Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0038710 | sp|Q9SWG3|FAR1_ARATH | 24.128 | 344 | 197 | 8 | 228 | 570 | 398 | 678 | 8.32e-22 | 103 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|---|---|
| Msa0038710 | TF | FAR1 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0038710 | MtrunA17_Chr3g0088371 | 85.496 | 131 | 19 | 0 | 447 | 577 | 1 | 131 | 2.56e-75 | 239 |
| Msa0038710 | MtrunA17_Chr1g0172971 | 79.487 | 117 | 23 | 1 | 1 | 116 | 1 | 117 | 1.79e-53 | 192 |
| Msa0038710 | MtrunA17_Chr4g0035531 | 95.775 | 71 | 3 | 0 | 576 | 646 | 66 | 136 | 2.48e-38 | 140 |
| Msa0038710 | MtrunA17_Chr3g0082121 | 28.916 | 332 | 177 | 10 | 227 | 556 | 381 | 655 | 2.65e-28 | 120 |
| Msa0038710 | MtrunA17_Chr2g0324011 | 24.719 | 267 | 150 | 7 | 228 | 494 | 356 | 571 | 7.32e-20 | 94.0 |
| Msa0038710 | MtrunA17_Chr1g0202341 | 26.761 | 284 | 151 | 11 | 210 | 491 | 381 | 609 | 1.68e-19 | 92.8 |
| Msa0038710 | MtrunA17_Chr1g0202341 | 30.208 | 192 | 110 | 6 | 34 | 223 | 50 | 219 | 2.62e-13 | 73.2 |
| Msa0038710 | MtrunA17_Chr6g0475591 | 88.095 | 42 | 5 | 0 | 188 | 229 | 1 | 42 | 4.88e-19 | 82.0 |
| Msa0038710 | MtrunA17_Chr2g0296781 | 25.364 | 343 | 195 | 15 | 205 | 537 | 311 | 602 | 8.35e-18 | 87.8 |
| Msa0038710 | MtrunA17_Chr6g0477261 | 25.000 | 332 | 192 | 14 | 205 | 528 | 200 | 482 | 8.83e-18 | 87.4 |
| Msa0038710 | MtrunA17_Chr1g0207551 | 23.229 | 353 | 200 | 12 | 203 | 547 | 352 | 641 | 7.11e-17 | 84.7 |
| Msa0038710 | MtrunA17_Chr3g0118611 | 25.168 | 298 | 169 | 9 | 253 | 548 | 312 | 557 | 8.52e-17 | 84.3 |
| Msa0038710 | MtrunA17_Chr1g0203721 | 22.817 | 355 | 207 | 11 | 227 | 568 | 411 | 711 | 3.63e-16 | 82.8 |
| Msa0038710 | MtrunA17_Chr3g0080351 | 23.864 | 352 | 196 | 12 | 230 | 577 | 414 | 697 | 2.93e-15 | 79.7 |
| Msa0038710 | MtrunA17_Chr7g0258861 | 27.128 | 188 | 118 | 4 | 41 | 228 | 16 | 184 | 1.05e-13 | 72.4 |
| Msa0038710 | MtrunA17_Chr2g0329031 | 24.370 | 238 | 131 | 7 | 250 | 487 | 369 | 557 | 3.26e-12 | 69.7 |
| Msa0038710 | MtrunA17_Chr1g0196541 | 23.404 | 282 | 168 | 10 | 213 | 491 | 320 | 556 | 1.30e-11 | 67.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0038710 | AT4G15090.1 | 24.128 | 344 | 197 | 8 | 228 | 570 | 398 | 678 | 8.46e-23 | 103 |
| Msa0038710 | AT4G15090.5 | 24.128 | 344 | 197 | 8 | 228 | 570 | 398 | 678 | 8.46e-23 | 103 |
| Msa0038710 | AT4G15090.3 | 24.128 | 344 | 197 | 8 | 228 | 570 | 398 | 678 | 8.46e-23 | 103 |
| Msa0038710 | AT4G15090.2 | 24.128 | 344 | 197 | 8 | 228 | 570 | 398 | 678 | 8.46e-23 | 103 |
| Msa0038710 | AT4G15090.4 | 24.128 | 344 | 197 | 8 | 228 | 570 | 398 | 678 | 8.46e-23 | 103 |
| Msa0038710 | AT3G15750.3 | 56.338 | 71 | 31 | 0 | 576 | 646 | 11 | 81 | 6.50e-21 | 90.1 |
| Msa0038710 | AT3G15750.2 | 55.556 | 72 | 32 | 0 | 575 | 646 | 44 | 115 | 8.34e-21 | 90.9 |
| Msa0038710 | AT3G15750.1 | 55.556 | 72 | 32 | 0 | 575 | 646 | 57 | 128 | 1.29e-20 | 90.9 |
| Msa0038710 | AT1G34570.1 | 52.778 | 72 | 34 | 0 | 575 | 646 | 66 | 137 | 4.29e-19 | 86.7 |
| Msa0038710 | AT3G22170.2 | 22.874 | 341 | 192 | 9 | 250 | 587 | 425 | 697 | 1.55e-17 | 87.4 |
| Msa0038710 | AT3G22170.1 | 22.874 | 341 | 192 | 9 | 250 | 587 | 425 | 697 | 1.55e-17 | 87.4 |
| Msa0038710 | AT4G19990.1 | 35.338 | 133 | 72 | 3 | 420 | 550 | 438 | 558 | 1.35e-12 | 71.2 |
| Msa0038710 | AT4G19990.6 | 35.338 | 133 | 72 | 3 | 420 | 550 | 495 | 615 | 1.48e-12 | 71.2 |
| Msa0038710 | AT4G19990.2 | 35.338 | 133 | 72 | 3 | 420 | 550 | 495 | 615 | 1.48e-12 | 71.2 |
| Msa0038710 | AT4G19990.3 | 35.338 | 133 | 72 | 3 | 420 | 550 | 495 | 615 | 1.48e-12 | 71.2 |
| Msa0038710 | AT4G19990.4 | 35.338 | 133 | 72 | 3 | 420 | 550 | 495 | 615 | 1.48e-12 | 71.2 |
| Msa0038710 | AT4G19990.7 | 35.338 | 133 | 72 | 3 | 420 | 550 | 509 | 629 | 1.52e-12 | 71.2 |
| Msa0038710 | AT4G19990.5 | 35.338 | 133 | 72 | 3 | 420 | 550 | 495 | 615 | 1.61e-12 | 71.2 |
Find 120 sgRNAs with CRISPR-Local
Find 381 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTTAGTCATTTCAACATTA+TGG | 0.194287 | 1_1:+68213369 | Msa0038710:CDS |
| CAAGAAGCCCTTACTATTCT+AGG | 0.241094 | 1_1:-68215420 | None:intergenic |
| TGTCGACAACAGATGCTCTT+AGG | 0.300308 | 1_1:+68215172 | Msa0038710:three_prime_UTR |
| GCACAAGAGGGATTCAATAT+TGG | 0.307988 | 1_1:+68214877 | Msa0038710:CDS |
| AATCAGATTTCGACTACAAT+TGG | 0.318540 | 1_1:+68213143 | Msa0038710:CDS |
| TGTTCTTGAGGCAGGGAAAA+AGG | 0.322946 | 1_1:+68214083 | Msa0038710:CDS |
| CAAGGTATCATCATCTATTT+CGG | 0.327304 | 1_1:-68215375 | None:intergenic |
| ATCATCATCTATTTCGGTTC+AGG | 0.329121 | 1_1:-68215369 | None:intergenic |
| CAGTCCGTGCTGGTTATAGC+TGG | 0.342284 | 1_1:+68214911 | Msa0038710:CDS |
| GAGGGATAATCATGCTGATT+TGG | 0.346844 | 1_1:+68213402 | Msa0038710:CDS |
| CTGCGACACAATAAGCTTGC+AGG | 0.349495 | 1_1:+68215257 | Msa0038710:three_prime_UTR |
| GGTTTCGAATGTTGATGTTT+TGG | 0.354913 | 1_1:+68213666 | Msa0038710:CDS |
| CTCAACGGTGTTCTTGAGGC+AGG | 0.386173 | 1_1:+68214075 | Msa0038710:CDS |
| TCATGCTGATTTGGACTTCA+AGG | 0.389304 | 1_1:+68213411 | Msa0038710:CDS |
| TTCTCATACTCAACAAGAAC+TGG | 0.395633 | 1_1:-68209381 | None:intergenic |
| TTCCTTCAAATACTATTATG+AGG | 0.399583 | 1_1:+68213543 | Msa0038710:CDS |
| GAGGAGTTTCTTCTTTCTAA+AGG | 0.401366 | 1_1:+68214108 | Msa0038710:CDS |
| GGACCGCATAAGCTGACTAT+TGG | 0.410008 | 1_1:-68213464 | None:intergenic |
| CATGTCGTATGTTTGAGAAC+CGG | 0.411671 | 1_1:+68213791 | Msa0038710:CDS |
| GATTATGATCTTCAAACCTT+GGG | 0.413114 | 1_1:-68213714 | None:intergenic |
| GAAAAGAGAAATGAATTTCA+AGG | 0.416863 | 1_1:+68215126 | Msa0038710:CDS |
| ATAACACTGGATTCTCTGTT+AGG | 0.417808 | 1_1:+68209223 | Msa0038710:CDS |
| GGGTTGTCACAGTCGACATT+AGG | 0.419786 | 1_1:+68213749 | Msa0038710:CDS |
| TAAAGAATCATGGAGGTCTT+TGG | 0.421610 | 1_1:+68209152 | Msa0038710:CDS |
| GGTAAATGACTGTCAATTGC+AGG | 0.425602 | 1_1:-68215348 | None:intergenic |
| CGATTATGATCTTCAAACCT+TGG | 0.425681 | 1_1:-68213715 | None:intergenic |
| CGAGAAGTAAATGAAGTTCA+AGG | 0.430014 | 1_1:+68209558 | Msa0038710:CDS |
| CACTTTAGCCTAGAATAGTA+AGG | 0.431176 | 1_1:+68215412 | Msa0038710:three_prime_UTR |
| GTCTTTAGTGCCGACATTCA+TGG | 0.432978 | 1_1:-68213959 | None:intergenic |
| AGCTGGAATATATTTGAAGT+TGG | 0.433136 | 1_1:+68209440 | Msa0038710:CDS |
| GACCGCATAAGCTGACTATT+GGG | 0.435741 | 1_1:-68213463 | None:intergenic |
| CCATGATTCTTTATCACTAA+AGG | 0.442634 | 1_1:-68209142 | None:intergenic |
| TACACGTGTTTGCGCAGATC+CGG | 0.442827 | 1_1:+68214035 | Msa0038710:CDS |
| TGAATGTCTATAAGATATAT+AGG | 0.445219 | 1_1:+68209472 | Msa0038710:CDS |
| GAAAGGGTTGGTTGTAAAGC+TGG | 0.447509 | 1_1:+68209423 | Msa0038710:CDS |
| CGCTTTAAAACATATTGTGC+AGG | 0.447633 | 1_1:-68213892 | None:intergenic |
| CGTTATGCTTGTAACAAAGA+AGG | 0.449439 | 1_1:+68209306 | Msa0038710:CDS |
| GCTTTAATAAATTCTAAAGC+TGG | 0.450264 | 1_1:+68209588 | Msa0038710:CDS |
| TATGCATTGGTCTTCAGCTT+GGG | 0.450920 | 1_1:+68213243 | Msa0038710:CDS |
| ATCTGAGAGTGGACAATTGA+CGG | 0.452529 | 1_1:+68209077 | Msa0038710:CDS |
| GGCCTACTTCGGACTTTAAG+TGG | 0.458978 | 1_1:+68213197 | Msa0038710:CDS |
| CTCAAGTAGCGCAAATGCTC+TGG | 0.460440 | 1_1:-68209528 | None:intergenic |
| ATGTCGTATGTTTGAGAACC+GGG | 0.461344 | 1_1:+68213792 | Msa0038710:CDS |
| ACAAAATAAGAAATCGGATA+AGG | 0.469178 | 1_1:+68209272 | Msa0038710:CDS |
| TCTCCTCTGATAAAGTATCA+TGG | 0.477326 | 1_1:+68215297 | Msa0038710:three_prime_UTR |
| AGATCAGTTAAAAGAGAAGT+TGG | 0.478165 | 1_1:+68215092 | Msa0038710:CDS |
| GTATGCATTGGTCTTCAGCT+TGG | 0.479582 | 1_1:+68213242 | Msa0038710:CDS |
| GAAGTGATGGGTCAAGGAGT+TGG | 0.484292 | 1_1:+68209633 | Msa0038710:CDS |
| CTCCTCATAATAGTATTTGA+AGG | 0.485089 | 1_1:-68213545 | None:intergenic |
| TTACAACCAACCCTTTCCTC+TGG | 0.485330 | 1_1:-68209417 | None:intergenic |
| TTTAATTATGCATATAACAC+TGG | 0.485542 | 1_1:+68209210 | Msa0038710:CDS |
| TCTAATGACAACTCGTCAAA+AGG | 0.488137 | 1_1:+68209701 | Msa0038710:CDS |
| CAATTCACAAAATAAGAAAT+CGG | 0.490263 | 1_1:+68209266 | Msa0038710:CDS |
| TATGAGGAGGACACAACAAA+AGG | 0.490908 | 1_1:+68213559 | Msa0038710:CDS |
| ATCAGATTTCGACTACAATT+GGG | 0.491708 | 1_1:+68213144 | Msa0038710:CDS |
| CGTCAAAAGGAGATGGTGGC+TGG | 0.492100 | 1_1:+68209714 | Msa0038710:CDS |
| ACATTATGGTTCAGAGAATG+AGG | 0.494022 | 1_1:+68213383 | Msa0038710:CDS |
| AGAAATATTTCAGATGCCTC+CGG | 0.497902 | 1_1:-68214054 | None:intergenic |
| AGTCCGTGCTGGTTATAGCT+GGG | 0.498770 | 1_1:+68214912 | Msa0038710:CDS |
| GAGAACATCTTATGAAGTGA+TGG | 0.499875 | 1_1:+68209620 | Msa0038710:CDS |
| ATTGGTCTTCAGCTTGGGTG+AGG | 0.501327 | 1_1:+68213248 | Msa0038710:CDS |
| CTCATTCAAATCGTATGCAT+TGG | 0.507227 | 1_1:+68213230 | Msa0038710:CDS |
| ATCATAATCGACTTGATGAA+AGG | 0.507955 | 1_1:+68213728 | Msa0038710:CDS |
| TTTAAGTCCGAAAATCGAAA+AGG | 0.508080 | 1_1:-68209672 | None:intergenic |
| CTCCTCTGATAAAGTATCAT+GGG | 0.514204 | 1_1:+68215298 | Msa0038710:three_prime_UTR |
| GTGTTGTAAGAGGTGCATCC+AGG | 0.517186 | 1_1:+68214935 | Msa0038710:CDS |
| GATCTTCAAACCTTGGGGAA+AGG | 0.519004 | 1_1:-68213708 | None:intergenic |
| TAAAGAATCGAACAAGTGAA+TGG | 0.519618 | 1_1:-68213351 | None:intergenic |
| TGTCTATAAGATATATAGGT+GGG | 0.523740 | 1_1:+68209476 | Msa0038710:CDS |
| TCATAATCGACTTGATGAAA+GGG | 0.526860 | 1_1:+68213729 | Msa0038710:CDS |
| AGAAGGTCTTATAGCAGCAA+AGG | 0.527678 | 1_1:+68214846 | Msa0038710:CDS |
| CATAATAGTATTTGAAGGAA+AGG | 0.529686 | 1_1:-68213540 | None:intergenic |
| TTTAAACAATCAGTCCGTGC+TGG | 0.530482 | 1_1:+68214901 | Msa0038710:CDS |
| CCTTTAGTGATAAAGAATCA+TGG | 0.533415 | 1_1:+68209142 | Msa0038710:CDS |
| TAACAAAGAAGGTTTCAAGA+AGG | 0.538422 | 1_1:+68209317 | Msa0038710:CDS |
| ATGAGGAGGACACAACAAAA+GGG | 0.542065 | 1_1:+68213560 | Msa0038710:CDS |
| AACAAAGAAGGTTTCAAGAA+GGG | 0.545537 | 1_1:+68209318 | Msa0038710:CDS |
| AAATGCTCTGGTTTATGTAA+TGG | 0.552634 | 1_1:-68209516 | None:intergenic |
| AAAGGAAGCTTCTGCACAAG+AGG | 0.556267 | 1_1:+68214864 | Msa0038710:CDS |
| TATAGCTGGGGTGTTGTAAG+AGG | 0.565319 | 1_1:+68214925 | Msa0038710:CDS |
| TGAAAATTTAGTTATTGATG+CGG | 0.565546 | 1_1:+68209101 | Msa0038710:CDS |
| GTGATGGGTCAAGGAGTTGG+AGG | 0.568802 | 1_1:+68209636 | Msa0038710:CDS |
| AAAAGAGAAATGAATTTCAA+GGG | 0.580814 | 1_1:+68215127 | Msa0038710:CDS |
| TTGAAGAAAACCTTTCCCCA+AGG | 0.580876 | 1_1:+68213698 | Msa0038710:CDS |
| TGGTGTATACTTGTTTACTA+CGG | 0.585960 | 1_1:-68213485 | None:intergenic |
| TCTTATGAAGTGATGGGTCA+AGG | 0.589029 | 1_1:+68209627 | Msa0038710:CDS |
| ACTTTAGCCTAGAATAGTAA+GGG | 0.589210 | 1_1:+68215413 | Msa0038710:three_prime_UTR |
| TCAACGGTGTTCTTGAGGCA+GGG | 0.590097 | 1_1:+68214076 | Msa0038710:CDS |
| ATTTCTCAACGGTGTTCTTG+AGG | 0.591378 | 1_1:+68214071 | Msa0038710:CDS |
| GTCCGTGCTGGTTATAGCTG+GGG | 0.598944 | 1_1:+68214913 | Msa0038710:CDS |
| GACAACTCGTCAAAAGGAGA+TGG | 0.599038 | 1_1:+68209707 | Msa0038710:CDS |
| TGCCCATGATACTTTATCAG+AGG | 0.599383 | 1_1:-68215300 | None:intergenic |
| TTGATATCGTTGTGCTTGAG+TGG | 0.601464 | 1_1:-68213983 | None:intergenic |
| AGAACATCTTATGAAGTGAT+GGG | 0.601988 | 1_1:+68209621 | Msa0038710:CDS |
| AACTCGTCAAAAGGAGATGG+TGG | 0.603142 | 1_1:+68209710 | Msa0038710:CDS |
| CTTCAAATACTATTATGAGG+AGG | 0.607664 | 1_1:+68213546 | Msa0038710:CDS |
| CTGAAATCTACCATGAATGT+CGG | 0.609627 | 1_1:+68213949 | Msa0038710:CDS |
| CTTTAGAGTGGGTATCGAGA+AGG | 0.610472 | 1_1:+68214829 | Msa0038710:intron |
| ATATCAACTTCATCTGAGAG+TGG | 0.614980 | 1_1:+68209066 | Msa0038710:CDS |
| AGAACTGGACTGTCACATGT+TGG | 0.620791 | 1_1:-68209366 | None:intergenic |
| AGCCACTTAAAGTCCGAAGT+AGG | 0.621799 | 1_1:-68213199 | None:intergenic |
| GGGTCAAGGAGTTGGAGGCA+CGG | 0.621882 | 1_1:+68209641 | Msa0038710:CDS |
| ACGTGTTTGCGCAGATCCGG+AGG | 0.624069 | 1_1:+68214038 | Msa0038710:CDS |
| AGTGTATTACATACAATACA+AGG | 0.624842 | 1_1:-68215393 | None:intergenic |
| ATCCCAATAGTCAGCTTATG+CGG | 0.628481 | 1_1:+68213461 | Msa0038710:CDS |
| ATTATGATCTTCAAACCTTG+GGG | 0.630358 | 1_1:-68213713 | None:intergenic |
| AAGGAAGCTTCTGCACAAGA+GGG | 0.633999 | 1_1:+68214865 | Msa0038710:CDS |
| AGAATAGTAAGGGCTTCTTG+TGG | 0.642124 | 1_1:+68215423 | Msa0038710:three_prime_UTR |
| CATTATGGTTCAGAGAATGA+GGG | 0.643278 | 1_1:+68213384 | Msa0038710:CDS |
| ATGTCTATAAGATATATAGG+TGG | 0.643489 | 1_1:+68209475 | Msa0038710:CDS |
| GATTTCAGCTTATCGACAGA+CGG | 0.644926 | 1_1:-68213934 | None:intergenic |
| TGAATAAATGAAAAGCAAGA+TGG | 0.655697 | 1_1:-68213505 | None:intergenic |
| CACCCCAGCTATAACCAGCA+CGG | 0.660587 | 1_1:-68214915 | None:intergenic |
| GCATCTGAAATATTTCTCAA+CGG | 0.661104 | 1_1:+68214060 | Msa0038710:CDS |
| CATGTCGACATAAGAAACCC+CGG | 0.663279 | 1_1:-68213810 | None:intergenic |
| TGTCGTATGTTTGAGAACCG+GGG | 0.673760 | 1_1:+68213793 | Msa0038710:CDS |
| ATGTTGATAATGATAATGAG+AGG | 0.683310 | 1_1:+68213644 | Msa0038710:CDS |
| TGTTGATAATGATAATGAGA+GGG | 0.689129 | 1_1:+68213645 | Msa0038710:CDS |
| TTTGAAACAAAATGAGCACG+GGG | 0.716872 | 1_1:+68215227 | Msa0038710:three_prime_UTR |
| TTAGTGATAAAGAATCATGG+AGG | 0.769153 | 1_1:+68209145 | Msa0038710:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATATATGTTTTTAATGAAA+CGG | - | chr1_1:68209836-68209855 | None:intergenic | 10.0% |
| !! | AAAAATTCATAACTAAAATA+AGG | - | chr1_1:68214765-68214784 | None:intergenic | 10.0% |
| !!! | TATTTTCTTTTTCATTTTTT+TGG | + | chr1_1:68215040-68215059 | Msa0038710:intron | 10.0% |
| !!! | TGTTAAAGTGTTTTATAAAA+TGG | + | chr1_1:68210562-68210581 | Msa0038710:intron | 15.0% |
| !!! | GTTAAAGTGTTTTATAAAAT+GGG | + | chr1_1:68210563-68210582 | Msa0038710:intron | 15.0% |
| !!! | TTAAAGTGTTTTATAAAATG+GGG | + | chr1_1:68210564-68210583 | Msa0038710:intron | 15.0% |
| !!! | AGAATTTGTTTTGAAAATTA+TGG | + | chr1_1:68211085-68211104 | Msa0038710:intron | 15.0% |
| !!! | GTATAAAACATTTTCAATTA+GGG | - | chr1_1:68211229-68211248 | None:intergenic | 15.0% |
| !!! | AGTATAAAACATTTTCAATT+AGG | - | chr1_1:68211230-68211249 | None:intergenic | 15.0% |
| !! | TTTAGTGAAAATAATCAAAT+GGG | - | chr1_1:68211363-68211382 | None:intergenic | 15.0% |
| !!! | TTTTAGTGAAAATAATCAAA+TGG | - | chr1_1:68211364-68211383 | None:intergenic | 15.0% |
| !!! | TTGATTATTTTCACTAAAAT+TGG | + | chr1_1:68211365-68211384 | Msa0038710:intron | 15.0% |
| !!! | TTCTTTAAAGTTGATTATTT+TGG | + | chr1_1:68211402-68211421 | Msa0038710:intron | 15.0% |
| !!! | TTTTGATCATTTTCATTAAA+TGG | + | chr1_1:68211471-68211490 | Msa0038710:intron | 15.0% |
| !! | TAAAATGAACTAAATTACTA+GGG | - | chr1_1:68211773-68211792 | None:intergenic | 15.0% |
| !! | ATAAAATGAACTAAATTACT+AGG | - | chr1_1:68211774-68211793 | None:intergenic | 15.0% |
| !! | TGAAAATTTAGTTATTGATG+CGG | + | chr1_1:68209101-68209120 | Msa0038710:CDS | 20.0% |
| !! | TTTAATTATGCATATAACAC+TGG | + | chr1_1:68209210-68209229 | Msa0038710:CDS | 20.0% |
| !! | CAATTCACAAAATAAGAAAT+CGG | + | chr1_1:68209266-68209285 | Msa0038710:CDS | 20.0% |
| !! | TGAATGTCTATAAGATATAT+AGG | + | chr1_1:68209472-68209491 | Msa0038710:CDS | 20.0% |
| !!! | TTTTACTACGAATTTTCTTA+AGG | + | chr1_1:68209792-68209811 | Msa0038710:intron | 20.0% |
| !!! | TTTACTACGAATTTTCTTAA+GGG | + | chr1_1:68209793-68209812 | Msa0038710:intron | 20.0% |
| !! | AATAGAATAAATAAAAGCTG+AGG | + | chr1_1:68209929-68209948 | Msa0038710:intron | 20.0% |
| !! | TTAGATTATAATCTTACCAA+TGG | - | chr1_1:68210112-68210131 | None:intergenic | 20.0% |
| !!! | AGGTTGTTAGATATTAATTT+TGG | + | chr1_1:68210300-68210319 | Msa0038710:intron | 20.0% |
| !! | ATATGTATTAGAGGATTTAA+TGG | + | chr1_1:68210333-68210352 | Msa0038710:intron | 20.0% |
| !! | AATGGTTTCTATTGATATTA+AGG | + | chr1_1:68210351-68210370 | Msa0038710:intron | 20.0% |
| !! | AAACTATTTATTCTCAGATA+TGG | + | chr1_1:68210404-68210423 | Msa0038710:intron | 20.0% |
| !! | AACTATTTATTCTCAGATAT+GGG | + | chr1_1:68210405-68210424 | Msa0038710:intron | 20.0% |
| !! | TAAAGTCATCGATATTATTA+TGG | + | chr1_1:68210630-68210649 | Msa0038710:intron | 20.0% |
| !! | ATATTATTATGGTCTCTATT+TGG | + | chr1_1:68210641-68210660 | Msa0038710:intron | 20.0% |
| !!! | ACTTATGATTTATAGAGTTT+TGG | + | chr1_1:68210812-68210831 | Msa0038710:intron | 20.0% |
| !!! | CATATCAAAACTAGTTTTTT+AGG | - | chr1_1:68210889-68210908 | None:intergenic | 20.0% |
| !!! | TTTTGATATGTTCTAAAGAA+TGG | + | chr1_1:68210899-68210918 | Msa0038710:intron | 20.0% |
| !!! | AACCATATTTTTCAACATAT+CGG | - | chr1_1:68211051-68211070 | None:intergenic | 20.0% |
| !! | ACTAATTGAAATTACATACT+AGG | - | chr1_1:68211126-68211145 | None:intergenic | 20.0% |
| !!! | GTTTTCTATATTTTCTTCAA+AGG | + | chr1_1:68211495-68211514 | Msa0038710:intron | 20.0% |
| !!! | TTCATCAGTGTATTTTTTAA+AGG | + | chr1_1:68211532-68211551 | Msa0038710:intron | 20.0% |
| !!! | AAGGCTTTTATTATGATTTT+CGG | + | chr1_1:68211551-68211570 | Msa0038710:intron | 20.0% |
| !!! | TTAGAATATTTCTAATCTCA+AGG | - | chr1_1:68211624-68211643 | None:intergenic | 20.0% |
| !!! | TAGTTCATTTTATTACAGTT+TGG | + | chr1_1:68211781-68211800 | Msa0038710:intron | 20.0% |
| !!! | GAAATATTCCTATTTGATTT+TGG | + | chr1_1:68211854-68211873 | Msa0038710:intron | 20.0% |
| !! | CTATTAATCCAAAATCAAAT+AGG | - | chr1_1:68211865-68211884 | None:intergenic | 20.0% |
| !! | AAATATGTAAAATGACACTT+TGG | + | chr1_1:68212201-68212220 | Msa0038710:intron | 20.0% |
| !! | TAATTTCCAAGAAGTAAATT+CGG | - | chr1_1:68212256-68212275 | None:intergenic | 20.0% |
| !!! | TGAATGTTTATATTGATTGA+AGG | + | chr1_1:68212512-68212531 | Msa0038710:intron | 20.0% |
| !!! | AGGTTTAAAATTTAATGTTC+TGG | + | chr1_1:68212532-68212551 | Msa0038710:intron | 20.0% |
| !!! | AAATTTAATGTTCTGGTTTA+TGG | + | chr1_1:68212539-68212558 | Msa0038710:intron | 20.0% |
| !!! | AATTTAATGTTCTGGTTTAT+GGG | + | chr1_1:68212540-68212559 | Msa0038710:intron | 20.0% |
| !!! | ATGATGAAAAACTGTTTTAA+TGG | + | chr1_1:68213172-68213191 | Msa0038710:CDS | 20.0% |
| !! | CATTATTAGTATATGTAACA+TGG | + | chr1_1:68214390-68214409 | Msa0038710:intron | 20.0% |
| !! | TTTCATTATTCAAATCAAGA+GGG | - | chr1_1:68214546-68214565 | None:intergenic | 20.0% |
| !!! | TTTTCATTATTCAAATCAAG+AGG | - | chr1_1:68214547-68214566 | None:intergenic | 20.0% |
| !! | TTTGAATAATGAAAATCTTG+AGG | + | chr1_1:68214552-68214571 | Msa0038710:intron | 20.0% |
| !!! | AATACATTTTTCACTTACTA+TGG | + | chr1_1:68214602-68214621 | Msa0038710:intron | 20.0% |
| !! | AAAAGAGAAATGAATTTCAA+GGG | + | chr1_1:68215127-68215146 | Msa0038710:CDS | 20.0% |
| !!! | TTTTTATAATCATGCAAATG+GGG | - | chr1_1:68215461-68215480 | None:intergenic | 20.0% |
| !!! | GTTTTTATAATCATGCAAAT+GGG | - | chr1_1:68215462-68215481 | None:intergenic | 20.0% |
| !!! | AGTTTTTATAATCATGCAAA+TGG | - | chr1_1:68215463-68215482 | None:intergenic | 20.0% |
| !!! | TCCATTTAAAACTCTTTTTT+TGG | + | chr1_1:68215503-68215522 | Msa0038710:three_prime_UTR | 20.0% |
| !!! | ACCAAAAAAAGAGTTTTAAA+TGG | - | chr1_1:68215507-68215526 | None:intergenic | 20.0% |
| !!! | CTTATTTTGTGAATTGTTCT+TGG | - | chr1_1:68209262-68209281 | None:intergenic | 25.0% |
| ! | ACAAAATAAGAAATCGGATA+AGG | + | chr1_1:68209272-68209291 | Msa0038710:CDS | 25.0% |
| ! | ATGTCTATAAGATATATAGG+TGG | + | chr1_1:68209475-68209494 | Msa0038710:CDS | 25.0% |
| ! | TGTCTATAAGATATATAGGT+GGG | + | chr1_1:68209476-68209495 | Msa0038710:CDS | 25.0% |
| !!! | GCTTTAATAAATTCTAAAGC+TGG | + | chr1_1:68209588-68209607 | Msa0038710:CDS | 25.0% |
| ! | AAGAATTCTTGAATAACAGT+TGG | - | chr1_1:68209744-68209763 | None:intergenic | 25.0% |
| !! | TTACTACGAATTTTCTTAAG+GGG | + | chr1_1:68209794-68209813 | Msa0038710:intron | 25.0% |
| ! | GCTTAAATTTGATGTTTGAA+GGG | - | chr1_1:68210077-68210096 | None:intergenic | 25.0% |
| ! | AGCTTAAATTTGATGTTTGA+AGG | - | chr1_1:68210078-68210097 | None:intergenic | 25.0% |
| ! | ATGCTTAAACATACACTAAT+TGG | - | chr1_1:68210276-68210295 | None:intergenic | 25.0% |
| ! | GATTAGAGTATATGTATTAG+AGG | + | chr1_1:68210324-68210343 | Msa0038710:intron | 25.0% |
| ! | TTCTATTGATATTAAGGTTC+TGG | + | chr1_1:68210357-68210376 | Msa0038710:intron | 25.0% |
| !! | TGGTATAAGCTTCTAAATTT+TGG | + | chr1_1:68210377-68210396 | Msa0038710:intron | 25.0% |
| ! | ACTATTTATTCTCAGATATG+GGG | + | chr1_1:68210406-68210425 | Msa0038710:intron | 25.0% |
| ! | TGAGAAGAAAAATGTTCAAA+GGG | - | chr1_1:68210596-68210615 | None:intergenic | 25.0% |
| ! | ATGAGAAGAAAAATGTTCAA+AGG | - | chr1_1:68210597-68210616 | None:intergenic | 25.0% |
| ! | AGCAAATGATTTGAAAATAG+AGG | + | chr1_1:68210683-68210702 | Msa0038710:intron | 25.0% |
| !!! | AGTTTTGAGAGATATGTTTT+TGG | + | chr1_1:68210753-68210772 | Msa0038710:intron | 25.0% |
| !!! | GTTTTGAGAGATATGTTTTT+GGG | + | chr1_1:68210754-68210773 | Msa0038710:intron | 25.0% |
| !!! | TATAGAGTTTTGGAGTTAAA+TGG | + | chr1_1:68210822-68210841 | Msa0038710:intron | 25.0% |
| !!! | TATGTTCTAAAGAATGGTTT+CGG | + | chr1_1:68210905-68210924 | Msa0038710:intron | 25.0% |
| !!! | GATTTTCTATTGAGTTTTGA+TGG | + | chr1_1:68211012-68211031 | Msa0038710:intron | 25.0% |
| ! | ATCCGATATGTTGAAAAATA+TGG | + | chr1_1:68211046-68211065 | Msa0038710:intron | 25.0% |
| ! | TCTAAATGTTAGATATGTGA+TGG | + | chr1_1:68211688-68211707 | Msa0038710:intron | 25.0% |
| !! | TGTTGTATTTTGTTCTGATT+TGG | + | chr1_1:68212793-68212812 | Msa0038710:intron | 25.0% |
| !! | ATATGGTTTGAGTTTCTTAT+TGG | - | chr1_1:68212952-68212971 | None:intergenic | 25.0% |
| !! | TCAATTCTGAATGTTTTTCA+AGG | + | chr1_1:68213001-68213020 | Msa0038710:intron | 25.0% |
| ! | TTTCGATGAGTTAACTAATT+TGG | + | chr1_1:68213102-68213121 | Msa0038710:intron | 25.0% |
| !!! | TGAAAAACTGTTTTAATGGA+AGG | + | chr1_1:68213176-68213195 | Msa0038710:CDS | 25.0% |
| ! | CTTTAGTCATTTCAACATTA+TGG | + | chr1_1:68213369-68213388 | Msa0038710:CDS | 25.0% |
| ! | TGAATAAATGAAAAGCAAGA+TGG | - | chr1_1:68213508-68213527 | None:intergenic | 25.0% |
| ! | CATAATAGTATTTGAAGGAA+AGG | - | chr1_1:68213543-68213562 | None:intergenic | 25.0% |
| ! | TTCCTTCAAATACTATTATG+AGG | + | chr1_1:68213543-68213562 | Msa0038710:CDS | 25.0% |
| !!! | ATGTTGATAATGATAATGAG+AGG | + | chr1_1:68213644-68213663 | Msa0038710:CDS | 25.0% |
| !!! | TGTTGATAATGATAATGAGA+GGG | + | chr1_1:68213645-68213664 | Msa0038710:CDS | 25.0% |
| !! | AGAATTTTTGTTAATCACAG+AGG | - | chr1_1:68214304-68214323 | None:intergenic | 25.0% |
| ! | TAATAATGCTCCAACATAAA+GGG | - | chr1_1:68214378-68214397 | None:intergenic | 25.0% |
| !! | ATTTGATAATTGATGAGTTG+TGG | - | chr1_1:68214513-68214532 | None:intergenic | 25.0% |
| ! | TATCATCTATCAACTAGAAA+AGG | - | chr1_1:68214578-68214597 | None:intergenic | 25.0% |
| ! | ATGGCAATCAAGTAATATTA+AGG | + | chr1_1:68214639-68214658 | Msa0038710:intron | 25.0% |
| ! | ACATTACCATCATTATCAAA+GGG | - | chr1_1:68214668-68214687 | None:intergenic | 25.0% |
| !! | ATAATGATGGTAATGTCTAT+AGG | + | chr1_1:68214672-68214691 | Msa0038710:intron | 25.0% |
| ! | GAAAAGAGAAATGAATTTCA+AGG | + | chr1_1:68215126-68215145 | Msa0038710:CDS | 25.0% |
| ! | AGTGTATTACATACAATACA+AGG | - | chr1_1:68215396-68215415 | None:intergenic | 25.0% |
| !! | TTTTATAATCATGCAAATGG+GGG | - | chr1_1:68215460-68215479 | None:intergenic | 25.0% |
| CCATGATTCTTTATCACTAA+AGG | - | chr1_1:68209145-68209164 | None:intergenic | 30.0% | |
| CCTTTAGTGATAAAGAATCA+TGG | + | chr1_1:68209142-68209161 | Msa0038710:CDS | 30.0% | |
| TTAGTGATAAAGAATCATGG+AGG | + | chr1_1:68209145-68209164 | Msa0038710:CDS | 30.0% | |
| TAACAAAGAAGGTTTCAAGA+AGG | + | chr1_1:68209317-68209336 | Msa0038710:CDS | 30.0% | |
| AACAAAGAAGGTTTCAAGAA+GGG | + | chr1_1:68209318-68209337 | Msa0038710:CDS | 30.0% | |
| TAAAGAAAAACCAGAGGAAA+GGG | + | chr1_1:68209407-68209426 | Msa0038710:CDS | 30.0% | |
| ! | AGCTGGAATATATTTGAAGT+TGG | + | chr1_1:68209440-68209459 | Msa0038710:CDS | 30.0% |
| ! | AAATGCTCTGGTTTATGTAA+TGG | - | chr1_1:68209519-68209538 | None:intergenic | 30.0% |
| AGAACATCTTATGAAGTGAT+GGG | + | chr1_1:68209621-68209640 | Msa0038710:CDS | 30.0% | |
| ! | GAATCTTCCTTTTCGATTTT+CGG | + | chr1_1:68209665-68209684 | Msa0038710:CDS | 30.0% |
| TTTAAGTCCGAAAATCGAAA+AGG | - | chr1_1:68209675-68209694 | None:intergenic | 30.0% | |
| GAAAATTCGTAGTAAAAACC+TGG | - | chr1_1:68209789-68209808 | None:intergenic | 30.0% | |
| ! | TACTACGAATTTTCTTAAGG+GGG | + | chr1_1:68209795-68209814 | Msa0038710:intron | 30.0% |
| AGGAAAGAAATAAAGGGAAT+GGG | - | chr1_1:68209971-68209990 | None:intergenic | 30.0% | |
| GAATGGAGGAAAGAAATAAA+GGG | - | chr1_1:68209977-68209996 | None:intergenic | 30.0% | |
| !! | CAAAAGCACTTGTAGAATTT+GGG | - | chr1_1:68210161-68210180 | None:intergenic | 30.0% |
| ! | CAAATTCTACAAGTGCTTTT+GGG | + | chr1_1:68210160-68210179 | Msa0038710:intron | 30.0% |
| !!! | AAGTGCTTTTGGGTTTATTT+TGG | + | chr1_1:68210170-68210189 | Msa0038710:intron | 30.0% |
| AATGAGTAATTACCAAGAGT+GGG | - | chr1_1:68210219-68210238 | None:intergenic | 30.0% | |
| GTGTATGTTTAAGCATGATT+AGG | + | chr1_1:68210280-68210299 | Msa0038710:intron | 30.0% | |
| !!! | ATGACATGAGTTTTGAGATA+TGG | + | chr1_1:68210722-68210741 | Msa0038710:intron | 30.0% |
| GTATTAATATGTACTCGATG+TGG | + | chr1_1:68210954-68210973 | Msa0038710:intron | 30.0% | |
| GATTTACTTATGACTACAAG+CGG | + | chr1_1:68210987-68211006 | Msa0038710:intron | 30.0% | |
| ! | TTCGGCGATATATTTTCTAA+AGG | + | chr1_1:68211569-68211588 | Msa0038710:intron | 30.0% |
| TGTAGTAAGGTTATACTAGA+AGG | + | chr1_1:68211713-68211732 | Msa0038710:intron | 30.0% | |
| ATACTAGAAGGATAAACTCA+CGG | + | chr1_1:68211725-68211744 | Msa0038710:intron | 30.0% | |
| !! | GAGCAACATATTTGTTATGT+CGG | + | chr1_1:68211817-68211836 | Msa0038710:intron | 30.0% |
| !! | AAAATGACACTTTGGAATTC+TGG | + | chr1_1:68212209-68212228 | Msa0038710:intron | 30.0% |
| TATGAACCGAATTTACTTCT+TGG | + | chr1_1:68212247-68212266 | Msa0038710:intron | 30.0% | |
| GGAAATTATCGAAAATACAG+AGG | + | chr1_1:68212268-68212287 | Msa0038710:intron | 30.0% | |
| AATATCCACTGAAATTTCGA+CGG | - | chr1_1:68212299-68212318 | None:intergenic | 30.0% | |
| CTGGTATATGTGTGTTAATT+TGG | + | chr1_1:68212469-68212488 | Msa0038710:intron | 30.0% | |
| AAACACATATGATCTTTCCA+TGG | - | chr1_1:68212603-68212622 | None:intergenic | 30.0% | |
| TTTCTATTTACACAGCACAA+TGG | + | chr1_1:68212752-68212771 | Msa0038710:intron | 30.0% | |
| ATGATTGTCAAAACCAAGAA+AGG | - | chr1_1:68212838-68212857 | None:intergenic | 30.0% | |
| !!! | GTTTTTCAAGGTGTTTTTCA+TGG | + | chr1_1:68213013-68213032 | Msa0038710:intron | 30.0% |
| GAGAATGCAAAGAAAAATCT+CGG | + | chr1_1:68213058-68213077 | Msa0038710:intron | 30.0% | |
| AATCAGATTTCGACTACAAT+TGG | + | chr1_1:68213143-68213162 | Msa0038710:CDS | 30.0% | |
| ATCAGATTTCGACTACAATT+GGG | + | chr1_1:68213144-68213163 | Msa0038710:CDS | 30.0% | |
| TAAAGAATCGAACAAGTGAA+TGG | - | chr1_1:68213354-68213373 | None:intergenic | 30.0% | |
| TGGTGTATACTTGTTTACTA+CGG | - | chr1_1:68213488-68213507 | None:intergenic | 30.0% | |
| CTCCTCATAATAGTATTTGA+AGG | - | chr1_1:68213548-68213567 | None:intergenic | 30.0% | |
| CTTCAAATACTATTATGAGG+AGG | + | chr1_1:68213546-68213565 | Msa0038710:CDS | 30.0% | |
| ! | CAAAGTTTTCACAATTGAGA+AGG | + | chr1_1:68213603-68213622 | Msa0038710:CDS | 30.0% |
| ATTATGATCTTCAAACCTTG+GGG | - | chr1_1:68213716-68213735 | None:intergenic | 30.0% | |
| GATTATGATCTTCAAACCTT+GGG | - | chr1_1:68213717-68213736 | None:intergenic | 30.0% | |
| !! | ATCATAATCGACTTGATGAA+AGG | + | chr1_1:68213728-68213747 | Msa0038710:CDS | 30.0% |
| !! | TCATAATCGACTTGATGAAA+GGG | + | chr1_1:68213729-68213748 | Msa0038710:CDS | 30.0% |
| ! | TCGACATGTTTTCAACATTT+TGG | + | chr1_1:68213825-68213844 | Msa0038710:CDS | 30.0% |
| ! | ACATGTTTTCAACATTTTGG+AGG | + | chr1_1:68213828-68213847 | Msa0038710:CDS | 30.0% |
| !!! | CTGCACAATATGTTTTAAAG+CGG | + | chr1_1:68213893-68213912 | Msa0038710:CDS | 30.0% |
| ! | GCATCTGAAATATTTCTCAA+CGG | + | chr1_1:68214060-68214079 | Msa0038710:CDS | 30.0% |
| ! | TTTGGTCTTTCTTTGAACTT+TGG | - | chr1_1:68214216-68214235 | None:intergenic | 30.0% |
| CTAATAATGCTCCAACATAA+AGG | - | chr1_1:68214379-68214398 | None:intergenic | 30.0% | |
| ATGAGTTGTGGAATCAAAAA+AGG | - | chr1_1:68214501-68214520 | None:intergenic | 30.0% | |
| TATGGCATACTTCTGTTTAA+TGG | + | chr1_1:68214620-68214639 | Msa0038710:intron | 30.0% | |
| GACATTACCATCATTATCAA+AGG | - | chr1_1:68214669-68214688 | None:intergenic | 30.0% | |
| !! | ATTGATTTTGATACTGTTCC+TGG | + | chr1_1:68214997-68215016 | Msa0038710:intron | 30.0% |
| CAAAAATAAATTAGTGAGCC+AGG | - | chr1_1:68215018-68215037 | None:intergenic | 30.0% | |
| !! | AACTTCTCTTTTAACTGATC+TGG | - | chr1_1:68215093-68215112 | None:intergenic | 30.0% |
| AGATCAGTTAAAAGAGAAGT+TGG | + | chr1_1:68215092-68215111 | Msa0038710:CDS | 30.0% | |
| !!! | GTTTTGAAACAAAATGAGCA+CGG | + | chr1_1:68215225-68215244 | Msa0038710:three_prime_UTR | 30.0% |
| !!! | TTTTGAAACAAAATGAGCAC+GGG | + | chr1_1:68215226-68215245 | Msa0038710:three_prime_UTR | 30.0% |
| ! | CAAGGTATCATCATCTATTT+CGG | - | chr1_1:68215378-68215397 | None:intergenic | 30.0% |
| ACTTTAGCCTAGAATAGTAA+GGG | + | chr1_1:68215413-68215432 | Msa0038710:three_prime_UTR | 30.0% | |
| ATATCAACTTCATCTGAGAG+TGG | + | chr1_1:68209066-68209085 | Msa0038710:CDS | 35.0% | |
| TAAAGAATCATGGAGGTCTT+TGG | + | chr1_1:68209152-68209171 | Msa0038710:CDS | 35.0% | |
| ATAACACTGGATTCTCTGTT+AGG | + | chr1_1:68209223-68209242 | Msa0038710:CDS | 35.0% | |
| CGTTATGCTTGTAACAAAGA+AGG | + | chr1_1:68209306-68209325 | Msa0038710:CDS | 35.0% | |
| GTCTGCTTAATCCTAAAAAC+AGG | + | chr1_1:68209343-68209362 | Msa0038710:CDS | 35.0% | |
| TTCTCATACTCAACAAGAAC+TGG | - | chr1_1:68209384-68209403 | None:intergenic | 35.0% | |
| GAAAGCTAAAGAAAAACCAG+AGG | + | chr1_1:68209401-68209420 | Msa0038710:CDS | 35.0% | |
| CTAAAGAAAAACCAGAGGAA+AGG | + | chr1_1:68209406-68209425 | Msa0038710:CDS | 35.0% | |
| CGAGAAGTAAATGAAGTTCA+AGG | + | chr1_1:68209558-68209577 | Msa0038710:CDS | 35.0% | |
| GAGAACATCTTATGAAGTGA+TGG | + | chr1_1:68209620-68209639 | Msa0038710:CDS | 35.0% | |
| TCTAATGACAACTCGTCAAA+AGG | + | chr1_1:68209701-68209720 | Msa0038710:CDS | 35.0% | |
| ! | ACTACGAATTTTCTTAAGGG+GGG | + | chr1_1:68209796-68209815 | Msa0038710:intron | 35.0% |
| GAGGAAAGAAATAAAGGGAA+TGG | - | chr1_1:68209972-68209991 | None:intergenic | 35.0% | |
| GGAATGGAGGAAAGAAATAA+AGG | - | chr1_1:68209978-68209997 | None:intergenic | 35.0% | |
| AAGTAATACAATGGGAATGG+AGG | - | chr1_1:68209991-68210010 | None:intergenic | 35.0% | |
| CGAAAGTAATACAATGGGAA+TGG | - | chr1_1:68209994-68210013 | None:intergenic | 35.0% | |
| GGGAACGAAAGTAATACAAT+GGG | - | chr1_1:68209999-68210018 | None:intergenic | 35.0% | |
| AGGGAACGAAAGTAATACAA+TGG | - | chr1_1:68210000-68210019 | None:intergenic | 35.0% | |
| AAGCTACAATCAACATCCAT+TGG | + | chr1_1:68210093-68210112 | Msa0038710:intron | 35.0% | |
| !! | CCAAAAGCACTTGTAGAATT+TGG | - | chr1_1:68210162-68210181 | None:intergenic | 35.0% |
| ! | CCAAATTCTACAAGTGCTTT+TGG | + | chr1_1:68210159-68210178 | Msa0038710:intron | 35.0% |
| CAATGAGTAATTACCAAGAG+TGG | - | chr1_1:68210220-68210239 | None:intergenic | 35.0% | |
| ! | CTCTTGGTAATTACTCATTG+AGG | + | chr1_1:68210220-68210239 | Msa0038710:intron | 35.0% |
| TTACTCATTGAGGTTCTTTG+AGG | + | chr1_1:68210230-68210249 | Msa0038710:intron | 35.0% | |
| TACTCGATGTGGATTTGATT+TGG | + | chr1_1:68210965-68210984 | Msa0038710:intron | 35.0% | |
| ! | ATATGTGATGGCTTGTAGTA+AGG | + | chr1_1:68211700-68211719 | Msa0038710:intron | 35.0% |
| AAATGAAAGAGTAAGCCACA+AGG | - | chr1_1:68212002-68212021 | None:intergenic | 35.0% | |
| AACAAAAGAGACATCCATCA+AGG | - | chr1_1:68212113-68212132 | None:intergenic | 35.0% | |
| !! | CAGTTCTGGTTTAGAATTGA+AGG | + | chr1_1:68212444-68212463 | Msa0038710:intron | 35.0% |
| ! | TGGTTTAGAATTGAAGGTTC+TGG | + | chr1_1:68212450-68212469 | Msa0038710:intron | 35.0% |
| !! | CACAAATTCTAAGGCAAGAT+AGG | - | chr1_1:68212570-68212589 | None:intergenic | 35.0% |
| TGTACAGAGCACAAATTCTA+AGG | - | chr1_1:68212579-68212598 | None:intergenic | 35.0% | |
| !!! | AGACATCAGCTACTTTTGAT+TGG | + | chr1_1:68212898-68212917 | Msa0038710:intron | 35.0% |
| ! | TTTTTCATGGTCTTTGCTCA+TGG | + | chr1_1:68213026-68213045 | Msa0038710:intron | 35.0% |
| ! | TTTTAATGGAAGGCCTACTT+CGG | + | chr1_1:68213186-68213205 | Msa0038710:CDS | 35.0% |
| CTCATTCAAATCGTATGCAT+TGG | + | chr1_1:68213230-68213249 | Msa0038710:CDS | 35.0% | |
| ! | TCTTTCAATGCTTTTCTTCG+TGG | + | chr1_1:68213313-68213332 | Msa0038710:CDS | 35.0% |
| ACATTATGGTTCAGAGAATG+AGG | + | chr1_1:68213383-68213402 | Msa0038710:CDS | 35.0% | |
| CATTATGGTTCAGAGAATGA+GGG | + | chr1_1:68213384-68213403 | Msa0038710:CDS | 35.0% | |
| ! | GGTTTCGAATGTTGATGTTT+TGG | + | chr1_1:68213666-68213685 | Msa0038710:CDS | 35.0% |
| CGATTATGATCTTCAAACCT+TGG | - | chr1_1:68213718-68213737 | None:intergenic | 35.0% | |
| !! | TTCAACATTTTGGAGGTCTT+AGG | + | chr1_1:68213835-68213854 | Msa0038710:CDS | 35.0% |
| !! | CGCTTTAAAACATATTGTGC+AGG | - | chr1_1:68213895-68213914 | None:intergenic | 35.0% |
| !!! | CACAATATGTTTTAAAGCGG+TGG | + | chr1_1:68213896-68213915 | Msa0038710:CDS | 35.0% |
| CTGAAATCTACCATGAATGT+CGG | + | chr1_1:68213949-68213968 | Msa0038710:CDS | 35.0% | |
| AGAAATATTTCAGATGCCTC+CGG | - | chr1_1:68214057-68214076 | None:intergenic | 35.0% | |
| GAGGAGTTTCTTCTTTCTAA+AGG | + | chr1_1:68214108-68214127 | Msa0038710:CDS | 35.0% | |
| !! | ACTGCTTTTGAAGACTTAGA+AGG | - | chr1_1:68214162-68214181 | None:intergenic | 35.0% |
| GTAGGTTCACTAATTGGATT+TGG | - | chr1_1:68214234-68214253 | None:intergenic | 35.0% | |
| TTTGTTAATCACAGAGGTTG+TGG | - | chr1_1:68214298-68214317 | None:intergenic | 35.0% | |
| !! | ATTCTTCACATGCTTTAGAG+TGG | + | chr1_1:68214817-68214836 | Msa0038710:intron | 35.0% |
| !! | TTCTTCACATGCTTTAGAGT+GGG | + | chr1_1:68214818-68214837 | Msa0038710:intron | 35.0% |
| CTTATTCTCTCTCAAATACC+TGG | - | chr1_1:68214956-68214975 | None:intergenic | 35.0% | |
| ! | TTTGAAACAAAATGAGCACG+GGG | + | chr1_1:68215227-68215246 | Msa0038710:three_prime_UTR | 35.0% |
| ! | TCTCCTCTGATAAAGTATCA+TGG | + | chr1_1:68215297-68215316 | Msa0038710:three_prime_UTR | 35.0% |
| ! | CTCCTCTGATAAAGTATCAT+GGG | + | chr1_1:68215298-68215317 | Msa0038710:three_prime_UTR | 35.0% |
| ATCATCATCTATTTCGGTTC+AGG | - | chr1_1:68215372-68215391 | None:intergenic | 35.0% | |
| CACTTTAGCCTAGAATAGTA+AGG | + | chr1_1:68215412-68215431 | Msa0038710:three_prime_UTR | 35.0% | |
| ATCTGAGAGTGGACAATTGA+CGG | + | chr1_1:68209077-68209096 | Msa0038710:CDS | 40.0% | |
| !! | TCACATGTTGGCCTGTTTTT+AGG | - | chr1_1:68209357-68209376 | None:intergenic | 40.0% |
| !! | TCTTATGAAGTGATGGGTCA+AGG | + | chr1_1:68209627-68209646 | Msa0038710:CDS | 40.0% |
| AAGAGAATAGTACCCACTCT+TGG | + | chr1_1:68210204-68210223 | Msa0038710:intron | 40.0% | |
| TTTATTCTCAGATATGGGGC+TGG | + | chr1_1:68210410-68210429 | Msa0038710:intron | 40.0% | |
| GAAAAGAGCTATCCGTTAGA+TGG | + | chr1_1:68211266-68211285 | Msa0038710:intron | 40.0% | |
| !! | ATTTGTTATGTCGGCGACAT+TGG | + | chr1_1:68211826-68211845 | Msa0038710:intron | 40.0% |
| ACTAGAAGGGAAACACACAT+GGG | - | chr1_1:68211951-68211970 | None:intergenic | 40.0% | |
| AACTAGAAGGGAAACACACA+TGG | - | chr1_1:68211952-68211971 | None:intergenic | 40.0% | |
| ATGTGTGTTTCCCTTCTAGT+TGG | + | chr1_1:68211951-68211970 | Msa0038710:intron | 40.0% | |
| ACAACCATCACCAACTAGAA+GGG | - | chr1_1:68211964-68211983 | None:intergenic | 40.0% | |
| AACAACCATCACCAACTAGA+AGG | - | chr1_1:68211965-68211984 | None:intergenic | 40.0% | |
| ! | AGCTTTCTACTTTGCTGCTT+GGG | - | chr1_1:68212044-68212063 | None:intergenic | 40.0% |
| TAGCTTTCTACTTTGCTGCT+TGG | - | chr1_1:68212045-68212064 | None:intergenic | 40.0% | |
| ! | TTCATCTGTGTCACTCTTTG+TGG | + | chr1_1:68212080-68212099 | Msa0038710:intron | 40.0% |
| TTTGTGGTAGGTTTCCTTGA+TGG | + | chr1_1:68212096-68212115 | Msa0038710:intron | 40.0% | |
| ! | TCAGAGTATCTGCAGCTATT+TGG | + | chr1_1:68212148-68212167 | Msa0038710:intron | 40.0% |
| ATACTCCGTCGAAATTTCAG+TGG | + | chr1_1:68212291-68212310 | Msa0038710:intron | 40.0% | |
| GTTTGTCAAGTGTTCTCGAT+AGG | + | chr1_1:68212360-68212379 | Msa0038710:intron | 40.0% | |
| CCAAAATTCACAATCGTGAC+CGG | - | chr1_1:68212417-68212436 | None:intergenic | 40.0% | |
| ! | CGGTCACGATTGTGAATTTT+GGG | + | chr1_1:68212415-68212434 | Msa0038710:intron | 40.0% |
| TCCAGCTATGCAAAGATCAT+AGG | + | chr1_1:68212697-68212716 | Msa0038710:intron | 40.0% | |
| ACCTATGATCTTTGCATAGC+TGG | - | chr1_1:68212701-68212720 | None:intergenic | 40.0% | |
| TACATTTCAGCTGCCTTTCT+TGG | + | chr1_1:68212822-68212841 | Msa0038710:intron | 40.0% | |
| ! | CATCGTCAGAGTGTGTTATT+TGG | + | chr1_1:68212855-68212874 | Msa0038710:intron | 40.0% |
| TCAAACCATATACACAGACC+AGG | + | chr1_1:68212961-68212980 | Msa0038710:intron | 40.0% | |
| !! | TATGCATTGGTCTTCAGCTT+GGG | + | chr1_1:68213243-68213262 | Msa0038710:CDS | 40.0% |
| ! | GAGGGATAATCATGCTGATT+TGG | + | chr1_1:68213402-68213421 | Msa0038710:CDS | 40.0% |
| !! | TCATGCTGATTTGGACTTCA+AGG | + | chr1_1:68213411-68213430 | Msa0038710:CDS | 40.0% |
| ATCCCAATAGTCAGCTTATG+CGG | + | chr1_1:68213461-68213480 | Msa0038710:CDS | 40.0% | |
| TATGAGGAGGACACAACAAA+AGG | + | chr1_1:68213559-68213578 | Msa0038710:CDS | 40.0% | |
| ATGAGGAGGACACAACAAAA+GGG | + | chr1_1:68213560-68213579 | Msa0038710:CDS | 40.0% | |
| TTGAAGAAAACCTTTCCCCA+AGG | + | chr1_1:68213698-68213717 | Msa0038710:CDS | 40.0% | |
| CATGTCGTATGTTTGAGAAC+CGG | + | chr1_1:68213791-68213810 | Msa0038710:CDS | 40.0% | |
| ATGTCGTATGTTTGAGAACC+GGG | + | chr1_1:68213792-68213811 | Msa0038710:CDS | 40.0% | |
| !! | AACATTTTGGAGGTCTTAGG+TGG | + | chr1_1:68213838-68213857 | Msa0038710:CDS | 40.0% |
| GATTTCAGCTTATCGACAGA+CGG | - | chr1_1:68213937-68213956 | None:intergenic | 40.0% | |
| TTGATATCGTTGTGCTTGAG+TGG | - | chr1_1:68213986-68214005 | None:intergenic | 40.0% | |
| ATTTCTCAACGGTGTTCTTG+AGG | + | chr1_1:68214071-68214090 | Msa0038710:CDS | 40.0% | |
| CTGTCTGTGAATCATCTGTT+GGG | + | chr1_1:68214184-68214203 | Msa0038710:intron | 40.0% | |
| GTGACTGTAGGTTCACTAAT+TGG | - | chr1_1:68214240-68214259 | None:intergenic | 40.0% | |
| ATCTCAGATCTAGTGACTGT+AGG | - | chr1_1:68214252-68214271 | None:intergenic | 40.0% | |
| ATGCTGACATGTACTAACAG+AGG | + | chr1_1:68214343-68214362 | Msa0038710:intron | 40.0% | |
| TGCTGACATGTACTAACAGA+GGG | + | chr1_1:68214344-68214363 | Msa0038710:intron | 40.0% | |
| GGTTTAGTGACCCTTTATGT+TGG | + | chr1_1:68214365-68214384 | Msa0038710:intron | 40.0% | |
| !! | AGGCAACCCTTTGATAATGA+TGG | + | chr1_1:68214659-68214678 | Msa0038710:intron | 40.0% |
| ! | AGAAGGTCTTATAGCAGCAA+AGG | + | chr1_1:68214846-68214865 | Msa0038710:CDS | 40.0% |
| GCACAAGAGGGATTCAATAT+TGG | + | chr1_1:68214877-68214896 | Msa0038710:CDS | 40.0% | |
| TTTAAACAATCAGTCCGTGC+TGG | + | chr1_1:68214901-68214920 | Msa0038710:CDS | 40.0% | |
| GATGAGCAAAAACACTTCAC+AGG | - | chr1_1:68215068-68215087 | None:intergenic | 40.0% | |
| TGCCCATGATACTTTATCAG+AGG | - | chr1_1:68215303-68215322 | None:intergenic | 40.0% | |
| GGTAAATGACTGTCAATTGC+AGG | - | chr1_1:68215351-68215370 | None:intergenic | 40.0% | |
| CAAGAAGCCCTTACTATTCT+AGG | - | chr1_1:68215423-68215442 | None:intergenic | 40.0% | |
| AGAATAGTAAGGGCTTCTTG+TGG | + | chr1_1:68215423-68215442 | Msa0038710:three_prime_UTR | 40.0% | |
| AGAACTGGACTGTCACATGT+TGG | - | chr1_1:68209369-68209388 | None:intergenic | 45.0% | |
| GAAAAACCAGAGGAAAGGGT+TGG | + | chr1_1:68209411-68209430 | Msa0038710:CDS | 45.0% | |
| TTACAACCAACCCTTTCCTC+TGG | - | chr1_1:68209420-68209439 | None:intergenic | 45.0% | |
| !! | GAAAGGGTTGGTTGTAAAGC+TGG | + | chr1_1:68209423-68209442 | Msa0038710:CDS | 45.0% |
| GACAACTCGTCAAAAGGAGA+TGG | + | chr1_1:68209707-68209726 | Msa0038710:CDS | 45.0% | |
| AACTCGTCAAAAGGAGATGG+TGG | + | chr1_1:68209710-68209729 | Msa0038710:CDS | 45.0% | |
| AATGAAGCTCTCTCGAAACC+AGG | + | chr1_1:68209768-68209787 | Msa0038710:intron | 45.0% | |
| GTTAGAGTTACCCCGTTAGA+TGG | + | chr1_1:68211144-68211163 | Msa0038710:intron | 45.0% | |
| TAATGGTGGCCTTTCCATAG+GGG | - | chr1_1:68211175-68211194 | None:intergenic | 45.0% | |
| CTAATGGTGGCCTTTCCATA+GGG | - | chr1_1:68211176-68211195 | None:intergenic | 45.0% | |
| TAATGGTGGCCTTTCCATTG+GGG | - | chr1_1:68211297-68211316 | None:intergenic | 45.0% | |
| CTAATGGTGGCCTTTCCATT+GGG | - | chr1_1:68211298-68211317 | None:intergenic | 45.0% | |
| !! | GTTTCCCTTCTAGTTGGTGA+TGG | + | chr1_1:68211957-68211976 | Msa0038710:intron | 45.0% |
| TGTCTCTCACTAAGTCCTTG+TGG | + | chr1_1:68211984-68212003 | Msa0038710:intron | 45.0% | |
| ! | TCTGTGTCACTCTTTGTGGT+AGG | + | chr1_1:68212084-68212103 | Msa0038710:intron | 45.0% |
| CGAACTAGAACGTCCTAGTT+CGG | - | chr1_1:68212390-68212409 | None:intergenic | 45.0% | |
| ! | CCGGTCACGATTGTGAATTT+TGG | + | chr1_1:68212414-68212433 | Msa0038710:intron | 45.0% |
| !! | ATTTTGGGTCGTGACAGTTC+TGG | + | chr1_1:68212430-68212449 | Msa0038710:intron | 45.0% |
| ATTTGTGCTCTGTACAGCCA+TGG | + | chr1_1:68212583-68212602 | Msa0038710:intron | 45.0% | |
| AGCCACTTAAAGTCCGAAGT+AGG | - | chr1_1:68213202-68213221 | None:intergenic | 45.0% | |
| !! | GTATGCATTGGTCTTCAGCT+TGG | + | chr1_1:68213242-68213261 | Msa0038710:CDS | 45.0% |
| ! | GTGAGGTCACATTTTACAGC+TGG | + | chr1_1:68213265-68213284 | Msa0038710:CDS | 45.0% |
| GACCGCATAAGCTGACTATT+GGG | - | chr1_1:68213466-68213485 | None:intergenic | 45.0% | |
| GATCTTCAAACCTTGGGGAA+AGG | - | chr1_1:68213711-68213730 | None:intergenic | 45.0% | |
| TGTCGTATGTTTGAGAACCG+GGG | + | chr1_1:68213793-68213812 | Msa0038710:CDS | 45.0% | |
| CATGTCGACATAAGAAACCC+CGG | - | chr1_1:68213813-68213832 | None:intergenic | 45.0% | |
| !! | GTCTTTAGTGCCGACATTCA+TGG | - | chr1_1:68213962-68213981 | None:intergenic | 45.0% |
| TGTTCTTGAGGCAGGGAAAA+AGG | + | chr1_1:68214083-68214102 | Msa0038710:CDS | 45.0% | |
| GCTGTCTGTGAATCATCTGT+TGG | + | chr1_1:68214183-68214202 | Msa0038710:intron | 45.0% | |
| AGAGGTTGTGGTTGACTGTA+GGG | - | chr1_1:68214286-68214305 | None:intergenic | 45.0% | |
| !! | CTTTAGAGTGGGTATCGAGA+AGG | + | chr1_1:68214829-68214848 | Msa0038710:intron | 45.0% |
| AAAGGAAGCTTCTGCACAAG+AGG | + | chr1_1:68214864-68214883 | Msa0038710:CDS | 45.0% | |
| AAGGAAGCTTCTGCACAAGA+GGG | + | chr1_1:68214865-68214884 | Msa0038710:CDS | 45.0% | |
| !! | TATAGCTGGGGTGTTGTAAG+AGG | + | chr1_1:68214925-68214944 | Msa0038710:CDS | 45.0% |
| TGTCGACAACAGATGCTCTT+AGG | + | chr1_1:68215172-68215191 | Msa0038710:three_prime_UTR | 45.0% | |
| CTCAAGTAGCGCAAATGCTC+TGG | - | chr1_1:68209531-68209550 | None:intergenic | 50.0% | |
| !! | GAAGTGATGGGTCAAGGAGT+TGG | + | chr1_1:68209633-68209652 | Msa0038710:CDS | 50.0% |
| GTTCCCTCTCTGTTCTCTCA+CGG | + | chr1_1:68210013-68210032 | Msa0038710:intron | 50.0% | |
| ATGCTTCACATGCTTCTCCC+AGG | + | chr1_1:68210433-68210452 | Msa0038710:intron | 50.0% | |
| TGCTTCACATGCTTCTCCCA+GGG | + | chr1_1:68210434-68210453 | Msa0038710:intron | 50.0% | |
| CCTAATGGTGGCCTTTCCAT+AGG | - | chr1_1:68211177-68211196 | None:intergenic | 50.0% | |
| CCTATGGAAAGGCCACCATT+AGG | + | chr1_1:68211174-68211193 | Msa0038710:intron | 50.0% | |
| ATGGAAAGGCCACCATTAGG+AGG | + | chr1_1:68211177-68211196 | Msa0038710:intron | 50.0% | |
| TGATAGCCCTCTCCTCCTAA+TGG | - | chr1_1:68211192-68211211 | None:intergenic | 50.0% | |
| AGGAGAGGGCTATCAATGAG+AGG | + | chr1_1:68211197-68211216 | Msa0038710:intron | 50.0% | |
| CCTAATGGTGGCCTTTCCAT+TGG | - | chr1_1:68211177-68211196 | None:intergenic | 50.0% | |
| CCAATGGAAAGGCCACCATT+AGG | + | chr1_1:68211296-68211315 | Msa0038710:intron | 50.0% | |
| ATGGAAAGGCCACCATTAGG+AGG | + | chr1_1:68211177-68211196 | Msa0038710:intron | 50.0% | |
| TGATAGCCCTCTCCTCCTAA+TGG | - | chr1_1:68211192-68211211 | None:intergenic | 50.0% | |
| ACCATATACACAGACCAGGC+TGG | + | chr1_1:68212965-68212984 | Msa0038710:intron | 50.0% | |
| ACCAGCCTGGTCTGTGTATA+TGG | - | chr1_1:68212969-68212988 | None:intergenic | 50.0% | |
| TGGTCTTTGCTCATGGCACA+TGG | + | chr1_1:68213033-68213052 | Msa0038710:intron | 50.0% | |
| GGCCTACTTCGGACTTTAAG+TGG | + | chr1_1:68213197-68213216 | Msa0038710:CDS | 50.0% | |
| !! | ATTGGTCTTCAGCTTGGGTG+AGG | + | chr1_1:68213248-68213267 | Msa0038710:CDS | 50.0% |
| GGACCGCATAAGCTGACTAT+TGG | - | chr1_1:68213467-68213486 | None:intergenic | 50.0% | |
| GGGTTGTCACAGTCGACATT+AGG | + | chr1_1:68213749-68213768 | Msa0038710:CDS | 50.0% | |
| TACACGTGTTTGCGCAGATC+CGG | + | chr1_1:68214035-68214054 | Msa0038710:CDS | 50.0% | |
| TCAACGGTGTTCTTGAGGCA+GGG | + | chr1_1:68214076-68214095 | Msa0038710:CDS | 50.0% | |
| CAGAGGTTGTGGTTGACTGT+AGG | - | chr1_1:68214287-68214306 | None:intergenic | 50.0% | |
| !! | AGTCCGTGCTGGTTATAGCT+GGG | + | chr1_1:68214912-68214931 | Msa0038710:CDS | 50.0% |
| ! | GTGTTGTAAGAGGTGCATCC+AGG | + | chr1_1:68214935-68214954 | Msa0038710:CDS | 50.0% |
| CTGCGACACAATAAGCTTGC+AGG | + | chr1_1:68215257-68215276 | Msa0038710:three_prime_UTR | 50.0% | |
| !! | GTGATGGGTCAAGGAGTTGG+AGG | + | chr1_1:68209636-68209655 | Msa0038710:CDS | 55.0% |
| ! | CGTCAAAAGGAGATGGTGGC+TGG | + | chr1_1:68209714-68209733 | Msa0038710:CDS | 55.0% |
| CTGCCGTGAGAGAACAGAGA+GGG | - | chr1_1:68210019-68210038 | None:intergenic | 55.0% | |
| TTCACATGCTTCTCCCAGGG+TGG | + | chr1_1:68210437-68210456 | Msa0038710:intron | 55.0% | |
| ATAGGGGCGGCTCCATCTAA+CGG | - | chr1_1:68211159-68211178 | None:intergenic | 55.0% | |
| AAGGCCACCATTAGGAGGAG+AGG | + | chr1_1:68211182-68211201 | Msa0038710:intron | 55.0% | |
| AGGCCACCATTAGGAGGAGA+GGG | + | chr1_1:68211183-68211202 | Msa0038710:intron | 55.0% | |
| TAGCCCTCTCCTCCTAATGG+TGG | - | chr1_1:68211189-68211208 | None:intergenic | 55.0% | |
| ATTGGGGCGGCTCCATCTAA+CGG | - | chr1_1:68211281-68211300 | None:intergenic | 55.0% | |
| AAGGCCACCATTAGGAGGAG+AGG | + | chr1_1:68211182-68211201 | Msa0038710:intron | 55.0% | |
| AGGCCACCATTAGGAGGAGA+GGG | + | chr1_1:68211183-68211202 | Msa0038710:intron | 55.0% | |
| TAGCCCTCTCCTCCTAATGG+TGG | - | chr1_1:68211189-68211208 | None:intergenic | 55.0% | |
| GGAGAGGGCTATCAACGAGA+TGG | + | chr1_1:68211320-68211339 | Msa0038710:intron | 55.0% | |
| CTCGATAGGCTTGCCGAACT+AGG | + | chr1_1:68212374-68212393 | Msa0038710:intron | 55.0% | |
| ACTTCAACAACGCACCAGCC+TGG | - | chr1_1:68212982-68213001 | None:intergenic | 55.0% | |
| CTCAACGGTGTTCTTGAGGC+AGG | + | chr1_1:68214075-68214094 | Msa0038710:CDS | 55.0% | |
| TGAGGCAGGGAAAAAGGCAG+AGG | + | chr1_1:68214089-68214108 | Msa0038710:CDS | 55.0% | |
| !! | CAGTCCGTGCTGGTTATAGC+TGG | + | chr1_1:68214911-68214930 | Msa0038710:CDS | 55.0% |
| !! | GTCCGTGCTGGTTATAGCTG+GGG | + | chr1_1:68214913-68214932 | Msa0038710:CDS | 55.0% |
| CACCCCAGCTATAACCAGCA+CGG | - | chr1_1:68214918-68214937 | None:intergenic | 55.0% | |
| GGGTCAAGGAGTTGGAGGCA+CGG | + | chr1_1:68209641-68209660 | Msa0038710:CDS | 60.0% | |
| CCTGCCGTGAGAGAACAGAG+AGG | - | chr1_1:68210020-68210039 | None:intergenic | 60.0% | |
| CCTCTCTGTTCTCTCACGGC+AGG | + | chr1_1:68210017-68210036 | Msa0038710:intron | 60.0% | |
| CATGCTTCTCCCAGGGTGGT+TGG | + | chr1_1:68210441-68210460 | Msa0038710:intron | 60.0% | |
| GTGTGCTCTCCAACCACCCT+GGG | - | chr1_1:68210453-68210472 | None:intergenic | 60.0% | |
| AGTGTGCTCTCCAACCACCC+TGG | - | chr1_1:68210454-68210473 | None:intergenic | 60.0% | |
| TAGGGGCGGCTCCATCTAAC+GGG | - | chr1_1:68211158-68211177 | None:intergenic | 60.0% | |
| GTTAGATGGAGCCGCCCCTA+TGG | + | chr1_1:68211158-68211177 | Msa0038710:intron | 60.0% | |
| ATGGAGCCGCCCCTATGGAA+AGG | + | chr1_1:68211163-68211182 | Msa0038710:intron | 60.0% | |
| TGGTGGCCTTTCCATAGGGG+CGG | - | chr1_1:68211172-68211191 | None:intergenic | 60.0% | |
| GTTAGATGGAGCCGCCCCAA+TGG | + | chr1_1:68211280-68211299 | Msa0038710:intron | 60.0% | |
| ATGGAGCCGCCCCAATGGAA+AGG | + | chr1_1:68211285-68211304 | Msa0038710:intron | 60.0% | |
| TGGTGGCCTTTCCATTGGGG+CGG | - | chr1_1:68211294-68211313 | None:intergenic | 60.0% | |
| !! | GGACGTTCTAGTTCGTGCGC+CGG | + | chr1_1:68212395-68212414 | Msa0038710:intron | 60.0% |
| ACGTGTTTGCGCAGATCCGG+AGG | + | chr1_1:68214038-68214057 | Msa0038710:CDS | 60.0% | |
| AGGGGCGGCTCCATCTAACG+GGG | - | chr1_1:68211157-68211176 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_1 | gene | 68209057 | 68215538 | 68209057 | ID=Msa0038710;Name=Msa0038710 |
| chr1_1 | mRNA | 68209057 | 68215538 | 68209057 | ID=Msa0038710-mRNA-1;Parent=Msa0038710;Name=Msa0038710-mRNA-1;_AED=0.07;_eAED=0.12;_QI=0|0.33|0.25|1|1|1|4|371|646 |
| chr1_1 | exon | 68209057 | 68209735 | 68209057 | ID=Msa0038710-mRNA-1:exon:22180;Parent=Msa0038710-mRNA-1 |
| chr1_1 | exon | 68213140 | 68214185 | 68213140 | ID=Msa0038710-mRNA-1:exon:22181;Parent=Msa0038710-mRNA-1 |
| chr1_1 | exon | 68214835 | 68214956 | 68214835 | ID=Msa0038710-mRNA-1:exon:22182;Parent=Msa0038710-mRNA-1 |
| chr1_1 | exon | 68215074 | 68215538 | 68215074 | ID=Msa0038710-mRNA-1:exon:22183;Parent=Msa0038710-mRNA-1 |
| chr1_1 | CDS | 68209057 | 68209735 | 68209057 | ID=Msa0038710-mRNA-1:cds;Parent=Msa0038710-mRNA-1 |
| chr1_1 | CDS | 68213140 | 68214185 | 68213140 | ID=Msa0038710-mRNA-1:cds;Parent=Msa0038710-mRNA-1 |
| chr1_1 | CDS | 68214835 | 68214956 | 68214835 | ID=Msa0038710-mRNA-1:cds;Parent=Msa0038710-mRNA-1 |
| chr1_1 | CDS | 68215074 | 68215167 | 68215074 | ID=Msa0038710-mRNA-1:cds;Parent=Msa0038710-mRNA-1 |
| chr1_1 | three_prime_UTR | 68215168 | 68215538 | 68215168 | ID=Msa0038710-mRNA-1:three_prime_utr;Parent=Msa0038710-mRNA-1 |
| Gene Sequence |
| Protein sequence |
