AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0032310

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0032310 MtrunA17_Chr1g0190311 64.792 480 19 4 1 330 7 486 0.0 561
Msa0032310 MtrunA17_Chr1g0190311 68.116 345 43 3 530 807 229 573 1.83e-144 441
Msa0032310 MtrunA17_Chr1g0190311 92.778 180 13 0 359 538 229 408 2.38e-104 336
Msa0032310 MtrunA17_Chr1g0190311 86.486 37 5 0 333 369 374 410 5.89e-12 69.3
Msa0032310 MtrunA17_Chr8g0392541 81.673 251 15 2 112 331 29 279 7.23e-134 400
Msa0032310 MtrunA17_Chr8g0392541 71.277 282 34 3 534 768 24 305 3.51e-123 373
Msa0032310 MtrunA17_Chr8g0392541 92.090 177 13 1 363 538 24 200 3.33e-103 321
Msa0032310 MtrunA17_Chr8g0392541 83.784 37 6 0 333 369 166 202 7.79e-12 67.4
Msa0032310 MtrunA17_Chr7g0262001 37.805 246 85 5 628 807 388 631 3.72e-41 161
Msa0032310 MtrunA17_Chr7g0262001 45.570 158 58 1 201 330 388 545 3.42e-37 149
Msa0032310 MtrunA17_Chr7g0262001 51.220 82 40 0 457 538 388 469 2.05e-20 96.7
Msa0032310 MtrunA17_Chr1g0183321 29.792 480 215 15 386 784 213 651 2.38e-40 159
Msa0032310 MtrunA17_Chr1g0183321 47.399 173 59 4 189 330 418 589 7.69e-38 151
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0032310 AT3G04380.3 43.038 237 68 4 618 788 119 354 9.49e-53 191
Msa0032310 AT3G04380.3 47.368 171 59 2 191 330 119 289 1.74e-45 171
Msa0032310 AT3G04380.3 54.839 93 41 1 447 538 119 211 3.43e-27 116
Msa0032310 AT3G04380.5 43.038 237 68 4 618 788 92 327 1.32e-52 190
Msa0032310 AT3G04380.5 47.368 171 59 2 191 330 92 262 1.71e-45 170
Msa0032310 AT3G04380.5 54.839 93 41 1 447 538 92 184 3.36e-27 116
Msa0032310 AT3G04380.1 43.038 237 68 4 618 788 135 370 1.37e-52 191
Msa0032310 AT3G04380.1 47.368 171 59 2 191 330 135 305 1.95e-45 171
Msa0032310 AT3G04380.1 54.839 93 41 1 447 538 135 227 4.13e-27 116
Msa0032310 AT3G04380.2 43.038 237 68 4 618 788 108 343 1.53e-52 190
Msa0032310 AT3G04380.2 47.368 171 59 2 191 330 108 278 1.77e-45 170
Msa0032310 AT3G04380.2 54.839 93 41 1 447 538 108 200 3.81e-27 116
Msa0032310 AT3G04380.6 43.038 237 68 4 618 788 108 343 1.71e-52 190
Msa0032310 AT3G04380.6 47.368 171 59 2 191 330 108 278 1.82e-45 170
Msa0032310 AT3G04380.6 54.839 93 41 1 447 538 108 200 3.78e-27 116
Msa0032310 AT3G04380.4 43.038 237 68 4 618 788 135 370 1.78e-52 191
Msa0032310 AT3G04380.4 47.368 171 59 2 191 330 135 305 2.26e-45 171
Msa0032310 AT3G04380.4 54.839 93 41 1 447 538 135 227 4.34e-27 116
Msa0032310 AT5G43990.7 39.884 173 73 2 188 330 293 464 2.81e-29 124
Msa0032310 AT5G43990.7 33.898 236 85 4 615 785 293 522 1.87e-27 119
Msa0032310 AT5G43990.7 41.053 95 55 1 444 538 293 386 7.17e-13 72.8
Msa0032310 AT5G43990.8 39.884 173 73 2 188 330 313 484 3.00e-29 124
Msa0032310 AT5G43990.8 33.898 236 85 4 615 785 313 542 2.15e-27 119
Msa0032310 AT5G43990.8 41.053 95 55 1 444 538 313 406 7.43e-13 72.8
Msa0032310 AT5G43990.12 39.884 173 73 2 188 330 313 484 3.00e-29 124
Msa0032310 AT5G43990.12 33.898 236 85 4 615 785 313 542 2.15e-27 119
Msa0032310 AT5G43990.12 41.053 95 55 1 444 538 313 406 7.43e-13 72.8
Msa0032310 AT5G43990.6 39.884 173 73 2 188 330 313 484 3.00e-29 124
Msa0032310 AT5G43990.6 33.898 236 85 4 615 785 313 542 2.15e-27 119
Msa0032310 AT5G43990.6 41.053 95 55 1 444 538 313 406 7.43e-13 72.8
Msa0032310 AT5G43990.13 39.884 173 73 2 188 330 313 484 3.00e-29 124
Msa0032310 AT5G43990.13 33.898 236 85 4 615 785 313 542 2.15e-27 119
Msa0032310 AT5G43990.13 41.053 95 55 1 444 538 313 406 7.43e-13 72.8
Msa0032310 AT5G43990.3 39.884 173 73 2 188 330 382 553 3.42e-29 125
Msa0032310 AT5G43990.3 33.898 236 85 4 615 785 382 611 2.58e-27 119
Msa0032310 AT5G43990.3 41.053 95 55 1 444 538 382 475 8.46e-13 72.8
Msa0032310 AT5G43990.11 39.884 173 73 2 188 330 382 553 3.42e-29 125
Msa0032310 AT5G43990.11 33.898 236 85 4 615 785 382 611 2.58e-27 119
Msa0032310 AT5G43990.11 41.053 95 55 1 444 538 382 475 8.46e-13 72.8
Msa0032310 AT5G43990.1 39.884 173 73 2 188 330 382 553 3.42e-29 125
Msa0032310 AT5G43990.1 33.898 236 85 4 615 785 382 611 2.58e-27 119
Msa0032310 AT5G43990.1 41.053 95 55 1 444 538 382 475 8.46e-13 72.8
Msa0032310 AT5G43990.4 39.884 173 73 2 188 330 382 553 3.42e-29 125
Msa0032310 AT5G43990.4 33.898 236 85 4 615 785 382 611 2.58e-27 119
Msa0032310 AT5G43990.4 41.053 95 55 1 444 538 382 475 8.46e-13 72.8
Msa0032310 AT5G43990.16 39.884 173 73 2 188 330 362 533 3.71e-29 124
Msa0032310 AT5G43990.16 33.898 236 85 4 615 785 362 591 2.71e-27 119
Msa0032310 AT5G43990.16 41.053 95 55 1 444 538 362 455 8.73e-13 72.8
Msa0032310 AT5G43990.5 39.884 173 73 2 188 330 362 533 3.71e-29 124
Msa0032310 AT5G43990.5 33.898 236 85 4 615 785 362 591 2.71e-27 119
Msa0032310 AT5G43990.5 41.053 95 55 1 444 538 362 455 8.73e-13 72.8
Msa0032310 AT5G43990.17 39.884 173 73 2 188 330 362 533 3.71e-29 124
Msa0032310 AT5G43990.17 33.898 236 85 4 615 785 362 591 2.71e-27 119
Msa0032310 AT5G43990.17 41.053 95 55 1 444 538 362 455 8.73e-13 72.8
Msa0032310 AT5G43990.14 39.884 173 73 2 188 330 362 533 3.71e-29 124
Msa0032310 AT5G43990.14 33.898 236 85 4 615 785 362 591 2.71e-27 119
Msa0032310 AT5G43990.14 41.053 95 55 1 444 538 362 455 8.73e-13 72.8
Msa0032310 AT5G43990.15 39.884 173 73 2 188 330 385 556 3.74e-29 124
Msa0032310 AT5G43990.15 33.898 236 85 4 615 785 385 614 3.00e-27 119
Msa0032310 AT5G43990.15 41.053 95 55 1 444 538 385 478 9.33e-13 72.4
Msa0032310 AT5G43990.10 39.884 173 73 2 188 330 385 556 3.74e-29 124
Msa0032310 AT5G43990.10 33.898 236 85 4 615 785 385 614 3.00e-27 119
Msa0032310 AT5G43990.10 41.053 95 55 1 444 538 385 478 9.33e-13 72.4
Msa0032310 AT5G43990.9 39.884 173 73 2 188 330 405 576 3.89e-29 125
Msa0032310 AT5G43990.9 33.898 236 85 4 615 785 405 634 3.07e-27 119
Msa0032310 AT5G43990.9 41.053 95 55 1 444 538 405 498 9.42e-13 72.4
Msa0032310 AT5G43990.2 39.884 173 73 2 188 330 405 576 3.89e-29 125
Msa0032310 AT5G43990.2 33.898 236 85 4 615 785 405 634 3.07e-27 119
Msa0032310 AT5G43990.2 41.053 95 55 1 444 538 405 498 9.42e-13 72.4
Msa0032310 AT1G04050.3 37.356 174 78 2 188 330 292 465 3.56e-25 112
Msa0032310 AT1G04050.3 56.061 66 25 1 723 788 466 527 1.01e-13 75.5
Msa0032310 AT1G04050.3 38.835 103 62 1 615 716 292 394 1.23e-12 72.0
Msa0032310 AT1G04050.2 37.356 174 78 2 188 330 396 569 4.25e-25 112
Msa0032310 AT1G04050.2 56.061 66 25 1 723 788 570 631 9.88e-14 75.9
Msa0032310 AT1G04050.2 38.835 103 62 1 615 716 396 498 1.15e-12 72.4
Msa0032310 AT1G04050.1 37.356 174 78 2 188 330 396 569 4.25e-25 112
Msa0032310 AT1G04050.1 56.061 66 25 1 723 788 570 631 9.88e-14 75.9
Msa0032310 AT1G04050.1 38.835 103 62 1 615 716 396 498 1.15e-12 72.4

Find 192 sgRNAs with CRISPR-Local

Find 596 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATGGAATGTAATTAAATTT+TGG 0.115496 1_1:-59329004 None:intergenic
CATGGAATGTAATTAAATTT+TGG 0.115496 1_1:-59331587 None:intergenic
CATGGAATGTAATTAAATTT+TGG 0.115496 1_1:-59334689 None:intergenic
ATTAATGATAATTAATAAAT+TGG 0.118899 1_1:+59335857 Msa0032310:CDS
AATATCAATATTACCCTTAC+TGG 0.257652 1_1:-59328777 None:intergenic
AATATCAATATTACCCTTAC+TGG 0.257652 1_1:-59331360 None:intergenic
AATATCAATATTACCCTTAC+TGG 0.257652 1_1:-59334462 None:intergenic
TAAATTGTGATGCTGCATTA+AGG 0.275228 1_1:+59328837 Msa0032310:CDS
TAAATTGTGATGCTGCATTA+AGG 0.275228 1_1:+59331420 Msa0032310:CDS
TAAATTGTGATGCTGCATTA+AGG 0.275228 1_1:+59334522 Msa0032310:CDS
TTTAACAGATTGCATGTCTA+TGG 0.280895 1_1:+59334886 Msa0032310:CDS
AGATTTCCATTGGAAGCTTT+TGG 0.301470 1_1:-59334359 None:intergenic
TCTCCATCATGACAACTTAC+TGG 0.309078 1_1:-59327875 None:intergenic
TTAATGATAATTAATAAATT+GGG 0.309452 1_1:+59335858 Msa0032310:CDS
AATAGTTTACCTGCAATTTA+CGG 0.316922 1_1:-59329405 None:intergenic
AGTAAGGGTAATATTGATAT+TGG 0.324445 1_1:+59328779 Msa0032310:CDS
AGTAAGGGTAATATTGATAT+TGG 0.324445 1_1:+59331362 Msa0032310:CDS
AGTAAGGGTAATATTGATAT+TGG 0.324445 1_1:+59334464 Msa0032310:CDS
TCCCTTGCATGGTTCAAGTT+TGG 0.344526 1_1:-59329293 None:intergenic
ATTAATAAAGGCTGGAAGAT+TGG 0.356511 1_1:+59335936 Msa0032310:CDS
GGCTTGAATTTAAATCGAAA+TGG 0.357205 1_1:+59331446 Msa0032310:CDS
GGCTTGAATTTAAATCGAAA+TGG 0.357205 1_1:+59334548 Msa0032310:CDS
GATTGCAGCTCCGATTGTTC+TGG 0.358288 1_1:+59330312 Msa0032310:CDS
TATTTCACTTGCTCGGATTA+CGG 0.361042 1_1:+59329057 Msa0032310:CDS
AGGTTTAAGCCGTAAATTGC+AGG 0.364369 1_1:+59329396 Msa0032310:CDS
CAGTCTGCATCAAGTGTTAC+AGG 0.368711 1_1:-59335819 None:intergenic
CTTTGATACATTGTGTTACA+TGG 0.369163 1_1:-59329022 None:intergenic
CTTTGATACATTGTGTTACA+TGG 0.369163 1_1:-59331605 None:intergenic
CTTTGATACATTGTGTTACA+TGG 0.369163 1_1:-59334707 None:intergenic
TATTGGTTCTTCTTCACCCT+TGG 0.376191 1_1:+59328796 Msa0032310:CDS
TATTGGTTCTTCTTCACCCT+TGG 0.376191 1_1:+59331379 Msa0032310:CDS
TATTGGTTCTTCTTCACCCT+TGG 0.376191 1_1:+59334481 Msa0032310:CDS
GATTGCTGCTCCGATTGTTC+AGG 0.382082 1_1:+59331668 Msa0032310:CDS
GATTGCTGCTCCGATTGTTC+AGG 0.382082 1_1:+59334770 Msa0032310:CDS
CCTGTCATATAATTCTGAAT+TGG 0.382980 1_1:-59335760 None:intergenic
AGTTTCCTGTTTAAAAGTCT+TGG 0.385683 1_1:-59327999 None:intergenic
AATATTACCCTTACTGGTTC+TGG 0.387725 1_1:-59328771 None:intergenic
AATATTACCCTTACTGGTTC+TGG 0.387725 1_1:-59331354 None:intergenic
AATATTACCCTTACTGGTTC+TGG 0.387725 1_1:-59334456 None:intergenic
ATTGGTTCTTCTTCACCCTT+GGG 0.396671 1_1:+59328797 Msa0032310:CDS
ATTGGTTCTTCTTCACCCTT+GGG 0.396671 1_1:+59331380 Msa0032310:CDS
ATTGGTTCTTCTTCACCCTT+GGG 0.396671 1_1:+59334482 Msa0032310:CDS
TGTGCGTGCTCTCAAGAAAC+TGG 0.399724 1_1:+59330360 Msa0032310:CDS
GATTGCTGCTCTGATTGTTC+AGG 0.400884 1_1:+59329085 Msa0032310:CDS
GTATCAATGATAATTAATAA+AGG 0.401181 1_1:+59335924 Msa0032310:CDS
TGAAACCCTCTCAAATTTCC+AGG 0.401603 1_1:+59328023 Msa0032310:CDS
GACTCAAGAAGGAAAGGGCT+GGG 0.401844 1_1:+59335671 Msa0032310:CDS
ACCAAGTGAAGTTTCTGTTT+AGG 0.402308 1_1:-59327902 None:intergenic
ACTTGCTCGGATTGCGGATG+AGG 0.407887 1_1:+59331646 Msa0032310:CDS
ACTTGCTCGGATTGCGGATG+AGG 0.407887 1_1:+59334748 Msa0032310:CDS
TCTGCATGCTCTCAAGAAAC+TGG 0.410625 1_1:+59331716 Msa0032310:CDS
ATGGCAATTCAATCAAGGTT+TGG 0.413866 1_1:+59335961 Msa0032310:CDS
GTTTCCTGTTTAAAAGTCTT+GGG 0.416453 1_1:-59327998 None:intergenic
CTACAGCCTTCATAGCTTCA+AGG 0.424157 1_1:-59327451 None:intergenic
TGTGAGCTTCATGTCTTGCC+TGG 0.425441 1_1:-59328041 None:intergenic
AACCAATTCGCAGGCATTCA+TGG 0.426552 1_1:+59328063 Msa0032310:CDS
TGTGCATGCCCTCAAGAAAC+TGG 0.431132 1_1:+59334818 Msa0032310:CDS
AGAGATAGAAAGATTTATCC+TGG 0.433743 1_1:+59328091 Msa0032310:CDS
GCTTGAATTTAAATCGAAAT+GGG 0.438122 1_1:+59331447 Msa0032310:CDS
GCTTGAATTTAAATCGAAAT+GGG 0.438122 1_1:+59334549 Msa0032310:CDS
CTGTAACACTTGATGCAGAC+TGG 0.438878 1_1:+59335820 Msa0032310:CDS
TGTGCATGCTCTCAAGAAAC+TGG 0.447117 1_1:+59329133 Msa0032310:CDS
TGGAAATGGCAATTCAATCA+AGG 0.453383 1_1:+59335956 Msa0032310:CDS
TGAACCATGCAAGGGACATC+TGG 0.458656 1_1:+59329300 Msa0032310:CDS
AAGACAGTCGCCTGAACAAT+CGG 0.467464 1_1:-59331678 None:intergenic
AAGACAGTCGCCTGAACAAT+CGG 0.467464 1_1:-59334780 None:intergenic
AAAGGCTGGAAGATTGGAAA+TGG 0.469184 1_1:+59335942 Msa0032310:CDS
ATGTTAATATTTCACTTGCT+CGG 0.469780 1_1:+59329050 Msa0032310:CDS
ATGTTAATATTTCACTTGCT+CGG 0.469780 1_1:+59331633 Msa0032310:CDS
ATGTTAATATTTCACTTGCT+CGG 0.469780 1_1:+59334735 Msa0032310:CDS
ACTTGCTCGGATTACGGATG+AGG 0.471300 1_1:+59329063 Msa0032310:CDS
TAATAACACCAGAACCAGTA+AGG 0.476282 1_1:+59328763 Msa0032310:CDS
TAATAACACCAGAACCAGTA+AGG 0.476282 1_1:+59331346 Msa0032310:CDS
TAATAACACCAGAACCAGTA+AGG 0.476282 1_1:+59334448 Msa0032310:CDS
CAGACAGTCGCCAGAACAAT+CGG 0.476685 1_1:-59330322 None:intergenic
TAATAAATTGGGGCTAAGCC+AGG 0.481071 1_1:+59335869 Msa0032310:CDS
ATATGTATGTCTATCATTGC+CGG 0.482653 1_1:-59335796 None:intergenic
AGCCATGAATGCCTGCGAAT+TGG 0.483305 1_1:-59328065 None:intergenic
CCTTCAGATGATGCTGCCCC+AGG 0.486945 1_1:-59328109 None:intergenic
TAAAGCCCTTGAAGCTATGA+AGG 0.487111 1_1:+59327445 Msa0032310:CDS
TTTGACAGTAAGATTTCCAT+TGG 0.487180 1_1:-59328684 None:intergenic
TTTGACAGTAAGATTTCCAT+TGG 0.487180 1_1:-59331267 None:intergenic
TTTGACAGTAAGATTTCCAT+TGG 0.487180 1_1:-59334369 None:intergenic
CAATGATAATTAATAAAGGC+TGG 0.488578 1_1:+59335928 Msa0032310:CDS
ACTCTCCACCAGTTTCTTGA+GGG 0.500177 1_1:-59334826 None:intergenic
AGTTGCCAGCTGACAAAACC+TGG 0.500562 1_1:-59327937 None:intergenic
ATGCTTCTCCATGTGAAGCC+TGG 0.502146 1_1:-59335887 None:intergenic
TCGGAGCTGCAATCCTCATC+CGG 0.504079 1_1:-59330303 None:intergenic
CATGCAAGGGACATCTGGTT+AGG 0.510972 1_1:+59329305 Msa0032310:CDS
TTCACAGACAAAGGATCCCT+TGG 0.512175 1_1:-59335718 None:intergenic
GGACGTTTATAAATGAGTGC+TGG 0.513398 1_1:+59329326 Msa0032310:CDS
CCAATTCAGAATTATATGAC+AGG 0.514306 1_1:+59335760 Msa0032310:CDS
TGACTCAAGAAGGAAAGGGC+TGG 0.517457 1_1:+59335670 Msa0032310:CDS
AACTCTCCACCAGTTTCTTG+AGG 0.517959 1_1:-59334827 None:intergenic
TACAGCCTTCATAGCTTCAA+GGG 0.519443 1_1:-59327450 None:intergenic
TGTAACACTTGATGCAGACT+GGG 0.519571 1_1:+59335821 Msa0032310:CDS
TAATGATAATTAATAAATTG+GGG 0.521977 1_1:+59335859 Msa0032310:CDS
GAGTTTGCTTACACTTCTCA+AGG 0.527811 1_1:+59331743 Msa0032310:CDS
TATGTCGAAGACATAACAAA+AGG 0.528469 1_1:+59328929 Msa0032310:CDS
TATGTCGAAGACATAACAAA+AGG 0.528469 1_1:+59331512 Msa0032310:CDS
TATGTCGAAGACATAACAAA+AGG 0.528469 1_1:+59334614 Msa0032310:CDS
TCTGGTGTTATTATTGCATG+TGG 0.528520 1_1:-59328753 None:intergenic
TCTGGTGTTATTATTGCATG+TGG 0.528520 1_1:-59331336 None:intergenic
TCTGGTGTTATTATTGCATG+TGG 0.528520 1_1:-59334438 None:intergenic
GACAGGATTGTGCATAGTAC+CGG 0.531414 1_1:+59335777 Msa0032310:CDS
TGCAGACTGGGGCTCGAAAG+TGG 0.532196 1_1:+59335833 Msa0032310:CDS
TATTCTGATACACATCTGAC+AGG 0.533483 1_1:-59328709 None:intergenic
TATTCTGATACACATCTGAC+AGG 0.533483 1_1:-59331292 None:intergenic
GAGATAGAAAGATTTATCCT+GGG 0.540455 1_1:+59328092 Msa0032310:CDS
AATGAGTGCTGGAGGAAATG+TGG 0.543111 1_1:+59329337 Msa0032310:CDS
TATTCTGATACACATCTGAC+AGG 0.544848 1_1:-59334394 None:intergenic
AGAAGATTTAACTTCTCCCA+AGG 0.546782 1_1:-59328813 None:intergenic
AGAAGATTTAACTTCTCCCA+AGG 0.546782 1_1:-59331396 None:intergenic
AGAAGATTTAACTTCTCCCA+AGG 0.546782 1_1:-59334498 None:intergenic
ATTTAAATCGAAATGGGTCA+AGG 0.548256 1_1:+59331453 Msa0032310:CDS
ATTTAAATCGAAATGGGTCA+AGG 0.548256 1_1:+59334555 Msa0032310:CDS
GCTCCAGTAAGTTGTCATGA+TGG 0.552655 1_1:+59327872 Msa0032310:CDS
TATTTCACTTGCTCGGATTG+CGG 0.555939 1_1:+59331640 Msa0032310:CDS
TATTTCACTTGCTCGGATTG+CGG 0.555939 1_1:+59334742 Msa0032310:CDS
CCTTTGTCTGTGAATATGCA+TGG 0.559027 1_1:+59335727 Msa0032310:CDS
GGCTCACTAAAAGCTTCCAA+TGG 0.561745 1_1:+59328668 Msa0032310:intron
CTGGTGTTATTATTGCATGT+GGG 0.563538 1_1:-59328752 None:intergenic
CTGGTGTTATTATTGCATGT+GGG 0.563538 1_1:-59331335 None:intergenic
CTGGTGTTATTATTGCATGT+GGG 0.563538 1_1:-59334437 None:intergenic
GTCTTGCCTGGAAATTTGAG+AGG 0.564658 1_1:-59328029 None:intergenic
TGTGATGCTGCATTAAGGAC+TGG 0.565305 1_1:+59328842 Msa0032310:CDS
TGTGATGCTGCATTAAGGAC+TGG 0.565305 1_1:+59331425 Msa0032310:CDS
TGTGATGCTGCATTAAGGAC+TGG 0.565305 1_1:+59334527 Msa0032310:CDS
CTTGGTAGATATAGACAACC+AGG 0.566110 1_1:+59327919 Msa0032310:CDS
GGCTCACTAATAGCTTCCAA+TGG 0.568565 1_1:+59331251 Msa0032310:intron
GCAGACTGGGGCTCGAAAGT+GGG 0.569767 1_1:+59335834 Msa0032310:CDS
GTGACATGCAGTGTGGAACT+CGG 0.570368 1_1:+59329362 Msa0032310:CDS
CAATTCAATCAAGGTTTGGA+AGG 0.575041 1_1:+59335965 Msa0032310:CDS
GACCAAACTTGAACCATGCA+AGG 0.575517 1_1:+59329291 Msa0032310:CDS
GAAGATTTAACTTCTCCCAA+GGG 0.576136 1_1:-59328812 None:intergenic
GAAGATTTAACTTCTCCCAA+GGG 0.576136 1_1:-59331395 None:intergenic
GAAGATTTAACTTCTCCCAA+GGG 0.576136 1_1:-59334497 None:intergenic
GGCTCACCAAAAGCTTCCAA+TGG 0.578868 1_1:+59334353 Msa0032310:intron
GTTTCTTGAGAGCATGCAGA+AGG 0.582200 1_1:-59331713 None:intergenic
GTAAAGAGTGCGCAGTTGAG+AGG 0.584781 1_1:+59329257 Msa0032310:intron
TGTAGGAATCTCAGAGGTCG+AGG 0.585121 1_1:+59327469 Msa0032310:CDS
GGGCTAAGCCAGGCTTCACA+TGG 0.585140 1_1:+59335879 Msa0032310:CDS
AACACTAGAAGATTTGTCCA+AGG 0.586159 1_1:+59335701 Msa0032310:CDS
GCATGCTCTCAAGAAACTGG+TGG 0.588938 1_1:+59331719 Msa0032310:CDS
ACCTAAACAGAAACTTCACT+TGG 0.589122 1_1:+59327901 Msa0032310:CDS
TATGTCTTCGACATATCGAA+AGG 0.592427 1_1:-59328921 None:intergenic
TATGTCTTCGACATATCGAA+AGG 0.592427 1_1:-59331504 None:intergenic
TATGTCTTCGACATATCGAA+AGG 0.592427 1_1:-59334606 None:intergenic
CTAACCAGATGTCCCTTGCA+TGG 0.592907 1_1:-59329304 None:intergenic
GTTTCTTGAGGGCATGCACA+AGG 0.598420 1_1:-59334815 None:intergenic
CCATGCATATTCACAGACAA+AGG 0.601347 1_1:-59335727 None:intergenic
ACTCAAGAAGGAAAGGGCTG+GGG 0.602023 1_1:+59335672 Msa0032310:CDS
ACACTAGAAGATTTGTCCAA+GGG 0.602857 1_1:+59335702 Msa0032310:CDS
GAAGCTCACAACCAATTCGC+AGG 0.603245 1_1:+59328054 Msa0032310:CDS
TCTTGCCTGGAAATTTGAGA+GGG 0.607760 1_1:-59328028 None:intergenic
TCCTGTTTAAAAGTCTTGGG+AGG 0.609380 1_1:-59327995 None:intergenic
TGACATGCAGTGTGGAACTC+GGG 0.610161 1_1:+59329363 Msa0032310:CDS
GTTTCTTGAGAGCATGCACA+AGG 0.616452 1_1:-59329130 None:intergenic
AATAACACCAGAACCAGTAA+GGG 0.617172 1_1:+59328764 Msa0032310:CDS
AATAACACCAGAACCAGTAA+GGG 0.617172 1_1:+59331347 Msa0032310:CDS
AATAACACCAGAACCAGTAA+GGG 0.617172 1_1:+59334449 Msa0032310:CDS
CTTGAAGCTATGAAGGCTGT+AGG 0.618571 1_1:+59327452 Msa0032310:CDS
TCACTATTAGAAACCGGATG+AGG 0.620193 1_1:+59330290 Msa0032310:intron
GCATGCTCTCAAGAAACTGG+TGG 0.621903 1_1:+59329136 Msa0032310:CDS
CGTTTATAAATGAGTGCTGG+AGG 0.622895 1_1:+59329329 Msa0032310:CDS
GAGTTTGCTTACACTTCACA+AGG 0.627019 1_1:+59329160 Msa0032310:CDS
GAGTTTGCTTACACTTCACA+AGG 0.627019 1_1:+59330387 Msa0032310:CDS
GAGTTTGCTTACACTTCACA+AGG 0.627019 1_1:+59334845 Msa0032310:CDS
CCTGGGGCAGCATCATCTGA+AGG 0.631336 1_1:+59328109 Msa0032310:CDS
GCATGCAGAAGGAACTGACA+AGG 0.638789 1_1:-59331702 None:intergenic
GCATGCACAAGGAACTGTCA+AGG 0.640273 1_1:-59334804 None:intergenic
GTCAAGGCAAACTCTTTCTG+AGG 0.644992 1_1:+59328886 Msa0032310:CDS
GTCAAGGCAAACTCTTTCTG+AGG 0.644992 1_1:+59331469 Msa0032310:CDS
GTCAAGGCAAACTCTTTCTG+AGG 0.644992 1_1:+59334571 Msa0032310:CDS
ACCAAACTTGAACCATGCAA+GGG 0.650598 1_1:+59329292 Msa0032310:CDS
GCGTGCTCTCAAGAAACTGG+AGG 0.653364 1_1:+59330363 Msa0032310:CDS
CTTTGTCTGTGAATATGCAT+GGG 0.663966 1_1:+59335728 Msa0032310:CDS
GCATGCCCTCAAGAAACTGG+TGG 0.665430 1_1:+59334821 Msa0032310:CDS
AGATAGAAAGATTTATCCTG+GGG 0.673209 1_1:+59328093 Msa0032310:CDS
GCATGCACAAGGAACTGACA+AGG 0.682125 1_1:-59329119 None:intergenic
GCACGCACAAGAAAATGACA+AGG 0.689258 1_1:-59330346 None:intergenic
GTAACACTTGATGCAGACTG+GGG 0.703642 1_1:+59335822 Msa0032310:CDS
GTGTTGTCTGTAGAAGACAC+TGG 0.713454 1_1:+59327968 Msa0032310:CDS
ATTAGACGAAACCAACAGTG+AGG 0.717147 1_1:+59328976 Msa0032310:CDS
ATTAGACGAAACCAACAGTG+AGG 0.717147 1_1:+59331559 Msa0032310:CDS
ATTAGACGAAACCAACAGTG+AGG 0.717147 1_1:+59334661 Msa0032310:CDS
ATTCTGATACACATCTGACA+GGG 0.718788 1_1:-59334393 None:intergenic
TGTGGATGTGACATGCAGTG+TGG 0.718965 1_1:+59329355 Msa0032310:CDS
ATTCTGATACACATCTGACA+GGG 0.723160 1_1:-59328708 None:intergenic
ATTCTGATACACATCTGACA+GGG 0.723160 1_1:-59331291 None:intergenic
GAAGGCTGTAGGAATCTCAG+AGG 0.740084 1_1:+59327463 Msa0032310:CDS
GGAACTCGGGTAGTGCAACG+AGG 0.743626 1_1:+59329376 Msa0032310:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ACAAATAAAAGTTAATTATA+AGG - chr1_1:59327762-59327781 None:intergenic 10.0%
!!! TTTGTTTTAATTTTTTGTTA+TGG + chr1_1:59330751-59330770 Msa0032310:intron 10.0%
!!! ATGAATTTTAAAAGAAAAAT+AGG + chr1_1:59331070-59331089 Msa0032310:intron 10.0%
!!! ATGAATTTTAAAAGAAAAAT+AGG + chr1_1:59331070-59331089 Msa0032310:intron 10.0%
!!! TTTGTTTTAATTTTTTGTTA+TGG + chr1_1:59330751-59330770 Msa0032310:intron 10.0%
!!! TCTTATATGTTTTTTTTTTT+TGG + chr1_1:59335432-59335451 Msa0032310:intron 10.0%
!!! CTTATATGTTTTTTTTTTTT+GGG + chr1_1:59335433-59335452 Msa0032310:intron 10.0%
!!! TTATATGTTTTTTTTTTTTG+GGG + chr1_1:59335434-59335453 Msa0032310:intron 10.0%
!!! AAAAAAAAAAATCATTTTAG+AGG - chr1_1:59335549-59335568 None:intergenic 10.0%
!! TAATGATAATTAATAAATTG+GGG + chr1_1:59335859-59335878 Msa0032310:CDS 10.0%
!!! TTTGTTTTAATTTTTTGTCA+TGG + chr1_1:59329510-59329529 Msa0032310:intron 15.0%
!! AATAAATTTAGCAACAATAA+TGG - chr1_1:59329945-59329964 None:intergenic 15.0%
!! AACATAAATGTTATTCTTAT+AGG + chr1_1:59330073-59330092 Msa0032310:intron 15.0%
!! TAAAATTTAGAAATGTGTTA+GGG + chr1_1:59330242-59330261 Msa0032310:intron 15.0%
!!! TTTTAATTTTTTGTTATGGT+TGG + chr1_1:59330755-59330774 Msa0032310:intron 15.0%
!! AAAATTCATGCAAAAAATAT+AGG - chr1_1:59331059-59331078 None:intergenic 15.0%
!!! ATTGATTATGTTATGATTTT+AGG + chr1_1:59333182-59333201 Msa0032310:intron 15.0%
!!! TTGATTATGTTATGATTTTA+GGG + chr1_1:59333183-59333202 Msa0032310:intron 15.0%
!! TGTACAAAATAAACTAAAAA+AGG - chr1_1:59333666-59333685 None:intergenic 15.0%
!! ATATCTGATTAAATAATTCA+GGG + chr1_1:59333709-59333728 Msa0032310:intron 15.0%
!!! TTTTACTTTTTTTTTCTTGT+CGG + chr1_1:59330897-59330916 Msa0032310:intron 15.0%
!! AAAATTCATGCAAAAAATAT+AGG - chr1_1:59331059-59331078 None:intergenic 15.0%
!!! TTTTAATTTTTTGTTATGGT+TGG + chr1_1:59330755-59330774 Msa0032310:intron 15.0%
!!! ACAAACTTAACTTTTTTAAT+CGG - chr1_1:59329768-59329787 None:intergenic 15.0%
!!! TATATGTTTTTTTTTTTTGG+GGG + chr1_1:59335435-59335454 Msa0032310:intron 15.0%
!! GTATCAATGATAATTAATAA+AGG + chr1_1:59335924-59335943 Msa0032310:CDS 15.0%
!! ATAAACTGTATGATAAAAAG+TGG + chr1_1:59327516-59327535 Msa0032310:intron 20.0%
!! TAAACTGTATGATAAAAAGT+GGG + chr1_1:59327517-59327536 Msa0032310:intron 20.0%
!!! TTTTTGAAGATGACAATTAT+CGG + chr1_1:59327543-59327562 Msa0032310:intron 20.0%
!!! CTTTTAGAAAGAATATACTT+AGG - chr1_1:59327831-59327850 None:intergenic 20.0%
!! GAAAAAAAAAGTAAAAGACA+TGG - chr1_1:59328294-59328313 None:intergenic 20.0%
!! AAAATTCGTGCAAAAAATAT+AGG - chr1_1:59328462-59328481 None:intergenic 20.0%
!!! CACGAATTTTAAAAGAAAAT+AGG + chr1_1:59328472-59328491 Msa0032310:intron 20.0%
!!! CAACAATATATGTTTTTCTT+AGG - chr1_1:59328578-59328597 None:intergenic 20.0%
!!! TTTTCTTGTTGATTTTCTAT+AGG + chr1_1:59328647-59328666 Msa0032310:intron 20.0%
!!! CATGGAATGTAATTAAATTT+TGG - chr1_1:59329007-59329026 None:intergenic 20.0%
!! AAAAAAACTCTCTTCAAATA+AGG - chr1_1:59329447-59329466 None:intergenic 20.0%
!!! TTTTAATTTTTTGTCATGGT+TGG + chr1_1:59329514-59329533 Msa0032310:intron 20.0%
!! ATATCTTCATTATACTATAG+AGG - chr1_1:59329718-59329737 None:intergenic 20.0%
!! TTTGAATTTCTAACTTGATT+AGG - chr1_1:59329741-59329760 None:intergenic 20.0%
!! GATTAAAAAAGTTAAGTTTG+TGG + chr1_1:59329767-59329786 Msa0032310:intron 20.0%
!! AAGAATTTGTCCTATTTAAT+TGG + chr1_1:59330047-59330066 Msa0032310:intron 20.0%
!!! TTATGTTTTGCCAATTAAAT+AGG - chr1_1:59330060-59330079 None:intergenic 20.0%
!! TGTTAAAAGTCAATTTCTTA+AGG + chr1_1:59330100-59330119 Msa0032310:intron 20.0%
!! GTTAAAAGTCAATTTCTTAA+GGG + chr1_1:59330101-59330120 Msa0032310:intron 20.0%
!! GACACTAAAGAAATTTAAAA+AGG - chr1_1:59330164-59330183 None:intergenic 20.0%
!!! CACATTTCTAAATTTTAGTT+AGG - chr1_1:59330239-59330258 None:intergenic 20.0%
!! CTAAAATTTAGAAATGTGTT+AGG + chr1_1:59330241-59330260 Msa0032310:intron 20.0%
!! TTGATGAAATTATCTAGTTA+CGG - chr1_1:59331129-59331148 None:intergenic 20.0%
!!! CATGGAATGTAATTAAATTT+TGG - chr1_1:59329007-59329026 None:intergenic 20.0%
!! AAAAAAAACCTCTTCAAATA+AGG - chr1_1:59332030-59332049 None:intergenic 20.0%
!! ATATGAATGCAATATGTTTA+AGG + chr1_1:59332222-59332241 Msa0032310:intron 20.0%
!! ATATCTTCATTATACTATAG+AGG - chr1_1:59329718-59329737 None:intergenic 20.0%
!! GATTAAAAAAGTTAAGTTTG+TGG + chr1_1:59329767-59329786 Msa0032310:intron 20.0%
!! AAAACGAAAACACAAAAAAA+CGG - chr1_1:59332867-59332886 None:intergenic 20.0%
!!! TTGTTTTGATTATTCGTTTT+AGG + chr1_1:59332972-59332991 Msa0032310:intron 20.0%
!!! TGTTTTGATTATTCGTTTTA+GGG + chr1_1:59332973-59332992 Msa0032310:intron 20.0%
!!! AGTATGACTCTTAATTTTTA+AGG + chr1_1:59333118-59333137 Msa0032310:intron 20.0%
!!! TTAATTTTTAAGGATCGTTT+TGG + chr1_1:59333128-59333147 Msa0032310:intron 20.0%
!! GCAATTAGTATATTAATTGA+AGG + chr1_1:59333150-59333169 Msa0032310:intron 20.0%
!! GATATCTGATTAAATAATTC+AGG + chr1_1:59333708-59333727 Msa0032310:intron 20.0%
!!! TGGTTTTTTTATATAACGTA+AGG + chr1_1:59333742-59333761 Msa0032310:intron 20.0%
!! ATAGATAGAGAAATAATTCA+GGG + chr1_1:59333774-59333793 Msa0032310:intron 20.0%
!! TGATGAAAATAATCTAGTTA+CGG - chr1_1:59334216-59334235 None:intergenic 20.0%
!!! TTTTCTTGTTGATTTTCTAT+AGG + chr1_1:59328647-59328666 Msa0032310:intron 20.0%
!!! CATGGAATGTAATTAAATTT+TGG - chr1_1:59329007-59329026 None:intergenic 20.0%
!! AAAAAATCTCTCTTCAAATA+AGG - chr1_1:59330681-59330700 None:intergenic 20.0%
!! AGGTATGGAATAAATAAATA+GGG - chr1_1:59335319-59335338 None:intergenic 20.0%
!! AAGGTATGGAATAAATAAAT+AGG - chr1_1:59335320-59335339 None:intergenic 20.0%
!! ATATCTTCGTTATACTATAA+AGG - chr1_1:59335339-59335358 None:intergenic 20.0%
!! TCTAAATTTCAAACTTGATT+AGG - chr1_1:59335362-59335381 None:intergenic 20.0%
!! GATTAAAAAAGTTAAGTTTG+TGG + chr1_1:59329767-59329786 Msa0032310:intron 20.0%
!!! ATATGTTTTTTTTTTTTGGG+GGG + chr1_1:59335436-59335455 Msa0032310:intron 20.0%
!! AATAAGTTTAGCAACAATAA+CGG - chr1_1:59335599-59335618 None:intergenic 20.0%
!! ATATTTTTCCTCTGAATAGA+AGG - chr1_1:59328169-59328188 None:intergenic 25.0%
!! GATCAGAAGTTTAAAGTATA+AGG + chr1_1:59328196-59328215 Msa0032310:intron 25.0%
! ATGAATATAATCTAGTTACC+GGG - chr1_1:59328529-59328548 None:intergenic 25.0%
! GATGAATATAATCTAGTTAC+CGG - chr1_1:59328530-59328549 None:intergenic 25.0%
! AATATCAATATTACCCTTAC+TGG - chr1_1:59328780-59328799 None:intergenic 25.0%
! AGTAAGGGTAATATTGATAT+TGG + chr1_1:59328779-59328798 Msa0032310:CDS 25.0%
!!! GCTTGAATTTTAATCGAAAT+GGG + chr1_1:59328864-59328883 Msa0032310:CDS 25.0%
! ATGTTAATATTTCACTTGCT+CGG + chr1_1:59329050-59329069 Msa0032310:CDS 25.0%
! AATAGTTTACCTGCAATTTA+CGG - chr1_1:59329408-59329427 None:intergenic 25.0%
! ATGAGATTTGCAATATGTTT+AGG + chr1_1:59329555-59329574 Msa0032310:intron 25.0%
! TGAGATTTGCAATATGTTTA+GGG + chr1_1:59329556-59329575 Msa0032310:intron 25.0%
! ATACGAATGCAATATGTTTA+AGG + chr1_1:59329656-59329675 Msa0032310:intron 25.0%
! TTCATTATACTATAGAGGTA+TGG - chr1_1:59329713-59329732 None:intergenic 25.0%
!! AATAAGAATCACCATTTTAC+CGG - chr1_1:59329914-59329933 None:intergenic 25.0%
!! TAATGGTTCTATATATGGAT+GGG + chr1_1:59330195-59330214 Msa0032310:intron 25.0%
! ATACACATAATGATGATACT+GGG - chr1_1:59330463-59330482 None:intergenic 25.0%
! AATACACATAATGATGATAC+TGG - chr1_1:59330464-59330483 None:intergenic 25.0%
! AATAGTTTACCTGCAATTTA+CGG - chr1_1:59329408-59329427 None:intergenic 25.0%
! TATGAGAAGATTGAAGTATA+AGG + chr1_1:59330795-59330814 Msa0032310:intron 25.0%
! AAAGAAAAATAGGTTCGAAA+AGG + chr1_1:59331080-59331099 Msa0032310:intron 25.0%
! AAGAAAAATAGGTTCGAAAA+GGG + chr1_1:59331081-59331100 Msa0032310:intron 25.0%
! TGATGAAATTATCTAGTTAC+GGG - chr1_1:59331128-59331147 None:intergenic 25.0%
!! CAACAATATATGCTTTTCTT+AGG - chr1_1:59331172-59331191 None:intergenic 25.0%
! AATATCAATATTACCCTTAC+TGG - chr1_1:59328780-59328799 None:intergenic 25.0%
! AGTAAGGGTAATATTGATAT+TGG + chr1_1:59328779-59328798 Msa0032310:CDS 25.0%
! GCTTGAATTTAAATCGAAAT+GGG + chr1_1:59331447-59331466 Msa0032310:CDS 25.0%
! ATGTTAATATTTCACTTGCT+CGG + chr1_1:59329050-59329069 Msa0032310:CDS 25.0%
! AATAGTTTACCTGCAATTTA+CGG - chr1_1:59329408-59329427 None:intergenic 25.0%
! TTCATTATACTATAGAGGTA+TGG - chr1_1:59329713-59329732 None:intergenic 25.0%
! TTGATATTTCGCATAATTGA+GGG - chr1_1:59332414-59332433 None:intergenic 25.0%
!!! ATTATTCGTTTTAGGGTTTT+GGG + chr1_1:59332980-59332999 Msa0032310:intron 25.0%
! TTGATTGAAATTGCAATTTC+AGG + chr1_1:59333212-59333231 Msa0032310:intron 25.0%
! ATAAACTCCATGAATTTAGT+AGG - chr1_1:59333393-59333412 None:intergenic 25.0%
!! ATGGAGTTTAATAGATGTTT+TGG + chr1_1:59333447-59333466 Msa0032310:intron 25.0%
!!! GTTTTGGATTTGTCATATTT+AGG + chr1_1:59333463-59333482 Msa0032310:intron 25.0%
! GTGAAACTGAAATATTACAT+AGG - chr1_1:59333630-59333649 None:intergenic 25.0%
!! TTTTGTACACATATGTTTCA+AGG + chr1_1:59333677-59333696 Msa0032310:intron 25.0%
! GATAGATAGAGAAATAATTC+AGG + chr1_1:59333773-59333792 Msa0032310:intron 25.0%
! TTGGTTTAACTAATGAAAAG+AGG - chr1_1:59333855-59333874 None:intergenic 25.0%
!!! TCTTGGGTTTTTTAAAGTAT+TGG + chr1_1:59333906-59333925 Msa0032310:intron 25.0%
! AAAGAAAAATAGGTTCGAAA+AGG + chr1_1:59331080-59331099 Msa0032310:intron 25.0%
! AAGAAAAATAGGTTCGAAAA+GGG + chr1_1:59331081-59331100 Msa0032310:intron 25.0%
! ATGAAAATAATCTAGTTACG+GGG - chr1_1:59334214-59334233 None:intergenic 25.0%
! GATGAAAATAATCTAGTTAC+GGG - chr1_1:59334215-59334234 None:intergenic 25.0%
!! CAACAATATATGCTTTTCTT+AGG - chr1_1:59331172-59331191 None:intergenic 25.0%
! AATATCAATATTACCCTTAC+TGG - chr1_1:59328780-59328799 None:intergenic 25.0%
! AGTAAGGGTAATATTGATAT+TGG + chr1_1:59328779-59328798 Msa0032310:CDS 25.0%
! GCTTGAATTTAAATCGAAAT+GGG + chr1_1:59331447-59331466 Msa0032310:CDS 25.0%
! ATGTTAATATTTCACTTGCT+CGG + chr1_1:59329050-59329069 Msa0032310:CDS 25.0%
! ATGAGATTTGCAATATGTTT+AGG + chr1_1:59329555-59329574 Msa0032310:intron 25.0%
! TGAGATTTGCAATATGTTTA+GGG + chr1_1:59329556-59329575 Msa0032310:intron 25.0%
! TGTTATGTTAGATGAAGTTA+TGG + chr1_1:59335247-59335266 Msa0032310:intron 25.0%
! ATACGATTGCAATATGTTTA+AGG + chr1_1:59335273-59335292 Msa0032310:intron 25.0%
! GGTATGGAATAAATAAATAG+GGG - chr1_1:59335318-59335337 None:intergenic 25.0%
! TTCGTTATACTATAAAGGTA+TGG - chr1_1:59335334-59335353 None:intergenic 25.0%
! CTGAAGATTAAAAGATAAGA+AGG - chr1_1:59335643-59335662 None:intergenic 25.0%
!! CTTCTTATCTTTTAATCTTC+AGG + chr1_1:59335641-59335660 Msa0032310:intron 25.0%
! CAATGATAATTAATAAAGGC+TGG + chr1_1:59335928-59335947 Msa0032310:CDS 25.0%
TTATACAACTTTGACAACAC+CGG - chr1_1:59327500-59327519 None:intergenic 30.0%
ACAACAGATCAAATCAATGT+GGG - chr1_1:59327691-59327710 None:intergenic 30.0%
TATAAGGACAAAATGTTAGC+AGG - chr1_1:59327746-59327765 None:intergenic 30.0%
GTTTCCTGTTTAAAAGTCTT+GGG - chr1_1:59328001-59328020 None:intergenic 30.0%
AGTTTCCTGTTTAAAAGTCT+TGG - chr1_1:59328002-59328021 None:intergenic 30.0%
AGAGATAGAAAGATTTATCC+TGG + chr1_1:59328091-59328110 Msa0032310:CDS 30.0%
GAGATAGAAAGATTTATCCT+GGG + chr1_1:59328092-59328111 Msa0032310:CDS 30.0%
AGATAGAAAGATTTATCCTG+GGG + chr1_1:59328093-59328112 Msa0032310:CDS 30.0%
CGTTGTAAAAATCCAATTGA+TGG + chr1_1:59328133-59328152 Msa0032310:intron 30.0%
AGGACAAATGAAAGAAAAAC+GGG - chr1_1:59328375-59328394 None:intergenic 30.0%
CAGGACAAATGAAAGAAAAA+CGG - chr1_1:59328376-59328395 None:intergenic 30.0%
AAAAGAAAATAGGTCCGAAA+AGG + chr1_1:59328482-59328501 Msa0032310:intron 30.0%
AAAGAAAATAGGTCCGAAAA+GGG + chr1_1:59328483-59328502 Msa0032310:intron 30.0%
TTTGACAGTAAGATTTCCAT+TGG - chr1_1:59328687-59328706 None:intergenic 30.0%
TAAATTGTGATGCTGCATTA+AGG + chr1_1:59328837-59328856 Msa0032310:CDS 30.0%
!! GGCTTGAATTTTAATCGAAA+TGG + chr1_1:59328863-59328882 Msa0032310:CDS 30.0%
!! ATTTTAATCGAAATGGGTCA+AGG + chr1_1:59328870-59328889 Msa0032310:CDS 30.0%
TATGTCGAAGACATAACAAA+AGG + chr1_1:59328929-59328948 Msa0032310:CDS 30.0%
CTTTGATACATTGTGTTACA+TGG - chr1_1:59329025-59329044 None:intergenic 30.0%
TTAAACAGATTGCATGTCTA+TGG + chr1_1:59329201-59329220 Msa0032310:intron 30.0%
! ATACACATAATGATGATGCT+GGG - chr1_1:59329236-59329255 None:intergenic 30.0%
! AATACACATAATGATGATGC+TGG - chr1_1:59329237-59329256 None:intergenic 30.0%
!! ATGGTTGGTTGATGAATTTA+TGG + chr1_1:59329529-59329548 Msa0032310:intron 30.0%
ATTTGCAATATGTTTAGGGA+AGG + chr1_1:59329560-59329579 Msa0032310:intron 30.0%
TCTTTGAACTTATCTGTTGA+TGG + chr1_1:59329630-59329649 Msa0032310:intron 30.0%
GAGGTATGGAATATAAATAG+AGG - chr1_1:59329699-59329718 None:intergenic 30.0%
! CAATCTCCTATATGTTCTTT+TGG + chr1_1:59329806-59329825 Msa0032310:intron 30.0%
AGTGATCCAAAAGAACATAT+AGG - chr1_1:59329815-59329834 None:intergenic 30.0%
TTTGGATCACTACATTACTT+TGG + chr1_1:59329824-59329843 Msa0032310:intron 30.0%
! GTTTGTTAAATCCGGTAAAA+TGG + chr1_1:59329900-59329919 Msa0032310:intron 30.0%
CTGAAGAATAAGAGATAAGA+AGG - chr1_1:59329989-59330008 None:intergenic 30.0%
CTTCTTATCTCTTATTCTTC+AGG + chr1_1:59329987-59330006 Msa0032310:intron 30.0%
!! TTTTTGACTCAAGAAGGAAA+GGG + chr1_1:59330012-59330031 Msa0032310:intron 30.0%
AAAAGTCAATTTCTTAAGGG+AGG + chr1_1:59330104-59330123 Msa0032310:intron 30.0%
! CAGACTAATGGTTCTATATA+TGG + chr1_1:59330190-59330209 Msa0032310:intron 30.0%
! CTAATGGTTCTATATATGGA+TGG + chr1_1:59330194-59330213 Msa0032310:intron 30.0%
!! TTCTATATATGGATGGGTTA+GGG + chr1_1:59330201-59330220 Msa0032310:intron 30.0%
ATTTAGAAATGTGTTAGGGT+TGG + chr1_1:59330246-59330265 Msa0032310:intron 30.0%
TTTAGAAATGTGTTAGGGTT+GGG + chr1_1:59330247-59330266 Msa0032310:intron 30.0%
TTTCTAATAGTGAGTCAGTT+GGG - chr1_1:59330283-59330302 None:intergenic 30.0%
TTTAACAGATTGCATGTCTA+TGG + chr1_1:59330428-59330447 Msa0032310:intron 30.0%
TACACATAATGATGATACTG+GGG - chr1_1:59330462-59330481 None:intergenic 30.0%
TCTGGTTAGGAAGTTTATAA+AGG + chr1_1:59330545-59330564 Msa0032310:intron 30.0%
!! ATGGTTGGTAGATGAATTTA+AGG + chr1_1:59330770-59330789 Msa0032310:intron 30.0%
AGGACAAATGAAAGAAAAAC+GGG - chr1_1:59328375-59328394 None:intergenic 30.0%
CAGGACAAATGAAAGAAAAA+CGG - chr1_1:59328376-59328395 None:intergenic 30.0%
GATGAAATTATCTAGTTACG+GGG - chr1_1:59331127-59331146 None:intergenic 30.0%
TTTGACAGTAAGATTTCCAT+TGG - chr1_1:59328687-59328706 None:intergenic 30.0%
TAAATTGTGATGCTGCATTA+AGG + chr1_1:59328837-59328856 Msa0032310:CDS 30.0%
GGCTTGAATTTAAATCGAAA+TGG + chr1_1:59331446-59331465 Msa0032310:CDS 30.0%
ATTTAAATCGAAATGGGTCA+AGG + chr1_1:59331453-59331472 Msa0032310:CDS 30.0%
TATGTCGAAGACATAACAAA+AGG + chr1_1:59328929-59328948 Msa0032310:CDS 30.0%
CTTTGATACATTGTGTTACA+TGG - chr1_1:59329025-59329044 None:intergenic 30.0%
TTAAACAGATTGCATGTCTA+TGG + chr1_1:59329201-59329220 Msa0032310:intron 30.0%
! ATACACATAATGATGATGCA+GGG - chr1_1:59331819-59331838 None:intergenic 30.0%
! AATACACATAATGATGATGC+AGG - chr1_1:59329237-59329256 None:intergenic 30.0%
!!! TTGATGAGAGTTTTTTGTCA+TGG + chr1_1:59332076-59332095 Msa0032310:intron 30.0%
!! ATGGTTGGTTGATGAATTTA+TGG + chr1_1:59329529-59329548 Msa0032310:intron 30.0%
! AACTGTTTTCTGAATACTCT+TGG + chr1_1:59329613-59329632 Msa0032310:intron 30.0%
GAGGTATGGAATATAAATAG+AGG - chr1_1:59329699-59329718 None:intergenic 30.0%
TGAAGATATCCTAATCAAGT+TGG + chr1_1:59329729-59329748 Msa0032310:intron 30.0%
TCTGAATTTCCAACTTGATT+AGG - chr1_1:59332309-59332328 None:intergenic 30.0%
AAATTCAGGGACTAATTTGA+TGG - chr1_1:59332370-59332389 None:intergenic 30.0%
GTTGATATTTCGCATAATTG+AGG - chr1_1:59332415-59332434 None:intergenic 30.0%
AGGGACTAATTTGATTGAAT+TGG + chr1_1:59332564-59332583 Msa0032310:intron 30.0%
! AAATAAGAAGAAGGAGGTAT+GGG - chr1_1:59332654-59332673 None:intergenic 30.0%
!! GATGTTCTGAAATAAGAAGA+AGG - chr1_1:59332663-59332682 None:intergenic 30.0%
AACTTGATAAACAACAGGAA+AGG - chr1_1:59332816-59332835 None:intergenic 30.0%
ACAGAAACTTGATAAACAAC+AGG - chr1_1:59332821-59332840 None:intergenic 30.0%
CAAAAAAACGGACAAAAACA+GGG - chr1_1:59332855-59332874 None:intergenic 30.0%
ACAAAAAAACGGACAAAAAC+AGG - chr1_1:59332856-59332875 None:intergenic 30.0%
CAACAAACAAACAAAGAACA+AGG - chr1_1:59332938-59332957 None:intergenic 30.0%
!!! GATTATTCGTTTTAGGGTTT+TGG + chr1_1:59332979-59332998 Msa0032310:intron 30.0%
TTTGAATTATGCCCCATAAT+TGG + chr1_1:59333490-59333509 Msa0032310:intron 30.0%
TTGAATTATGCCCCATAATT+GGG + chr1_1:59333491-59333510 Msa0032310:intron 30.0%
CAAAAAGAAACCCAATTATG+GGG - chr1_1:59333504-59333523 None:intergenic 30.0%
GCAAAAAGAAACCCAATTAT+GGG - chr1_1:59333505-59333524 None:intergenic 30.0%
AGCAAAAAGAAACCCAATTA+TGG - chr1_1:59333506-59333525 None:intergenic 30.0%
! CTTTTGCCTATGTAATTTCT+CGG + chr1_1:59333576-59333595 Msa0032310:intron 30.0%
ATAAGTCCGAGAAATTACAT+AGG - chr1_1:59333585-59333604 None:intergenic 30.0%
ATTACATAGGCATAAGTCAT+AGG - chr1_1:59333617-59333636 None:intergenic 30.0%
TAATTCAGGGACTTATTTGA+TGG + chr1_1:59333722-59333741 Msa0032310:intron 30.0%
TCATTAGTTAAACCAACCTT+TGG + chr1_1:59333859-59333878 Msa0032310:intron 30.0%
TCTAACAATACAAGTTGCAA+TGG + chr1_1:59333933-59333952 Msa0032310:intron 30.0%
TTTGACAGTAAGATTTCCAT+TGG - chr1_1:59328687-59328706 None:intergenic 30.0%
TAAATTGTGATGCTGCATTA+AGG + chr1_1:59328837-59328856 Msa0032310:CDS 30.0%
GGCTTGAATTTAAATCGAAA+TGG + chr1_1:59331446-59331465 Msa0032310:CDS 30.0%
ATTTAAATCGAAATGGGTCA+AGG + chr1_1:59331453-59331472 Msa0032310:CDS 30.0%
TATGTCGAAGACATAACAAA+AGG + chr1_1:59328929-59328948 Msa0032310:CDS 30.0%
CTTTGATACATTGTGTTACA+TGG - chr1_1:59329025-59329044 None:intergenic 30.0%
TTTAACAGATTGCATGTCTA+TGG + chr1_1:59330428-59330447 Msa0032310:intron 30.0%
! ATACACATAATGATGATGCT+GGG - chr1_1:59329236-59329255 None:intergenic 30.0%
! AATACACATAATGATGATGC+TGG - chr1_1:59329237-59329256 None:intergenic 30.0%
AGAATAGTTTACCTGCAATT+AGG - chr1_1:59329410-59329429 None:intergenic 30.0%
!! ATGGTTGGTAGATGAATTTA+AGG + chr1_1:59330770-59330789 Msa0032310:intron 30.0%
ATTTGCAATATGTTTAGGGA+AGG + chr1_1:59329560-59329579 Msa0032310:intron 30.0%
AGAGGATTTAACAAACAATG+TGG - chr1_1:59335531-59335550 None:intergenic 30.0%
!! TTTTTGACTCAAGAAGGAAA+GGG + chr1_1:59330012-59330031 Msa0032310:intron 30.0%
CCTGTCATATAATTCTGAAT+TGG - chr1_1:59335763-59335782 None:intergenic 30.0%
CCAATTCAGAATTATATGAC+AGG + chr1_1:59335760-59335779 Msa0032310:CDS 30.0%
ATATGTATGTCTATCATTGC+CGG - chr1_1:59335799-59335818 None:intergenic 30.0%
ATTAATAAAGGCTGGAAGAT+TGG + chr1_1:59335936-59335955 Msa0032310:CDS 30.0%
AGATGCATACATTGAGTCAA+AGG + chr1_1:59327574-59327593 Msa0032310:intron 35.0%
ACATTGAGTCAAAGGAAGAT+AGG + chr1_1:59327582-59327601 Msa0032310:intron 35.0%
CATTGAGTCAAAGGAAGATA+GGG + chr1_1:59327583-59327602 Msa0032310:intron 35.0%
ACTTTGAGTCAAAGGAAGAT+AGG + chr1_1:59327609-59327628 Msa0032310:intron 35.0%
CTTTGAGTCAAAGGAAGATA+GGG + chr1_1:59327610-59327629 Msa0032310:intron 35.0%
CACAACAGATCAAATCAATG+TGG - chr1_1:59327692-59327711 None:intergenic 35.0%
ACCTAAACAGAAACTTCACT+TGG + chr1_1:59327901-59327920 Msa0032310:CDS 35.0%
ACCAAGTGAAGTTTCTGTTT+AGG - chr1_1:59327905-59327924 None:intergenic 35.0%
! TTTTCCTCTGAATAGAAGGA+TGG - chr1_1:59328165-59328184 None:intergenic 35.0%
GATAAACCTAAGTTTCATCC+CGG + chr1_1:59328223-59328242 Msa0032310:intron 35.0%
TCTGTTTCAACATGTTGCAA+TGG + chr1_1:59328247-59328266 Msa0032310:intron 35.0%
GTTGCAATGGTAATCATGAT+AGG + chr1_1:59328260-59328279 Msa0032310:intron 35.0%
CTATCAATTTGAGTCCTGAA+AGG + chr1_1:59328346-59328365 Msa0032310:intron 35.0%
TTTCATTTGTCCTGTCTGAA+TGG + chr1_1:59328382-59328401 Msa0032310:intron 35.0%
! ATTACGAACCAACTGATTTC+AGG - chr1_1:59328429-59328448 None:intergenic 35.0%
! TGTCAAAATTGCTCCCTTTT+CGG - chr1_1:59328499-59328518 None:intergenic 35.0%
!! CAATTTTGACATCTTGTACC+CGG + chr1_1:59328508-59328527 Msa0032310:intron 35.0%
ATTCTGATACACATCTGACA+GGG - chr1_1:59328711-59328730 None:intergenic 35.0%
TATTCTGATACACATCTGAC+AGG - chr1_1:59328712-59328731 None:intergenic 35.0%
!! CTGGTGTTATTATTGCATGT+GGG - chr1_1:59328755-59328774 None:intergenic 35.0%
!! TCTGGTGTTATTATTGCATG+TGG - chr1_1:59328756-59328775 None:intergenic 35.0%
TAATAACACCAGAACCAGTA+AGG + chr1_1:59328763-59328782 Msa0032310:CDS 35.0%
AATAACACCAGAACCAGTAA+GGG + chr1_1:59328764-59328783 Msa0032310:CDS 35.0%
!! AATATTACCCTTACTGGTTC+TGG - chr1_1:59328774-59328793 None:intergenic 35.0%
! GAAGATTTAACTTCTCCCAA+GGG - chr1_1:59328815-59328834 None:intergenic 35.0%
! AGAAGATTTAACTTCTCCCA+AGG - chr1_1:59328816-59328835 None:intergenic 35.0%
TATGTCTTCGACATATCGAA+AGG - chr1_1:59328924-59328943 None:intergenic 35.0%
!! TTTTGGAAAATCCTCACTGT+TGG - chr1_1:59328990-59329009 None:intergenic 35.0%
TATTTCACTTGCTCGGATTA+CGG + chr1_1:59329057-59329076 Msa0032310:CDS 35.0%
AGATTGCATGTCTATGGTAA+AGG + chr1_1:59329207-59329226 Msa0032310:intron 35.0%
! TACACATAATGATGATGCTG+GGG - chr1_1:59329235-59329254 None:intergenic 35.0%
! GCCACATTGTTTGTTAAATC+CGG + chr1_1:59329892-59329911 Msa0032310:intron 35.0%
ACCGGATTTAACAAACAATG+TGG - chr1_1:59329896-59329915 None:intergenic 35.0%
!! GTTTTTGACTCAAGAAGGAA+AGG + chr1_1:59330011-59330030 Msa0032310:intron 35.0%
! TAGAACCATTAGTCTGCATT+AGG - chr1_1:59330186-59330205 None:intergenic 35.0%
! GTTCTATATATGGATGGGTT+AGG + chr1_1:59330200-59330219 Msa0032310:intron 35.0%
!! ATGGGTTAGGGTCTAAAAAT+CGG + chr1_1:59330213-59330232 Msa0032310:intron 35.0%
GTTTCTAATAGTGAGTCAGT+TGG - chr1_1:59330284-59330303 None:intergenic 35.0%
! ACTGACTCACTATTAGAAAC+CGG + chr1_1:59330284-59330303 Msa0032310:intron 35.0%
AGATTGCATGTCTATGGTAA+AGG + chr1_1:59329207-59329226 Msa0032310:intron 35.0%
CATTCTTAGTCCTCTCAATT+GGG - chr1_1:59330497-59330516 None:intergenic 35.0%
TCATTCTTAGTCCTCTCAAT+TGG - chr1_1:59330498-59330517 None:intergenic 35.0%
!! AGTTTATAAAGGAGTGCTGA+AGG + chr1_1:59330556-59330575 Msa0032310:intron 35.0%
GATAAACCTAAGTTTCATCC+CGG + chr1_1:59328223-59328242 Msa0032310:intron 35.0%
TATGTTTCGACAAGTTGCAA+TGG + chr1_1:59330846-59330865 Msa0032310:intron 35.0%
GTTGCAATGGTAATCATGAT+AGG + chr1_1:59328260-59328279 Msa0032310:intron 35.0%
CTATCAATTTGAGTCCTGAA+AGG + chr1_1:59328346-59328365 Msa0032310:intron 35.0%
TTTCATTTGTCCTGTCTGAA+TGG + chr1_1:59328382-59328401 Msa0032310:intron 35.0%
GTGGAGATCTTTAAATCAGT+TGG + chr1_1:59331015-59331034 Msa0032310:intron 35.0%
!! GCTGCTTTGTGATTTTCTAT+AGG + chr1_1:59331230-59331249 Msa0032310:intron 35.0%
ATTCTGATACACATCTGACA+GGG - chr1_1:59328711-59328730 None:intergenic 35.0%
TATTCTGATACACATCTGAC+AGG - chr1_1:59328712-59328731 None:intergenic 35.0%
!! CTGGTGTTATTATTGCATGT+GGG - chr1_1:59328755-59328774 None:intergenic 35.0%
!! TCTGGTGTTATTATTGCATG+TGG - chr1_1:59328756-59328775 None:intergenic 35.0%
TAATAACACCAGAACCAGTA+AGG + chr1_1:59328763-59328782 Msa0032310:CDS 35.0%
AATAACACCAGAACCAGTAA+GGG + chr1_1:59328764-59328783 Msa0032310:CDS 35.0%
!! AATATTACCCTTACTGGTTC+TGG - chr1_1:59328774-59328793 None:intergenic 35.0%
! GAAGATTTAACTTCTCCCAA+GGG - chr1_1:59328815-59328834 None:intergenic 35.0%
! AGAAGATTTAACTTCTCCCA+AGG - chr1_1:59328816-59328835 None:intergenic 35.0%
TATGTCTTCGACATATCGAA+AGG - chr1_1:59328924-59328943 None:intergenic 35.0%
!! TTTTGGAAAATCCTCACTGT+TGG - chr1_1:59328990-59329009 None:intergenic 35.0%
AGATTGCATGTCTATGGTAA+AGG + chr1_1:59329207-59329226 Msa0032310:intron 35.0%
! TACACATAATGATGATGCAG+GGG - chr1_1:59331818-59331837 None:intergenic 35.0%
CATTCTTAGTCCTCTCAATT+GGG - chr1_1:59330497-59330516 None:intergenic 35.0%
TCATTCTTAGTCCTCTCAAT+TGG - chr1_1:59330498-59330517 None:intergenic 35.0%
TCTGGTTAGGACGTTTATAA+AGG + chr1_1:59329318-59329337 Msa0032310:CDS 35.0%
AAGTTTAAGCCGTAAATTGC+AGG + chr1_1:59331979-59331998 Msa0032310:intron 35.0%
! AACTTGCACCTTATTTGAAG+AGG + chr1_1:59329436-59329455 Msa0032310:intron 35.0%
!!! TGAGAGTTTTTTGTCATGGT+TGG + chr1_1:59332080-59332099 Msa0032310:intron 35.0%
ATTCGCAATATGTTTAGCGA+AGG + chr1_1:59332126-59332145 Msa0032310:intron 35.0%
TCTTGGAACTTATCTGTTGA+TGG + chr1_1:59332196-59332215 Msa0032310:intron 35.0%
TATTTCGCATAATTGAGGGA+CGG - chr1_1:59332410-59332429 None:intergenic 35.0%
GAAATAAGAAGAAGGAGGTA+TGG - chr1_1:59332655-59332674 None:intergenic 35.0%
!! GTTCTGAAATAAGAAGAAGG+AGG - chr1_1:59332660-59332679 None:intergenic 35.0%
!! AAAATGGAGGAAGTTTTAGC+GGG - chr1_1:59332711-59332730 None:intergenic 35.0%
!! GAAAATGGAGGAAGTTTTAG+CGG - chr1_1:59332712-59332731 None:intergenic 35.0%
!! AGATGATGATGATTTTGGAG+GGG - chr1_1:59332736-59332755 None:intergenic 35.0%
!! GAGATGATGATGATTTTGGA+GGG - chr1_1:59332737-59332756 None:intergenic 35.0%
TTCAAAAACGTCAGAATCGT+CGG - chr1_1:59332759-59332778 None:intergenic 35.0%
!!! TTTTGAAGTTTGTGTGTTCG+CGG + chr1_1:59332772-59332791 Msa0032310:intron 35.0%
!! AAATTTGAAAGTGTTGTGCC+TGG + chr1_1:59333014-59333033 Msa0032310:intron 35.0%
GACTCAACCTACTAAATTCA+TGG + chr1_1:59333383-59333402 Msa0032310:intron 35.0%
AAGCATAGAATGGTCTTCTT+GGG + chr1_1:59333890-59333909 Msa0032310:intron 35.0%
GTTGCAATGGTAATCATGAT+AGG + chr1_1:59328260-59328279 Msa0032310:intron 35.0%
AGGACAAATGAAAGGTAAAC+GGG - chr1_1:59334059-59334078 None:intergenic 35.0%
CAGGACAAATGAAAGGTAAA+CGG - chr1_1:59334060-59334079 None:intergenic 35.0%
ATTCAGACAGGACAAATGAA+AGG - chr1_1:59328383-59328402 None:intergenic 35.0%
TTTCATTTGTCCTGTCTGAA+TGG + chr1_1:59328382-59328401 Msa0032310:intron 35.0%
GTGGAGATCTTTAAATCAGT+TGG + chr1_1:59331015-59331034 Msa0032310:intron 35.0%
! AGATTTCCATTGGAAGCTTT+TGG - chr1_1:59328677-59328696 None:intergenic 35.0%
ATTCTGATACACATCTGACA+GGG - chr1_1:59328711-59328730 None:intergenic 35.0%
TATTCTGATACACATCTGAC+AGG - chr1_1:59328712-59328731 None:intergenic 35.0%
!! CTGGTGTTATTATTGCATGT+GGG - chr1_1:59328755-59328774 None:intergenic 35.0%
!! TCTGGTGTTATTATTGCATG+TGG - chr1_1:59328756-59328775 None:intergenic 35.0%
TAATAACACCAGAACCAGTA+AGG + chr1_1:59328763-59328782 Msa0032310:CDS 35.0%
AATAACACCAGAACCAGTAA+GGG + chr1_1:59328764-59328783 Msa0032310:CDS 35.0%
!! AATATTACCCTTACTGGTTC+TGG - chr1_1:59328774-59328793 None:intergenic 35.0%
! GAAGATTTAACTTCTCCCAA+GGG - chr1_1:59328815-59328834 None:intergenic 35.0%
! AGAAGATTTAACTTCTCCCA+AGG - chr1_1:59328816-59328835 None:intergenic 35.0%
TATGTCTTCGACATATCGAA+AGG - chr1_1:59328924-59328943 None:intergenic 35.0%
!! TTTTGGAAAATCCTCACTGT+TGG - chr1_1:59328990-59329009 None:intergenic 35.0%
AGATTGCATGTCTATGGTAA+AGG + chr1_1:59329207-59329226 Msa0032310:intron 35.0%
! TACACATAATGATGATGCTG+GGG - chr1_1:59329235-59329254 None:intergenic 35.0%
AACAGTTCTCTGAATACACT+TGG + chr1_1:59335173-59335192 Msa0032310:intron 35.0%
!! GTTTTTGACTCAAGAAGGAA+AGG + chr1_1:59330011-59330030 Msa0032310:intron 35.0%
AACACTAGAAGATTTGTCCA+AGG + chr1_1:59335701-59335720 Msa0032310:CDS 35.0%
ACACTAGAAGATTTGTCCAA+GGG + chr1_1:59335702-59335721 Msa0032310:CDS 35.0%
CTTTGTCTGTGAATATGCAT+GGG + chr1_1:59335728-59335747 Msa0032310:CDS 35.0%
TGGAAATGGCAATTCAATCA+AGG + chr1_1:59335956-59335975 Msa0032310:CDS 35.0%
ATGGCAATTCAATCAAGGTT+TGG + chr1_1:59335961-59335980 Msa0032310:CDS 35.0%
CAATTCAATCAAGGTTTGGA+AGG + chr1_1:59335965-59335984 Msa0032310:CDS 35.0%
TAAAGCCCTTGAAGCTATGA+AGG + chr1_1:59327445-59327464 Msa0032310:CDS 40.0%
TACAGCCTTCATAGCTTCAA+GGG - chr1_1:59327453-59327472 None:intergenic 40.0%
TAGGGCATACTTTGAGTCAA+AGG + chr1_1:59327601-59327620 Msa0032310:intron 40.0%
TCTCCATCATGACAACTTAC+TGG - chr1_1:59327878-59327897 None:intergenic 40.0%
CTTGGTAGATATAGACAACC+AGG + chr1_1:59327919-59327938 Msa0032310:CDS 40.0%
! ACCTCCCAAGACTTTTAAAC+AGG + chr1_1:59327994-59328013 Msa0032310:CDS 40.0%
TCCTGTTTAAAAGTCTTGGG+AGG - chr1_1:59327998-59328017 None:intergenic 40.0%
TGAAACCCTCTCAAATTTCC+AGG + chr1_1:59328023-59328042 Msa0032310:CDS 40.0%
TCTTGCCTGGAAATTTGAGA+GGG - chr1_1:59328031-59328050 None:intergenic 40.0%
CAACATGTTGAAACAGATCC+GGG - chr1_1:59328244-59328263 None:intergenic 40.0%
GCAACATGTTGAAACAGATC+CGG - chr1_1:59328245-59328264 None:intergenic 40.0%
ATTTGTCCTGTCTGAATGGT+AGG + chr1_1:59328386-59328405 Msa0032310:intron 40.0%
TAGTATCCTACCATTCAGAC+AGG - chr1_1:59328395-59328414 None:intergenic 40.0%
GAATGGTAGGATACTAGTAG+TGG + chr1_1:59328399-59328418 Msa0032310:intron 40.0%
!! TATTGGTTCTTCTTCACCCT+TGG + chr1_1:59328796-59328815 Msa0032310:CDS 40.0%
! ATTGGTTCTTCTTCACCCTT+GGG + chr1_1:59328797-59328816 Msa0032310:CDS 40.0%
ATTAGACGAAACCAACAGTG+AGG + chr1_1:59328976-59328995 Msa0032310:CDS 40.0%
! GAGTTTGCTTACACTTCACA+AGG + chr1_1:59329160-59329179 Msa0032310:CDS 40.0%
ACCAAACTTGAACCATGCAA+GGG + chr1_1:59329292-59329311 Msa0032310:CDS 40.0%
GGACGTTTATAAATGAGTGC+TGG + chr1_1:59329326-59329345 Msa0032310:CDS 40.0%
!! CGTTTATAAATGAGTGCTGG+AGG + chr1_1:59329329-59329348 Msa0032310:CDS 40.0%
AGGTTTAAGCCGTAAATTGC+AGG + chr1_1:59329396-59329415 Msa0032310:CDS 40.0%
!! CAGGTGTTTTTGACTCAAGA+AGG + chr1_1:59330006-59330025 Msa0032310:intron 40.0%
TTTCTTAAGGGAGGCAGAAA+TGG + chr1_1:59330113-59330132 Msa0032310:intron 40.0%
AGTGTCCTAATGCAGACTAA+TGG + chr1_1:59330178-59330197 Msa0032310:intron 40.0%
TCACTATTAGAAACCGGATG+AGG + chr1_1:59330290-59330309 Msa0032310:intron 40.0%
! GAGTTTGCTTACACTTCACA+AGG + chr1_1:59329160-59329179 Msa0032310:CDS 40.0%
ACATATCCGGGATGAAACTT+AGG - chr1_1:59330831-59330850 None:intergenic 40.0%
CAACTTGTCGAAACATATCC+GGG - chr1_1:59330843-59330862 None:intergenic 40.0%
GCAACTTGTCGAAACATATC+CGG - chr1_1:59330844-59330863 None:intergenic 40.0%
ATTTGTCCTGTCTGAATGGT+AGG + chr1_1:59328386-59328405 Msa0032310:intron 40.0%
TAGTATCCTACCATTCAGAC+AGG - chr1_1:59328395-59328414 None:intergenic 40.0%
GAATGGTAGGATACTAGTAG+TGG + chr1_1:59328399-59328418 Msa0032310:intron 40.0%
!! TATTGGTTCTTCTTCACCCT+TGG + chr1_1:59328796-59328815 Msa0032310:CDS 40.0%
! ATTGGTTCTTCTTCACCCTT+GGG + chr1_1:59328797-59328816 Msa0032310:CDS 40.0%
ATTAGACGAAACCAACAGTG+AGG + chr1_1:59328976-59328995 Msa0032310:CDS 40.0%
TATTTCACTTGCTCGGATTG+CGG + chr1_1:59331640-59331659 Msa0032310:CDS 40.0%
! GAGTTTGCTTACACTTCTCA+AGG + chr1_1:59331743-59331762 Msa0032310:CDS 40.0%
AGGACGTTTATAAAGGAGTG+CGG + chr1_1:59331908-59331927 Msa0032310:intron 40.0%
ATGGACGTCTGACAAATTCA+GGG - chr1_1:59332443-59332462 None:intergenic 40.0%
TTGTCAGACGTCCATCAAAA+AGG + chr1_1:59332448-59332467 Msa0032310:intron 40.0%
ACAAGACAACATAGCATGCA+GGG - chr1_1:59332515-59332534 None:intergenic 40.0%
TACAAGACAACATAGCATGC+AGG - chr1_1:59332516-59332535 None:intergenic 40.0%
GGGTAATGCAAGAGCAAAAT+GGG - chr1_1:59332634-59332653 None:intergenic 40.0%
TGGGTAATGCAAGAGCAAAA+TGG - chr1_1:59332635-59332654 None:intergenic 40.0%
!! AGTTTTAGCGGGAAGAAGAA+GGG - chr1_1:59332700-59332719 None:intergenic 40.0%
!! AAGTTTTAGCGGGAAGAAGA+AGG - chr1_1:59332701-59332720 None:intergenic 40.0%
!! TGATTTTGGAGGGGTGAAAA+TGG - chr1_1:59332727-59332746 None:intergenic 40.0%
!! GGAGATGATGATGATTTTGG+AGG - chr1_1:59332738-59332757 None:intergenic 40.0%
!! GTCGGAGATGATGATGATTT+TGG - chr1_1:59332741-59332760 None:intergenic 40.0%
!! ACAAAGTTAGGAGCATTTCC+AGG - chr1_1:59333035-59333054 None:intergenic 40.0%
ACATTGTCTGGCACAAAGTT+AGG - chr1_1:59333047-59333066 None:intergenic 40.0%
TTTCCAGACACAACATTGTC+TGG - chr1_1:59333059-59333078 None:intergenic 40.0%
TCTGGAAATACAGAAACTGC+AGG + chr1_1:59333071-59333090 Msa0032310:intron 40.0%
GGAAATGTTGTTGCAAATGC+TGG + chr1_1:59333092-59333111 Msa0032310:intron 40.0%
CTGAAAGAATTGGTCCTCTA+AGG - chr1_1:59333260-59333279 None:intergenic 40.0%
GACCAATTCTTTCAGCTGAT+AGG + chr1_1:59333265-59333284 Msa0032310:intron 40.0%
AACTCCTGCTGGCATAATTA+GGG + chr1_1:59333329-59333348 Msa0032310:intron 40.0%
AGGGTTCCATATCCAACTTA+TGG + chr1_1:59333348-59333367 Msa0032310:intron 40.0%
! GATGGACCATAAGTTGGATA+TGG - chr1_1:59333357-59333376 None:intergenic 40.0%
TATCCAACTTATGGTCCATC+TGG + chr1_1:59333357-59333376 Msa0032310:intron 40.0%
ATGGAGTTTATACCAACTCC+CGG + chr1_1:59333402-59333421 Msa0032310:intron 40.0%
! CATCACTTCTTTGGAAATCC+GGG - chr1_1:59333423-59333442 None:intergenic 40.0%
! GCATCACTTCTTTGGAAATC+CGG - chr1_1:59333424-59333443 None:intergenic 40.0%
TCCAAAGAAGTGATGCTTCA+TGG + chr1_1:59333428-59333447 Msa0032310:intron 40.0%
! TCCATGAAGCATCACTTCTT+TGG - chr1_1:59333432-59333451 None:intergenic 40.0%
! ACTTGTTAATGCCCCATAGT+TGG + chr1_1:59333549-59333568 Msa0032310:intron 40.0%
CTTGTTAATGCCCCATAGTT+GGG + chr1_1:59333550-59333569 Msa0032310:intron 40.0%
TTAAACCAACCTTTGGCAGA+GGG + chr1_1:59333866-59333885 Msa0032310:intron 40.0%
CAAGCATAGAATGGTCTTCT+TGG + chr1_1:59333889-59333908 Msa0032310:intron 40.0%
CTGTCAATTTGAGTCCTGAA+AGG + chr1_1:59334030-59334049 Msa0032310:intron 40.0%
ATTTGTCCTGTCTGAATGGT+AGG + chr1_1:59328386-59328405 Msa0032310:intron 40.0%
TAGTATCCTACCATTCAGAC+AGG - chr1_1:59328395-59328414 None:intergenic 40.0%
GAATGGTAGGATACTAGTAG+TGG + chr1_1:59328399-59328418 Msa0032310:intron 40.0%
!! TATTGGTTCTTCTTCACCCT+TGG + chr1_1:59328796-59328815 Msa0032310:CDS 40.0%
! ATTGGTTCTTCTTCACCCTT+GGG + chr1_1:59328797-59328816 Msa0032310:CDS 40.0%
ATTAGACGAAACCAACAGTG+AGG + chr1_1:59328976-59328995 Msa0032310:CDS 40.0%
TATTTCACTTGCTCGGATTG+CGG + chr1_1:59331640-59331659 Msa0032310:CDS 40.0%
! GAGTTTGCTTACACTTCACA+AGG + chr1_1:59329160-59329179 Msa0032310:CDS 40.0%
!! TGTAAAGAGTGCCTAATTGC+AGG + chr1_1:59334941-59334960 Msa0032310:intron 40.0%
!! CAGGTGTTTTTGACTCAAGA+AGG + chr1_1:59330006-59330025 Msa0032310:intron 40.0%
CCATGCATATTCACAGACAA+AGG - chr1_1:59335730-59335749 None:intergenic 40.0%
CCTTTGTCTGTGAATATGCA+TGG + chr1_1:59335727-59335746 Msa0032310:CDS 40.0%
TGTAACACTTGATGCAGACT+GGG + chr1_1:59335821-59335840 Msa0032310:CDS 40.0%
TAATAAATTGGGGCTAAGCC+AGG + chr1_1:59335869-59335888 Msa0032310:CDS 40.0%
AAAGGCTGGAAGATTGGAAA+TGG + chr1_1:59335942-59335961 Msa0032310:CDS 40.0%
CTACAGCCTTCATAGCTTCA+AGG - chr1_1:59327454-59327473 None:intergenic 45.0%
CTTGAAGCTATGAAGGCTGT+AGG + chr1_1:59327452-59327471 Msa0032310:CDS 45.0%
GCTCCAGTAAGTTGTCATGA+TGG + chr1_1:59327872-59327891 Msa0032310:CDS 45.0%
GTGTTGTCTGTAGAAGACAC+TGG + chr1_1:59327968-59327987 Msa0032310:CDS 45.0%
GTCTTGCCTGGAAATTTGAG+AGG - chr1_1:59328032-59328051 None:intergenic 45.0%
AACCAATTCGCAGGCATTCA+TGG + chr1_1:59328063-59328082 Msa0032310:CDS 45.0%
CTCTGAATAGAAGGATGGCT+AGG - chr1_1:59328160-59328179 None:intergenic 45.0%
CTAGCCATCCTTCTATTCAG+AGG + chr1_1:59328158-59328177 Msa0032310:intron 45.0%
ACAGATCCGGGATGAAACTT+AGG - chr1_1:59328232-59328251 None:intergenic 45.0%
AGAAAAACGGGAGACCTTTC+AGG - chr1_1:59328363-59328382 None:intergenic 45.0%
GTGGAGATCCTGAAATCAGT+TGG + chr1_1:59328418-59328437 Msa0032310:intron 45.0%
GGCTCACTAAAAGCTTCCAA+TGG + chr1_1:59328668-59328687 Msa0032310:intron 45.0%
TGTGATGCTGCATTAAGGAC+TGG + chr1_1:59328842-59328861 Msa0032310:CDS 45.0%
GTCAAGGCAAACTCTTTCTG+AGG + chr1_1:59328886-59328905 Msa0032310:CDS 45.0%
GATTGCTGCTCTGATTGTTC+AGG + chr1_1:59329085-59329104 Msa0032310:CDS 45.0%
! GTTTCTTGAGAGCATGCACA+AGG - chr1_1:59329133-59329152 None:intergenic 45.0%
TGTGCATGCTCTCAAGAAAC+TGG + chr1_1:59329133-59329152 Msa0032310:CDS 45.0%
GACCAAACTTGAACCATGCA+AGG + chr1_1:59329291-59329310 Msa0032310:CDS 45.0%
! TCCCTTGCATGGTTCAAGTT+TGG - chr1_1:59329296-59329315 None:intergenic 45.0%
!! AATGAGTGCTGGAGGAAATG+TGG + chr1_1:59329337-59329356 Msa0032310:CDS 45.0%
ACAATGTGGCAATTGCAGCA+AGG - chr1_1:59329882-59329901 None:intergenic 45.0%
GCACGCACAAGAAAATGACA+AGG - chr1_1:59330349-59330368 None:intergenic 45.0%
!! GTAAAGAGTGCCCAATTGAG+AGG + chr1_1:59330484-59330503 Msa0032310:intron 45.0%
ACCAAACCTGAACCATGCAA+GGG + chr1_1:59330519-59330538 Msa0032310:intron 45.0%
!! AAGGAGTGCTGAAGGAAATC+TGG + chr1_1:59330564-59330583 Msa0032310:intron 45.0%
GTGACATGCAGTGTGGAAAT+CGG + chr1_1:59330589-59330608 Msa0032310:intron 45.0%
TGACATGCAGTGTGGAAATC+GGG + chr1_1:59330590-59330609 Msa0032310:intron 45.0%
AGGCTTAAGCCGTAAATTGC+AGG + chr1_1:59330623-59330642 Msa0032310:intron 45.0%
AGAAAAACGGGAGACCTTTC+AGG - chr1_1:59328363-59328382 None:intergenic 45.0%
GGCTCACTAATAGCTTCCAA+TGG + chr1_1:59331251-59331270 Msa0032310:intron 45.0%
TGTGATGCTGCATTAAGGAC+TGG + chr1_1:59328842-59328861 Msa0032310:CDS 45.0%
GTCAAGGCAAACTCTTTCTG+AGG + chr1_1:59328886-59328905 Msa0032310:CDS 45.0%
AAGACAGTCGCCTGAACAAT+CGG - chr1_1:59329098-59329117 None:intergenic 45.0%
! GTTTCTTGAGAGCATGCAGA+AGG - chr1_1:59331716-59331735 None:intergenic 45.0%
TCTGCATGCTCTCAAGAAAC+TGG + chr1_1:59331716-59331735 Msa0032310:CDS 45.0%
!! GTAAAGAGTGCCCAATTGAG+AGG + chr1_1:59330484-59330503 Msa0032310:intron 45.0%
ACCAAACCTGAACCATGCAA+GGG + chr1_1:59330519-59330538 Msa0032310:intron 45.0%
! GGACGTTTATAAAGGAGTGC+GGG + chr1_1:59331909-59331928 Msa0032310:intron 45.0%
! GTCCCTGAATTTTCATGCGT+CGG + chr1_1:59332378-59332397 Msa0032310:intron 45.0%
GATGGACGTCTGACAAATTC+AGG - chr1_1:59332444-59332463 None:intergenic 45.0%
CAAATTAGTCCCTGAACACG+TGG - chr1_1:59332557-59332576 None:intergenic 45.0%
!! TTTTGGAGGGGTGAAAATGG+AGG - chr1_1:59332724-59332743 None:intergenic 45.0%
!! AATTTCAGGTTTCTGCACCC+AGG + chr1_1:59333226-59333245 Msa0032310:intron 45.0%
GGCCTATCAGCTGAAAGAAT+TGG - chr1_1:59333270-59333289 None:intergenic 45.0%
GCCTAAGCAAACACCAATGA+GGG + chr1_1:59333287-59333306 Msa0032310:intron 45.0%
CCTAAGCAAACACCAATGAG+GGG + chr1_1:59333288-59333307 Msa0032310:intron 45.0%
CTAATTATGCCAGCAGGAGT+TGG - chr1_1:59333330-59333349 None:intergenic 45.0%
CAACTCCTGCTGGCATAATT+AGG + chr1_1:59333328-59333347 Msa0032310:intron 45.0%
GAACCAGATGGACCATAAGT+TGG - chr1_1:59333363-59333382 None:intergenic 45.0%
! TTCTTTGGAAATCCGGGAGT+TGG - chr1_1:59333417-59333436 None:intergenic 45.0%
GCAAAAGCAACCCAACTATG+GGG - chr1_1:59333563-59333582 None:intergenic 45.0%
GGCAAAAGCAACCCAACTAT+GGG - chr1_1:59333564-59333583 None:intergenic 45.0%
AGGCAAAAGCAACCCAACTA+TGG - chr1_1:59333565-59333584 None:intergenic 45.0%
GTTAAACCAACCTTTGGCAG+AGG + chr1_1:59333865-59333884 Msa0032310:intron 45.0%
TGTGATGCTGCATTAAGGAC+TGG + chr1_1:59328842-59328861 Msa0032310:CDS 45.0%
GTCAAGGCAAACTCTTTCTG+AGG + chr1_1:59328886-59328905 Msa0032310:CDS 45.0%
AAGACAGTCGCCTGAACAAT+CGG - chr1_1:59329098-59329117 None:intergenic 45.0%
ACTCTCCACCAGTTTCTTGA+GGG - chr1_1:59329144-59329163 None:intergenic 45.0%
AACTCTCCACCAGTTTCTTG+AGG - chr1_1:59329145-59329164 None:intergenic 45.0%
ACAATGTGGCAATTGCAGCA+AGG - chr1_1:59329882-59329901 None:intergenic 45.0%
TTCACAGACAAAGGATCCCT+TGG - chr1_1:59335721-59335740 None:intergenic 45.0%
GACAGGATTGTGCATAGTAC+CGG + chr1_1:59335777-59335796 Msa0032310:CDS 45.0%
CAGTCTGCATCAAGTGTTAC+AGG - chr1_1:59335822-59335841 None:intergenic 45.0%
CTGTAACACTTGATGCAGAC+TGG + chr1_1:59335820-59335839 Msa0032310:CDS 45.0%
GTAACACTTGATGCAGACTG+GGG + chr1_1:59335822-59335841 Msa0032310:CDS 45.0%
!! ATTAATGATAATTAATAAAT+TGG + chr1_1:59335857-59335876 Msa0032310:CDS 5.0%
!! TTAATGATAATTAATAAATT+GGG + chr1_1:59335858-59335877 Msa0032310:CDS 5.0%
GAAGGCTGTAGGAATCTCAG+AGG + chr1_1:59327463-59327482 Msa0032310:CDS 50.0%
TGTAGGAATCTCAGAGGTCG+AGG + chr1_1:59327469-59327488 Msa0032310:CDS 50.0%
!! GACAACCAGGTTTTGTCAGC+TGG + chr1_1:59327932-59327951 Msa0032310:CDS 50.0%
AGTTGCCAGCTGACAAAACC+TGG - chr1_1:59327940-59327959 None:intergenic 50.0%
TGTGAGCTTCATGTCTTGCC+TGG - chr1_1:59328044-59328063 None:intergenic 50.0%
GAAGCTCACAACCAATTCGC+AGG + chr1_1:59328054-59328073 Msa0032310:CDS 50.0%
AGCCATGAATGCCTGCGAAT+TGG - chr1_1:59328068-59328087 None:intergenic 50.0%
GGATGGCTAGGTCCATCAAT+TGG - chr1_1:59328148-59328167 None:intergenic 50.0%
ACTTGCTCGGATTACGGATG+AGG + chr1_1:59329063-59329082 Msa0032310:CDS 50.0%
GCATGCACAAGGAACTGACA+AGG - chr1_1:59329122-59329141 None:intergenic 50.0%
GCATGCTCTCAAGAAACTGG+TGG + chr1_1:59329136-59329155 Msa0032310:CDS 50.0%
! GTAAAGAGTGCGCAGTTGAG+AGG + chr1_1:59329257-59329276 Msa0032310:intron 50.0%
TGAACCATGCAAGGGACATC+TGG + chr1_1:59329300-59329319 Msa0032310:CDS 50.0%
CTAACCAGATGTCCCTTGCA+TGG - chr1_1:59329307-59329326 None:intergenic 50.0%
CATGCAAGGGACATCTGGTT+AGG + chr1_1:59329305-59329324 Msa0032310:CDS 50.0%
TGTGGATGTGACATGCAGTG+TGG + chr1_1:59329355-59329374 Msa0032310:CDS 50.0%
GTGACATGCAGTGTGGAACT+CGG + chr1_1:59329362-59329381 Msa0032310:CDS 50.0%
TGACATGCAGTGTGGAACTC+GGG + chr1_1:59329363-59329382 Msa0032310:CDS 50.0%
TGACTCAAGAAGGAAAGGGC+TGG + chr1_1:59330016-59330035 Msa0032310:intron 50.0%
GATTGCAGCTCCGATTGTTC+TGG + chr1_1:59330312-59330331 Msa0032310:CDS 50.0%
CAGACAGTCGCCAGAACAAT+CGG - chr1_1:59330325-59330344 None:intergenic 50.0%
TGTGCGTGCTCTCAAGAAAC+TGG + chr1_1:59330360-59330379 Msa0032310:CDS 50.0%
GACCAAACCTGAACCATGCA+AGG + chr1_1:59330518-59330537 Msa0032310:intron 50.0%
! TCCCTTGCATGGTTCAGGTT+TGG - chr1_1:59330523-59330542 None:intergenic 50.0%
AGATGTCCCTTGCATGGTTC+AGG - chr1_1:59329301-59329320 None:intergenic 50.0%
TGAACCATGCAAGGGACATC+TGG + chr1_1:59329300-59329319 Msa0032310:CDS 50.0%
CTAACCAGATGTCCCTTGCA+TGG - chr1_1:59329307-59329326 None:intergenic 50.0%
CATGCAAGGGACATCTGGTT+AGG + chr1_1:59329305-59329324 Msa0032310:CDS 50.0%
TCTGGATGTGACATGCAGTG+TGG + chr1_1:59330582-59330601 Msa0032310:intron 50.0%
GATTGCTGCTCCGATTGTTC+AGG + chr1_1:59331668-59331687 Msa0032310:CDS 50.0%
GCATGCAGAAGGAACTGACA+AGG - chr1_1:59331705-59331724 None:intergenic 50.0%
GCATGCTCTCAAGAAACTGG+TGG + chr1_1:59329136-59329155 Msa0032310:CDS 50.0%
CACCAAACCTGAACCATGCA+AGG + chr1_1:59331874-59331893 Msa0032310:intron 50.0%
! TCCCTTGCATGGTTCAGGTT+TGG - chr1_1:59330523-59330542 None:intergenic 50.0%
AGATGTCCCTTGCATGGTTC+AGG - chr1_1:59329301-59329320 None:intergenic 50.0%
TGAACCATGCAAGGGACATC+TGG + chr1_1:59329300-59329319 Msa0032310:CDS 50.0%
CTAACCAGATGTCCCTTGCA+TGG - chr1_1:59329307-59329326 None:intergenic 50.0%
CATGCAAGGGACATCTGGTT+AGG + chr1_1:59329305-59329324 Msa0032310:CDS 50.0%
! CGTTTATAAAGGAGTGCGGG+AGG + chr1_1:59331912-59331931 Msa0032310:intron 50.0%
! AAGGAGTGCGGGAGGAAATT+TGG + chr1_1:59331920-59331939 Msa0032310:intron 50.0%
TTTGGATGTGACATGCAGCG+TGG + chr1_1:59331938-59331957 Msa0032310:intron 50.0%
GGCCGACGCATGAAAATTCA+GGG - chr1_1:59332383-59332402 None:intergenic 50.0%
TGGCCGACGCATGAAAATTC+AGG - chr1_1:59332384-59332403 None:intergenic 50.0%
GCATAATTGAGGGACGGAGT+TGG - chr1_1:59332404-59332423 None:intergenic 50.0%
! TAACAGAGCACTTGGACGGA+GGG - chr1_1:59332475-59332494 None:intergenic 50.0%
! TGGCTAACAGAGCACTTGGA+CGG - chr1_1:59332479-59332498 None:intergenic 50.0%
! AGCATGGCTAACAGAGCACT+TGG - chr1_1:59332483-59332502 None:intergenic 50.0%
GCTATGTTGTCTTGTACGCG+TGG + chr1_1:59332520-59332539 Msa0032310:intron 50.0%
AAGAAGGAAGCCACGTGTTC+AGG + chr1_1:59332544-59332563 Msa0032310:intron 50.0%
AGAAGGAAGCCACGTGTTCA+GGG + chr1_1:59332545-59332564 Msa0032310:intron 50.0%
GTGTTCGCGGCTGTGATTAA+AGG + chr1_1:59332785-59332804 Msa0032310:intron 50.0%
GTGCCAGACAATGTTGTGTC+TGG + chr1_1:59333053-59333072 Msa0032310:intron 50.0%
GGCCTAAGCAAACACCAATG+AGG + chr1_1:59333286-59333305 Msa0032310:intron 50.0%
! CCCCTCATTGGTGTTTGCTT+AGG - chr1_1:59333291-59333310 None:intergenic 50.0%
GGAACCCTAATTATGCCAGC+AGG - chr1_1:59333336-59333355 None:intergenic 50.0%
! GTAGGTTGAGTCGAACCAGA+TGG - chr1_1:59333375-59333394 None:intergenic 50.0%
AGGTAAACGGGAGACCTTTC+AGG - chr1_1:59334047-59334066 None:intergenic 50.0%
GGCTCACCAAAAGCTTCCAA+TGG + chr1_1:59334353-59334372 Msa0032310:intron 50.0%
GATTGCTGCTCCGATTGTTC+AGG + chr1_1:59331668-59331687 Msa0032310:CDS 50.0%
GCATGCACAAGGAACTGTCA+AGG - chr1_1:59334807-59334826 None:intergenic 50.0%
! GTTTCTTGAGGGCATGCACA+AGG - chr1_1:59334818-59334837 None:intergenic 50.0%
TGTGCATGCCCTCAAGAAAC+TGG + chr1_1:59334818-59334837 Msa0032310:CDS 50.0%
! GGGGGGTCACTACATTCTTT+TGG + chr1_1:59335453-59335472 Msa0032310:intron 50.0%
TGACTCAAGAAGGAAAGGGC+TGG + chr1_1:59330016-59330035 Msa0032310:intron 50.0%
GACTCAAGAAGGAAAGGGCT+GGG + chr1_1:59330017-59330036 Msa0032310:intron 50.0%
ACTCAAGAAGGAAAGGGCTG+GGG + chr1_1:59330018-59330037 Msa0032310:intron 50.0%
ATGCTTCTCCATGTGAAGCC+TGG - chr1_1:59335890-59335909 None:intergenic 50.0%
TCGGAGCTGCAATCCTCATC+CGG - chr1_1:59330306-59330325 None:intergenic 55.0%
GCGTGCTCTCAAGAAACTGG+AGG + chr1_1:59330363-59330382 Msa0032310:CDS 55.0%
GGAAATCGGGTAGTGCAACG+AGG + chr1_1:59330603-59330622 Msa0032310:intron 55.0%
ACTTGCTCGGATTGCGGATG+AGG + chr1_1:59331646-59331665 Msa0032310:CDS 55.0%
GTGACATGCAGCGTGGAACT+CGG + chr1_1:59331945-59331964 Msa0032310:intron 55.0%
TGACATGCAGCGTGGAACTC+GGG + chr1_1:59331946-59331965 Msa0032310:intron 55.0%
! GGACGGAGGGACCTTTTTGA+TGG - chr1_1:59332462-59332481 None:intergenic 55.0%
! CTAACAGAGCACTTGGACGG+AGG - chr1_1:59332476-59332495 None:intergenic 55.0%
GTCTTGTACGCGTGGCAAGA+AGG + chr1_1:59332528-59332547 Msa0032310:intron 55.0%
AGCGGGAAGAAGAAGGGTCA+AGG - chr1_1:59332694-59332713 None:intergenic 55.0%
! TTCAGGTTTCTGCACCCAGG+AGG + chr1_1:59333229-59333248 Msa0032310:intron 55.0%
GTTTCTGCACCCAGGAGGTA+TGG + chr1_1:59333234-59333253 Msa0032310:intron 55.0%
!! CCTCTAAGGCCATACCTCCT+GGG - chr1_1:59333246-59333265 None:intergenic 55.0%
!! TCCTCTAAGGCCATACCTCC+TGG - chr1_1:59333247-59333266 None:intergenic 55.0%
CTATGCTTGCCCTCTGCCAA+AGG - chr1_1:59333878-59333897 None:intergenic 55.0%
GGCAGAGGGCAAGCATAGAA+TGG + chr1_1:59333880-59333899 Msa0032310:intron 55.0%
ACTTGCTCGGATTGCGGATG+AGG + chr1_1:59331646-59331665 Msa0032310:CDS 55.0%
GCATGCCCTCAAGAAACTGG+TGG + chr1_1:59334821-59334840 Msa0032310:CDS 55.0%
CTCAGAGGTCGAGGTGAGAC+CGG + chr1_1:59327478-59327497 Msa0032310:intron 60.0%
CCTTCAGATGATGCTGCCCC+AGG - chr1_1:59328112-59328131 None:intergenic 60.0%
CCTGGGGCAGCATCATCTGA+AGG + chr1_1:59328109-59328128 Msa0032310:CDS 60.0%
GGAACTCGGGTAGTGCAACG+AGG + chr1_1:59329376-59329395 Msa0032310:CDS 60.0%
TGCAGGGCGACAGATCAGCA+TGG - chr1_1:59332499-59332518 None:intergenic 60.0%
! CCCAGGAGGTATGGCCTTAG+AGG + chr1_1:59333243-59333262 Msa0032310:intron 60.0%
GCTGGTGCATGACCCCTCAT+TGG - chr1_1:59333303-59333322 None:intergenic 60.0%
CCAGCAGGAGTTGGATGAGC+TGG - chr1_1:59333321-59333340 None:intergenic 60.0%
CCAGCTCATCCAACTCCTGC+TGG + chr1_1:59333318-59333337 Msa0032310:intron 60.0%
GCTTGCCCTCTGCCAAAGGT+TGG - chr1_1:59333874-59333893 None:intergenic 60.0%
TGCAGACTGGGGCTCGAAAG+TGG + chr1_1:59335833-59335852 Msa0032310:CDS 60.0%
GCAGACTGGGGCTCGAAAGT+GGG + chr1_1:59335834-59335853 Msa0032310:CDS 60.0%
GGGCTAAGCCAGGCTTCACA+TGG + chr1_1:59335879-59335898 Msa0032310:CDS 60.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 59327440 59335995 59327440 ID=Msa0032310;Name=Msa0032310
chr1_1 mRNA 59327440 59335995 59327440 ID=Msa0032310-mRNA-1;Parent=Msa0032310;Name=Msa0032310-mRNA-1;_AED=0.18;_eAED=0.21;_QI=0|0|0|1|0.85|0.75|8|0|832
chr1_1 exon 59327440 59327490 59327440 ID=Msa0032310-mRNA-1:exon:18275;Parent=Msa0032310-mRNA-1
chr1_1 exon 59327851 59328130 59327851 ID=Msa0032310-mRNA-1:exon:18276;Parent=Msa0032310-mRNA-1
chr1_1 exon 59328669 59329181 59328669 ID=Msa0032310-mRNA-1:exon:18277;Parent=Msa0032310-mRNA-1
chr1_1 exon 59329272 59329417 59329272 ID=Msa0032310-mRNA-1:exon:18278;Parent=Msa0032310-mRNA-1
chr1_1 exon 59330300 59330408 59330300 ID=Msa0032310-mRNA-1:exon:18279;Parent=Msa0032310-mRNA-1
chr1_1 exon 59331252 59331764 59331252 ID=Msa0032310-mRNA-1:exon:18280;Parent=Msa0032310-mRNA-1
chr1_1 exon 59334354 59334907 59334354 ID=Msa0032310-mRNA-1:exon:18281;Parent=Msa0032310-mRNA-1
chr1_1 exon 59335663 59335995 59335663 ID=Msa0032310-mRNA-1:exon:18282;Parent=Msa0032310-mRNA-1
chr1_1 CDS 59327440 59327490 59327440 ID=Msa0032310-mRNA-1:cds;Parent=Msa0032310-mRNA-1
chr1_1 CDS 59327851 59328130 59327851 ID=Msa0032310-mRNA-1:cds;Parent=Msa0032310-mRNA-1
chr1_1 CDS 59328669 59329181 59328669 ID=Msa0032310-mRNA-1:cds;Parent=Msa0032310-mRNA-1
chr1_1 CDS 59329272 59329417 59329272 ID=Msa0032310-mRNA-1:cds;Parent=Msa0032310-mRNA-1
chr1_1 CDS 59330300 59330408 59330300 ID=Msa0032310-mRNA-1:cds;Parent=Msa0032310-mRNA-1
chr1_1 CDS 59331252 59331764 59331252 ID=Msa0032310-mRNA-1:cds;Parent=Msa0032310-mRNA-1
chr1_1 CDS 59334354 59334907 59334354 ID=Msa0032310-mRNA-1:cds;Parent=Msa0032310-mRNA-1
chr1_1 CDS 59335663 59335995 59335663 ID=Msa0032310-mRNA-1:cds;Parent=Msa0032310-mRNA-1
Gene Sequence

>Msa0032310

GCAATTAAAGCCCTTGAAGCTATGAAGGCTGTAGGAATCTCAGAGGTCGAGCAAGAAGAACATAAGAGAAAAGCTCCAGTAAGTTGTCATGATGGAGAGAAACCTAAACAGAAACTTCACTTGGTAGATATAGACAACCAGGTTTTGTCAGCTGGCAACTCAAGACAAGTGTTGTCTGTAGAAGACACTGGCATACCTCCCAAGACTTTTAAACAGGAAACTATGAAACCCTCTCAAATTTCCAGGCAAGACATGAAGCTCACAACCAATTCGCAGGCATTCATGGCTGCTAGAGATAGAAAGATTTATCCTGGGGCAGCATCATCTGAAGGCTCACTAAAAGCTTCCAATGGAAATCTTACTGTCAAATCCCTGTCAGATGTGTATCAGAATACACACAAGATAGAAGCTACTCCCACATGCAATAATAACACCAGAACCAGTAAGGGTAATATTGATATTGGTTCTTCTTCACCCTTGGGAGAAGTTAAATCTTCTTTAAATTGTGATGCTGCATTAAGGACTGGCTTGAATTTTAATCGAAATGGGTCAAGGCAAACTCTTTCTGAGGATAAAAAGAAATCCTTTCGATATGTCGAAGACATAACAAAAGGTTCTGAAAACATTAAAATATCATTATTAGACGAAACCAACAGTGAGGATTTTCCAAAATTTAATTACATTCCATGTAACACAATGTATCAAAGTGCAAATGTTAATATTTCACTTGCTCGGATTACGGATGAGGATTGCTGCTCTGATTGTTCAGGCGACTGTCTTTCCTTGTCAGTTCCTTGTGCATGCTCTCAAGAAACTGGTGGAGAGTTTGCTTACACTTCACAAGTTGAGAGGACTAAGAATGAGACCAAACTTGAACCATGCAAGGGACATCTGGTTAGGACGTTTATAAATGAGTGCTGGAGGAAATGTGGATGTGACATGCAGTGTGGAACTCGGGTAGTGCAACGAGGTTTAAGCCGTAAATTGCAGAAACCGGATGAGGATTGCAGCTCCGATTGTTCTGGCGACTGTCTGTCCTTGTCATTTTCTTGTGCGTGCTCTCAAGAAACTGGAGGAGAGTTTGCTTACACTTCACAAGGCTCACTAATAGCTTCCAATGGAAATCTTACTGTCAAATCCCTGTCAGATGTGTATCAGAATACACACAAGATAGAAGCTACTCCCACATGCAATAATAACACCAGAACCAGTAAGGGTAATATTGATATTGGTTCTTCTTCACCCTTGGGAGAAGTTAAATCTTCTTTAAATTGTGATGCTGCATTAAGGACTGGCTTGAATTTAAATCGAAATGGGTCAAGGCAAACTCTTTCTGAGGATAAAAAGAAATCCTTTCGATATGTCGAAGACATAACAAAAGGTTCTGAAAACATTAAAATATCATTATTAGACGAAACCAACAGTGAGGATTTTCCAAAATTTAATTACATTCCATGTAACACAATGTATCAAAGTGCAAATGTTAATATTTCACTTGCTCGGATTGCGGATGAGGATTGCTGCTCCGATTGTTCAGGCGACTGTCTTTCCTTGTCAGTTCCTTCTGCATGCTCTCAAGAAACTGGTGGAGAGTTTGCTTACACTTCTCAAGGCTCACCAAAAGCTTCCAATGGAAATCTTACTGTCAAATCCCTGTCAGATGTGTATCAGAATAGACACAAGATAGAAGCTACTCCCACATGCAATAATAACACCAGAACCAGTAAGGGTAATATTGATATTGGTTCTTCTTCACCCTTGGGAGAAGTTAAATCTTCTTTAAATTGTGATGCTGCATTAAGGACTGGCTTGAATTTAAATCGAAATGGGTCAAGGCAAACTCTTTCTGAGGATAAAAAGAAATCCTTTCGATATGTCGAAGACATAACAAAAGGTTCTGAAAACATTAAAATATCATTATTAGACGAAACCAACAGTGAGGATTTTCCAAAATTTAATTACATTCCATGTAACACAATGTATCAAAGTGCAAATGTTAATATTTCACTTGCTCGGATTGCGGATGAGGATTGCTGCTCCGATTGTTCAGGCGACTGTCTTTCCTTGACAGTTCCTTGTGCATGCCCTCAAGAAACTGGTGGAGAGTTTGCTTACACTTCACAAGGTTTGTTGAGTGAAAAGTTTTTAACAGATTGCATGTCTATGGTGTTTTTGACTCAAGAAGGAAAGGGCTGGGGCGTTATAACACTAGAAGATTTGTCCAAGGGATCCTTTGTCTGTGAATATGCATGGGAGATTTTAACCAATTCAGAATTATATGACAGGATTGTGCATAGTACCGGCAATGATAGACATACATATCCTGTAACACTTGATGCAGACTGGGGCTCGAAAGTGGGATTAATGATAATTAATAAATTGGGGCTAAGCCAGGCTTCACATGGAGAAGCATACATCAATCTATATGTATCAATGATAATTAATAAAGGCTGGAAGATTGGAAATGGCAATTCAATCAAGGTTTGGAAGGATAATTGA
Protein sequence

>Msa0032310

AIKALEAMKAVGISEVEQEEHKRKAPVSCHDGEKPKQKLHLVDIDNQVLSAGNSRQVLSVEDTGIPPKTFKQETMKPSQISRQDMKLTTNSQAFMAARDRKIYPGAASSEGSLKASNGNLTVKSLSDVYQNTHKIEATPTCNNNTRTSKGNIDIGSSSPLGEVKSSLNCDAALRTGLNFNRNGSRQTLSEDKKKSFRYVEDITKGSENIKISLLDETNSEDFPKFNYIPCNTMYQSANVNISLARITDEDCCSDCSGDCLSLSVPCACSQETGGEFAYTSQVERTKNETKLEPCKGHLVRTFINECWRKCGCDMQCGTRVVQRGLSRKLQKPDEDCSSDCSGDCLSLSFSCACSQETGGEFAYTSQGSLIASNGNLTVKSLSDVYQNTHKIEATPTCNNNTRTSKGNIDIGSSSPLGEVKSSLNCDAALRTGLNLNRNGSRQTLSEDKKKSFRYVEDITKGSENIKISLLDETNSEDFPKFNYIPCNTMYQSANVNISLARIADEDCCSDCSGDCLSLSVPSACSQETGGEFAYTSQGSPKASNGNLTVKSLSDVYQNRHKIEATPTCNNNTRTSKGNIDIGSSSPLGEVKSSLNCDAALRTGLNLNRNGSRQTLSEDKKKSFRYVEDITKGSENIKISLLDETNSEDFPKFNYIPCNTMYQSANVNISLARIADEDCCSDCSGDCLSLTVPCACPQETGGEFAYTSQGLLSEKFLTDCMSMVFLTQEGKGWGVITLEDLSKGSFVCEYAWEILTNSELYDRIVHSTGNDRHTYPVTLDADWGSKVGLMIINKLGLSQASHGEAYINLYVSMIINKGWKIGNGNSIKVWKDN*