0031840 MtrunA17_Chr1g0168161 51.915 757 347 9 8 755 9 757 0.0 770
Msa0031840 MtrunA17_Chr4g0013831 38.286 747 431 17 26 757 3 734 4.10e-160 482
Msa0031840 MtrunA17_Chr7g0269631 38.050 636 361 15 26 643 3 623 8.58e-112 353
Msa0031840 MtrunA17_Chr4g0077091 56.164 73 31 1 687 758 1 73 1.04e-19 84.0
Msa0031840 MtrunA17_Chr8g0377481 33.835 133 78 3 634 758 840 970 4.50e-16 82.8
Msa0031840 MtrunA17_Chr8g0377481 25.595 168 125 0 350 517 371 538 2.61e-12 70.9
Msa0031840 MtrunA17_Chr8g0371601 23.544 395 246 15 360 715 460 837 1.95e-13 74.3
Msa0031840 MtrunA17_Chr8g0371601 31.724 145 74 3 634 757 1028 1168 3.12e-12 70.5
Msa0031840 MtrunA17_Chr3g0122391 34.127 126 72 3 634 751 898 1020 3.37e-13 73.6
Msa0031840 MtrunA17_Chr3g0122391 23.810 168 128 0 350 517 419 586 1.88e-12 71.2
Msa0031840 MtrunA17_Chr8g0392301 25.481 208 152 1 350 554 362 569 4.03e-13 73.2
Msa0031840 MtrunA17_Chr3g0136601 26.531 196 128 5 327 517 331 515 1.90e-11 67.8
Msa0031840 MtrunA17_Chr1g0150511 25.641 195 131 4 327 517 337 521 5.60e-11 66.2
Msa0031840 MtrunA17_Chr5g0405701 24.074 378 231 12 360 698 498 858 6.39e-11 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0031840 AT3G04580.2 59.546 749 288 7 23 760 22 766 0.0 867
Msa0031840 AT3G04580.1 59.546 749 288 7 23 760 22 766 0.0 867
Msa0031840 AT3G23150.1 50.824 789 344 14 1 762 2 773 0.0 732
Msa0031840 AT3G23150.2 52.073 603 259 10 1 587 2 590 0.0 578
Msa0031840 AT1G04310.1 46.698 636 306 10 1 617 2 623 1.04e-178 526
Msa0031840 AT1G04310.2 46.698 636 306 10 1 617 2 623 1.04e-178 526
Msa0031840 AT1G66340.1 40.701 742 410 15 28 755 4 729 6.89e-172 512
Msa0031840 AT2G40940.1 37.914 604 345 15 29 616 3 592 6.10e-112 353
Msa0031840 AT5G35750.1 23.611 360 226 8 351 666 567 921 3.52e-17 87.0
Msa0031840 AT2G01830.5 26.136 176 130 0 350 525 440 615 2.59e-15 80.9
Msa0031840 AT2G01830.1 26.136 176 130 0 350 525 428 603 2.83e-15 80.9
Msa0031840 AT2G01830.4 26.136 176 130 0 350 525 428 603 2.83e-15 80.9
Msa0031840 AT2G01830.6 26.136 176 130 0 350 525 428 603 2.83e-15 80.9
Msa0031840 AT2G01830.3 26.136 176 130 0 350 525 428 603 2.83e-15 80.9
Msa0031840 AT2G01830.2 26.136 176 130 0 350 525 451 626 2.86e-15 80.9
Msa0031840 AT1G27320.1 25.134 187 140 0 331 517 410 596 1.76e-13 75.1
Msa0031840 AT5G10720.1 23.913 322 204 13 327 631 327 624 5.54e-12 70.1

Find 208 sgRNAs with CRISPR-Local

Find 333 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTAAAATCTTGAATTATTTA+TGG 0.143992 1_1:-58656267 None:intergenic
GTTCATCCGCTATCTGTTTA+AGG 0.174700 1_1:-58659892 None:intergenic
GGATATTTCTGAAAATAAAA+AGG 0.202303 1_1:+58657695 Msa0031840:CDS
CCCTCTCCTTCTTAGAATTA+AGG 0.206742 1_1:+58656813 Msa0031840:CDS
TTCAAAATCTGCACTATATA+AGG 0.240830 1_1:-58660098 None:intergenic
TGCGATCTGCTTCATTGATT+TGG 0.246681 1_1:+58656310 Msa0031840:five_prime_UTR
GTTTAAGGAGGATTGGTTTC+CGG 0.254548 1_1:-58659877 None:intergenic
TGTGAATTTGAATAATCTTT+AGG 0.255453 1_1:-58659533 None:intergenic
TTCATCAGGGTTTGAGTGCC+TGG 0.258763 1_1:+58659655 Msa0031840:CDS
CCATGATTGTGGTTGCATTA+TGG 0.269036 1_1:+58660138 Msa0031840:three_prime_UTR
GCTATGATCAAAGGCCAATT+AGG 0.272954 1_1:-58659788 None:intergenic
TGTTGAGCTTTCTAAGGCTT+TGG 0.281832 1_1:+58656987 Msa0031840:CDS
TACTCTTGTTGAGCTTTCTA+AGG 0.286989 1_1:+58656981 Msa0031840:CDS
GCGATCTGCTTCATTGATTT+GGG 0.299830 1_1:+58656311 Msa0031840:five_prime_UTR
TGCACCAAACCCTGAGAGTT+TGG 0.309721 1_1:-58659449 None:intergenic
TTTATGTCTACATACTCAAC+TGG 0.311908 1_1:-58658011 None:intergenic
GGAAATTCAATGGCCCTAAT+TGG 0.315301 1_1:+58659774 Msa0031840:CDS
GGATGCTTACTAGGGAAATT+AGG 0.316546 1_1:+58656926 Msa0031840:CDS
TAAAATCTTGAATTATTTAT+GGG 0.318268 1_1:-58656266 None:intergenic
CAAGTAATTATGCATATTGT+TGG 0.324786 1_1:+58657879 Msa0031840:CDS
CAGATGATGATGGTTTAAAT+AGG 0.325791 1_1:+58659582 Msa0031840:CDS
ATGTTATGCTATACTAGTTT+TGG 0.328451 1_1:+58657308 Msa0031840:CDS
GATTATTCAAATTCACAGTT+TGG 0.328563 1_1:+58659539 Msa0031840:CDS
AGGAAGCTAGTTGGCATGTT+AGG 0.342538 1_1:+58656905 Msa0031840:CDS
AGGCCTGAACAAAAGATTAT+TGG 0.346222 1_1:+58657618 Msa0031840:CDS
ACTTCAAAACCATCCATTTC+AGG 0.357064 1_1:-58659737 None:intergenic
ATTTGCATAATTGTGCTGTT+TGG 0.362682 1_1:+58657010 Msa0031840:CDS
TTCCTTATCTCCAACACATC+AGG 0.366420 1_1:-58657129 None:intergenic
TTCTTCCAGGTTCGGACTCT+AGG 0.375382 1_1:+58657331 Msa0031840:CDS
CTAGTAACAGCAGTTTCATC+AGG 0.380902 1_1:+58659641 Msa0031840:CDS
CAGGTTCGGACTCTAGGGTT+TGG 0.381488 1_1:+58657337 Msa0031840:CDS
CTCGTACTGTGCACCCTCCT+TGG 0.390718 1_1:-58656081 None:intergenic
GGCATGTTAGGATGCTTACT+AGG 0.396870 1_1:+58656917 Msa0031840:CDS
TGGAATTGGGGCAAGAAGTT+GGG 0.397658 1_1:+58656866 Msa0031840:CDS
TCATGAATTGAAATCGGATT+CGG 0.398997 1_1:+58657068 Msa0031840:CDS
TTTGACTCATGAATTGAAAT+CGG 0.399140 1_1:+58657062 Msa0031840:CDS
ATCTGTTGTTTAGTTGAAAC+CGG 0.399989 1_1:-58658074 None:intergenic
GAATCACAACAGTGAATCTA+AGG 0.402957 1_1:+58658109 Msa0031840:CDS
ATGGAATTGGGGCAAGAAGT+TGG 0.404627 1_1:+58656865 Msa0031840:CDS
GTCCGTGGCTCATCACTGTT+TGG 0.407593 1_1:-58657536 None:intergenic
CCCTCAACATGGAATGTAGA+AGG 0.409888 1_1:-58657746 None:intergenic
CATGAATTGAAATCGGATTC+GGG 0.409935 1_1:+58657069 Msa0031840:CDS
AGATAATGCAAGGTAATATA+TGG 0.410537 1_1:+58659420 Msa0031840:intron
AGGCAGAATGTGATGGAATT+GGG 0.410985 1_1:+58656853 Msa0031840:CDS
AGTTGAGGTGGTGGCTGATC+AGG 0.412583 1_1:+58657380 Msa0031840:CDS
GAGGCAGAATGTGATGGAAT+TGG 0.412904 1_1:+58656852 Msa0031840:CDS
ACAAAGTAAAGAAGCTCAAT+TGG 0.414136 1_1:-58656592 None:intergenic
TTGAAGTGGCGGCAAGGATC+AGG 0.415267 1_1:+58659753 Msa0031840:CDS
CCGAATAAGACAATAGGAAA+AGG 0.420368 1_1:-58656152 None:intergenic
GAACGCGATGATGGCTAGCC+AGG 0.422437 1_1:+58657500 Msa0031840:CDS
GCAGCTCCTAGTTTAGATTC+AGG 0.427340 1_1:-58657177 None:intergenic
ATTACCAAACTCTCAGGGTT+TGG 0.429450 1_1:+58659445 Msa0031840:CDS
ATGGATATTACCAAACTCTC+AGG 0.429769 1_1:+58659439 Msa0031840:CDS
AGCATACACACAATCCTTGT+TGG 0.430934 1_1:+58656523 Msa0031840:CDS
CCTTCTACATTCCATGTTGA+GGG 0.431332 1_1:+58657746 Msa0031840:CDS
ATCTCTCTCCTATCATCATT+CGG 0.433427 1_1:-58657036 None:intergenic
ACCTCAACTATCTCCATCTC+TGG 0.436575 1_1:-58657366 None:intergenic
TTGTGTGTGTATCAAGGGTT+TGG 0.438334 1_1:+58657792 Msa0031840:CDS
GAAGAACCGAATAAGACAAT+AGG 0.446043 1_1:-58656158 None:intergenic
CAAACCCTAGAGTCCGAACC+TGG 0.447027 1_1:-58657336 None:intergenic
GGAGCTGCGAGTAGTGGCGG+TGG 0.447178 1_1:+58657192 Msa0031840:CDS
TAAGGAAAACTAAAGGGGTT+AGG 0.448583 1_1:+58657145 Msa0031840:CDS
CAACTAAACAACAGATTGGT+AGG 0.450054 1_1:+58658081 Msa0031840:CDS
CTATGATCAAAGGCCAATTA+GGG 0.451338 1_1:-58659787 None:intergenic
AAAATAGCTTATAGAGAACT+TGG 0.454392 1_1:+58659989 Msa0031840:three_prime_UTR
GAGCTGCGAGTAGTGGCGGT+GGG 0.454704 1_1:+58657193 Msa0031840:CDS
CTGGGTGCTATAAGTGGCTC+TGG 0.456114 1_1:+58659674 Msa0031840:CDS
GAAAGCAATAGTTGAAAAGA+AGG 0.457598 1_1:-58656721 None:intergenic
CTTCTTCTAAAGTTTCAGAT+AGG 0.459490 1_1:+58659482 Msa0031840:CDS
TACAAGTGAGGGTGGTGATA+AGG 0.459678 1_1:+58657953 Msa0031840:CDS
GCTGCGAGTAGTGGCGGTGG+GGG 0.464681 1_1:+58657195 Msa0031840:CDS
TTTGAGACTGTTGCAAAGCT+CGG 0.468072 1_1:-58657476 None:intergenic
TAATTCTCAGTCAGATGAAC+CGG 0.468897 1_1:+58658055 Msa0031840:CDS
TGGAGATAAGGAAAACTAAA+GGG 0.470604 1_1:+58657139 Msa0031840:CDS
CGAGAACCGACGCATGAGAA+AGG 0.471957 1_1:-58657413 None:intergenic
TAATGCAGAAGAGCAAGTTA+AGG 0.472874 1_1:+58659820 Msa0031840:CDS
AGACATTCACATGCCTGAAA+TGG 0.474093 1_1:+58659724 Msa0031840:CDS
TCCTTCTACATTCCATGTTG+AGG 0.474448 1_1:+58657745 Msa0031840:CDS
CAAAGGAGGGACGCCGGAGT+TGG 0.475152 1_1:+58657278 Msa0031840:CDS
CTTCATGTTTCGAATTTCAA+AGG 0.475335 1_1:+58657261 Msa0031840:CDS
AAAGAAGCTACTCGAGAGGC+TGG 0.477400 1_1:+58659613 Msa0031840:CDS
ACCCTGATGTGTTGGAGATA+AGG 0.484829 1_1:+58657127 Msa0031840:CDS
GACTGGGATAATGATGGTTA+TGG 0.486031 1_1:-58660225 None:intergenic
TAGCAGAAGCATAAAGAGTA+AGG 0.489632 1_1:-58656447 None:intergenic
GCTATCTGTTTAAGGAGGAT+TGG 0.490869 1_1:-58659884 None:intergenic
TCATCAGGGTTTGAGTGCCT+GGG 0.491049 1_1:+58659656 Msa0031840:CDS
TCTTCCAGGTTCGGACTCTA+GGG 0.492992 1_1:+58657332 Msa0031840:CDS
AAGTGCTTGTGTGTGTATCA+AGG 0.498129 1_1:+58657786 Msa0031840:CDS
TGGGATTATGAAGAAACAAA+AGG 0.498382 1_1:+58656885 Msa0031840:CDS
TTTGGATGCCGAATGATGAT+AGG 0.501945 1_1:+58657028 Msa0031840:CDS
CGAATAAGACAATAGGAAAA+GGG 0.502350 1_1:-58656151 None:intergenic
TTGAGGCCTGAATCTAAACT+AGG 0.504401 1_1:+58657171 Msa0031840:CDS
TTGGAGATAAGGAAAACTAA+AGG 0.504670 1_1:+58657138 Msa0031840:CDS
TGAGGAATTTAGCAACAGTA+AGG 0.504921 1_1:-58656744 None:intergenic
AGGCCAATGCATTCAGTTGT+GGG 0.505607 1_1:+58657564 Msa0031840:CDS
GTTTCAACTAAACAACAGAT+TGG 0.508391 1_1:+58658077 Msa0031840:CDS
CCCTCACCTTAATTCTAAGA+AGG 0.509242 1_1:-58656819 None:intergenic
CCATAATGCAACCACAATCA+TGG 0.509533 1_1:-58660138 None:intergenic
CTTCAATATGTGCAGGAGGT+TGG 0.515611 1_1:+58658142 Msa0031840:CDS
GAGTTTAGTAAACGATGTAA+TGG 0.515957 1_1:+58657674 Msa0031840:CDS
AACTCTCAGGGTTTGGTGCA+AGG 0.516591 1_1:+58659452 Msa0031840:CDS
GAGTGCCTGGGTGCTATAAG+TGG 0.519942 1_1:+58659668 Msa0031840:CDS
GAGAACCGACGCATGAGAAA+GGG 0.520645 1_1:-58657412 None:intergenic
AGCTGCGAGTAGTGGCGGTG+GGG 0.526864 1_1:+58657194 Msa0031840:CDS
TTTCTTGAGGCAGAATGTGA+TGG 0.526914 1_1:+58656846 Msa0031840:CDS
TGTTGAACACGCGTGACCGA+GGG 0.532022 1_1:+58657907 Msa0031840:CDS
TTTGGAATGACTTCCTAGCC+TGG 0.533192 1_1:-58657518 None:intergenic
TGTGATTGACCCTGATGTGT+TGG 0.534459 1_1:+58657119 Msa0031840:CDS
TATGTGCAGGAGGTTGGTAC+AGG 0.536453 1_1:+58658148 Msa0031840:CDS
GCAAGGATCAGGAAATTCAA+TGG 0.537123 1_1:+58659764 Msa0031840:CDS
CATAATATAGAATTGTAAAA+CGG 0.538369 1_1:+58660282 Msa0031840:three_prime_UTR
GTCTCAAAAGAACGCGATGA+TGG 0.538727 1_1:+58657491 Msa0031840:CDS
GCTATAAGAGCTATGATCAA+AGG 0.539373 1_1:-58659797 None:intergenic
CTCTCTAACAATTGATGATG+CGG 0.539752 1_1:-58656206 None:intergenic
AAAAGATTACGAAAGGAAAG+TGG 0.540084 1_1:-58656127 None:intergenic
CATACCACATAGAACTATGA+AGG 0.542546 1_1:-58656662 None:intergenic
GAGGCCAATGCATTCAGTTG+TGG 0.544582 1_1:+58657563 Msa0031840:CDS
TTGTTGAACACGCGTGACCG+AGG 0.544947 1_1:+58657906 Msa0031840:CDS
TTGTGCTGTGGCCATGATTG+TGG 0.545057 1_1:+58660127 Msa0031840:three_prime_UTR
GACTGTGACTGGGATAATGA+TGG 0.545260 1_1:-58660231 None:intergenic
GGTTTGGACCGCTCCAGAGA+TGG 0.547219 1_1:+58657353 Msa0031840:CDS
CGTAGCCCTTTCTCATGCGT+CGG 0.547320 1_1:+58657407 Msa0031840:CDS
CGATGATGGCTAGCCAGGCT+AGG 0.551491 1_1:+58657505 Msa0031840:CDS
TGCATGCTGGCGGGAATGAA+TGG 0.552639 1_1:+58659848 Msa0031840:CDS
TGAAGAAACAGCAATTTGAA+AGG 0.553269 1_1:-58656631 None:intergenic
TGTTTCAAGAGGGTAATATG+AGG 0.554581 1_1:+58657598 Msa0031840:CDS
AACATGTATCTTTCAAGCGA+TGG 0.555713 1_1:-58659506 None:intergenic
AGTGCTTGTGTGTGTATCAA+GGG 0.557402 1_1:+58657787 Msa0031840:CDS
GCTTGAGCTTCAATATGTGC+AGG 0.557553 1_1:+58658135 Msa0031840:CDS
CGGGAATGAATGGTGTGATC+CGG 0.557866 1_1:+58659858 Msa0031840:CDS
AAGGATAGATGCATGCTGGC+GGG 0.559193 1_1:+58659839 Msa0031840:CDS
ATGTTTCGAATTTCAAAGGA+GGG 0.563184 1_1:+58657265 Msa0031840:CDS
GAATTTCAAAGGAGGGACGC+CGG 0.563898 1_1:+58657272 Msa0031840:CDS
AACACATCAGGGTCAATCAC+AGG 0.564986 1_1:-58657117 None:intergenic
TTTGACAAGGTCGAGGTCCA+AGG 0.566208 1_1:+58656064 Msa0031840:five_prime_UTR
AACATGGAATGTAGAAGGAA+AGG 0.568366 1_1:-58657741 None:intergenic
AAATTCGAAACATGAAGCAT+CGG 0.568829 1_1:-58657255 None:intergenic
TATTCAAATTCACAGTTTGG+AGG 0.570060 1_1:+58659542 Msa0031840:CDS
ATCCCCACAACTGAATGCAT+TGG 0.570182 1_1:-58657567 None:intergenic
CATGTTTCGAATTTCAAAGG+AGG 0.571827 1_1:+58657264 Msa0031840:CDS
GCATGTTAGGATGCTTACTA+GGG 0.572208 1_1:+58656918 Msa0031840:CDS
AGATCGGTCCTACTTCGTGC+AGG 0.573170 1_1:+58659917 Msa0031840:CDS
TGCTCTTGTGTCGTGTGCAA+CGG 0.573831 1_1:+58656768 Msa0031840:CDS
AGAAACAAAAGGAAGCTAGT+TGG 0.575842 1_1:+58656896 Msa0031840:CDS
ACCTTAATTCTAAGAAGGAG+AGG 0.576433 1_1:-58656814 None:intergenic
CATCCGCTATCTGTTTAAGG+AGG 0.578763 1_1:-58659889 None:intergenic
ATTCACATGCCTGAAATGGA+TGG 0.579300 1_1:+58659728 Msa0031840:CDS
CCTTAATTCTAAGAAGGAGA+GGG 0.581303 1_1:-58656813 None:intergenic
TCCTTCTTAGAATTAAGGTG+AGG 0.582740 1_1:+58656818 Msa0031840:CDS
CCTTCTTAGAATTAAGGTGA+GGG 0.583317 1_1:+58656819 Msa0031840:CDS
TCCTTATCTCCAACACATCA+GGG 0.586059 1_1:-58657128 None:intergenic
AAACTAGGAGCTGCGAGTAG+TGG 0.589890 1_1:+58657186 Msa0031840:CDS
AACTATCTCCATCTCTGGAG+CGG 0.592322 1_1:-58657361 None:intergenic
TGAGGAGTTGGGTGCTGTCG+CGG 0.592472 1_1:+58657221 Msa0031840:CDS
AGTTAAGGATAGATGCATGC+TGG 0.596809 1_1:+58659835 Msa0031840:CDS
CGAAAGGAAAGTGGGTCCCA+CGG 0.597145 1_1:-58656118 None:intergenic
AAGGTTTCATCTCTAACTGA+AGG 0.599231 1_1:-58657722 None:intergenic
TGGATATTACCAAACTCTCA+GGG 0.599355 1_1:+58659440 Msa0031840:CDS
CAGTGATGAGCCACGGACTG+AGG 0.602421 1_1:+58657541 Msa0031840:CDS
GGAGATAAGGAAAACTAAAG+GGG 0.605752 1_1:+58657140 Msa0031840:CDS
ATGCTTTCATTGTTTCAAGA+GGG 0.605913 1_1:+58657588 Msa0031840:CDS
AAGAAGCTACTCGAGAGGCT+GGG 0.610653 1_1:+58659614 Msa0031840:CDS
GGTGCTATAAGTGGCTCTGG+TGG 0.610827 1_1:+58659677 Msa0031840:CDS
CAAGGAGGGTGCACAGTACG+AGG 0.610886 1_1:+58656082 Msa0031840:five_prime_UTR
TAGTAACAGCAGTTTCATCA+GGG 0.611000 1_1:+58659642 Msa0031840:CDS
ATAGCCTTCATAGTTCTATG+TGG 0.611293 1_1:+58656658 Msa0031840:CDS
AATATTATGCAGATAATGCA+AGG 0.612560 1_1:+58659410 Msa0031840:intron
AGGTAAATCTGCAACTCCGT+GGG 0.612678 1_1:+58656102 Msa0031840:five_prime_UTR
GATAGCGGATGAACTTAGAT+CGG 0.618630 1_1:+58659901 Msa0031840:CDS
CTAGGAGCTGCGAGTAGTGG+CGG 0.620654 1_1:+58657189 Msa0031840:CDS
GAGGAATTTAGCAACAGTAA+GGG 0.621503 1_1:-58656743 None:intergenic
GATGCTTTCATTGTTTCAAG+AGG 0.621734 1_1:+58657587 Msa0031840:CDS
GCATTGGCCTCCTCAGTCCG+TGG 0.621785 1_1:-58657551 None:intergenic
AAAGATTACGAAAGGAAAGT+GGG 0.622654 1_1:-58656126 None:intergenic
GATGGAGATAGTTGAGGTGG+TGG 0.622877 1_1:+58657371 Msa0031840:CDS
TCACAACAGTGAATCTAAGG+AGG 0.625084 1_1:+58658112 Msa0031840:CDS
TTCCAAACAGTGATGAGCCA+CGG 0.627516 1_1:+58657534 Msa0031840:CDS
GCAAGCGGCTTCCCTCAACA+TGG 0.629945 1_1:-58657757 None:intergenic
CAAGCACTTAGCAATGCAAG+CGG 0.631343 1_1:-58657772 None:intergenic
TGAGCTTCAATATGTGCAGG+AGG 0.634366 1_1:+58658138 Msa0031840:CDS
TAAGGATAGATGCATGCTGG+CGG 0.634959 1_1:+58659838 Msa0031840:CDS
TGATGAGCCACGGACTGAGG+AGG 0.639305 1_1:+58657544 Msa0031840:CDS
CATCTGCTAACAAAATCTTG+AGG 0.639869 1_1:-58659565 None:intergenic
CTAAGAAGGAGAGGGATCAA+CGG 0.639905 1_1:-58656805 None:intergenic
TAACATGTATCAACCAACTC+CGG 0.640709 1_1:-58657291 None:intergenic
CACAACAGTGAATCTAAGGA+GGG 0.640846 1_1:+58658113 Msa0031840:CDS
TCCAGAGATGGAGATAGTTG+AGG 0.641469 1_1:+58657365 Msa0031840:CDS
GGCCAATGCATTCAGTTGTG+GGG 0.642247 1_1:+58657565 Msa0031840:CDS
TTTGAATTGTGATTGTGCTG+TGG 0.646122 1_1:+58660115 Msa0031840:three_prime_UTR
ACAAGGTCGAGGTCCAAGGA+GGG 0.648407 1_1:+58656068 Msa0031840:five_prime_UTR
AGAGATGGAGATAGTTGAGG+TGG 0.648766 1_1:+58657368 Msa0031840:CDS
GGCAGAATGTGATGGAATTG+GGG 0.651385 1_1:+58656854 Msa0031840:CDS
TTATGTCTACATACTCAACT+GGG 0.652246 1_1:-58658010 None:intergenic
GAGGTAAATCTGCAACTCCG+TGG 0.656593 1_1:+58656101 Msa0031840:five_prime_UTR
CGACGCATGAGAAAGGGCTA+CGG 0.657006 1_1:-58657406 None:intergenic
ATAGTACTTTGACAAGGTCG+AGG 0.657415 1_1:+58656057 Msa0031840:five_prime_UTR
TGAGGTGGTGGCTGATCAGG+TGG 0.658305 1_1:+58657383 Msa0031840:CDS
GGTGACACGATGTTGAAAGT+CGG 0.658823 1_1:+58657639 Msa0031840:CDS
AATCCTCCTTAAACAGATAG+CGG 0.659054 1_1:+58659886 Msa0031840:CDS
CTAAACAACAGATTGGTAGG+AGG 0.670058 1_1:+58658084 Msa0031840:CDS
CCACTGTAACTGTGATGATG+AGG 0.670665 1_1:+58656489 Msa0031840:CDS
GACAAGGTCGAGGTCCAAGG+AGG 0.676347 1_1:+58656067 Msa0031840:five_prime_UTR
CCTCATCATCACAGTTACAG+TGG 0.677470 1_1:-58656489 None:intergenic
CAGAGCCACTTATAGCACCC+AGG 0.678501 1_1:-58659673 None:intergenic
TGACAAAGAAGCTACTCGAG+AGG 0.707649 1_1:+58659609 Msa0031840:CDS
AGAAGGAGAGGGATCAACGG+CGG 0.710786 1_1:-58656802 None:intergenic
ATGAACATAGTACTTTGACA+AGG 0.749739 1_1:+58656051 Msa0031840:five_prime_UTR
CACACGACACAAGAGCAGTG+AGG 0.767368 1_1:-58656762 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAAATCTTGAATTATTTAT+GGG - chr1_1:58656269-58656288 None:intergenic 10.0%
!! TTAAAATCTTGAATTATTTA+TGG - chr1_1:58656270-58656289 None:intergenic 10.0%
!! TGATTACTTATATTTAAAAA+GGG + chr1_1:58658448-58658467 Msa0031840:intron 10.0%
!!! TTTTTAATGTTAAAAGATTT+AGG - chr1_1:58658724-58658743 None:intergenic 10.0%
!!! GATATTTCTGAAAATAAAAA+GGG + chr1_1:58657696-58657715 Msa0031840:CDS 15.0%
!! CTGATTACTTATATTTAAAA+AGG + chr1_1:58658447-58658466 Msa0031840:intron 15.0%
!! TAGTGCTTTAATAAAATAAT+TGG - chr1_1:58659238-58659257 None:intergenic 15.0%
!!! ATTTTATTAAAGCACTATTA+TGG + chr1_1:58659241-58659260 Msa0031840:intron 15.0%
!! ATTAATTAAATAATTACCCA+GGG - chr1_1:58659344-58659363 None:intergenic 15.0%
!! GGTAATTATTTAATTAATCA+TGG + chr1_1:58659346-58659365 Msa0031840:intron 15.0%
!! CATAATATAGAATTGTAAAA+CGG + chr1_1:58660282-58660301 Msa0031840:three_prime_UTR 15.0%
!!! TAATTCAAGATTTTAAGAAC+TGG + chr1_1:58656274-58656293 Msa0031840:five_prime_UTR 20.0%
!!! AATTCAAGATTTTAAGAACT+GGG + chr1_1:58656275-58656294 Msa0031840:five_prime_UTR 20.0%
!!! GGATATTTCTGAAAATAAAA+AGG + chr1_1:58657695-58657714 Msa0031840:CDS 20.0%
!!! AAATTTGATTTTCAGATTAC+TGG + chr1_1:58658032-58658051 Msa0031840:CDS 20.0%
!!! AATTTTACATCCTTAATGAA+TGG - chr1_1:58658394-58658413 None:intergenic 20.0%
!! ATTATGAGTATAAAGAAGTA+AGG - chr1_1:58659210-58659229 None:intergenic 20.0%
!! GATTAATTAAATAATTACCC+AGG - chr1_1:58659345-58659364 None:intergenic 20.0%
!! TGTGAATTTGAATAATCTTT+AGG - chr1_1:58659536-58659555 None:intergenic 20.0%
!!! AGTGACTATTTTTAAACAAT+TGG - chr1_1:58660029-58660048 None:intergenic 20.0%
! TTTGACTCATGAATTGAAAT+CGG + chr1_1:58657062-58657081 Msa0031840:CDS 25.0%
!!! ATGTTATGCTATACTAGTTT+TGG + chr1_1:58657308-58657327 Msa0031840:CDS 25.0%
!! ATTTCTGAAAATAAAAAGGG+TGG + chr1_1:58657699-58657718 Msa0031840:CDS 25.0%
! CAAGTAATTATGCATATTGT+TGG + chr1_1:58657879-58657898 Msa0031840:CDS 25.0%
! GATAAGGATGACAAAAAATT+TGG + chr1_1:58657969-58657988 Msa0031840:CDS 25.0%
!!! ATGACAAAAAATTTGGTGTT+TGG + chr1_1:58657976-58657995 Msa0031840:CDS 25.0%
! AGATATAACATAGACAATCA+AGG - chr1_1:58658216-58658235 None:intergenic 25.0%
! TTTCTTCAAACCATTCATTA+AGG + chr1_1:58658381-58658400 Msa0031840:intron 25.0%
! TGTGATACTGTTAAGATAAA+AGG - chr1_1:58658782-58658801 None:intergenic 25.0%
!! TAATTTTGCTTTCCTCTTTT+AGG + chr1_1:58658874-58658893 Msa0031840:intron 25.0%
!! TCCTACTTTATCAGATTTTA+AGG - chr1_1:58659187-58659206 None:intergenic 25.0%
!! TTCTGACTTTATTTACATTG+TGG + chr1_1:58659387-58659406 Msa0031840:intron 25.0%
! AATATTATGCAGATAATGCA+AGG + chr1_1:58659410-58659429 Msa0031840:intron 25.0%
! AGATAATGCAAGGTAATATA+TGG + chr1_1:58659420-58659439 Msa0031840:intron 25.0%
! GATTATTCAAATTCACAGTT+TGG + chr1_1:58659539-58659558 Msa0031840:CDS 25.0%
! AAAATAGCTTATAGAGAACT+TGG + chr1_1:58659989-58660008 Msa0031840:three_prime_UTR 25.0%
! TTCAAAATCTGCACTATATA+AGG - chr1_1:58660101-58660120 None:intergenic 25.0%
ATGAACATAGTACTTTGACA+AGG + chr1_1:58656051-58656070 Msa0031840:five_prime_UTR 30.0%
AAAGATTACGAAAGGAAAGT+GGG - chr1_1:58656129-58656148 None:intergenic 30.0%
AAAAGATTACGAAAGGAAAG+TGG - chr1_1:58656130-58656149 None:intergenic 30.0%
AAAGGGAAAAAGATTACGAA+AGG - chr1_1:58656137-58656156 None:intergenic 30.0%
CGAATAAGACAATAGGAAAA+GGG - chr1_1:58656154-58656173 None:intergenic 30.0%
!! CCTTTTCCTATTGTCTTATT+CGG + chr1_1:58656152-58656171 Msa0031840:five_prime_UTR 30.0%
!! ATTTGGGTCATTTTCTAATC+AGG + chr1_1:58656327-58656346 Msa0031840:five_prime_UTR 30.0%
ACAAAGTAAAGAAGCTCAAT+TGG - chr1_1:58656595-58656614 None:intergenic 30.0%
TGAAGAAACAGCAATTTGAA+AGG - chr1_1:58656634-58656653 None:intergenic 30.0%
GAAAGCAATAGTTGAAAAGA+AGG - chr1_1:58656724-58656743 None:intergenic 30.0%
TGGGATTATGAAGAAACAAA+AGG + chr1_1:58656885-58656904 Msa0031840:CDS 30.0%
! ATTTGCATAATTGTGCTGTT+TGG + chr1_1:58657010-58657029 Msa0031840:CDS 30.0%
TCATGAATTGAAATCGGATT+CGG + chr1_1:58657068-58657087 Msa0031840:CDS 30.0%
TTGGAGATAAGGAAAACTAA+AGG + chr1_1:58657138-58657157 Msa0031840:CDS 30.0%
TGGAGATAAGGAAAACTAAA+GGG + chr1_1:58657139-58657158 Msa0031840:CDS 30.0%
AAATTCGAAACATGAAGCAT+CGG - chr1_1:58657258-58657277 None:intergenic 30.0%
CTTCATGTTTCGAATTTCAA+AGG + chr1_1:58657261-58657280 Msa0031840:CDS 30.0%
ATGTTTCGAATTTCAAAGGA+GGG + chr1_1:58657265-58657284 Msa0031840:CDS 30.0%
ATGCTTTCATTGTTTCAAGA+GGG + chr1_1:58657588-58657607 Msa0031840:CDS 30.0%
! TCACCAATAATCTTTTGTTC+AGG - chr1_1:58657624-58657643 None:intergenic 30.0%
GAGTTTAGTAAACGATGTAA+TGG + chr1_1:58657674-58657693 Msa0031840:CDS 30.0%
! TCTTTGCCTGAAAAAGTTTT+AGG + chr1_1:58657837-58657856 Msa0031840:CDS 30.0%
TTATGTCTACATACTCAACT+GGG - chr1_1:58658013-58658032 None:intergenic 30.0%
TTTATGTCTACATACTCAAC+TGG - chr1_1:58658014-58658033 None:intergenic 30.0%
! ATCTGTTGTTTAGTTGAAAC+CGG - chr1_1:58658077-58658096 None:intergenic 30.0%
GTTTCAACTAAACAACAGAT+TGG + chr1_1:58658077-58658096 Msa0031840:CDS 30.0%
AATGCTTAAAGAATGCTGTT+TGG + chr1_1:58658269-58658288 Msa0031840:intron 30.0%
! ACAACAGATTAGTTATTGGT+CGG - chr1_1:58658509-58658528 None:intergenic 30.0%
ACCAATAACTAATCTGTTGT+AGG + chr1_1:58658509-58658528 Msa0031840:intron 30.0%
! AAGAAACTGATTCCATGAAT+CGG + chr1_1:58658552-58658571 Msa0031840:intron 30.0%
TATCAGTGAAAAAAAGAGTC+TGG - chr1_1:58658623-58658642 None:intergenic 30.0%
! GATTTAGGTTATAACAGAAG+AGG - chr1_1:58658709-58658728 None:intergenic 30.0%
! GTGTCTTTTCTTGAATTGTA+AGG + chr1_1:58658994-58659013 Msa0031840:intron 30.0%
! AAAAGCACAAGCTTTCTTAT+TGG - chr1_1:58659100-58659119 None:intergenic 30.0%
! ATAAGAAAGCTTGTGCTTTT+TGG + chr1_1:58659100-58659119 Msa0031840:intron 30.0%
!! TAAGAAAGCTTGTGCTTTTT+GGG + chr1_1:58659101-58659120 Msa0031840:intron 30.0%
!!! AGATTTTAAGGCACAAAAGA+TGG - chr1_1:58659175-58659194 None:intergenic 30.0%
GCCTTAAAATCTGATAAAGT+AGG + chr1_1:58659183-58659202 Msa0031840:intron 30.0%
! GAATAACAAGTTCTGATTTG+TGG - chr1_1:58659282-58659301 None:intergenic 30.0%
!! CTTCTTCTAAAGTTTCAGAT+AGG + chr1_1:58659482-58659501 Msa0031840:CDS 30.0%
TATTCAAATTCACAGTTTGG+AGG + chr1_1:58659542-58659561 Msa0031840:CDS 30.0%
! ATTTTGTTAGCAGATGATGA+TGG + chr1_1:58659572-58659591 Msa0031840:CDS 30.0%
!! CAGATGATGATGGTTTAAAT+AGG + chr1_1:58659582-58659601 Msa0031840:CDS 30.0%
!! GTTCTCTATAAGCTATTTTG+AGG - chr1_1:58659988-58660007 None:intergenic 30.0%
! TCTTTTGTCACAACTTATTG+TGG + chr1_1:58660075-58660094 Msa0031840:three_prime_UTR 30.0%
!!! TGTAAAACGGTGCTTTTTTA+AGG + chr1_1:58660295-58660314 Msa0031840:three_prime_UTR 30.0%
CCGAATAAGACAATAGGAAA+AGG - chr1_1:58656155-58656174 None:intergenic 35.0%
GAAGAACCGAATAAGACAAT+AGG - chr1_1:58656161-58656180 None:intergenic 35.0%
!! CTCTCTAACAATTGATGATG+CGG - chr1_1:58656209-58656228 None:intergenic 35.0%
! TAGCAGAAGCATAAAGAGTA+AGG - chr1_1:58656450-58656469 None:intergenic 35.0%
! ATAGCCTTCATAGTTCTATG+TGG + chr1_1:58656658-58656677 Msa0031840:CDS 35.0%
CATACCACATAGAACTATGA+AGG - chr1_1:58656665-58656684 None:intergenic 35.0%
GAGGAATTTAGCAACAGTAA+GGG - chr1_1:58656746-58656765 None:intergenic 35.0%
TGAGGAATTTAGCAACAGTA+AGG - chr1_1:58656747-58656766 None:intergenic 35.0%
! CCTTAATTCTAAGAAGGAGA+GGG - chr1_1:58656816-58656835 None:intergenic 35.0%
! ACCTTAATTCTAAGAAGGAG+AGG - chr1_1:58656817-58656836 None:intergenic 35.0%
TCCTTCTTAGAATTAAGGTG+AGG + chr1_1:58656818-58656837 Msa0031840:CDS 35.0%
CCTTCTTAGAATTAAGGTGA+GGG + chr1_1:58656819-58656838 Msa0031840:CDS 35.0%
AGAAACAAAAGGAAGCTAGT+TGG + chr1_1:58656896-58656915 Msa0031840:CDS 35.0%
TACTCTTGTTGAGCTTTCTA+AGG + chr1_1:58656981-58657000 Msa0031840:CDS 35.0%
ATCTCTCTCCTATCATCATT+CGG - chr1_1:58657039-58657058 None:intergenic 35.0%
CATGAATTGAAATCGGATTC+GGG + chr1_1:58657069-58657088 Msa0031840:CDS 35.0%
GGAGATAAGGAAAACTAAAG+GGG + chr1_1:58657140-58657159 Msa0031840:CDS 35.0%
TAAGGAAAACTAAAGGGGTT+AGG + chr1_1:58657145-58657164 Msa0031840:CDS 35.0%
CATGTTTCGAATTTCAAAGG+AGG + chr1_1:58657264-58657283 Msa0031840:CDS 35.0%
TAACATGTATCAACCAACTC+CGG - chr1_1:58657294-58657313 None:intergenic 35.0%
!!! ATACTAGTTTTGGTTCTTCC+AGG + chr1_1:58657318-58657337 Msa0031840:CDS 35.0%
GATGCTTTCATTGTTTCAAG+AGG + chr1_1:58657587-58657606 Msa0031840:CDS 35.0%
TGTTTCAAGAGGGTAATATG+AGG + chr1_1:58657598-58657617 Msa0031840:CDS 35.0%
AGGCCTGAACAAAAGATTAT+TGG + chr1_1:58657618-58657637 Msa0031840:CDS 35.0%
AAGGTTTCATCTCTAACTGA+AGG - chr1_1:58657725-58657744 None:intergenic 35.0%
AACATGGAATGTAGAAGGAA+AGG - chr1_1:58657744-58657763 None:intergenic 35.0%
TAATTCTCAGTCAGATGAAC+CGG + chr1_1:58658055-58658074 Msa0031840:CDS 35.0%
CAACTAAACAACAGATTGGT+AGG + chr1_1:58658081-58658100 Msa0031840:CDS 35.0%
GAATCACAACAGTGAATCTA+AGG + chr1_1:58658109-58658128 Msa0031840:CDS 35.0%
ACATGTACCTCATATGAGAT+CGG - chr1_1:58658480-58658499 None:intergenic 35.0%
! GCCTACAACAGATTAGTTAT+TGG - chr1_1:58658513-58658532 None:intergenic 35.0%
ATCAGTTTCTTGCAATTGCA+AGG - chr1_1:58658543-58658562 None:intergenic 35.0%
AAAAAAGAGTCTGGACACAA+TGG - chr1_1:58658614-58658633 None:intergenic 35.0%
!! TAGCTTTAATTAGCATGGAG+AGG - chr1_1:58658674-58658693 None:intergenic 35.0%
ATCTTAACAGTATCACAGAG+AGG + chr1_1:58658785-58658804 Msa0031840:intron 35.0%
TCGTGTGATGTAAACTCAAA+AGG - chr1_1:58658836-58658855 None:intergenic 35.0%
CACAGAAATTGCAATGATTG+TGG + chr1_1:58658972-58658991 Msa0031840:intron 35.0%
! TCTCACTTCCTTTTCATCAA+TGG + chr1_1:58659064-58659083 Msa0031840:intron 35.0%
! CTCACTTCCTTTTCATCAAT+GGG + chr1_1:58659065-58659084 Msa0031840:intron 35.0%
! TCCTTTTCATCAATGGGAAT+AGG + chr1_1:58659071-58659090 Msa0031840:intron 35.0%
ACCTATTCCCATTGATGAAA+AGG - chr1_1:58659075-58659094 None:intergenic 35.0%
!! AAGAAAGCTTGTGCTTTTTG+GGG + chr1_1:58659102-58659121 Msa0031840:intron 35.0%
! TTGTTATTCCCTTGCCTATT+GGG + chr1_1:58659293-58659312 Msa0031840:intron 35.0%
ATGGATATTACCAAACTCTC+AGG + chr1_1:58659439-58659458 Msa0031840:CDS 35.0%
TGGATATTACCAAACTCTCA+GGG + chr1_1:58659440-58659459 Msa0031840:CDS 35.0%
AACATGTATCTTTCAAGCGA+TGG - chr1_1:58659509-58659528 None:intergenic 35.0%
CATCTGCTAACAAAATCTTG+AGG - chr1_1:58659568-58659587 None:intergenic 35.0%
TAGTAACAGCAGTTTCATCA+GGG + chr1_1:58659642-58659661 Msa0031840:CDS 35.0%
ACTTCAAAACCATCCATTTC+AGG - chr1_1:58659740-58659759 None:intergenic 35.0%
!!! TGAAATGGATGGTTTTGAAG+TGG + chr1_1:58659739-58659758 Msa0031840:CDS 35.0%
CTATGATCAAAGGCCAATTA+GGG - chr1_1:58659790-58659809 None:intergenic 35.0%
GCTATAAGAGCTATGATCAA+AGG - chr1_1:58659800-58659819 None:intergenic 35.0%
TAATGCAGAAGAGCAAGTTA+AGG + chr1_1:58659820-58659839 Msa0031840:CDS 35.0%
AATCCTCCTTAAACAGATAG+CGG + chr1_1:58659886-58659905 Msa0031840:CDS 35.0%
TTTGAATTGTGATTGTGCTG+TGG + chr1_1:58660115-58660134 Msa0031840:three_prime_UTR 35.0%
!!! GTAACATTTTGACTGTGACT+GGG - chr1_1:58660244-58660263 None:intergenic 35.0%
!!! TGTAACATTTTGACTGTGAC+TGG - chr1_1:58660245-58660264 None:intergenic 35.0%
ATAGTACTTTGACAAGGTCG+AGG + chr1_1:58656057-58656076 Msa0031840:five_prime_UTR 40.0%
AACATAGAGAGAGAGAGAGA+GGG - chr1_1:58656184-58656203 None:intergenic 40.0%
TAACATAGAGAGAGAGAGAG+AGG - chr1_1:58656185-58656204 None:intergenic 40.0%
! TGCGATCTGCTTCATTGATT+TGG + chr1_1:58656310-58656329 Msa0031840:five_prime_UTR 40.0%
!! GCGATCTGCTTCATTGATTT+GGG + chr1_1:58656311-58656330 Msa0031840:five_prime_UTR 40.0%
AGCATACACACAATCCTTGT+TGG + chr1_1:58656523-58656542 Msa0031840:CDS 40.0%
!!! CACTGACTTTTTGACCAACA+AGG - chr1_1:58656540-58656559 None:intergenic 40.0%
CCCTCTCCTTCTTAGAATTA+AGG + chr1_1:58656813-58656832 Msa0031840:CDS 40.0%
! CCCTCACCTTAATTCTAAGA+AGG - chr1_1:58656822-58656841 None:intergenic 40.0%
TTTCTTGAGGCAGAATGTGA+TGG + chr1_1:58656846-58656865 Msa0031840:CDS 40.0%
! AGGCAGAATGTGATGGAATT+GGG + chr1_1:58656853-58656872 Msa0031840:CDS 40.0%
GCATGTTAGGATGCTTACTA+GGG + chr1_1:58656918-58656937 Msa0031840:CDS 40.0%
GGATGCTTACTAGGGAAATT+AGG + chr1_1:58656926-58656945 Msa0031840:CDS 40.0%
!! TGTTGAGCTTTCTAAGGCTT+TGG + chr1_1:58656987-58657006 Msa0031840:CDS 40.0%
TTTGGATGCCGAATGATGAT+AGG + chr1_1:58657028-58657047 Msa0031840:CDS 40.0%
TCCTTATCTCCAACACATCA+GGG - chr1_1:58657131-58657150 None:intergenic 40.0%
TTCCTTATCTCCAACACATC+AGG - chr1_1:58657132-58657151 None:intergenic 40.0%
! CTAAAGGGGTTAGGATTTTG+AGG + chr1_1:58657154-58657173 Msa0031840:CDS 40.0%
TTGAGGCCTGAATCTAAACT+AGG + chr1_1:58657171-58657190 Msa0031840:CDS 40.0%
!!! AGTTTTGGTTCTTCCAGGTT+CGG + chr1_1:58657323-58657342 Msa0031840:CDS 40.0%
! TTTGAGACTGTTGCAAAGCT+CGG - chr1_1:58657479-58657498 None:intergenic 40.0%
TCCTTCTACATTCCATGTTG+AGG + chr1_1:58657745-58657764 Msa0031840:CDS 40.0%
CCTTCTACATTCCATGTTGA+GGG + chr1_1:58657746-58657765 Msa0031840:CDS 40.0%
AAGTGCTTGTGTGTGTATCA+AGG + chr1_1:58657786-58657805 Msa0031840:CDS 40.0%
AGTGCTTGTGTGTGTATCAA+GGG + chr1_1:58657787-58657806 Msa0031840:CDS 40.0%
TTGTGTGTGTATCAAGGGTT+TGG + chr1_1:58657792-58657811 Msa0031840:CDS 40.0%
!! TCGTCGCCTAAAACTTTTTC+AGG - chr1_1:58657846-58657865 None:intergenic 40.0%
!!! ACCGAGGGAATCTTGTTTTT+CGG + chr1_1:58657922-58657941 Msa0031840:CDS 40.0%
! TCGGGTTTTTGTTACAAGTG+AGG + chr1_1:58657941-58657960 Msa0031840:CDS 40.0%
! CGGGTTTTTGTTACAAGTGA+GGG + chr1_1:58657942-58657961 Msa0031840:CDS 40.0%
! GTTTTTGTTACAAGTGAGGG+TGG + chr1_1:58657945-58657964 Msa0031840:CDS 40.0%
CTAAACAACAGATTGGTAGG+AGG + chr1_1:58658084-58658103 Msa0031840:CDS 40.0%
TCACAACAGTGAATCTAAGG+AGG + chr1_1:58658112-58658131 Msa0031840:CDS 40.0%
CACAACAGTGAATCTAAGGA+GGG + chr1_1:58658113-58658132 Msa0031840:CDS 40.0%
TGTTGACCTGCATCTTCATT+TGG + chr1_1:58658306-58658325 Msa0031840:intron 40.0%
GTTGACCTGCATCTTCATTT+GGG + chr1_1:58658307-58658326 Msa0031840:intron 40.0%
TTGATCCCAAATGAAGATGC+AGG - chr1_1:58658315-58658334 None:intergenic 40.0%
GCAATAACCGATCTCATATG+AGG + chr1_1:58658470-58658489 Msa0031840:intron 40.0%
TCTCATATGAGGTACATGTG+AGG + chr1_1:58658481-58658500 Msa0031840:intron 40.0%
CTCATATGAGGTACATGTGA+GGG + chr1_1:58658482-58658501 Msa0031840:intron 40.0%
!! GCGCTTAGCTTTAATTAGCA+TGG - chr1_1:58658679-58658698 None:intergenic 40.0%
!! CTATTTTTCCCCATGTTGGA+AGG + chr1_1:58658808-58658827 Msa0031840:intron 40.0%
AAAAGGATCCTTCCAACATG+GGG - chr1_1:58658819-58658838 None:intergenic 40.0%
CAAAAGGATCCTTCCAACAT+GGG - chr1_1:58658820-58658839 None:intergenic 40.0%
TCAAAAGGATCCTTCCAACA+TGG - chr1_1:58658821-58658840 None:intergenic 40.0%
AAAGCAGATTCTGACATGAC+AGG + chr1_1:58658918-58658937 Msa0031840:intron 40.0%
!! CTTGTTATTCCCTTGCCTAT+TGG + chr1_1:58659292-58659311 Msa0031840:intron 40.0%
ATTACCAAACTCTCAGGGTT+TGG + chr1_1:58659445-58659464 Msa0031840:CDS 40.0%
CTAGTAACAGCAGTTTCATC+AGG + chr1_1:58659641-58659660 Msa0031840:CDS 40.0%
AGACATTCACATGCCTGAAA+TGG + chr1_1:58659724-58659743 Msa0031840:CDS 40.0%
ATTCACATGCCTGAAATGGA+TGG + chr1_1:58659728-58659747 Msa0031840:CDS 40.0%
!!! AATGGATGGTTTTGAAGTGG+CGG + chr1_1:58659742-58659761 Msa0031840:CDS 40.0%
GCAAGGATCAGGAAATTCAA+TGG + chr1_1:58659764-58659783 Msa0031840:CDS 40.0%
GGAAATTCAATGGCCCTAAT+TGG + chr1_1:58659774-58659793 Msa0031840:CDS 40.0%
GCTATGATCAAAGGCCAATT+AGG - chr1_1:58659791-58659810 None:intergenic 40.0%
AGTTAAGGATAGATGCATGC+TGG + chr1_1:58659835-58659854 Msa0031840:CDS 40.0%
!! GTTTAAGGAGGATTGGTTTC+CGG - chr1_1:58659880-58659899 None:intergenic 40.0%
GCTATCTGTTTAAGGAGGAT+TGG - chr1_1:58659887-58659906 None:intergenic 40.0%
GTTCATCCGCTATCTGTTTA+AGG - chr1_1:58659895-58659914 None:intergenic 40.0%
!! GATAGCGGATGAACTTAGAT+CGG + chr1_1:58659901-58659920 Msa0031840:CDS 40.0%
CCATAATGCAACCACAATCA+TGG - chr1_1:58660141-58660160 None:intergenic 40.0%
CCATGATTGTGGTTGCATTA+TGG + chr1_1:58660138-58660157 Msa0031840:three_prime_UTR 40.0%
GACTGGGATAATGATGGTTA+TGG - chr1_1:58660228-58660247 None:intergenic 40.0%
AGGTAAATCTGCAACTCCGT+GGG + chr1_1:58656102-58656121 Msa0031840:five_prime_UTR 45.0%
ACATAGAGAGAGAGAGAGAG+GGG - chr1_1:58656183-58656202 None:intergenic 45.0%
CCTCATCATCACAGTTACAG+TGG - chr1_1:58656492-58656511 None:intergenic 45.0%
! CCACTGTAACTGTGATGATG+AGG + chr1_1:58656489-58656508 Msa0031840:CDS 45.0%
CTAAGAAGGAGAGGGATCAA+CGG - chr1_1:58656808-58656827 None:intergenic 45.0%
! AGGTGAGGGAGATTTTCTTG+AGG + chr1_1:58656833-58656852 Msa0031840:CDS 45.0%
! GAGGCAGAATGTGATGGAAT+TGG + chr1_1:58656852-58656871 Msa0031840:CDS 45.0%
! GGCAGAATGTGATGGAATTG+GGG + chr1_1:58656854-58656873 Msa0031840:CDS 45.0%
ATGGAATTGGGGCAAGAAGT+TGG + chr1_1:58656865-58656884 Msa0031840:CDS 45.0%
TGGAATTGGGGCAAGAAGTT+GGG + chr1_1:58656866-58656885 Msa0031840:CDS 45.0%
AGGAAGCTAGTTGGCATGTT+AGG + chr1_1:58656905-58656924 Msa0031840:CDS 45.0%
GGCATGTTAGGATGCTTACT+AGG + chr1_1:58656917-58656936 Msa0031840:CDS 45.0%
AACACATCAGGGTCAATCAC+AGG - chr1_1:58657120-58657139 None:intergenic 45.0%
TGTGATTGACCCTGATGTGT+TGG + chr1_1:58657119-58657138 Msa0031840:CDS 45.0%
ACCCTGATGTGTTGGAGATA+AGG + chr1_1:58657127-58657146 Msa0031840:CDS 45.0%
GCAGCTCCTAGTTTAGATTC+AGG - chr1_1:58657180-58657199 None:intergenic 45.0%
! AACTATCTCCATCTCTGGAG+CGG - chr1_1:58657364-58657383 None:intergenic 45.0%
TCCAGAGATGGAGATAGTTG+AGG + chr1_1:58657365-58657384 Msa0031840:CDS 45.0%
ACCTCAACTATCTCCATCTC+TGG - chr1_1:58657369-58657388 None:intergenic 45.0%
AGAGATGGAGATAGTTGAGG+TGG + chr1_1:58657368-58657387 Msa0031840:CDS 45.0%
GTCTCAAAAGAACGCGATGA+TGG + chr1_1:58657491-58657510 Msa0031840:CDS 45.0%
! TTTGGAATGACTTCCTAGCC+TGG - chr1_1:58657521-58657540 None:intergenic 45.0%
TTCCAAACAGTGATGAGCCA+CGG + chr1_1:58657534-58657553 Msa0031840:CDS 45.0%
AGGCCAATGCATTCAGTTGT+GGG + chr1_1:58657564-58657583 Msa0031840:CDS 45.0%
ATCCCCACAACTGAATGCAT+TGG - chr1_1:58657570-58657589 None:intergenic 45.0%
GGTGACACGATGTTGAAAGT+CGG + chr1_1:58657639-58657658 Msa0031840:CDS 45.0%
CCCTCAACATGGAATGTAGA+AGG - chr1_1:58657749-58657768 None:intergenic 45.0%
CAAGCACTTAGCAATGCAAG+CGG - chr1_1:58657775-58657794 None:intergenic 45.0%
CCCGAAAAACAAGATTCCCT+CGG - chr1_1:58657926-58657945 None:intergenic 45.0%
!!! CCGAGGGAATCTTGTTTTTC+GGG + chr1_1:58657923-58657942 Msa0031840:CDS 45.0%
TACAAGTGAGGGTGGTGATA+AGG + chr1_1:58657953-58657972 Msa0031840:CDS 45.0%
GCTTGAGCTTCAATATGTGC+AGG + chr1_1:58658135-58658154 Msa0031840:CDS 45.0%
TGAGCTTCAATATGTGCAGG+AGG + chr1_1:58658138-58658157 Msa0031840:CDS 45.0%
CTTCAATATGTGCAGGAGGT+TGG + chr1_1:58658142-58658161 Msa0031840:CDS 45.0%
AAGGTCAAGGATCCGATTCA+TGG - chr1_1:58658567-58658586 None:intergenic 45.0%
TCCTTGACCTTCTAGTCTGA+TGG + chr1_1:58658576-58658595 Msa0031840:intron 45.0%
CCTTGACCTTCTAGTCTGAT+GGG + chr1_1:58658577-58658596 Msa0031840:intron 45.0%
AAGAGTCTGGACACAATGGT+TGG - chr1_1:58658610-58658629 None:intergenic 45.0%
!!! GAGGCTATTTTTCCCCATGT+TGG + chr1_1:58658804-58658823 Msa0031840:intron 45.0%
CCAGGATATGCTCCTAAAAG+AGG - chr1_1:58658889-58658908 None:intergenic 45.0%
!! CCTCTTTTAGGAGCATATCC+TGG + chr1_1:58658886-58658905 Msa0031840:intron 45.0%
!!! ATCTGCTTTTTCGACTAGCC+AGG - chr1_1:58658907-58658926 None:intergenic 45.0%
!!! AGCTTGTGCTTTTTGGGGTT+AGG + chr1_1:58659107-58659126 Msa0031840:intron 45.0%
!!! TTGTGCTTTTTGGGGTTAGG+TGG + chr1_1:58659110-58659129 Msa0031840:intron 45.0%
!!! TGTGCTTTTTGGGGTTAGGT+GGG + chr1_1:58659111-58659130 Msa0031840:intron 45.0%
TATTCCCTTGCCTATTGGGT+CGG + chr1_1:58659297-58659316 Msa0031840:intron 45.0%
TGACAAAGAAGCTACTCGAG+AGG + chr1_1:58659609-58659628 Msa0031840:CDS 45.0%
TAAGGATAGATGCATGCTGG+CGG + chr1_1:58659838-58659857 Msa0031840:CDS 45.0%
CATCCGCTATCTGTTTAAGG+AGG - chr1_1:58659892-58659911 None:intergenic 45.0%
! GTTTTTCACCTGCACGAAGT+AGG - chr1_1:58659928-58659947 None:intergenic 45.0%
GACTGTGACTGGGATAATGA+TGG - chr1_1:58660234-58660253 None:intergenic 45.0%
TTTGACAAGGTCGAGGTCCA+AGG + chr1_1:58656064-58656083 Msa0031840:five_prime_UTR 50.0%
GAGGTAAATCTGCAACTCCG+TGG + chr1_1:58656101-58656120 Msa0031840:five_prime_UTR 50.0%
TGCTCTTGTGTCGTGTGCAA+CGG + chr1_1:58656768-58656787 Msa0031840:CDS 50.0%
AAACTAGGAGCTGCGAGTAG+TGG + chr1_1:58657186-58657205 Msa0031840:CDS 50.0%
GAATTTCAAAGGAGGGACGC+CGG + chr1_1:58657272-58657291 Msa0031840:CDS 50.0%
TTCTTCCAGGTTCGGACTCT+AGG + chr1_1:58657331-58657350 Msa0031840:CDS 50.0%
TCTTCCAGGTTCGGACTCTA+GGG + chr1_1:58657332-58657351 Msa0031840:CDS 50.0%
GATGGAGATAGTTGAGGTGG+TGG + chr1_1:58657371-58657390 Msa0031840:CDS 50.0%
GAGAACCGACGCATGAGAAA+GGG - chr1_1:58657415-58657434 None:intergenic 50.0%
GAGGCCAATGCATTCAGTTG+TGG + chr1_1:58657563-58657582 Msa0031840:CDS 50.0%
GGCCAATGCATTCAGTTGTG+GGG + chr1_1:58657565-58657584 Msa0031840:CDS 50.0%
!! TATGTGCAGGAGGTTGGTAC+AGG + chr1_1:58658148-58658167 Msa0031840:CDS 50.0%
CCCATCAGACTAGAAGGTCA+AGG - chr1_1:58658580-58658599 None:intergenic 50.0%
GTGGTTCCCATCAGACTAGA+AGG - chr1_1:58658586-58658605 None:intergenic 50.0%
TCTGGACACAATGGTTGGAG+TGG - chr1_1:58658605-58658624 None:intergenic 50.0%
ATTCCCTTGCCTATTGGGTC+GGG + chr1_1:58659298-58659317 Msa0031840:intron 50.0%
TGCACCAAACCCTGAGAGTT+TGG - chr1_1:58659452-58659471 None:intergenic 50.0%
!! AACTCTCAGGGTTTGGTGCA+AGG + chr1_1:58659452-58659471 Msa0031840:CDS 50.0%
AAAGAAGCTACTCGAGAGGC+TGG + chr1_1:58659613-58659632 Msa0031840:CDS 50.0%
AAGAAGCTACTCGAGAGGCT+GGG + chr1_1:58659614-58659633 Msa0031840:CDS 50.0%
TTCATCAGGGTTTGAGTGCC+TGG + chr1_1:58659655-58659674 Msa0031840:CDS 50.0%
TCATCAGGGTTTGAGTGCCT+GGG + chr1_1:58659656-58659675 Msa0031840:CDS 50.0%
!!! ATGGTTTTGAAGTGGCGGCA+AGG + chr1_1:58659747-58659766 Msa0031840:CDS 50.0%
AAGGATAGATGCATGCTGGC+GGG + chr1_1:58659839-58659858 Msa0031840:CDS 50.0%
CGGGAATGAATGGTGTGATC+CGG + chr1_1:58659858-58659877 Msa0031840:CDS 50.0%
TTGTGCTGTGGCCATGATTG+TGG + chr1_1:58660127-58660146 Msa0031840:three_prime_UTR 50.0%
ACAAGGTCGAGGTCCAAGGA+GGG + chr1_1:58656068-58656087 Msa0031840:five_prime_UTR 55.0%
CGAAAGGAAAGTGGGTCCCA+CGG - chr1_1:58656121-58656140 None:intergenic 55.0%
CACACGACACAAGAGCAGTG+AGG - chr1_1:58656765-58656784 None:intergenic 55.0%
AGAAGGAGAGGGATCAACGG+CGG - chr1_1:58656805-58656824 None:intergenic 55.0%
CAAACCCTAGAGTCCGAACC+TGG - chr1_1:58657339-58657358 None:intergenic 55.0%
!! CAGGTTCGGACTCTAGGGTT+TGG + chr1_1:58657337-58657356 Msa0031840:CDS 55.0%
! AGTTGAGGTGGTGGCTGATC+AGG + chr1_1:58657380-58657399 Msa0031840:CDS 55.0%
CGACGCATGAGAAAGGGCTA+CGG - chr1_1:58657409-58657428 None:intergenic 55.0%
CGTAGCCCTTTCTCATGCGT+CGG + chr1_1:58657407-58657426 Msa0031840:CDS 55.0%
CGAGAACCGACGCATGAGAA+AGG - chr1_1:58657416-58657435 None:intergenic 55.0%
GTCCGTGGCTCATCACTGTT+TGG - chr1_1:58657539-58657558 None:intergenic 55.0%
TTGTTGAACACGCGTGACCG+AGG + chr1_1:58657906-58657925 Msa0031840:CDS 55.0%
TGTTGAACACGCGTGACCGA+GGG + chr1_1:58657907-58657926 Msa0031840:CDS 55.0%
!! TGCAGGAGGTTGGTACAGGT+AGG + chr1_1:58658152-58658171 Msa0031840:intron 55.0%
TTCCCTTGCCTATTGGGTCG+GGG + chr1_1:58659299-58659318 Msa0031840:intron 55.0%
! GAGTGCCTGGGTGCTATAAG+TGG + chr1_1:58659668-58659687 Msa0031840:CDS 55.0%
CAGAGCCACTTATAGCACCC+AGG - chr1_1:58659676-58659695 None:intergenic 55.0%
! CTGGGTGCTATAAGTGGCTC+TGG + chr1_1:58659674-58659693 Msa0031840:CDS 55.0%
!! GGTGCTATAAGTGGCTCTGG+TGG + chr1_1:58659677-58659696 Msa0031840:CDS 55.0%
TTGAAGTGGCGGCAAGGATC+AGG + chr1_1:58659753-58659772 Msa0031840:CDS 55.0%
TGCATGCTGGCGGGAATGAA+TGG + chr1_1:58659848-58659867 Msa0031840:CDS 55.0%
AGATCGGTCCTACTTCGTGC+AGG + chr1_1:58659917-58659936 Msa0031840:CDS 55.0%
GACAAGGTCGAGGTCCAAGG+AGG + chr1_1:58656067-58656086 Msa0031840:five_prime_UTR 60.0%
CTCGTACTGTGCACCCTCCT+TGG - chr1_1:58656084-58656103 None:intergenic 60.0%
! CAAGGAGGGTGCACAGTACG+AGG + chr1_1:58656082-58656101 Msa0031840:five_prime_UTR 60.0%
CTAGGAGCTGCGAGTAGTGG+CGG + chr1_1:58657189-58657208 Msa0031840:CDS 60.0%
!! GGTGGGGGTACTGAGGAGTT+GGG + chr1_1:58657210-58657229 Msa0031840:CDS 60.0%
! TGAGGAGTTGGGTGCTGTCG+CGG + chr1_1:58657221-58657240 Msa0031840:CDS 60.0%
GGTTTGGACCGCTCCAGAGA+TGG + chr1_1:58657353-58657372 Msa0031840:CDS 60.0%
! TGAGGTGGTGGCTGATCAGG+TGG + chr1_1:58657383-58657402 Msa0031840:CDS 60.0%
! GAACGCGATGATGGCTAGCC+AGG + chr1_1:58657500-58657519 Msa0031840:CDS 60.0%
! CGATGATGGCTAGCCAGGCT+AGG + chr1_1:58657505-58657524 Msa0031840:CDS 60.0%
! CAGTGATGAGCCACGGACTG+AGG + chr1_1:58657541-58657560 Msa0031840:CDS 60.0%
! TGATGAGCCACGGACTGAGG+AGG + chr1_1:58657544-58657563 Msa0031840:CDS 60.0%
GCAAGCGGCTTCCCTCAACA+TGG - chr1_1:58657760-58657779 None:intergenic 60.0%
TCCCTTGCCTATTGGGTCGG+GGG + chr1_1:58659300-58659319 Msa0031840:intron 60.0%
ACCCCCGACCCAATAGGCAA+GGG - chr1_1:58659304-58659323 None:intergenic 60.0%
GGGGGTGGCCTGTACGAAAT+GGG + chr1_1:58659318-58659337 Msa0031840:intron 60.0%
GCCTGTACGAAATGGGCCCT+GGG + chr1_1:58659325-58659344 Msa0031840:intron 60.0%
ACCCAGGGCCCATTTCGTAC+AGG - chr1_1:58659329-58659348 None:intergenic 60.0%
GAGCTGCGAGTAGTGGCGGT+GGG + chr1_1:58657193-58657212 Msa0031840:CDS 65.0%
AGCTGCGAGTAGTGGCGGTG+GGG + chr1_1:58657194-58657213 Msa0031840:CDS 65.0%
!! TAGTGGCGGTGGGGGTACTG+AGG + chr1_1:58657203-58657222 Msa0031840:CDS 65.0%
!! CGGTGGGGGTACTGAGGAGT+TGG + chr1_1:58657209-58657228 Msa0031840:CDS 65.0%
CAAAGGAGGGACGCCGGAGT+TGG + chr1_1:58657278-58657297 Msa0031840:CDS 65.0%
! GCATTGGCCTCCTCAGTCCG+TGG - chr1_1:58657554-58657573 None:intergenic 65.0%
CACCCCCGACCCAATAGGCA+AGG - chr1_1:58659305-58659324 None:intergenic 65.0%
CTTGCCTATTGGGTCGGGGG+TGG + chr1_1:58659303-58659322 Msa0031840:intron 65.0%
CGGGGGTGGCCTGTACGAAA+TGG + chr1_1:58659317-58659336 Msa0031840:intron 65.0%
GGCCTGTACGAAATGGGCCC+TGG + chr1_1:58659324-58659343 Msa0031840:intron 65.0%
GGAGCTGCGAGTAGTGGCGG+TGG + chr1_1:58657192-58657211 Msa0031840:CDS 70.0%
GCTGCGAGTAGTGGCGGTGG+GGG + chr1_1:58657195-58657214 Msa0031840:CDS 70.0%
CAGGCCACCCCCGACCCAAT+AGG - chr1_1:58659310-58659329 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 58656019 58660331 58656019 ID=Msa0031840;Name=Msa0031840
chr1_1 mRNA 58656019 58660331 58656019 ID=Msa0031840-mRNA-1;Parent=Msa0031840;Name=Msa0031840-mRNA-1;_AED=0.02;_eAED=0.02;_QI=393|1|1|1|1|1|2|379|762
chr1_1 exon 58656019 58658169 58656019 ID=Msa0031840-mRNA-1:exon:17923;Parent=Msa0031840-mRNA-1
chr1_1 exon 58659422 58660331 58659422 ID=Msa0031840-mRNA-1:exon:17924;Parent=Msa0031840-mRNA-1
chr1_1 five_prime_UTR 58656019 58656411 58656019 ID=Msa0031840-mRNA-1:five_prime_utr;Parent=Msa0031840-mRNA-1
chr1_1 CDS 58656412 58658169 58656412 ID=Msa0031840-mRNA-1:cds;Parent=Msa0031840-mRNA-1
chr1_1 CDS 58659422 58659952 58659422 ID=Msa0031840-mRNA-1:cds;Parent=Msa0031840-mRNA-1
chr1_1 three_prime_UTR 58659953 58660331 58659953 ID=Msa0031840-mRNA-1:three_prime_utr;Parent=Msa0031840-mRNA-1
Gene Sequence

>Msa0031840

ATGAAAACTCTTATTCTGTTGTTACTGCTTTTTAACCTTACTCTTTATGCTTCTGCTACTGATTCTGATGAATATGACCACTGTAACTGTGATGATGAGGAAGCACTTTTCAGCATACACACAATCCTTGTTGGTCAAAAAGTCAGTGATTTTTTCATTGCAATTGCATATTTTTCAATACCAATTGAGCTTCTTTACTTTGTTAGTCGTTCAAATGTTCCTTTCAAATTGCTGTTTCTTCAATTCATAGCCTTCATAGTTCTATGTGGTATGACTCATTTACTCAATGCTTATTCTTATCATAGTCATCCTTCTTTTCAACTATTGCTTTCCCTTACTGTTGCTAAATTCCTCACTGCTCTTGTGTCGTGTGCAACGGCATTGACACTTCCGCCGTTGATCCCTCTCCTTCTTAGAATTAAGGTGAGGGAGATTTTCTTGAGGCAGAATGTGATGGAATTGGGGCAAGAAGTTGGGATTATGAAGAAACAAAAGGAAGCTAGTTGGCATGTTAGGATGCTTACTAGGGAAATTAGGAAGTCTCTTGATAAACATACAATTTTGTATACTACTCTTGTTGAGCTTTCTAAGGCTTTGGATTTGCATAATTGTGCTGTTTGGATGCCGAATGATGATAGGAGAGAGATGTATTTGACTCATGAATTGAAATCGGATTCGGGTAAGAGTTTTCATCATAATTCTATTCCTGTGATTGACCCTGATGTGTTGGAGATAAGGAAAACTAAAGGGGTTAGGATTTTGAGGCCTGAATCTAAACTAGGAGCTGCGAGTAGTGGCGGTGGGGGTACTGAGGAGTTGGGTGCTGTCGCGGCTATTCGTATGCCGATGCTTCATGTTTCGAATTTCAAAGGAGGGACGCCGGAGTTGGTTGATACATGTTATGCTATACTAGTTTTGGTTCTTCCAGGTTCGGACTCTAGGGTTTGGACCGCTCCAGAGATGGAGATAGTTGAGGTGGTGGCTGATCAGGTGGCCGTAGCCCTTTCTCATGCGTCGGTTCTCGAAGAGTCTCATTTAATGAGAGAGAAACTCGAAGAGCAAAACCGAGCTTTGCAACAGTCTCAAAAGAACGCGATGATGGCTAGCCAGGCTAGGAAGTCATTCCAAACAGTGATGAGCCACGGACTGAGGAGGCCAATGCATTCAGTTGTGGGGATGCTTTCATTGTTTCAAGAGGGTAATATGAGGCCTGAACAAAAGATTATTGGTGACACGATGTTGAAAGTCGGCAACGTGCTCTCGAGTTTAGTAAACGATGTAATGGATATTTCTGAAAATAAAAAGGGTGGCCTTCAGTTAGAGATGAAACCTTTCCTTCTACATTCCATGTTGAGGGAAGCCGCTTGCATTGCTAAGTGCTTGTGTGTGTATCAAGGGTTTGGTTTTCAAATTGATGTCGAAAAGTCTTTGCCTGAAAAAGTTTTAGGCGACGAAGCAAGAACTTTTCAAGTAATTATGCATATTGTTGGCTATTTGTTGAACACGCGTGACCGAGGGAATCTTGTTTTTCGGGTTTTTGTTACAAGTGAGGGTGGTGATAAGGATGACAAAAAATTTGGTGTTTGGAGATCGAGCAGCCCAGTTGAGTATGTAGACATAAAATTTGATTTTCAGATTACTGGTAATTCTCAGTCAGATGAACCGGTTTCAACTAAACAACAGATTGGTAGGAGGCTGAATCACAACAGTGAATCTAAGGAGGGCTTGAGCTTCAATATGTGCAGGAGGTTGGTACAGATAATGCAAGGTAATATATGGATATTACCAAACTCTCAGGGTTTGGTGCAAGGCGTGTCACTTCTTCTAAAGTTTCAGATAGGACCATCGCTTGAAAGATACATGTTTGCACCTAAAGATTATTCAAATTCACAGTTTGGAGGCCTCAAGATTTTGTTAGCAGATGATGATGGTTTAAATAGGATCGTGACAAAGAAGCTACTCGAGAGGCTGGGCTGTCTAGTAACAGCAGTTTCATCAGGGTTTGAGTGCCTGGGTGCTATAAGTGGCTCTGGTGGTAACTCATTCAAAATTATCATGTTAGACATTCACATGCCTGAAATGGATGGTTTTGAAGTGGCGGCAAGGATCAGGAAATTCAATGGCCCTAATTGGCCTTTGATCATAGCTCTTATAGCTAATGCAGAAGAGCAAGTTAAGGATAGATGCATGCTGGCGGGAATGAATGGTGTGATCCGGAAACCAATCCTCCTTAAACAGATAGCGGATGAACTTAGATCGGTCCTACTTCGTGCAGGTGAAAAACTGTGA
Protein sequence

>Msa0031840

MKTLILLLLLFNLTLYASATDSDEYDHCNCDDEEALFSIHTILVGQKVSDFFIAIAYFSIPIELLYFVSRSNVPFKLLFLQFIAFIVLCGMTHLLNAYSYHSHPSFQLLLSLTVAKFLTALVSCATALTLPPLIPLLLRIKVREIFLRQNVMELGQEVGIMKKQKEASWHVRMLTREIRKSLDKHTILYTTLVELSKALDLHNCAVWMPNDDRREMYLTHELKSDSGKSFHHNSIPVIDPDVLEIRKTKGVRILRPESKLGAASSGGGGTEELGAVAAIRMPMLHVSNFKGGTPELVDTCYAILVLVLPGSDSRVWTAPEMEIVEVVADQVAVALSHASVLEESHLMREKLEEQNRALQQSQKNAMMASQARKSFQTVMSHGLRRPMHSVVGMLSLFQEGNMRPEQKIIGDTMLKVGNVLSSLVNDVMDISENKKGGLQLEMKPFLLHSMLREAACIAKCLCVYQGFGFQIDVEKSLPEKVLGDEARTFQVIMHIVGYLLNTRDRGNLVFRVFVTSEGGDKDDKKFGVWRSSSPVEYVDIKFDFQITGNSQSDEPVSTKQQIGRRLNHNSESKEGLSFNMCRRLVQIMQGNIWILPNSQGLVQGVSLLLKFQIGPSLERYMFAPKDYSNSQFGGLKILLADDDGLNRIVTKKLLERLGCLVTAVSSGFECLGAISGSGGNSFKIIMLDIHMPEMDGFEVAARIRKFNGPNWPLIIALIANAEEQVKDRCMLAGMNGVIRKPILLKQIADELRSVLLRAGEKL*