AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0034190

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0034190 MtrunA17_Chr1g0194741 96.440 646 20 2 1 643 7 652 0.0 1272
Msa0034190 MtrunA17_Chr1g0197591 61.706 1102 348 20 4 1090 3 1045 0.0 1223
Msa0034190 MtrunA17_Chr1g0194731 95.415 458 19 2 643 1099 1 457 0.0 833
Msa0034190 MtrunA17_Chr8g0371601 28.772 570 352 17 123 668 196 735 4.71e-43 171
Msa0034190 MtrunA17_Chr8g0371601 31.658 199 111 7 906 1081 957 1153 1.27e-16 85.5
Msa0034190 MtrunA17_Chr5g0405701 28.086 559 330 16 146 668 251 773 5.52e-42 167
Msa0034190 MtrunA17_Chr5g0405701 34.483 145 71 4 960 1081 1040 1183 3.36e-16 84.3
Msa0034190 MtrunA17_Chr8g0343551 73.239 71 19 0 1020 1090 12 82 1.71e-31 118
Msa0034190 MtrunA17_Chr8g0377481 31.429 315 177 10 377 673 381 674 3.27e-31 132
Msa0034190 MtrunA17_Chr8g0377481 32.609 138 69 6 967 1091 838 964 1.46e-13 75.5
Msa0034190 MtrunA17_Chr3g0122391 28.188 447 253 18 266 672 305 723 3.45e-29 126
Msa0034190 MtrunA17_Chr3g0122391 32.716 162 83 8 942 1091 874 1021 3.31e-14 77.8
Msa0034190 MtrunA17_Chr5g0447641 26.158 367 215 12 336 679 575 908 1.28e-23 108
Msa0034190 MtrunA17_Chr5g0447641 33.333 150 62 7 970 1093 1074 1211 1.83e-12 72.0
Msa0034190 MtrunA17_Chr8g0392301 26.075 372 221 9 345 678 340 695 5.01e-22 103
Msa0034190 MtrunA17_Chr8g0392301 32.727 165 86 5 944 1091 835 991 6.66e-15 80.1
Msa0034190 MtrunA17_Chr3g0136601 29.464 336 180 14 361 663 335 646 4.03e-20 96.7
Msa0034190 MtrunA17_Chr4g0013831 27.841 352 190 12 372 702 324 632 2.30e-18 90.9
Msa0034190 MtrunA17_Chr1g0150511 26.027 365 203 12 393 707 381 728 7.26e-18 89.7
Msa0034190 MtrunA17_Chr7g0269631 29.130 230 127 7 448 672 393 591 6.03e-16 82.8
Msa0034190 MtrunA17_Chr8g0364781 36.496 137 61 6 973 1096 15 138 5.04e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0034190 AT2G47430.1 37.892 1148 616 25 5 1095 12 1119 0.0 673
Msa0034190 AT2G17820.1 33.159 383 232 10 290 668 400 762 9.50e-44 174
Msa0034190 AT2G17820.1 31.658 199 97 7 921 1090 1004 1192 3.05e-16 84.7
Msa0034190 AT1G27320.1 27.475 404 225 12 374 763 436 785 2.24e-30 130
Msa0034190 AT1G27320.1 29.221 154 75 5 967 1096 887 1030 1.14e-11 69.7
Msa0034190 AT2G01830.2 27.596 366 221 11 332 671 415 762 4.35e-28 123
Msa0034190 AT2G01830.2 37.037 135 67 4 967 1091 942 1068 7.25e-16 83.6
Msa0034190 AT2G01830.1 27.596 366 221 11 332 671 392 739 4.44e-28 123
Msa0034190 AT2G01830.1 37.037 135 67 4 967 1091 919 1045 7.36e-16 83.6
Msa0034190 AT2G01830.4 27.596 366 221 11 332 671 392 739 4.44e-28 123
Msa0034190 AT2G01830.4 37.037 135 67 4 967 1091 919 1045 7.36e-16 83.6
Msa0034190 AT2G01830.6 27.596 366 221 11 332 671 392 739 4.44e-28 123
Msa0034190 AT2G01830.6 37.037 135 67 4 967 1091 919 1045 7.36e-16 83.6
Msa0034190 AT2G01830.3 27.596 366 221 11 332 671 392 739 4.44e-28 123
Msa0034190 AT2G01830.3 37.037 135 67 4 967 1091 919 1045 7.36e-16 83.6
Msa0034190 AT2G01830.5 27.596 366 221 11 332 671 404 751 5.80e-28 122
Msa0034190 AT2G01830.5 37.500 136 65 5 967 1091 931 1057 8.06e-16 83.6
Msa0034190 AT5G35750.1 29.305 331 173 12 374 674 573 872 2.36e-25 114
Msa0034190 AT5G35750.1 31.544 149 68 5 967 1091 1032 1170 9.07e-12 70.1
Msa0034190 AT1G66340.1 28.481 316 175 10 372 680 323 594 6.56e-19 93.2
Msa0034190 AT5G10720.1 30.403 273 153 11 393 663 371 608 8.22e-19 93.2
Msa0034190 AT2G40940.1 25.231 325 186 9 358 670 309 588 4.40e-15 80.5

Find 201 sgRNAs with CRISPR-Local

Find 364 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCTTATGATTATATCTTAA+TGG 0.123404 1_1:-62123800 Msa0034190:CDS
TTGCTACCCCATTGATATTA+TGG 0.146001 1_1:-62128032 Msa0034190:CDS
GCTTATCTTGCAGGCCTTAT+TGG 0.151594 1_1:-62127049 Msa0034190:CDS
GATAGTGTTGTTAGATATTA+TGG 0.179176 1_1:+62128453 None:intergenic
AGGTGACATTAGTAGAATTA+AGG 0.196080 1_1:+62128979 None:intergenic
TGTGATCTAGGTTCATTTCT+TGG 0.224149 1_1:+62124132 None:intergenic
ATTGATGCAAGTTGGATAAA+TGG 0.240438 1_1:-62128427 Msa0034190:CDS
AGTTGTTACTAATTCAAAAT+TGG 0.240702 1_1:-62127002 Msa0034190:CDS
GTTTCAATTCAAGCTGTTAA+TGG 0.241296 1_1:-62128151 Msa0034190:CDS
GATGGAAAAGTTATTGTAAA+AGG 0.243895 1_1:-62128211 Msa0034190:CDS
TCAAGGGACAAAATCATATT+TGG 0.248361 1_1:-62128242 Msa0034190:CDS
TTCTGAACTTGGTTTCAAAT+TGG 0.254047 1_1:+62126976 None:intergenic
ACTGACTTGTGATTCTCTTT+AGG 0.274643 1_1:+62126262 None:intergenic
TTCACATGAATTTGCATCAT+TGG 0.275818 1_1:-62128392 Msa0034190:CDS
CACAGGTTGGATATAGTATA+TGG 0.279878 1_1:+62128507 None:intergenic
AGCAAAAGCAAGACTCTTAT+TGG 0.282452 1_1:+62127093 None:intergenic
GATCTTCGTGCTTATCTTGC+AGG 0.288028 1_1:-62127058 Msa0034190:CDS
ATTAGTAACAACTAATTTAG+AGG 0.290279 1_1:+62127012 None:intergenic
ACAAAAGTCCTATGTTAATC+TGG 0.291733 1_1:-62124052 Msa0034190:CDS
TTCTTTCCACTTAATGGTTT+AGG 0.294905 1_1:+62123973 None:intergenic
AGTAAATGCTCTTTCTTGAT+AGG 0.295947 1_1:+62123511 None:intergenic
TTCCTGAGTTCGGTGGTAAT+TGG 0.302430 1_1:-62124173 Msa0034190:CDS
TTTGAAACCAAGTTCAGAAT+TGG 0.304813 1_1:-62126972 Msa0034190:CDS
TGCTACCCCATTGATATTAT+GGG 0.314042 1_1:-62128031 Msa0034190:CDS
GTGTTAGCTGTCCCACAAAA+TGG 0.319563 1_1:-62127304 Msa0034190:CDS
TTCATCTTTCATGATCTTGC+TGG 0.339861 1_1:-62129371 Msa0034190:intron
ATGATTTACCTAGCAAATCT+TGG 0.341823 1_1:+62126918 None:intergenic
TTGGAAGGTACTTGTGATCT+AGG 0.351381 1_1:+62124120 None:intergenic
GCTGTTAAATTTACTGATGA+AGG 0.355175 1_1:-62126487 Msa0034190:CDS
GGTGACATTAGTAGAATTAA+GGG 0.356467 1_1:+62128980 None:intergenic
ATTCAAGCTGTTAATGGTAA+TGG 0.357123 1_1:-62128145 Msa0034190:CDS
GTAGATTGTTCCAAGTCATT+AGG 0.359195 1_1:-62124200 Msa0034190:CDS
TCCAACCAAACAACTTTACT+AGG 0.359940 1_1:+62124300 None:intergenic
GTGATATCAAAACCATTTCA+TGG 0.361788 1_1:-62124225 Msa0034190:CDS
CCAACAAGATCCATGTCTTA+TGG 0.374116 1_1:-62126323 Msa0034190:CDS
ACAATTCGTACTGCTAGTTC+TGG 0.375945 1_1:-62124780 Msa0034190:CDS
ATGCTCTTTCTTGATAGGTT+TGG 0.386579 1_1:+62123516 None:intergenic
ACACCTTTCTTCATTGCCAT+TGG 0.389100 1_1:+62126613 None:intergenic
GAGACAGTGAATTATGAGTA+TGG 0.390792 1_1:-62124846 Msa0034190:CDS
TCACATGAATTTGCATCATT+GGG 0.392411 1_1:-62128391 Msa0034190:CDS
GTATTTGAAGTGGATGATAC+AGG 0.399459 1_1:-62126295 Msa0034190:CDS
TCAATCCTAGTAAAGTTGTT+TGG 0.399703 1_1:-62124305 Msa0034190:CDS
TAGACACACACTTTCATCAT+TGG 0.402470 1_1:+62124101 None:intergenic
TTCTATTCCCATAATATCAA+TGG 0.403961 1_1:+62128024 None:intergenic
GTAGGAACTGGCTTGGGACT+TGG 0.405420 1_1:-62126196 Msa0034190:CDS
GAGGGGCTAACATGGAGTTT+TGG 0.406382 1_1:+62124735 None:intergenic
AGTCTTCGGAGATGAGTTCT+AGG 0.419954 1_1:-62124524 Msa0034190:CDS
ATCTTACAAAGCTTAGAAAA+TGG 0.421080 1_1:+62124354 None:intergenic
AACAATCTACTACCATGAAA+TGG 0.422179 1_1:+62124213 None:intergenic
AACACTCTTGTGGTTAGTCT+TGG 0.422431 1_1:+62126417 None:intergenic
ATTAGGCTTCTTCCTGAGTT+CGG 0.422475 1_1:-62124183 Msa0034190:CDS
ACATTTCAATCAAACCAATA+AGG 0.422617 1_1:+62127035 None:intergenic
CAGTTGTTCATAGAGAGCTT+AGG 0.425096 1_1:-62124648 Msa0034190:CDS
TTTGTTGATGATGATTTCAT+TGG 0.427329 1_1:+62129026 None:intergenic
TCATATTTGGCTACCAAAGA+TGG 0.429385 1_1:-62128229 Msa0034190:CDS
ATGGCTACTTTGAGATCTCT+TGG 0.429609 1_1:-62123907 Msa0034190:CDS
TTATATCTTAATGGATTGTC+AGG 0.430305 1_1:-62123791 Msa0034190:intron
CCATAAGACATGGATCTTGT+TGG 0.432881 1_1:+62126323 None:intergenic
AGTTGTTCATAGAGAGCTTA+GGG 0.434205 1_1:-62124647 Msa0034190:CDS
TCCTAGTAAAGTTGTTTGGT+TGG 0.434623 1_1:-62124301 Msa0034190:CDS
TTGGTCTCCAATTCTGAACT+TGG 0.436377 1_1:+62126965 None:intergenic
TCTATTCCCATAATATCAAT+GGG 0.437409 1_1:+62128025 None:intergenic
GAAAGGTGTAGAAGTTGTAT+TGG 0.437547 1_1:-62126599 Msa0034190:CDS
CATAAGACATGGATCTTGTT+GGG 0.439105 1_1:+62126324 None:intergenic
GACAAGCTGACCACTGAGAC+TGG 0.440049 1_1:-62123556 Msa0034190:CDS
AAGAGTTCCTTTCAAAGCTA+TGG 0.440702 1_1:-62124472 Msa0034190:CDS
CCTTTCAAAGCTATGGATCA+TGG 0.441919 1_1:-62124465 Msa0034190:CDS
TCAAAGTTCACCGGAGTCTT+CGG 0.442260 1_1:-62124538 Msa0034190:CDS
AATCCAAGTCATAAAGAAAA+GGG 0.444621 1_1:-62127268 Msa0034190:CDS
CACTGTCTCATTCTCACATA+AGG 0.445103 1_1:+62124860 None:intergenic
TCTGTTGGCCAAGTAGGAAC+TGG 0.448175 1_1:-62126208 Msa0034190:CDS
TATCATCTTGATCAATTGCT+TGG 0.448900 1_1:+62124250 None:intergenic
GGAGACCAACTTAAAACAAA+TGG 0.449087 1_1:-62126951 Msa0034190:CDS
TAATCCAAGTCATAAAGAAA+AGG 0.450153 1_1:-62127269 Msa0034190:CDS
ATTATCATTGATGCAAATGC+AGG 0.450739 1_1:-62124378 Msa0034190:CDS
TATGTTAATCTGGGAAGAAA+AGG 0.456024 1_1:-62124042 Msa0034190:CDS
ATGGTAATGGAGATCTAATA+AGG 0.458097 1_1:-62128132 Msa0034190:CDS
GTTGTGTTATTGTAGGCATA+TGG 0.458179 1_1:-62129188 Msa0034190:intron
GCCTCAAACCCATCCTTCAC+TGG 0.462390 1_1:+62123652 None:intergenic
GTCCCAAGCCAGTTCCTACT+TGG 0.464624 1_1:+62126200 None:intergenic
TAGGAACTGGCTTGGGACTT+GGG 0.466445 1_1:-62126195 Msa0034190:CDS
GGCCAAGTAGGAACTGGCTT+GGG 0.467713 1_1:-62126202 Msa0034190:CDS
GAGAATTCTGTTGGCCAAGT+AGG 0.471261 1_1:-62126214 Msa0034190:CDS
AGAATAGGAGGGGTCTCTCT+TGG 0.472858 1_1:-62128313 Msa0034190:CDS
GAAAATAGTGACATAATGTA+AGG 0.473865 1_1:-62123469 None:intergenic
GTTGTATTGGACTCTTGTAA+TGG 0.481853 1_1:-62126586 Msa0034190:CDS
TGATATTATGGGAATAGAAT+CGG 0.482331 1_1:-62128020 Msa0034190:intron
GCCTCTGAGAGGGGCTAACA+TGG 0.484367 1_1:+62124727 None:intergenic
ACTTGGGATTGTGCAGTCAT+TGG 0.486079 1_1:-62126179 Msa0034190:intron
TCCATTAAGATATAATCATA+AGG 0.487002 1_1:+62123799 None:intergenic
TCAGCTAGAATCAACAGAAT+AGG 0.488864 1_1:-62128328 Msa0034190:CDS
AGCAATCCTAAACCATTAAG+TGG 0.490150 1_1:-62123979 Msa0034190:CDS
GCCAGTGAAGGATGGGTTTG+AGG 0.491157 1_1:-62123653 Msa0034190:CDS
TCTTGATAGGTTTGGTAATG+TGG 0.491525 1_1:+62123524 None:intergenic
TAATCAACACTACTCTCAAA+AGG 0.491934 1_1:+62124273 None:intergenic
TGATTTACCTAGCAAATCTT+GGG 0.494105 1_1:+62126919 None:intergenic
ATTCACGTGTGAAAGGTGAT+AGG 0.495625 1_1:-62126549 Msa0034190:CDS
TTCAATGCTTGAAATAATAA+CGG 0.495873 1_1:+62128658 None:intergenic
GGTATTGTGGACAAGGAAGT+TGG 0.498320 1_1:-62124921 Msa0034190:CDS
TTGACACAAATCTCATACAT+AGG 0.498626 1_1:-62128622 Msa0034190:CDS
CAAGTTAAAGAGAATTCTGT+TGG 0.500351 1_1:-62126223 Msa0034190:CDS
CAAGATAAGCACGAAGATCA+TGG 0.500470 1_1:+62127062 None:intergenic
CAGGAAGAAGCCTAATGACT+TGG 0.500658 1_1:+62124190 None:intergenic
AGGAGGATTAGTAAAATCCT+TGG 0.504201 1_1:+62123819 None:intergenic
TTCTAGGTACGTTTGATGCA+TGG 0.504400 1_1:-62124951 Msa0034190:intron
TATGCTGAGAAAGATTTGTA+TGG 0.505750 1_1:-62123926 Msa0034190:CDS
ATTCCAGTGTCATGGTTCAC+AGG 0.507966 1_1:+62128490 None:intergenic
CAGTGTCATGGTTCACAGGT+TGG 0.508152 1_1:+62128494 None:intergenic
GACAGATGCCAGTGAAGGAT+GGG 0.510140 1_1:-62123660 Msa0034190:intron
CCATGATCCATAGCTTTGAA+AGG 0.512640 1_1:+62124465 None:intergenic
CAAAAGTCCTATGTTAATCT+GGG 0.514695 1_1:-62124051 Msa0034190:CDS
CTTTCTTCATTGCCATTGGA+TGG 0.517203 1_1:+62126617 None:intergenic
GACAAGGAAGTTGGCAAAAG+AGG 0.518131 1_1:-62124912 Msa0034190:CDS
ATGATAATCAAAACAAAACT+TGG 0.518308 1_1:+62124393 None:intergenic
TGGAGATCTAATAAGGAATG+AGG 0.518743 1_1:-62128125 Msa0034190:CDS
CATCCAATGGCAATGAAGAA+AGG 0.522261 1_1:-62126616 Msa0034190:CDS
CTATCAATATTGATGCAAGT+TGG 0.529019 1_1:-62128435 Msa0034190:CDS
CGTTTGATGCATGGAGACAT+TGG 0.531016 1_1:-62124942 Msa0034190:CDS
GGACAGATGCCAGTGAAGGA+TGG 0.536750 1_1:-62123661 Msa0034190:intron
GAGCTTAGGGATTAAAGTCA+AGG 0.538142 1_1:-62124634 Msa0034190:CDS
GAAGGCTCAGGCCTCTGAGA+GGG 0.538284 1_1:+62124717 None:intergenic
AATTGTGCCCAAGATTTGCT+AGG 0.541010 1_1:-62126926 Msa0034190:intron
GACAATGCGAGTGATATAAT+CGG 0.541959 1_1:+62128270 None:intergenic
CTTTCTCTCAGCTTGTTCTG+TGG 0.542457 1_1:+62127120 None:intergenic
ATCTCATACATAGGAATGGA+AGG 0.542582 1_1:-62128613 Msa0034190:CDS
TATGAGTATGGATCAACCTC+AGG 0.543399 1_1:-62124834 Msa0034190:CDS
CATTCTTTACATTACTGATG+AGG 0.545789 1_1:-62124688 Msa0034190:CDS
CTCGCATTGTCGATCGTCAA+GGG 0.547004 1_1:-62128258 Msa0034190:CDS
TATTTGAAGTGGATGATACA+GGG 0.550570 1_1:-62126294 Msa0034190:CDS
CAAGGTGAAATAGAAGAAAG+TGG 0.553365 1_1:-62124009 Msa0034190:CDS
GCTAGAATCAACAGAATAGG+AGG 0.555811 1_1:-62128325 Msa0034190:CDS
GACACAAGCAAGATTGAGGC+AGG 0.556358 1_1:-62126706 Msa0034190:CDS
TGTACTCTAACTCATCTAGT+GGG 0.561197 1_1:-62128546 Msa0034190:CDS
ACTATTGACCAATGTGAGAA+TGG 0.561890 1_1:-62123877 Msa0034190:CDS
AGAGAGATGGAGAAACACTA+TGG 0.561980 1_1:-62123616 Msa0034190:CDS
ATCAAACATTCACGTGTGAA+AGG 0.562833 1_1:-62126556 Msa0034190:CDS
ACAAATCTCATACATAGGAA+TGG 0.563392 1_1:-62128617 Msa0034190:CDS
AGCAAGATCATGAAAGATGA+AGG 0.564158 1_1:+62129373 None:intergenic
CTGTTAAATTTACTGATGAA+GGG 0.567152 1_1:-62126486 Msa0034190:CDS
GACACCATGTTGGTATCTCA+TGG 0.568120 1_1:-62129141 Msa0034190:CDS
TGGCCAAGTAGGAACTGGCT+TGG 0.570068 1_1:-62126203 Msa0034190:CDS
AGGATGGGTTTGAGGCAACA+AGG 0.571342 1_1:-62123645 Msa0034190:CDS
ACTCGCATTGTCGATCGTCA+AGG 0.572216 1_1:-62128259 Msa0034190:CDS
ATGTAAAGAATGACATGTGA+AGG 0.573120 1_1:+62124699 None:intergenic
TCTTGCAAGGATCAAGCTGT+TGG 0.574460 1_1:-62128094 Msa0034190:CDS
CACACACTTTCATCATTGGA+AGG 0.574607 1_1:+62124105 None:intergenic
GTGTTGTGAAATCTTTGTCT+TGG 0.576550 1_1:-62126399 Msa0034190:CDS
GGAGATCTAATAAGGAATGA+GGG 0.576644 1_1:-62128124 Msa0034190:CDS
GGCTGTGAGAACTGTTCAAG+AGG 0.577188 1_1:-62123848 Msa0034190:CDS
AAGATTTCACAACACTCTTG+TGG 0.579252 1_1:+62126407 None:intergenic
ATCCAATTACCACCGAACTC+AGG 0.583478 1_1:+62124171 None:intergenic
GCTGACCACTGAGACTGGAA+TGG 0.584171 1_1:-62123551 Msa0034190:CDS
AGTTGATTTGTACCATCCAA+TGG 0.585418 1_1:-62126629 Msa0034190:CDS
ACTTGACACAAGCAAGATTG+AGG 0.587753 1_1:-62126710 Msa0034190:CDS
TATCAGTGATCAAAGTTCAC+CGG 0.592353 1_1:-62124547 Msa0034190:CDS
TTGCCTCATTGACACCATGT+TGG 0.593071 1_1:-62129151 Msa0034190:CDS
AAGTGTGGAACAATGTTGGA+AGG 0.593740 1_1:-62124079 Msa0034190:CDS
GCATGGAGACATTGGTATTG+TGG 0.595262 1_1:-62124934 Msa0034190:CDS
AGAAAAGGTTCTGTTCATCA+AGG 0.596627 1_1:-62124027 Msa0034190:CDS
CCTCTTCACCATTCTCACAT+TGG 0.597986 1_1:+62123869 None:intergenic
ATACAAATCTTTCTCAGCAT+AGG 0.598094 1_1:+62123928 None:intergenic
AGGCTTCTTCCTGAGTTCGG+TGG 0.599749 1_1:-62124180 Msa0034190:CDS
GGCACATAACAGTTAGAGCA+TGG 0.600016 1_1:-62126465 Msa0034190:CDS
TGATTTATCCTCTCTCCTTG+AGG 0.602251 1_1:-62126656 Msa0034190:CDS
TGAGGGAGCTGTATCTTGCA+AGG 0.603521 1_1:-62128107 Msa0034190:CDS
AAGGCTCAGGCCTCTGAGAG+GGG 0.603713 1_1:+62124718 None:intergenic
AGAATGACATGTGAAGGCTC+AGG 0.609075 1_1:+62124705 None:intergenic
AACAAGGGAGATAAGAGAGA+TGG 0.610075 1_1:-62123629 Msa0034190:CDS
GAAGTGGATGATACAGGGAA+AGG 0.611039 1_1:-62126289 Msa0034190:CDS
GTCTAAGTGTGGAACAATGT+TGG 0.612167 1_1:-62124083 Msa0034190:CDS
ATGTACTCTAACTCATCTAG+TGG 0.614715 1_1:-62128547 Msa0034190:CDS
GAACTCATCTCCGAAGACTC+CGG 0.615301 1_1:+62124528 None:intergenic
CAACCTGTGAACCATGACAC+TGG 0.615905 1_1:-62128493 Msa0034190:CDS
AACTACATCCTCAAGGAGAG+AGG 0.617424 1_1:+62126648 None:intergenic
AGACATTGGTATTGTGGACA+AGG 0.619613 1_1:-62124928 Msa0034190:CDS
TGTTCAAGAGGGTTTAACCA+AGG 0.619844 1_1:-62123836 Msa0034190:CDS
GGATGGGTTTGAGGCAACAA+GGG 0.621462 1_1:-62123644 Msa0034190:CDS
GTACTCTAACTCATCTAGTG+GGG 0.623166 1_1:-62128545 Msa0034190:CDS
AACATGGTGTCAATGAGGCA+AGG 0.632743 1_1:+62129153 None:intergenic
AGTGTGGAACAATGTTGGAA+GGG 0.632865 1_1:-62124078 Msa0034190:CDS
CTAGAATCAACAGAATAGGA+GGG 0.634091 1_1:-62128324 Msa0034190:CDS
AGTTAGAGCATGGACTCAGA+AGG 0.635220 1_1:-62126455 Msa0034190:CDS
ACAAATCAACTACATCCTCA+AGG 0.638614 1_1:+62126641 None:intergenic
AATACAAAATCCATAAGACA+TGG 0.641986 1_1:+62126313 None:intergenic
GCTGTGAGAACTGTTCAAGA+GGG 0.647146 1_1:-62123847 Msa0034190:CDS
TACTCTAACTCATCTAGTGG+GGG 0.650632 1_1:-62128544 Msa0034190:CDS
CTTGGTGTGAACATCAGAGA+AGG 0.651051 1_1:+62128959 None:intergenic
CCAATGTGAGAATGGTGAAG+AGG 0.657628 1_1:-62123869 Msa0034190:CDS
TGAAGGCTCAGGCCTCTGAG+AGG 0.658399 1_1:+62124716 None:intergenic
TGAAAGTGTGTGTCTAAGTG+TGG 0.660501 1_1:-62124094 Msa0034190:CDS
TGTGAACCATGACACTGGAA+TGG 0.664217 1_1:-62128488 Msa0034190:CDS
ATACCAACATGGTGTCAATG+AGG 0.665423 1_1:+62129148 None:intergenic
ATTAAGATATAATCATAAGG+AGG 0.668188 1_1:+62123802 None:intergenic
AATTGGACAGATGCCAGTGA+AGG 0.672213 1_1:-62123665 Msa0034190:intron
TATGAGATTTGTGTCAAGTG+AGG 0.675612 1_1:+62128628 None:intergenic
GAAATCCATTCCAGTCTCAG+TGG 0.681772 1_1:+62123546 None:intergenic
TAGAATCAACAGAATAGGAG+GGG 0.688378 1_1:-62128323 Msa0034190:CDS
TCCATGTTAGCCCCTCTCAG+AGG 0.694979 1_1:-62124728 Msa0034190:CDS
CTTCTCTGATGTTCACACCA+AGG 0.706528 1_1:-62128958 Msa0034190:intron
CTATTCCCATAATATCAATG+GGG 0.765530 1_1:+62128026 None:intergenic
GTGACCATGAGATACCAACA+TGG 0.814649 1_1:+62129137 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAGTAGTAAAATTATTTTTT+GGG + chr1_1:62125001-62125020 None:intergenic 10.0%
!!! AAAGTAGTAAAATTATTTTT+TGG + chr1_1:62125002-62125021 None:intergenic 10.0%
!!! AACTAATTTTATTAAATAAC+AGG - chr1_1:62125527-62125546 Msa0034190:intron 10.0%
!!! AAAATATTTATGGTTTTGAA+GGG + chr1_1:62123950-62123969 None:intergenic 15.0%
!! ATAAGCAAACAAAATATTTA+TGG + chr1_1:62123960-62123979 None:intergenic 15.0%
!! TATCATTAAAAATCATCAAA+CGG + chr1_1:62124686-62124705 None:intergenic 15.0%
!!! GTGTTAAATTTTCAAATTAT+GGG + chr1_1:62125294-62125313 None:intergenic 15.0%
!!! TGTGTTAAATTTTCAAATTA+TGG + chr1_1:62125295-62125314 None:intergenic 15.0%
!!! TTTTATTTTGTTACAATGTT+AGG - chr1_1:62126111-62126130 Msa0034190:intron 15.0%
!!! TGATTTTTTTACAACTAAAA+GGG + chr1_1:62127863-62127882 None:intergenic 15.0%
!!! ATGATTTTTTTACAACTAAA+AGG + chr1_1:62127864-62127883 None:intergenic 15.0%
!! CATTTAATAAAAATGTCAAA+TGG - chr1_1:62127881-62127900 Msa0034190:intron 15.0%
!!! AATTGTTAATTTTTTCTCTA+GGG + chr1_1:62128065-62128084 None:intergenic 15.0%
!!! ATAACTTAAGCTTTATATTT+TGG - chr1_1:62129145-62129164 Msa0034190:CDS 15.0%
!!! TTGATTTGTAACAAAGATTA+AGG - chr1_1:62123580-62123599 Msa0034190:CDS 20.0%
!!! ATTATTTGTTGTGTTATTGT+AGG - chr1_1:62123664-62123683 Msa0034190:intron 20.0%
!!! CAAAATATTTATGGTTTTGA+AGG + chr1_1:62123951-62123970 None:intergenic 20.0%
!!! AAATATCTTTGTAGCTTTAA+TGG - chr1_1:62124149-62124168 Msa0034190:CDS 20.0%
!! TTAATTTATTTGCACTTTGT+AGG - chr1_1:62124173-62124192 Msa0034190:CDS 20.0%
!! TTCAATGCTTGAAATAATAA+CGG + chr1_1:62124204-62124223 None:intergenic 20.0%
!! CTTAGTTAATATACTACTAT+TGG + chr1_1:62124929-62124948 None:intergenic 20.0%
!!! AAAGTACTATTTGGTATTTT+CGG + chr1_1:62124975-62124994 None:intergenic 20.0%
!! TTATGGAATGTGTTTATAAA+CGG + chr1_1:62125178-62125197 None:intergenic 20.0%
!!! TCTTTGAGTTAAAACTATTA+AGG + chr1_1:62125381-62125400 None:intergenic 20.0%
!! ATTAGTAACAACTAATTTAG+AGG + chr1_1:62125850-62125869 None:intergenic 20.0%
!! AGTTGTTACTAATTCAAAAT+TGG - chr1_1:62125857-62125876 Msa0034190:intron 20.0%
!!! ATTATCCATTTGTTTTAAGT+TGG + chr1_1:62125916-62125935 None:intergenic 20.0%
!! TTGTACTAAATAGTATATCA+CGG + chr1_1:62126050-62126069 None:intergenic 20.0%
!! AAATGTTTGATATATAAGAG+AGG + chr1_1:62126955-62126974 None:intergenic 20.0%
!!! TAATGTAGTTAACAACTTTT+TGG - chr1_1:62127588-62127607 Msa0034190:intron 20.0%
!! AGTTCATATATGATATAGAA+AGG - chr1_1:62127680-62127699 Msa0034190:intron 20.0%
!! ATATATGATATAGAAAGGTT+AGG - chr1_1:62127685-62127704 Msa0034190:intron 20.0%
!! TTAAGATTCAAATCATGAAT+TGG + chr1_1:62127819-62127838 None:intergenic 20.0%
!!! GAATTGTTAATTTTTTCTCT+AGG + chr1_1:62128066-62128085 None:intergenic 20.0%
!! AAGAAGATCAAAAAAGAAAA+GGG - chr1_1:62128283-62128302 Msa0034190:CDS 20.0%
!! ATTAAGATATAATCATAAGG+AGG + chr1_1:62129060-62129079 None:intergenic 20.0%
!! TCCTTATGATTATATCTTAA+TGG - chr1_1:62129059-62129078 Msa0034190:CDS 20.0%
!! TCCATTAAGATATAATCATA+AGG + chr1_1:62129063-62129082 None:intergenic 20.0%
!!! TTTGTTGATGATGATTTCAT+TGG + chr1_1:62123836-62123855 None:intergenic 25.0%
! AGGGAAATTATACAAGAAAT+GGG + chr1_1:62123931-62123950 None:intergenic 25.0%
! AAGGGAAATTATACAAGAAA+TGG + chr1_1:62123932-62123951 None:intergenic 25.0%
!! GATAGTGTTGTTAGATATTA+TGG + chr1_1:62124409-62124428 None:intergenic 25.0%
!! TACAATAACTTTTCCATCTT+TGG + chr1_1:62124646-62124665 None:intergenic 25.0%
! GATGGAAAAGTTATTGTAAA+AGG - chr1_1:62124648-62124667 Msa0034190:CDS 25.0%
! TCTATTCCCATAATATCAAT+GGG + chr1_1:62124837-62124856 None:intergenic 25.0%
! TTCTATTCCCATAATATCAA+TGG + chr1_1:62124838-62124857 None:intergenic 25.0%
! TGATATTATGGGAATAGAAT+CGG - chr1_1:62124839-62124858 Msa0034190:CDS 25.0%
!! AAGTACTATTTGGTATTTTC+GGG + chr1_1:62124974-62124993 None:intergenic 25.0%
! TAATCCAAGTCATAAAGAAA+AGG - chr1_1:62125590-62125609 Msa0034190:intron 25.0%
! AATCCAAGTCATAAAGAAAA+GGG - chr1_1:62125591-62125610 Msa0034190:intron 25.0%
!! AGTTTTCTATTCTTGAATGT+TGG - chr1_1:62125663-62125682 Msa0034190:intron 25.0%
! ACATTTCAATCAAACCAATA+AGG + chr1_1:62125827-62125846 None:intergenic 25.0%
! TACAAAATATTGTTAACGAG+CGG - chr1_1:62126065-62126084 Msa0034190:intron 25.0%
! CTGTTAAATTTACTGATGAA+GGG - chr1_1:62126373-62126392 Msa0034190:CDS 25.0%
! AATACAAAATCCATAAGACA+TGG + chr1_1:62126549-62126568 None:intergenic 25.0%
!! TATGGATTTTGTATTTGAAG+TGG - chr1_1:62126554-62126573 Msa0034190:CDS 25.0%
! TTAGTTGTCAATTCATTTAG+AGG - chr1_1:62126761-62126780 Msa0034190:intron 25.0%
! TGTTTCATTAGAATGAATCA+AGG + chr1_1:62127558-62127577 None:intergenic 25.0%
!!! TTTTTTTACAACTAAAAGGG+AGG + chr1_1:62127860-62127879 None:intergenic 25.0%
!!! AATGTCAAATGGTTTTTTCT+AGG - chr1_1:62127892-62127911 Msa0034190:intron 25.0%
!!! TTAATTTTTTCTCTAGGGTT+TGG + chr1_1:62128060-62128079 None:intergenic 25.0%
! CAAGAAGATCAAAAAAGAAA+AGG - chr1_1:62128282-62128301 Msa0034190:CDS 25.0%
! ATGTTCAAGAAGAAAAACAA+TGG - chr1_1:62128436-62128455 Msa0034190:CDS 25.0%
! ATCTTACAAAGCTTAGAAAA+TGG + chr1_1:62128508-62128527 None:intergenic 25.0%
! AAAAACTTCTTTCCACTTAA+TGG + chr1_1:62128895-62128914 None:intergenic 25.0%
!! ATTAAGTGGAAAGAAGTTTT+TGG - chr1_1:62128894-62128913 Msa0034190:intron 25.0%
!!! TTATATCTTAATGGATTGTC+AGG - chr1_1:62129068-62129087 Msa0034190:CDS 25.0%
!! TTAACTTTTCCACAATGAAT+TGG - chr1_1:62129177-62129196 Msa0034190:intron 25.0%
GGTGACATTAGTAGAATTAA+GGG + chr1_1:62123882-62123901 None:intergenic 30.0%
AGGTGACATTAGTAGAATTA+AGG + chr1_1:62123883-62123902 None:intergenic 30.0%
!!! TATTTTTTTTCTTTTCGCGC+TGG + chr1_1:62124134-62124153 None:intergenic 30.0%
ATTTATTTGCACTTTGTAGG+TGG - chr1_1:62124176-62124195 Msa0034190:CDS 30.0%
TTGACACAAATCTCATACAT+AGG - chr1_1:62124237-62124256 Msa0034190:CDS 30.0%
ACAAATCTCATACATAGGAA+TGG - chr1_1:62124242-62124261 Msa0034190:CDS 30.0%
! TTTTTCACACACTACAATGA+TGG - chr1_1:62124273-62124292 Msa0034190:CDS 30.0%
CTATCAATATTGATGCAAGT+TGG - chr1_1:62124424-62124443 Msa0034190:CDS 30.0%
! ATTGATGCAAGTTGGATAAA+TGG - chr1_1:62124432-62124451 Msa0034190:CDS 30.0%
TTCACATGAATTTGCATCAT+TGG - chr1_1:62124467-62124486 Msa0034190:CDS 30.0%
TCACATGAATTTGCATCATT+GGG - chr1_1:62124468-62124487 Msa0034190:CDS 30.0%
TCAAGGGACAAAATCATATT+TGG - chr1_1:62124617-62124636 Msa0034190:CDS 30.0%
GTTTCAATTCAAGCTGTTAA+TGG - chr1_1:62124708-62124727 Msa0034190:CDS 30.0%
ATTCAAGCTGTTAATGGTAA+TGG - chr1_1:62124714-62124733 Msa0034190:CDS 30.0%
!! ATGGTAATGGAGATCTAATA+AGG - chr1_1:62124727-62124746 Msa0034190:CDS 30.0%
CTATTCCCATAATATCAATG+GGG + chr1_1:62124836-62124855 None:intergenic 30.0%
!!! TATTTTCGGGTACAAAAGTA+CGG + chr1_1:62124961-62124980 None:intergenic 30.0%
! TTTGGGTACAAAGTACTATT+TGG + chr1_1:62124984-62125003 None:intergenic 30.0%
! TTTTCACAAAACATCTCTCT+TGG - chr1_1:62125069-62125088 Msa0034190:intron 30.0%
ACGACATTTGTGAACATATT+TGG + chr1_1:62125460-62125479 None:intergenic 30.0%
! AATCCCTTTTCTTTATGACT+TGG + chr1_1:62125597-62125616 None:intergenic 30.0%
TTCTGAACTTGGTTTCAAAT+TGG + chr1_1:62125886-62125905 None:intergenic 30.0%
! TTTGAAACCAAGTTCAGAAT+TGG - chr1_1:62125887-62125906 Msa0034190:intron 30.0%
TGATTTACCTAGCAAATCTT+GGG + chr1_1:62125943-62125962 None:intergenic 30.0%
ATGATTTACCTAGCAAATCT+TGG + chr1_1:62125944-62125963 None:intergenic 30.0%
TTTGCTAGGTAAATCATCAT+AGG - chr1_1:62125947-62125966 Msa0034190:intron 30.0%
TGCTACCAATGTTGTTAAAT+AGG - chr1_1:62125974-62125993 Msa0034190:intron 30.0%
GCTACCAATGTTGTTAAATA+GGG - chr1_1:62125975-62125994 Msa0034190:intron 30.0%
GCTGTTAAATTTACTGATGA+AGG - chr1_1:62126372-62126391 Msa0034190:CDS 30.0%
! AGTCTTGGATTTTTGCAATT+TGG + chr1_1:62126430-62126449 None:intergenic 30.0%
! TATTTGAAGTGGATGATACA+GGG - chr1_1:62126565-62126584 Msa0034190:CDS 30.0%
CAAGTTAAAGAGAATTCTGT+TGG - chr1_1:62126636-62126655 Msa0034190:CDS 30.0%
GACTCTTATCGTCTATAAAT+AGG + chr1_1:62126980-62126999 None:intergenic 30.0%
! CACACATTTTACCCATTTAT+AGG - chr1_1:62127009-62127028 Msa0034190:CDS 30.0%
CTAGTGTTTGTATCAAGTAT+AGG + chr1_1:62127098-62127117 None:intergenic 30.0%
CTAGTGTTTGGATTAAGTAT+AGG + chr1_1:62127234-62127253 None:intergenic 30.0%
CCTATGAATAGGTAAAATGT+TGG + chr1_1:62127436-62127455 None:intergenic 30.0%
! CCAACATTTTACCTATTCAT+AGG - chr1_1:62127433-62127452 Msa0034190:intron 30.0%
AGAGTCATATTGTTTGTGTT+GGG + chr1_1:62127490-62127509 None:intergenic 30.0%
TAGAGTCATATTGTTTGTGT+TGG + chr1_1:62127491-62127510 None:intergenic 30.0%
AAAGACAAAAGAGAAGTGAT+TGG + chr1_1:62127628-62127647 None:intergenic 30.0%
ATGTAAAGAATGACATGTGA+AGG + chr1_1:62128163-62128182 None:intergenic 30.0%
CATTCTTTACATTACTGATG+AGG - chr1_1:62128171-62128190 Msa0034190:CDS 30.0%
ATTATCATTGATGCAAATGC+AGG - chr1_1:62128481-62128500 Msa0034190:CDS 30.0%
TCAATCCTAGTAAAGTTGTT+TGG - chr1_1:62128554-62128573 Msa0034190:CDS 30.0%
TAATCAACACTACTCTCAAA+AGG + chr1_1:62128589-62128608 None:intergenic 30.0%
TATCATCTTGATCAATTGCT+TGG + chr1_1:62128612-62128631 None:intergenic 30.0%
GTGATATCAAAACCATTTCA+TGG - chr1_1:62128634-62128653 Msa0034190:CDS 30.0%
AACAATCTACTACCATGAAA+TGG + chr1_1:62128649-62128668 None:intergenic 30.0%
ACAAAAGTCCTATGTTAATC+TGG - chr1_1:62128807-62128826 Msa0034190:intron 30.0%
CAAAAGTCCTATGTTAATCT+GGG - chr1_1:62128808-62128827 Msa0034190:intron 30.0%
! TTTTCTTCCCAGATTAACAT+AGG + chr1_1:62128818-62128837 None:intergenic 30.0%
TATGTTAATCTGGGAAGAAA+AGG - chr1_1:62128817-62128836 Msa0034190:intron 30.0%
TTCTTTCCACTTAATGGTTT+AGG + chr1_1:62128889-62128908 None:intergenic 30.0%
ATACAAATCTTTCTCAGCAT+AGG + chr1_1:62128934-62128953 None:intergenic 30.0%
TATGCTGAGAAAGATTTGTA+TGG - chr1_1:62128933-62128952 Msa0034190:intron 30.0%
AGTAAATGCTCTTTCTTGAT+AGG + chr1_1:62129351-62129370 None:intergenic 30.0%
AGCAAGATCATGAAAGATGA+AGG + chr1_1:62123489-62123508 None:intergenic 35.0%
TTCATCTTTCATGATCTTGC+TGG - chr1_1:62123488-62123507 Msa0034190:CDS 35.0%
!! GAAGAAAATAAAGAGTGCTG+AGG + chr1_1:62123557-62123576 None:intergenic 35.0%
! GTTGTGTTATTGTAGGCATA+TGG - chr1_1:62123671-62123690 Msa0034190:intron 35.0%
TACAAGAAATGGGTATACCT+TGG + chr1_1:62123921-62123940 None:intergenic 35.0%
! TTTTTATTACCGAACTGTCG+TGG - chr1_1:62124008-62124027 Msa0034190:CDS 35.0%
!!! GCGAAGGAAATTCACTTTTT+TGG - chr1_1:62124056-62124075 Msa0034190:CDS 35.0%
AATGTACTCTAGATTTGCGA+AGG - chr1_1:62124093-62124112 Msa0034190:CDS 35.0%
TATGAGATTTGTGTCAAGTG+AGG + chr1_1:62124234-62124253 None:intergenic 35.0%
ATCTCATACATAGGAATGGA+AGG - chr1_1:62124246-62124265 Msa0034190:CDS 35.0%
ATGTACTCTAACTCATCTAG+TGG - chr1_1:62124312-62124331 Msa0034190:CDS 35.0%
TGTACTCTAACTCATCTAGT+GGG - chr1_1:62124313-62124332 Msa0034190:CDS 35.0%
! CACAGGTTGGATATAGTATA+TGG + chr1_1:62124355-62124374 None:intergenic 35.0%
! ATGACACTGGAATGGTTTTT+GGG - chr1_1:62124379-62124398 Msa0034190:CDS 35.0%
TCAGCTAGAATCAACAGAAT+AGG - chr1_1:62124531-62124550 Msa0034190:CDS 35.0%
CTAGAATCAACAGAATAGGA+GGG - chr1_1:62124535-62124554 Msa0034190:CDS 35.0%
TAGAATCAACAGAATAGGAG+GGG - chr1_1:62124536-62124555 Msa0034190:CDS 35.0%
GACAATGCGAGTGATATAAT+CGG + chr1_1:62124592-62124611 None:intergenic 35.0%
TCATATTTGGCTACCAAAGA+TGG - chr1_1:62124630-62124649 Msa0034190:CDS 35.0%
TGGAGATCTAATAAGGAATG+AGG - chr1_1:62124734-62124753 Msa0034190:CDS 35.0%
GGAGATCTAATAAGGAATGA+GGG - chr1_1:62124735-62124754 Msa0034190:CDS 35.0%
TTGCTACCCCATTGATATTA+TGG - chr1_1:62124827-62124846 Msa0034190:CDS 35.0%
TGCTACCCCATTGATATTAT+GGG - chr1_1:62124828-62124847 Msa0034190:CDS 35.0%
ACTCATACGTGAAATTGATG+TGG - chr1_1:62125267-62125286 Msa0034190:intron 35.0%
! AGATGAGAGATCCATTTTGT+GGG + chr1_1:62125569-62125588 None:intergenic 35.0%
! AAGATGAGAGATCCATTTTG+TGG + chr1_1:62125570-62125589 None:intergenic 35.0%
AGCAAAAGCAAGACTCTTAT+TGG + chr1_1:62125769-62125788 None:intergenic 35.0%
GGAGACCAACTTAAAACAAA+TGG - chr1_1:62125908-62125927 Msa0034190:intron 35.0%
TGTGCCCTATTTAACAACAT+TGG + chr1_1:62125982-62126001 None:intergenic 35.0%
AAAAATGCAACTAGAGGAAG+AGG - chr1_1:62126176-62126195 Msa0034190:intron 35.0%
ACAAATCAACTACATCCTCA+AGG + chr1_1:62126221-62126240 None:intergenic 35.0%
!! AGTTGATTTGTACCATCCAA+TGG - chr1_1:62126230-62126249 Msa0034190:CDS 35.0%
! GAAAGGTGTAGAAGTTGTAT+TGG - chr1_1:62126260-62126279 Msa0034190:CDS 35.0%
GTTGTATTGGACTCTTGTAA+TGG - chr1_1:62126273-62126292 Msa0034190:CDS 35.0%
ATCAAACATTCACGTGTGAA+AGG - chr1_1:62126303-62126322 Msa0034190:CDS 35.0%
AAGATTTCACAACACTCTTG+TGG + chr1_1:62126455-62126474 None:intergenic 35.0%
GTGTTGTGAAATCTTTGTCT+TGG - chr1_1:62126460-62126479 Msa0034190:CDS 35.0%
CATAAGACATGGATCTTGTT+GGG + chr1_1:62126538-62126557 None:intergenic 35.0%
! GTATTTGAAGTGGATGATAC+AGG - chr1_1:62126564-62126583 Msa0034190:CDS 35.0%
!! ACTGACTTGTGATTCTCTTT+AGG + chr1_1:62126600-62126619 None:intergenic 35.0%
CATTATTGGGTGAATGCTTT+AGG - chr1_1:62126834-62126853 Msa0034190:intron 35.0%
AAATGGGTAAAATGTGTGAG+TGG + chr1_1:62127007-62127026 None:intergenic 35.0%
!!! ATTGTTGGGTTTTAAGTGAG+TGG + chr1_1:62127050-62127069 None:intergenic 35.0%
GTGTTTGTATCAAGTATAGG+AGG + chr1_1:62127095-62127114 None:intergenic 35.0%
TTGGATTAAGTATAGGAGGT+GGG + chr1_1:62127227-62127246 None:intergenic 35.0%
TTTGGATTAAGTATAGGAGG+TGG + chr1_1:62127228-62127247 None:intergenic 35.0%
GTGTTTGGATTAAGTATAGG+AGG + chr1_1:62127231-62127250 None:intergenic 35.0%
! ACCTAATGCCTTAAGGTTTT+GGG + chr1_1:62127389-62127408 None:intergenic 35.0%
! TACCTAATGCCTTAAGGTTT+TGG + chr1_1:62127390-62127409 None:intergenic 35.0%
! ACCTTAAGGCATTAGGTATA+TGG - chr1_1:62127392-62127411 Msa0034190:intron 35.0%
! CCTTAAGGCATTAGGTATAT+GGG - chr1_1:62127393-62127412 Msa0034190:intron 35.0%
AAATGTTGGATACGTAAGAG+AGG + chr1_1:62127422-62127441 None:intergenic 35.0%
GAGACAGTGAATTATGAGTA+TGG - chr1_1:62128013-62128032 Msa0034190:intron 35.0%
AGTTGTTCATAGAGAGCTTA+GGG - chr1_1:62128212-62128231 Msa0034190:CDS 35.0%
TATCAGTGATCAAAGTTCAC+CGG - chr1_1:62128312-62128331 Msa0034190:CDS 35.0%
AAGAGTTCCTTTCAAAGCTA+TGG - chr1_1:62128387-62128406 Msa0034190:CDS 35.0%
TCCTAGTAAAGTTGTTTGGT+TGG - chr1_1:62128558-62128577 Msa0034190:CDS 35.0%
TCCAACCAAACAACTTTACT+AGG + chr1_1:62128562-62128581 None:intergenic 35.0%
GTAGATTGTTCCAAGTCATT+AGG - chr1_1:62128659-62128678 Msa0034190:CDS 35.0%
TGTGATCTAGGTTCATTTCT+TGG + chr1_1:62128730-62128749 None:intergenic 35.0%
TAGACACACACTTTCATCAT+TGG + chr1_1:62128761-62128780 None:intergenic 35.0%
AGAAAAGGTTCTGTTCATCA+AGG - chr1_1:62128832-62128851 Msa0034190:intron 35.0%
CAAGGTGAAATAGAAGAAAG+TGG - chr1_1:62128850-62128869 Msa0034190:intron 35.0%
AGCAATCCTAAACCATTAAG+TGG - chr1_1:62128880-62128899 Msa0034190:intron 35.0%
ACTATTGACCAATGTGAGAA+TGG - chr1_1:62128982-62129001 Msa0034190:CDS 35.0%
! AGGAGGATTAGTAAAATCCT+TGG + chr1_1:62129043-62129062 None:intergenic 35.0%
!! TCTTGATAGGTTTGGTAATG+TGG + chr1_1:62129338-62129357 None:intergenic 35.0%
ATGCTCTTTCTTGATAGGTT+TGG + chr1_1:62129346-62129365 None:intergenic 35.0%
! ATACCAACATGGTGTCAATG+AGG + chr1_1:62123714-62123733 None:intergenic 40.0%
GTACTCTAACTCATCTAGTG+GGG - chr1_1:62124314-62124333 Msa0034190:CDS 40.0%
TACTCTAACTCATCTAGTGG+GGG - chr1_1:62124315-62124334 Msa0034190:CDS 40.0%
CAAAAACCATTCCAGTGTCA+TGG + chr1_1:62124380-62124399 None:intergenic 40.0%
! CATGACACTGGAATGGTTTT+TGG - chr1_1:62124378-62124397 Msa0034190:CDS 40.0%
! TGACACTGGAATGGTTTTTG+GGG - chr1_1:62124380-62124399 Msa0034190:CDS 40.0%
GCTAGAATCAACAGAATAGG+AGG - chr1_1:62124534-62124553 Msa0034190:CDS 40.0%
CAAGATAAGCACGAAGATCA+TGG + chr1_1:62125800-62125819 None:intergenic 40.0%
TTGGTCTCCAATTCTGAACT+TGG + chr1_1:62125897-62125916 None:intergenic 40.0%
! AATTGTGCCCAAGATTTGCT+AGG - chr1_1:62125933-62125952 Msa0034190:intron 40.0%
TTGTTAACGAGCGGCTATAA+TGG - chr1_1:62126074-62126093 Msa0034190:intron 40.0%
ACTTGACACAAGCAAGATTG+AGG - chr1_1:62126149-62126168 Msa0034190:intron 40.0%
TGATTTATCCTCTCTCCTTG+AGG - chr1_1:62126203-62126222 Msa0034190:CDS 40.0%
CTTTCTTCATTGCCATTGGA+TGG + chr1_1:62126245-62126264 None:intergenic 40.0%
CATCCAATGGCAATGAAGAA+AGG - chr1_1:62126243-62126262 Msa0034190:CDS 40.0%
ACACCTTTCTTCATTGCCAT+TGG + chr1_1:62126249-62126268 None:intergenic 40.0%
ATTCACGTGTGAAAGGTGAT+AGG - chr1_1:62126310-62126329 Msa0034190:CDS 40.0%
!! AACACTCTTGTGGTTAGTCT+TGG + chr1_1:62126445-62126464 None:intergenic 40.0%
CCATAAGACATGGATCTTGT+TGG + chr1_1:62126539-62126558 None:intergenic 40.0%
CCAACAAGATCCATGTCTTA+TGG - chr1_1:62126536-62126555 Msa0034190:CDS 40.0%
GTCTCACGTCACCTATAAAT+GGG + chr1_1:62127023-62127042 None:intergenic 40.0%
AGTCTCACGTCACCTATAAA+TGG + chr1_1:62127024-62127043 None:intergenic 40.0%
AAGTATAGGAGGTGAGAACT+CGG + chr1_1:62127084-62127103 None:intergenic 40.0%
AGGGAGAATCTTGGGTTTAT+GGG + chr1_1:62127194-62127213 None:intergenic 40.0%
AACAAGTGGTATTAGTGCCT+TGG + chr1_1:62127288-62127307 None:intergenic 40.0%
! AAGGCACTAATACCACTTGT+TGG - chr1_1:62127287-62127306 Msa0034190:CDS 40.0%
AGGCACTAATACCACTTGTT+GGG - chr1_1:62127288-62127307 Msa0034190:CDS 40.0%
CTCTTGTGGTTATGGAACAT+TGG + chr1_1:62127346-62127365 None:intergenic 40.0%
GTCTATGTCTCTTGTGGTTA+TGG + chr1_1:62127354-62127373 None:intergenic 40.0%
!!! TAATGCCTTAAGGTTTTGGG+TGG + chr1_1:62127386-62127405 None:intergenic 40.0%
! ACCCAAAACCTTAAGGCATT+AGG - chr1_1:62127385-62127404 Msa0034190:intron 40.0%
CCCATATACCTAATGCCTTA+AGG + chr1_1:62127396-62127415 None:intergenic 40.0%
GTCTCACATTGCCTATGAAT+AGG + chr1_1:62127447-62127466 None:intergenic 40.0%
!! GTTTGTGTTGGGTTTCTAGT+AGG + chr1_1:62127479-62127498 None:intergenic 40.0%
TTCTAGGTACGTTTGATGCA+TGG - chr1_1:62127908-62127927 Msa0034190:intron 40.0%
AGACATTGGTATTGTGGACA+AGG - chr1_1:62127931-62127950 Msa0034190:intron 40.0%
CACTGTCTCATTCTCACATA+AGG + chr1_1:62128002-62128021 None:intergenic 40.0%
TATGAGTATGGATCAACCTC+AGG - chr1_1:62128025-62128044 Msa0034190:CDS 40.0%
ACAATTCGTACTGCTAGTTC+TGG - chr1_1:62128079-62128098 Msa0034190:CDS 40.0%
CAGTTGTTCATAGAGAGCTT+AGG - chr1_1:62128211-62128230 Msa0034190:CDS 40.0%
GAGCTTAGGGATTAAAGTCA+AGG - chr1_1:62128225-62128244 Msa0034190:CDS 40.0%
!! CCATGATCCATAGCTTTGAA+AGG + chr1_1:62128397-62128416 None:intergenic 40.0%
CCTTTCAAAGCTATGGATCA+TGG - chr1_1:62128394-62128413 Msa0034190:CDS 40.0%
ATTAGGCTTCTTCCTGAGTT+CGG - chr1_1:62128676-62128695 Msa0034190:intron 40.0%
!! TTGGAAGGTACTTGTGATCT+AGG + chr1_1:62128742-62128761 None:intergenic 40.0%
CACACACTTTCATCATTGGA+AGG + chr1_1:62128757-62128776 None:intergenic 40.0%
! TGAAAGTGTGTGTCTAAGTG+TGG - chr1_1:62128765-62128784 Msa0034190:intron 40.0%
GTCTAAGTGTGGAACAATGT+TGG - chr1_1:62128776-62128795 Msa0034190:intron 40.0%
AAGTGTGGAACAATGTTGGA+AGG - chr1_1:62128780-62128799 Msa0034190:intron 40.0%
AGTGTGGAACAATGTTGGAA+GGG - chr1_1:62128781-62128800 Msa0034190:intron 40.0%
!! ATGGCTACTTTGAGATCTCT+TGG - chr1_1:62128952-62128971 Msa0034190:intron 40.0%
TGTTCAAGAGGGTTTAACCA+AGG - chr1_1:62129023-62129042 Msa0034190:CDS 40.0%
AACAAGGGAGATAAGAGAGA+TGG - chr1_1:62129230-62129249 Msa0034190:intron 40.0%
AGAGAGATGGAGAAACACTA+TGG - chr1_1:62129243-62129262 Msa0034190:intron 40.0%
! AACATGGTGTCAATGAGGCA+AGG + chr1_1:62123709-62123728 None:intergenic 45.0%
TTGCCTCATTGACACCATGT+TGG - chr1_1:62123708-62123727 Msa0034190:intron 45.0%
GACACCATGTTGGTATCTCA+TGG - chr1_1:62123718-62123737 Msa0034190:intron 45.0%
GTGACCATGAGATACCAACA+TGG + chr1_1:62123725-62123744 None:intergenic 45.0%
! CTTGGTGTGAACATCAGAGA+AGG + chr1_1:62123903-62123922 None:intergenic 45.0%
CTTCTCTGATGTTCACACCA+AGG - chr1_1:62123901-62123920 Msa0034190:CDS 45.0%
TAAGTAGTTCGAGATCGCGA+AGG - chr1_1:62124040-62124059 Msa0034190:CDS 45.0%
ATTCCAGTGTCATGGTTCAC+AGG + chr1_1:62124372-62124391 None:intergenic 45.0%
TGTGAACCATGACACTGGAA+TGG - chr1_1:62124371-62124390 Msa0034190:CDS 45.0%
TCTTGCAAGGATCAAGCTGT+TGG - chr1_1:62124765-62124784 Msa0034190:CDS 45.0%
GTGTTAGCTGTCCCACAAAA+TGG - chr1_1:62125555-62125574 Msa0034190:intron 45.0%
! CTTTCTCTCAGCTTGTTCTG+TGG + chr1_1:62125742-62125761 None:intergenic 45.0%
GATCTTCGTGCTTATCTTGC+AGG - chr1_1:62125801-62125820 Msa0034190:intron 45.0%
! GCTTATCTTGCAGGCCTTAT+TGG - chr1_1:62125810-62125829 Msa0034190:intron 45.0%
GGCAGGAAAAATGCAACTAG+AGG - chr1_1:62126170-62126189 Msa0034190:intron 45.0%
AACTACATCCTCAAGGAGAG+AGG + chr1_1:62126214-62126233 None:intergenic 45.0%
GGCACATAACAGTTAGAGCA+TGG - chr1_1:62126394-62126413 Msa0034190:CDS 45.0%
AGTTAGAGCATGGACTCAGA+AGG - chr1_1:62126404-62126423 Msa0034190:CDS 45.0%
GAAGTGGATGATACAGGGAA+AGG - chr1_1:62126570-62126589 Msa0034190:CDS 45.0%
GAGAATTCTGTTGGCCAAGT+AGG - chr1_1:62126645-62126664 Msa0034190:CDS 45.0%
ACTTGGGATTGTGCAGTCAT+TGG - chr1_1:62126680-62126699 Msa0034190:CDS 45.0%
ATAATGCTCCTGACTCTCCT+CGG + chr1_1:62126820-62126839 None:intergenic 45.0%
!! AGGAGAGTCAGGAGCATTAT+TGG - chr1_1:62126820-62126839 Msa0034190:intron 45.0%
!! GGAGAGTCAGGAGCATTATT+GGG - chr1_1:62126821-62126840 Msa0034190:intron 45.0%
AACAAGTGGTTGCAATGTGC+TGG + chr1_1:62127154-62127173 None:intergenic 45.0%
AGCACATTGCAACCACTTGT+TGG - chr1_1:62127153-62127172 Msa0034190:CDS 45.0%
GCACATTGCAACCACTTGTT+GGG - chr1_1:62127154-62127173 Msa0034190:CDS 45.0%
GGGAGAATCTTGGGTTTATG+GGG + chr1_1:62127193-62127212 None:intergenic 45.0%
GAGGGAGAATCTTGGGTTTA+TGG + chr1_1:62127195-62127214 None:intergenic 45.0%
CTCACTTGAGGGAGAATCTT+GGG + chr1_1:62127202-62127221 None:intergenic 45.0%
ACTCACTTGAGGGAGAATCT+TGG + chr1_1:62127203-62127222 None:intergenic 45.0%
GGAAGTGGGATTCTAGTGTT+TGG + chr1_1:62127246-62127265 None:intergenic 45.0%
ATTAGTGCCTTGGTTCAGCT+TGG + chr1_1:62127278-62127297 None:intergenic 45.0%
! GGCACTAATACCACTTGTTG+GGG - chr1_1:62127289-62127308 Msa0034190:CDS 45.0%
TGGGGAATCTGAGGAAACAT+CGG - chr1_1:62127307-62127326 Msa0034190:CDS 45.0%
TGTGGTGTCTATGTCTCTTG+TGG + chr1_1:62127360-62127379 None:intergenic 45.0%
!!! TAAGGTTTTGGGTGGAGATG+TGG + chr1_1:62127378-62127397 None:intergenic 45.0%
CATCTCCACCCAAAACCTTA+AGG - chr1_1:62127378-62127397 Msa0034190:intron 45.0%
CGTTTGATGCATGGAGACAT+TGG - chr1_1:62127917-62127936 Msa0034190:intron 45.0%
GCATGGAGACATTGGTATTG+TGG - chr1_1:62127925-62127944 Msa0034190:intron 45.0%
GGTATTGTGGACAAGGAAGT+TGG - chr1_1:62127938-62127957 Msa0034190:intron 45.0%
GACAAGGAAGTTGGCAAAAG+AGG - chr1_1:62127947-62127966 Msa0034190:intron 45.0%
!!! GGTTTGGTTTTTGTCACCTG+AGG + chr1_1:62128044-62128063 None:intergenic 45.0%
AGAATGACATGTGAAGGCTC+AGG + chr1_1:62128157-62128176 None:intergenic 45.0%
TCAAAGTTCACCGGAGTCTT+CGG - chr1_1:62128321-62128340 Msa0034190:CDS 45.0%
AGTCTTCGGAGATGAGTTCT+AGG - chr1_1:62128335-62128354 Msa0034190:CDS 45.0%
CAGGAAGAAGCCTAATGACT+TGG + chr1_1:62128672-62128691 None:intergenic 45.0%
! TTCCTGAGTTCGGTGGTAAT+TGG - chr1_1:62128686-62128705 Msa0034190:intron 45.0%
ATCCAATTACCACCGAACTC+AGG + chr1_1:62128691-62128710 None:intergenic 45.0%
CCTCTTCACCATTCTCACAT+TGG + chr1_1:62128993-62129012 None:intergenic 45.0%
CCAATGTGAGAATGGTGAAG+AGG - chr1_1:62128990-62129009 Msa0034190:CDS 45.0%
GCTGTGAGAACTGTTCAAGA+GGG - chr1_1:62129012-62129031 Msa0034190:CDS 45.0%
GGCATCTGTCCAATTCATTG+TGG + chr1_1:62129189-62129208 None:intergenic 45.0%
AATTGGACAGATGCCAGTGA+AGG - chr1_1:62129194-62129213 Msa0034190:intron 45.0%
GAAATCCATTCCAGTCTCAG+TGG + chr1_1:62129316-62129335 None:intergenic 45.0%
!!! ATTTGAATATTTTTTTTTTA+TGG + chr1_1:62125195-62125214 None:intergenic 5.0%
CCACTTTGACCACGACAGTT+CGG + chr1_1:62124020-62124039 None:intergenic 50.0%
CAGTGTCATGGTTCACAGGT+TGG + chr1_1:62124368-62124387 None:intergenic 50.0%
CAACCTGTGAACCATGACAC+TGG - chr1_1:62124366-62124385 Msa0034190:CDS 50.0%
AGAATAGGAGGGGTCTCTCT+TGG - chr1_1:62124546-62124565 Msa0034190:CDS 50.0%
ACTCGCATTGTCGATCGTCA+AGG - chr1_1:62124600-62124619 Msa0034190:CDS 50.0%
CTCGCATTGTCGATCGTCAA+GGG - chr1_1:62124601-62124620 Msa0034190:CDS 50.0%
TGAGGGAGCTGTATCTTGCA+AGG - chr1_1:62124752-62124771 Msa0034190:CDS 50.0%
GACACAAGCAAGATTGAGGC+AGG - chr1_1:62126153-62126172 Msa0034190:intron 50.0%
TCTGTTGGCCAAGTAGGAAC+TGG - chr1_1:62126651-62126670 Msa0034190:CDS 50.0%
!! TAGGAACTGGCTTGGGACTT+GGG - chr1_1:62126664-62126683 Msa0034190:CDS 50.0%
ACAATCTGTTAGAGAGCCCG+AGG - chr1_1:62126800-62126819 Msa0034190:intron 50.0%
TAATGCTCCTGACTCTCCTC+GGG + chr1_1:62126819-62126838 None:intergenic 50.0%
CTCTCTCTCTCTCTCTCTCA+TGG + chr1_1:62126861-62126880 None:intergenic 50.0%
CGGTTGAGGGAGAGATTGTT+GGG + chr1_1:62127064-62127083 None:intergenic 50.0%
TCGGTTGAGGGAGAGATTGT+TGG + chr1_1:62127065-62127084 None:intergenic 50.0%
!! GTGGTTGCAATGTGCTGGTT+CGG + chr1_1:62127149-62127168 None:intergenic 50.0%
! CATTGCAACCACTTGTTGGG+CGG - chr1_1:62127157-62127176 Msa0034190:CDS 50.0%
CTTGGTGGAAGAGTGGAAGT+GGG + chr1_1:62127260-62127279 None:intergenic 50.0%
TCTTCCACCAAGCTGAACCA+AGG - chr1_1:62127268-62127287 Msa0034190:CDS 50.0%
! ACCACTTGTTGGGGAATCTG+AGG - chr1_1:62127298-62127317 Msa0034190:CDS 50.0%
TCCTCAGATTCCCCAACAAG+TGG + chr1_1:62127302-62127321 None:intergenic 50.0%
GGGGAATCTGAGGAAACATC+GGG - chr1_1:62127308-62127327 Msa0034190:CDS 50.0%
GGGAATCTGAGGAAACATCG+GGG - chr1_1:62127309-62127328 Msa0034190:CDS 50.0%
GGAATCTGAGGAAACATCGG+GGG - chr1_1:62127310-62127329 Msa0034190:CDS 50.0%
! GAGGGGCTAACATGGAGTTT+TGG + chr1_1:62128127-62128146 None:intergenic 50.0%
GAACTCATCTCCGAAGACTC+CGG + chr1_1:62128334-62128353 None:intergenic 50.0%
GGCTGTGAGAACTGTTCAAG+AGG - chr1_1:62129011-62129030 Msa0034190:CDS 50.0%
GACAGATGCCAGTGAAGGAT+GGG - chr1_1:62129199-62129218 Msa0034190:intron 50.0%
! AGGATGGGTTTGAGGCAACA+AGG - chr1_1:62129214-62129233 Msa0034190:intron 50.0%
! GGATGGGTTTGAGGCAACAA+GGG - chr1_1:62129215-62129234 Msa0034190:intron 50.0%
CCGAACTGTCGTGGTCAAAG+TGG - chr1_1:62124017-62124036 Msa0034190:CDS 55.0%
TGGCCAAGTAGGAACTGGCT+TGG - chr1_1:62126656-62126675 Msa0034190:CDS 55.0%
! GGCCAAGTAGGAACTGGCTT+GGG - chr1_1:62126657-62126676 Msa0034190:CDS 55.0%
GTCCCAAGCCAGTTCCTACT+TGG + chr1_1:62126662-62126681 None:intergenic 55.0%
!! GTAGGAACTGGCTTGGGACT+TGG - chr1_1:62126663-62126682 Msa0034190:CDS 55.0%
GGAGGTGAGAACTCGGTTGA+GGG + chr1_1:62127077-62127096 None:intergenic 55.0%
AGGAGGTGAGAACTCGGTTG+AGG + chr1_1:62127078-62127097 None:intergenic 55.0%
CTCGGTGGAAGAGTGGAAGT+GGG + chr1_1:62127126-62127145 None:intergenic 55.0%
!! TGCAATGTGCTGGTTCGGCT+CGG + chr1_1:62127144-62127163 None:intergenic 55.0%
GGAGGTGGGAACTCACTTGA+GGG + chr1_1:62127213-62127232 None:intergenic 55.0%
AGGAGGTGGGAACTCACTTG+AGG + chr1_1:62127214-62127233 None:intergenic 55.0%
! GCTTGGTGGAAGAGTGGAAG+TGG + chr1_1:62127261-62127280 None:intergenic 55.0%
! GGTTCAGCTTGGTGGAAGAG+TGG + chr1_1:62127267-62127286 None:intergenic 55.0%
AGTGCCTTGGTTCAGCTTGG+TGG + chr1_1:62127275-62127294 None:intergenic 55.0%
TCCATGTTAGCCCCTCTCAG+AGG - chr1_1:62128131-62128150 Msa0034190:CDS 55.0%
AGGCTTCTTCCTGAGTTCGG+TGG - chr1_1:62128679-62128698 Msa0034190:intron 55.0%
GGACAGATGCCAGTGAAGGA+TGG - chr1_1:62129198-62129217 Msa0034190:intron 55.0%
! GCCAGTGAAGGATGGGTTTG+AGG - chr1_1:62129206-62129225 Msa0034190:intron 55.0%
GCCTCAAACCCATCCTTCAC+TGG + chr1_1:62129210-62129229 None:intergenic 55.0%
GACAAGCTGACCACTGAGAC+TGG - chr1_1:62129303-62129322 Msa0034190:intron 55.0%
GCTGACCACTGAGACTGGAA+TGG - chr1_1:62129308-62129327 Msa0034190:intron 55.0%
TAGAGAGCCCGAGGAGAGTC+AGG - chr1_1:62126809-62126828 Msa0034190:intron 60.0%
! GCTCGGTGGAAGAGTGGAAG+TGG + chr1_1:62127127-62127146 None:intergenic 60.0%
!! AATGTGCTGGTTCGGCTCGG+TGG + chr1_1:62127141-62127160 None:intergenic 60.0%
CCAACAGACCGCCCAACAAG+TGG + chr1_1:62127168-62127187 None:intergenic 60.0%
! CCACTTGTTGGGCGGTCTGT+TGG - chr1_1:62127165-62127184 Msa0034190:CDS 60.0%
! GCCTCTGAGAGGGGCTAACA+TGG + chr1_1:62128135-62128154 None:intergenic 60.0%
! AAGGCTCAGGCCTCTGAGAG+GGG + chr1_1:62128144-62128163 None:intergenic 60.0%
! GAAGGCTCAGGCCTCTGAGA+GGG + chr1_1:62128145-62128164 None:intergenic 60.0%
TGAAGGCTCAGGCCTCTGAG+AGG + chr1_1:62128146-62128165 None:intergenic 60.0%
!! GGTTCGGCTCGGTGGAAGAG+TGG + chr1_1:62127133-62127152 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 62123471 62129410 62123471 ID=Msa0034190;Name=Msa0034190
chr1_1 mRNA 62123471 62129410 62123471 ID=Msa0034190-mRNA-1;Parent=Msa0034190;Name=Msa0034190-mRNA-1;_AED=0.03;_eAED=0.03;_QI=0|0|0|1|1|1|7|0|1099
chr1_1 exon 62129372 62129410 62129372 ID=Msa0034190-mRNA-1:exon:19540;Parent=Msa0034190-mRNA-1
chr1_1 exon 62128959 62129195 62128959 ID=Msa0034190-mRNA-1:exon:19539;Parent=Msa0034190-mRNA-1
chr1_1 exon 62128021 62128686 62128021 ID=Msa0034190-mRNA-1:exon:19538;Parent=Msa0034190-mRNA-1
chr1_1 exon 62126927 62127332 62126927 ID=Msa0034190-mRNA-1:exon:19537;Parent=Msa0034190-mRNA-1
chr1_1 exon 62126180 62126748 62126180 ID=Msa0034190-mRNA-1:exon:19536;Parent=Msa0034190-mRNA-1
chr1_1 exon 62123792 62124967 62123792 ID=Msa0034190-mRNA-1:exon:19535;Parent=Msa0034190-mRNA-1
chr1_1 exon 62123471 62123677 62123471 ID=Msa0034190-mRNA-1:exon:19534;Parent=Msa0034190-mRNA-1
chr1_1 CDS 62129372 62129410 62129372 ID=Msa0034190-mRNA-1:cds;Parent=Msa0034190-mRNA-1
chr1_1 CDS 62128959 62129195 62128959 ID=Msa0034190-mRNA-1:cds;Parent=Msa0034190-mRNA-1
chr1_1 CDS 62128021 62128686 62128021 ID=Msa0034190-mRNA-1:cds;Parent=Msa0034190-mRNA-1
chr1_1 CDS 62126927 62127332 62126927 ID=Msa0034190-mRNA-1:cds;Parent=Msa0034190-mRNA-1
chr1_1 CDS 62126180 62126748 62126180 ID=Msa0034190-mRNA-1:cds;Parent=Msa0034190-mRNA-1
chr1_1 CDS 62123792 62124967 62123792 ID=Msa0034190-mRNA-1:cds;Parent=Msa0034190-mRNA-1
chr1_1 CDS 62123471 62123677 62123471 ID=Msa0034190-mRNA-1:cds;Parent=Msa0034190-mRNA-1
Gene Sequence

>Msa0034190

ATGGCATTACTTCGACCTTCATCTTTCATGATCTTGCTGGCATATGGTGCACTAATAGTCCTTGCCTCATTGACACCATGTTGGTATCTCATGGTCACACATATTGAGAAAAGTGTGAATTTGCACTCAGCAAATATTGTGTCACAATTGCAATCAGAAATTGAGTACTCAGCTGAACTATTGCAACCAATGAAATCATCATCAACAAATTTATCTACATTATTGAGCTCAACCCTTAATTCTACTAATGTCACCTTCTCTGATGTTCACACCAAGGTGGCTCCGTTATTATTTCAAGCATTGAAGACAATTCCTCACTTGACACAAATCTCATACATAGGAATGGAAGGTCTTTTTTTCACACACTACAATGATGGTGATCAAGTTCTAGCAATGTACTCTAACTCATCTAGTGGGGGTGCTTCAAACAAAACCATATACTATATCCAACCTGTGAACCATGACACTGGAATGGTTTTTGGGGAAGCCATAATATCTAACAACACTATCAATATTGATGCAAGTTGGATAAATGGAACAAATAATATTTCACATGAATTTGCATCATTGGGAACAAAGTTGAATAATGTTAGTGATCTTTTGTTCATGAATTCAGCTAGAATCAACAGAATAGGAGGGGTCTCTCTTGGATTTTCGACGAAAGCAATAACCGATTATATCACTCGCATTGTCGATCGTCAAGGGACAAAATCATATTTGGCTACCAAAGATGGAAAAGTTATTGTAAAAGGAATTCAAAATATCCGTTTGATGATTTTTAATGATAGTGTTTCAATTCAAGCTGTTAATGGTAATGGAGATCTAATAAGGAATGAGGGAGCTGTATCTTGCAAGGATCAAGCTGTTGGTTCTAGTTTGAATATTCATGATACTCAATATTTGATTCATTGCTACCCCATTGATATTATGGGAATAGAATCGGTGCATGTGTTAGCTGTCCCACAAAATGGATCTCTCATCTTTAATCCAAGTCATAAAGAAAAGGGATTGACACTCTTGATTGTAATGATGATGATGATATTTATTGCTATCTTGAGTTTTCTATTCTTGAATGTTGGAGTGACAAAGAGAGAAATGCATTTGTGTGCATCACTCATACAACAAAAAGAAGCCACAGAACAAGCTGAGAGAAAGAATACCAATAAGAGTCTTGCTTTTGCTACTGCTAGCCATGATCTTCGTGCTTATCTTGCAGGCCTTATTGGTTTGATTGAAATGTCCTCTAAATTAGTTGTTACTAATTCAAAATTGGACACCAATTTGAAACCAAGTTCAGAATTGGAGACCAACTTAAAACAAATGGATAATTGTGCCCAAGATTTGCTAGGACTGTTGAATTCTATACTTGACACAAGCAAGATTGAGGCAGGAAAAATGCAACTAGAGGAAGAGGAATTTGATTTATCCTCTCTCCTTGAGGATGTAGTTGATTTGTACCATCCAATGGCAATGAAGAAAGGTGTAGAAGTTGTATTGGACTCTTGTAATGGCTCAGTGATCAAACATTCACGTGTGAAAGGTGATAGGAGAAAATTGAAGCAAGTTTTGTGTAACTTGCTTAGCAATGCTGTTAAATTTACTGATGAAGGGCACATAACAGTTAGAGCATGGACTCAGAAGGCCAAATTGCAAAAATCCAAGACTAACCACAAGAGTGTTGTGAAATCTTTGTCTTGGTTGTTTAATAAGAAAGACAAAGAATGTGAAGACATAGAAGCTGTGAATTTAGCCCAACAAGATCCATGTCTTATGGATTTTGTATTTGAAGTGGATGATACAGGGAAAGGTATTCCTAAAGAGAATCACAAGTCAGTGTTTGAGAATTATGTTCAAGTTAAAGAGAATTCTGTTGGCCAAGTAGGAACTGGCTTGGGACTTGGGATTGTGCAGTCATTGGTACGTTTGATGCATGGAGACATTGGTATTGTGGACAAGGAAGTTGGCAAAAGAGGAACATGCTTCAAGTTCAATGTGCTTCTCACCTTATGTGAGAATGAGACAGTGAATTATGAGTATGGATCAACCTCAGGTGACAAAAACCAAACCCTAGAGAAAAAATTAACAATTCGTACTGCTAGTTCTGGTTCAAGCATTTGTTCTTTGAGTCCAAAACTCCATGTTAGCCCCTCTCAGAGGCCTGAGCCTTCACATGTCATTCTTTACATTACTGATGAGGAAAGAAGAAGAACTTCGCAGTTGTTCATAGAGAGCTTAGGGATTAAAGTCAAGGTTGTGAAGAGTAGAAATCATCTAATTCATACTCTCAAGAAGATCAAAAAAGAAAAGGGTGACGATATCAGTGATCAAAGTTCACCGGAGTCTTCGGAGATGAGTTCTAGGTGTACATCTTATAACTCTTCTTGTAGTAGAAGAGTTCCTTTCAAAGCTATGGATCATGGAAATGAATATCTATCTTCAATGTTCAAGAAGAAAAACAATGGAGCTGCACCAAGTTTTGTTTTGATTATCATTGATGCAAATGCAGGACCATTTTCTAAGCTTTGTAAGATTGTGTCAAACTTCAAGAAAGATCTTCTCAATCCTAGTAAAGTTGTTTGGTTGGAAAAGCCTTTTGAGAGTAGTGTTGATTACCAAGCAATTGATCAAGATGATATTGTGATATCAAAACCATTTCATGGTAGTAGATTGTTCCAAGTCATTAGGCTTCTTCCTGAGTTCGGTGGTAATTGGATAAGCAATTCTAGTAAACCAAGAAATGAACCTAGATCACAAGTACCTTCCAATGATGAAAGTGTGTGTCTAAGTGTGGAACAATGTTGGAAGGGAACACAAAAGTCCTATGTTAATCTGGGAAGAAAAGGTTCTGTTCATCAAGGTGAAATAGAAGAAAGTGGAGAATCAAGCAATCCTAAACCATTAAGTGGAAAGAAGTTTTTGGTTGTTGATGATAGTCCTATGCTGAGAAAGATTTGTATGGCTACTTTGAGATCTCTTGGTGTGACTACTATTGACCAATGTGAGAATGGTGAAGAGGCTGTGAGAACTGTTCAAGAGGGTTTAACCAAGGATTTTACTAATCCTCCTTATGATTATATCTTAATGGATTGTCAGATGCCAGTGAAGGATGGGTTTGAGGCAACAAGGGAGATAAGAGAGATGGAGAAACACTATGGTCTTCACATTTCTATCATTGCATTATCTGCTGAAATTGACAAGCTGACCACTGAGACTGGAATGGATTTCCACATTACCAAACCTATCAAGAAAGAGCATTTACTCAAAGCTATTGCGTACATAGAAAATAGTGACATAATGTAA
Protein sequence

>Msa0034190

MALLRPSSFMILLAYGALIVLASLTPCWYLMVTHIEKSVNLHSANIVSQLQSEIEYSAELLQPMKSSSTNLSTLLSSTLNSTNVTFSDVHTKVAPLLFQALKTIPHLTQISYIGMEGLFFTHYNDGDQVLAMYSNSSSGGASNKTIYYIQPVNHDTGMVFGEAIISNNTINIDASWINGTNNISHEFASLGTKLNNVSDLLFMNSARINRIGGVSLGFSTKAITDYITRIVDRQGTKSYLATKDGKVIVKGIQNIRLMIFNDSVSIQAVNGNGDLIRNEGAVSCKDQAVGSSLNIHDTQYLIHCYPIDIMGIESVHVLAVPQNGSLIFNPSHKEKGLTLLIVMMMMIFIAILSFLFLNVGVTKREMHLCASLIQQKEATEQAERKNTNKSLAFATASHDLRAYLAGLIGLIEMSSKLVVTNSKLDTNLKPSSELETNLKQMDNCAQDLLGLLNSILDTSKIEAGKMQLEEEEFDLSSLLEDVVDLYHPMAMKKGVEVVLDSCNGSVIKHSRVKGDRRKLKQVLCNLLSNAVKFTDEGHITVRAWTQKAKLQKSKTNHKSVVKSLSWLFNKKDKECEDIEAVNLAQQDPCLMDFVFEVDDTGKGIPKENHKSVFENYVQVKENSVGQVGTGLGLGIVQSLVRLMHGDIGIVDKEVGKRGTCFKFNVLLTLCENETVNYEYGSTSGDKNQTLEKKLTIRTASSGSSICSLSPKLHVSPSQRPEPSHVILYITDEERRRTSQLFIESLGIKVKVVKSRNHLIHTLKKIKKEKGDDISDQSSPESSEMSSRCTSYNSSCSRRVPFKAMDHGNEYLSSMFKKKNNGAAPSFVLIIIDANAGPFSKLCKIVSNFKKDLLNPSKVVWLEKPFESSVDYQAIDQDDIVISKPFHGSRLFQVIRLLPEFGGNWISNSSKPRNEPRSQVPSNDESVCLSVEQCWKGTQKSYVNLGRKGSVHQGEIEESGESSNPKPLSGKKFLVVDDSPMLRKICMATLRSLGVTTIDQCENGEEAVRTVQEGLTKDFTNPPYDYILMDCQMPVKDGFEATREIREMEKHYGLHISIIALSAEIDKLTTETGMDFHITKPIKKEHLLKAIAYIENSDIM*