AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0039460

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0039460 MtrunA17_Chr1g0203601 89.474 304 26 2 1 299 1 303 0.0 523
Msa0039460 MtrunA17_Chr6g0472421 56.047 339 105 9 1 296 1 338 1.95e-107 316
Msa0039460 MtrunA17_Chr5g0397881 50.909 275 102 7 5 252 6 274 6.21e-78 241
Msa0039460 MtrunA17_Chr5g0441531 47.594 187 90 1 10 196 17 195 1.69e-56 182
Msa0039460 MtrunA17_Chr3g0134031 44.907 216 89 4 10 196 16 230 2.75e-56 186
Msa0039460 MtrunA17_Chr5g0402291 51.381 181 68 3 11 178 2 175 1.17e-51 171
Msa0039460 MtrunA17_Chr7g0257331 38.583 254 113 4 12 265 16 226 4.76e-49 163
Msa0039460 MtrunA17_Chr8g0375041 49.405 168 72 4 11 178 2 156 2.15e-45 154
Msa0039460 MtrunA17_Chr4g0047421 39.024 205 97 5 4 199 17 202 2.14e-41 142
Msa0039460 MtrunA17_Chr5g0410881 65.957 94 32 0 16 109 30 123 4.03e-41 149
Msa0039460 MtrunA17_Chr7g0260331 60.638 94 37 0 16 109 47 140 3.16e-40 143
Msa0039460 MtrunA17_Chr1g0185131 61.702 94 36 0 16 109 30 123 3.31e-38 137
Msa0039460 MtrunA17_Chr6g0467041 57.143 105 42 1 17 118 21 125 3.95e-38 137
Msa0039460 MtrunA17_Chr1g0204741 61.702 94 36 0 16 109 38 131 9.60e-37 134
Msa0039460 MtrunA17_Chr4g0039891 40.782 179 85 2 18 196 12 169 2.00e-36 135
Msa0039460 MtrunA17_Chr8g0379701 55.000 100 45 0 14 113 8 107 4.13e-36 133
Msa0039460 MtrunA17_Chr6g0485571 56.311 103 45 0 9 111 2 104 8.49e-35 129
Msa0039460 MtrunA17_Chr8g0378061 56.842 95 41 0 19 113 23 117 2.22e-34 130
Msa0039460 MtrunA17_Chr3g0135831 51.402 107 52 0 16 122 44 150 4.85e-34 127
Msa0039460 MtrunA17_Chr4g0071051 55.914 93 41 0 16 108 99 191 8.01e-34 127
Msa0039460 MtrunA17_Chr2g0284481 48.062 129 61 3 6 133 4 127 1.04e-32 124
Msa0039460 MtrunA17_Chr2g0330821 52.041 98 47 0 16 113 77 174 3.74e-32 122
Msa0039460 MtrunA17_Chr8g0392001 54.255 94 42 1 17 109 21 114 1.76e-28 112
Msa0039460 MtrunA17_Chr1g0179321 60.606 66 26 0 12 77 43 108 7.23e-23 90.9
Msa0039460 MtrunA17_Chr4g0023771 63.793 58 21 0 18 75 15 72 2.71e-19 81.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0039460 AT5G62020.1 47.636 275 110 6 11 262 16 279 1.08e-75 234
Msa0039460 AT4G11660.1 47.887 284 94 5 10 247 51 326 3.20e-70 222
Msa0039460 AT1G46264.1 46.569 204 89 3 13 196 29 232 6.73e-57 187
Msa0039460 AT4G36990.1 48.000 200 86 2 11 201 7 197 2.47e-55 181
Msa0039460 AT2G41690.1 46.667 180 96 0 16 195 38 217 8.39e-45 152
Msa0039460 AT4G17750.1 64.000 100 36 0 14 113 48 147 1.00e-40 148
Msa0039460 AT3G22830.1 64.583 96 34 0 14 109 57 152 8.36e-40 144
Msa0039460 AT1G32330.2 60.748 107 37 1 16 122 35 136 2.30e-39 144
Msa0039460 AT1G32330.1 60.748 107 37 1 16 122 35 136 2.45e-39 144
Msa0039460 AT3G02990.1 62.500 96 36 0 14 109 19 114 3.80e-38 140
Msa0039460 AT5G16820.1 64.130 92 33 0 18 109 27 118 3.94e-37 138
Msa0039460 AT5G16820.2 64.130 92 33 0 18 109 27 118 3.94e-37 138
Msa0039460 AT3G63350.1 54.630 108 48 1 1 108 12 118 1.62e-36 132
Msa0039460 AT5G03720.2 43.030 165 65 2 18 182 55 190 4.34e-36 134
Msa0039460 AT5G03720.1 43.030 165 65 2 18 182 55 190 4.34e-36 134
Msa0039460 AT5G43840.1 56.311 103 45 0 16 118 17 119 1.12e-35 130
Msa0039460 AT3G51910.1 50.943 106 52 0 16 121 27 132 3.34e-35 128
Msa0039460 AT5G54070.1 59.783 92 37 0 17 108 70 161 7.44e-35 129
Msa0039460 AT2G26150.1 56.383 94 41 0 16 109 42 135 1.20e-34 129
Msa0039460 AT2G26150.4 56.383 94 41 0 16 109 42 135 1.20e-34 129
Msa0039460 AT4G13980.1 50.909 110 51 1 19 125 24 133 3.68e-33 127
Msa0039460 AT3G24520.1 58.696 92 38 0 18 109 17 108 3.16e-32 122
Msa0039460 AT1G67970.1 43.182 132 74 1 18 148 19 150 1.07e-31 121
Msa0039460 AT5G45710.3 50.407 123 59 1 6 128 3 123 1.28e-31 120
Msa0039460 AT5G45710.1 50.407 123 59 1 6 128 3 123 1.28e-31 120
Msa0039460 AT4G18880.1 55.660 106 46 1 8 113 6 110 3.71e-31 120
Msa0039460 AT4G18870.1 41.304 92 51 1 14 102 139 230 4.13e-19 85.9
Msa0039460 AT4G18870.1 37.755 98 56 3 10 105 5 99 1.76e-16 78.6
Msa0039460 AT1G77570.1 38.636 88 49 3 19 102 27 113 5.78e-11 60.1

Find 106 sgRNAs with CRISPR-Local

Find 230 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCGCGTCGCCGTCAATTTC+AGG 0.165701 1_1:+69076536 Msa0039460:CDS
TATATCTTCTGAGAAGTTTC+TGG 0.189089 1_1:-69077129 None:intergenic
CATGCTGAGGAATTGGTTTA+TGG 0.280985 1_1:-69076023 None:intergenic
TTGTTGTGCTTAAAATATTT+AGG 0.304096 1_1:-69076217 None:intergenic
GGAACACGTTAGGTTAAGTT+AGG 0.323421 1_1:+69077056 Msa0039460:three_prime_UTR
AGGATGACGTGCGCACGTTT+GGG 0.331348 1_1:+69077097 Msa0039460:three_prime_UTR
CCCATGTGGAGATTGATTAC+CGG 0.341770 1_1:-69075863 None:intergenic
TCACTATCCCAAACAGCTTC+GGG 0.348275 1_1:-69076832 None:intergenic
ACGGAGCCATGCTGAGGAAT+TGG 0.365006 1_1:-69076030 None:intergenic
CTGGAACAACGTTCATCGTT+TGG 0.365852 1_1:+69076164 Msa0039460:CDS
ATAGAAACCCGAAGCTGTTT+GGG 0.374692 1_1:+69076825 Msa0039460:CDS
ATCACTATCCCAAACAGCTT+CGG 0.383314 1_1:-69076833 None:intergenic
CCACATGAACAGAATGATTC+AGG 0.388437 1_1:-69076913 None:intergenic
GATAGAAACCCGAAGCTGTT+TGG 0.391219 1_1:+69076824 Msa0039460:CDS
ATGAAGAAAGAAAATAGAAA+TGG 0.407898 1_1:-69075958 None:intergenic
GAGGATGACGTGCGCACGTT+TGG 0.408017 1_1:+69077096 Msa0039460:three_prime_UTR
CCTTATGTTAACGGAAAATC+CGG 0.413906 1_1:+69075844 None:intergenic
AATCAGAGCCGTTTGATTCA+AGG 0.418470 1_1:+69076942 Msa0039460:CDS
GTGATTTCGTGGAATGAAAC+TGG 0.429118 1_1:+69076145 Msa0039460:CDS
ACCGGAGAAGCGGGCGGCGG+TGG 0.436618 1_1:+69076799 Msa0039460:CDS
GACGTGCGCACGTTTGGGAC+TGG 0.438613 1_1:+69077102 Msa0039460:three_prime_UTR
TCCACCGCCGCCCGCTTCTC+CGG 0.438689 1_1:-69076800 None:intergenic
CATACGATGTTGTATCAGAT+AGG 0.441629 1_1:+69077034 Msa0039460:three_prime_UTR
CGAGAATGAGAGGTTGAGAA+AGG 0.441779 1_1:+69076619 Msa0039460:CDS
AAAGAATAGATATGTATTGA+TGG 0.445264 1_1:-69075935 None:intergenic
TTTATGGTGATAGTTCTAGA+AGG 0.448199 1_1:-69076007 None:intergenic
GTCAATTTCAGGGGAGGAGC+AGG 0.455410 1_1:+69076547 Msa0039460:CDS
CCGGCATTGGAAGCTGCCGC+CGG 0.458057 1_1:-69076476 None:intergenic
TGTTACAGTCGTGCCGGCAT+TGG 0.462484 1_1:-69076489 None:intergenic
TCACCCTTCCTTGAATCAAA+CGG 0.468104 1_1:-69076950 None:intergenic
TTAGAGAATTCCCACCGATC+AGG 0.468408 1_1:-69076383 None:intergenic
TCGCGTCGCCGTCAATTTCA+GGG 0.475190 1_1:+69076537 Msa0039460:CDS
ATCAACAAGGTGATATGTCT+TGG 0.476007 1_1:-69076104 None:intergenic
TCGTTTGTTACCGGAGAAGC+GGG 0.481702 1_1:+69076790 Msa0039460:CDS
AAGCAAATCCCTAGCGAAAA+CGG 0.486758 1_1:-69076194 None:intergenic
GAACACGTTAGGTTAAGTTA+GGG 0.490772 1_1:+69077057 Msa0039460:three_prime_UTR
ATGTTGCTCAACGGCGTCGC+CGG 0.492568 1_1:+69076757 Msa0039460:CDS
CCGGCGGCAGCTTCCAATGC+CGG 0.495670 1_1:+69076476 Msa0039460:CDS
GCAGTTAACAAAGGAAATAG+AGG 0.498390 1_1:+69076649 Msa0039460:CDS
GAATTACATAAGTATTGAGT+TGG 0.503981 1_1:-69076258 None:intergenic
GGGGTAATGTAGACAATTTG+AGG 0.505016 1_1:+69077077 Msa0039460:three_prime_UTR
GCGAAGGGAGCGAGAGGAGA+AGG 0.505444 1_1:+69076860 Msa0039460:CDS
TGCTCCTCCCCTGAAATTGA+CGG 0.505469 1_1:-69076545 None:intergenic
TCACCAACGATGTGATTTCG+TGG 0.508504 1_1:+69076134 Msa0039460:CDS
TATCAGATAGGGAACACGTT+AGG 0.524555 1_1:+69077046 Msa0039460:three_prime_UTR
GCAGACGCTTCGTTTGTTAC+CGG 0.526094 1_1:+69076781 Msa0039460:CDS
TTCGTTTGTTACCGGAGAAG+CGG 0.527929 1_1:+69076789 Msa0039460:CDS
TGAATCTTTCCGACGAGGCG+AGG 0.528771 1_1:+69076406 Msa0039460:CDS
ATTCAAGGAAGGGTGAAAAG+AGG 0.529327 1_1:+69076957 Msa0039460:CDS
TGATATGTCTTGGTGAGAAA+CGG 0.529943 1_1:-69076094 None:intergenic
CCTCAGCATGGCTCCGTCGG+TGG 0.535536 1_1:+69076036 Msa0039460:exon
TTCCTCGCCGTCAAATTCTC+CGG 0.536709 1_1:+69076583 Msa0039460:CDS
GTTACCGGAGAAGCGGGCGG+CGG 0.537247 1_1:+69076796 Msa0039460:CDS
ATTCCTCAGCATGGCTCCGT+CGG 0.539067 1_1:+69076033 Msa0039460:exon
AGGAGAAGGACGGTGTATTG+AGG 0.542287 1_1:+69076874 Msa0039460:CDS
ATTCCACGAAATCACATCGT+TGG 0.546456 1_1:-69076137 None:intergenic
GAAAATCGTTTCAGCATCGC+CGG 0.555017 1_1:+69076457 Msa0039460:CDS
GAATTACGCAAATTCTCAAA+CGG 0.560736 1_1:+69076712 Msa0039460:CDS
GTATTGATGGAGAGAAGAGA+AGG 0.561055 1_1:-69075922 None:intergenic
CGCGAAACTTCGTTCCCATG+TGG 0.562552 1_1:-69075877 None:intergenic
AAAAGTTGTACCTGATCGGT+GGG 0.563579 1_1:+69076373 Msa0039460:CDS
GAAATTGACGGCGACGCGAT+AGG 0.563683 1_1:-69076533 None:intergenic
TGGGATAGTGATTGATGCGA+AGG 0.564853 1_1:+69076844 Msa0039460:CDS
CGCTACTAGACGAGAATGAG+AGG 0.567007 1_1:+69076609 Msa0039460:CDS
AAATCCCTAGCGAAAACGGT+AGG 0.568543 1_1:-69076190 None:intergenic
AGCGCCGCCGGAGAATTTGA+CGG 0.570000 1_1:-69076590 None:intergenic
TTCTCAAACGGAAGGCGGTG+CGG 0.570972 1_1:+69076724 Msa0039460:CDS
CAAACGGAAGGCGGTGCGGA+AGG 0.571648 1_1:+69076728 Msa0039460:CDS
GAGCCGTTTGATTCAAGGAA+GGG 0.572438 1_1:+69076947 Msa0039460:CDS
TTCTCGTCTAGTAGCGCCGC+CGG 0.574568 1_1:-69076602 None:intergenic
AACAAACGAAGCGTCTGCAC+CGG 0.577210 1_1:-69076776 None:intergenic
GCTCCGTCGGTGGAACATAA+CGG 0.578392 1_1:+69076046 Msa0039460:CDS
ATACGATGTTGTATCAGATA+GGG 0.589245 1_1:+69077035 Msa0039460:three_prime_UTR
ATTGATGCGAAGGGAGCGAG+AGG 0.590361 1_1:+69076854 Msa0039460:CDS
GGTGAGAAACGGCGTCGGAG+TGG 0.597255 1_1:-69076083 None:intergenic
CTTTCCGACGAGGCGAGGAA+CGG 0.598393 1_1:+69076411 Msa0039460:CDS
TCCGGTAATCAATCTCCACA+TGG 0.598933 1_1:+69075862 Msa0039460:five_prime_UTR
AGAGCCGTTTGATTCAAGGA+AGG 0.601442 1_1:+69076946 Msa0039460:CDS
CGCCGGAGAATTTGACGGCG+AGG 0.602724 1_1:-69076585 None:intergenic
AATCCCTAGCGAAAACGGTA+GGG 0.608706 1_1:-69076189 None:intergenic
TACGCAAATTCTCAAACGGA+AGG 0.609476 1_1:+69076716 Msa0039460:CDS
GTCGCCGTCAATTTCAGGGG+AGG 0.611650 1_1:+69076541 Msa0039460:CDS
TTTGTTACCGGAGAAGCGGG+CGG 0.612649 1_1:+69076793 Msa0039460:CDS
GCAAATTCTCAAACGGAAGG+CGG 0.615095 1_1:+69076719 Msa0039460:CDS
TTCTCTGTGATATTCAGCGA+CGG 0.625241 1_1:+69076435 Msa0039460:CDS
CGCGTCGCCGTCAATTTCAG+GGG 0.626408 1_1:+69076538 Msa0039460:CDS
GACGCGATAGGCTTTGCTGT+CGG 0.627107 1_1:-69076521 None:intergenic
CCACCGACGGAGCCATGCTG+AGG 0.627792 1_1:-69076036 None:intergenic
GGGATAGTGATTGATGCGAA+GGG 0.627894 1_1:+69076845 Msa0039460:CDS
GAAGCCGTTCCTCGCCTCGT+CGG 0.628152 1_1:-69076415 None:intergenic
CATAAACCAATTCCTCAGCA+TGG 0.635915 1_1:+69076024 Msa0039460:exon
GGAGAACATGCAGTTAACAA+AGG 0.636251 1_1:+69076640 Msa0039460:CDS
CTCGCCGTCAAATTCTCCGG+CGG 0.636913 1_1:+69076586 Msa0039460:CDS
CCTGAATCATTCTGTTCATG+TGG 0.637037 1_1:+69076913 Msa0039460:CDS
AGGGAGCGAGAGGAGAAGGA+CGG 0.652383 1_1:+69076864 Msa0039460:CDS
GTGAAAAGAGGAAAATGTTG+CGG 0.654247 1_1:+69076969 Msa0039460:CDS
TGGTGACGATTTCATCAACA+AGG 0.656213 1_1:-69076117 None:intergenic
AGGAAAAGAATGTTGCTCAA+CGG 0.662127 1_1:+69076748 Msa0039460:CDS
AATCGTTTCAGCATCGCCGG+CGG 0.666535 1_1:+69076460 Msa0039460:CDS
GTCTTGGTGAGAAACGGCGT+CGG 0.667306 1_1:-69076088 None:intergenic
ACGGTGTATTGAGGATGATG+TGG 0.668550 1_1:+69076883 Msa0039460:CDS
AACACGTTAGGTTAAGTTAG+GGG 0.686043 1_1:+69077058 Msa0039460:three_prime_UTR
TCGCCGTTATGTTCCACCGA+CGG 0.686749 1_1:-69076049 None:intergenic
CCGGTAATCAATCTCCACAT+GGG 0.689932 1_1:+69075863 Msa0039460:five_prime_UTR
TCTAATGAATCTTTCCGACG+AGG 0.711943 1_1:+69076401 Msa0039460:CDS
CGGCACGACTGTAACAAAAG+CGG 0.729434 1_1:+69076496 Msa0039460:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTATTTCTGTTAATTT+TGG + chr1_1:69076332-69076351 Msa0039460:intron 10.0%
!!! TTTTTTATTTCTGTTAATTT+TGG + chr1_1:69076332-69076351 Msa0039460:intron 10.0%
!! AAAGAATAGATATGTATTGA+TGG - chr1_1:69075938-69075957 None:intergenic 20.0%
!! ATGAAGAAAGAAAATAGAAA+TGG - chr1_1:69075961-69075980 None:intergenic 20.0%
!! TTGTTGTGCTTAAAATATTT+AGG - chr1_1:69076220-69076239 None:intergenic 20.0%
!!! TGTTAATTTTGGTTATTTTC+AGG + chr1_1:69076343-69076362 Msa0039460:intron 20.0%
!!! GTTAATTTTGGTTATTTTCA+GGG + chr1_1:69076344-69076363 Msa0039460:intron 20.0%
!!! TACTTTGGAGTTATTTTTTT+GGG + chr1_1:69077188-69077207 Msa0039460:three_prime_UTR 20.0%
!! AAAGAATAGATATGTATTGA+TGG - chr1_1:69075938-69075957 None:intergenic 20.0%
!! ATGAAGAAAGAAAATAGAAA+TGG - chr1_1:69075961-69075980 None:intergenic 20.0%
!! TTGTTGTGCTTAAAATATTT+AGG - chr1_1:69076220-69076239 None:intergenic 20.0%
!!! TGTTAATTTTGGTTATTTTC+AGG + chr1_1:69076343-69076362 Msa0039460:intron 20.0%
!!! GTTAATTTTGGTTATTTTCA+GGG + chr1_1:69076344-69076363 Msa0039460:intron 20.0%
!!! GAATTACATAAGTATTGAGT+TGG - chr1_1:69076261-69076280 None:intergenic 25.0%
! TTAAAAAAGTTGTACCTGAT+CGG + chr1_1:69076369-69076388 Msa0039460:CDS 25.0%
!!! CTACTTTGGAGTTATTTTTT+TGG + chr1_1:69077187-69077206 Msa0039460:three_prime_UTR 25.0%
!!! GAATTACATAAGTATTGAGT+TGG - chr1_1:69076261-69076280 None:intergenic 25.0%
! TTAAAAAAGTTGTACCTGAT+CGG + chr1_1:69076369-69076388 Msa0039460:CDS 25.0%
!! TTTATGGTGATAGTTCTAGA+AGG - chr1_1:69076010-69076029 None:intergenic 30.0%
GAATTACGCAAATTCTCAAA+CGG + chr1_1:69076712-69076731 Msa0039460:CDS 30.0%
ATACGATGTTGTATCAGATA+GGG + chr1_1:69077035-69077054 Msa0039460:three_prime_UTR 30.0%
! TATATCTTCTGAGAAGTTTC+TGG - chr1_1:69077132-69077151 None:intergenic 30.0%
!!! CAACTGTTGTTTTACTACTT+TGG + chr1_1:69077173-69077192 Msa0039460:three_prime_UTR 30.0%
!! TTTATGGTGATAGTTCTAGA+AGG - chr1_1:69076010-69076029 None:intergenic 30.0%
GAATTACGCAAATTCTCAAA+CGG + chr1_1:69076712-69076731 Msa0039460:CDS 30.0%
ATACGATGTTGTATCAGATA+GGG + chr1_1:69077035-69077054 Msa0039460:three_prime_UTR 30.0%
! TATATCTTCTGAGAAGTTTC+TGG - chr1_1:69077132-69077151 None:intergenic 30.0%
!!! CAACTGTTGTTTTACTACTT+TGG + chr1_1:69077173-69077192 Msa0039460:three_prime_UTR 30.0%
TGATATGTCTTGGTGAGAAA+CGG - chr1_1:69076097-69076116 None:intergenic 35.0%
ATCAACAAGGTGATATGTCT+TGG - chr1_1:69076107-69076126 None:intergenic 35.0%
GCAGTTAACAAAGGAAATAG+AGG + chr1_1:69076649-69076668 Msa0039460:CDS 35.0%
AGGAAAAGAATGTTGCTCAA+CGG + chr1_1:69076748-69076767 Msa0039460:CDS 35.0%
GTGAAAAGAGGAAAATGTTG+CGG + chr1_1:69076969-69076988 Msa0039460:CDS 35.0%
CATACGATGTTGTATCAGAT+AGG + chr1_1:69077034-69077053 Msa0039460:three_prime_UTR 35.0%
GAACACGTTAGGTTAAGTTA+GGG + chr1_1:69077057-69077076 Msa0039460:three_prime_UTR 35.0%
AACACGTTAGGTTAAGTTAG+GGG + chr1_1:69077058-69077077 Msa0039460:three_prime_UTR 35.0%
TGATATGTCTTGGTGAGAAA+CGG - chr1_1:69076097-69076116 None:intergenic 35.0%
ATCAACAAGGTGATATGTCT+TGG - chr1_1:69076107-69076126 None:intergenic 35.0%
GCAGTTAACAAAGGAAATAG+AGG + chr1_1:69076649-69076668 Msa0039460:CDS 35.0%
AGGAAAAGAATGTTGCTCAA+CGG + chr1_1:69076748-69076767 Msa0039460:CDS 35.0%
GTGAAAAGAGGAAAATGTTG+CGG + chr1_1:69076969-69076988 Msa0039460:CDS 35.0%
CATACGATGTTGTATCAGAT+AGG + chr1_1:69077034-69077053 Msa0039460:three_prime_UTR 35.0%
GAACACGTTAGGTTAAGTTA+GGG + chr1_1:69077057-69077076 Msa0039460:three_prime_UTR 35.0%
AACACGTTAGGTTAAGTTAG+GGG + chr1_1:69077058-69077077 Msa0039460:three_prime_UTR 35.0%
! GTATTGATGGAGAGAAGAGA+AGG - chr1_1:69075925-69075944 None:intergenic 40.0%
! CATGCTGAGGAATTGGTTTA+TGG - chr1_1:69076026-69076045 None:intergenic 40.0%
CATAAACCAATTCCTCAGCA+TGG + chr1_1:69076024-69076043 Msa0039460:exon 40.0%
! TGGTGACGATTTCATCAACA+AGG - chr1_1:69076120-69076139 None:intergenic 40.0%
ATTCCACGAAATCACATCGT+TGG - chr1_1:69076140-69076159 None:intergenic 40.0%
GTGATTTCGTGGAATGAAAC+TGG + chr1_1:69076145-69076164 Msa0039460:CDS 40.0%
AAGCAAATCCCTAGCGAAAA+CGG - chr1_1:69076197-69076216 None:intergenic 40.0%
AAAAAGTTGTACCTGATCGG+TGG + chr1_1:69076372-69076391 Msa0039460:CDS 40.0%
AAAAGTTGTACCTGATCGGT+GGG + chr1_1:69076373-69076392 Msa0039460:CDS 40.0%
TCTAATGAATCTTTCCGACG+AGG + chr1_1:69076401-69076420 Msa0039460:CDS 40.0%
TTCTCTGTGATATTCAGCGA+CGG + chr1_1:69076435-69076454 Msa0039460:CDS 40.0%
GGAGAACATGCAGTTAACAA+AGG + chr1_1:69076640-69076659 Msa0039460:CDS 40.0%
TACGCAAATTCTCAAACGGA+AGG + chr1_1:69076716-69076735 Msa0039460:CDS 40.0%
ATAGAAACCCGAAGCTGTTT+GGG + chr1_1:69076825-69076844 Msa0039460:CDS 40.0%
ATCACTATCCCAAACAGCTT+CGG - chr1_1:69076836-69076855 None:intergenic 40.0%
CCACATGAACAGAATGATTC+AGG - chr1_1:69076916-69076935 None:intergenic 40.0%
CCTGAATCATTCTGTTCATG+TGG + chr1_1:69076913-69076932 Msa0039460:CDS 40.0%
AATCAGAGCCGTTTGATTCA+AGG + chr1_1:69076942-69076961 Msa0039460:CDS 40.0%
TCACCCTTCCTTGAATCAAA+CGG - chr1_1:69076953-69076972 None:intergenic 40.0%
ATTCAAGGAAGGGTGAAAAG+AGG + chr1_1:69076957-69076976 Msa0039460:CDS 40.0%
TATCAGATAGGGAACACGTT+AGG + chr1_1:69077046-69077065 Msa0039460:three_prime_UTR 40.0%
GGAACACGTTAGGTTAAGTT+AGG + chr1_1:69077056-69077075 Msa0039460:three_prime_UTR 40.0%
GGGGTAATGTAGACAATTTG+AGG + chr1_1:69077077-69077096 Msa0039460:three_prime_UTR 40.0%
! GTATTGATGGAGAGAAGAGA+AGG - chr1_1:69075925-69075944 None:intergenic 40.0%
! CATGCTGAGGAATTGGTTTA+TGG - chr1_1:69076026-69076045 None:intergenic 40.0%
CATAAACCAATTCCTCAGCA+TGG + chr1_1:69076024-69076043 Msa0039460:exon 40.0%
! TGGTGACGATTTCATCAACA+AGG - chr1_1:69076120-69076139 None:intergenic 40.0%
ATTCCACGAAATCACATCGT+TGG - chr1_1:69076140-69076159 None:intergenic 40.0%
GTGATTTCGTGGAATGAAAC+TGG + chr1_1:69076145-69076164 Msa0039460:CDS 40.0%
AAGCAAATCCCTAGCGAAAA+CGG - chr1_1:69076197-69076216 None:intergenic 40.0%
AAAAAGTTGTACCTGATCGG+TGG + chr1_1:69076372-69076391 Msa0039460:CDS 40.0%
AAAAGTTGTACCTGATCGGT+GGG + chr1_1:69076373-69076392 Msa0039460:CDS 40.0%
TCTAATGAATCTTTCCGACG+AGG + chr1_1:69076401-69076420 Msa0039460:CDS 40.0%
TTCTCTGTGATATTCAGCGA+CGG + chr1_1:69076435-69076454 Msa0039460:CDS 40.0%
GGAGAACATGCAGTTAACAA+AGG + chr1_1:69076640-69076659 Msa0039460:CDS 40.0%
TACGCAAATTCTCAAACGGA+AGG + chr1_1:69076716-69076735 Msa0039460:CDS 40.0%
ATAGAAACCCGAAGCTGTTT+GGG + chr1_1:69076825-69076844 Msa0039460:CDS 40.0%
ATCACTATCCCAAACAGCTT+CGG - chr1_1:69076836-69076855 None:intergenic 40.0%
CCACATGAACAGAATGATTC+AGG - chr1_1:69076916-69076935 None:intergenic 40.0%
CCTGAATCATTCTGTTCATG+TGG + chr1_1:69076913-69076932 Msa0039460:CDS 40.0%
AATCAGAGCCGTTTGATTCA+AGG + chr1_1:69076942-69076961 Msa0039460:CDS 40.0%
TCACCCTTCCTTGAATCAAA+CGG - chr1_1:69076953-69076972 None:intergenic 40.0%
ATTCAAGGAAGGGTGAAAAG+AGG + chr1_1:69076957-69076976 Msa0039460:CDS 40.0%
TATCAGATAGGGAACACGTT+AGG + chr1_1:69077046-69077065 Msa0039460:three_prime_UTR 40.0%
GGAACACGTTAGGTTAAGTT+AGG + chr1_1:69077056-69077075 Msa0039460:three_prime_UTR 40.0%
GGGGTAATGTAGACAATTTG+AGG + chr1_1:69077077-69077096 Msa0039460:three_prime_UTR 40.0%
TCCGGTAATCAATCTCCACA+TGG + chr1_1:69075862-69075881 Msa0039460:five_prime_UTR 45.0%
CCCATGTGGAGATTGATTAC+CGG - chr1_1:69075866-69075885 None:intergenic 45.0%
CCGGTAATCAATCTCCACAT+GGG + chr1_1:69075863-69075882 Msa0039460:five_prime_UTR 45.0%
TCACCAACGATGTGATTTCG+TGG + chr1_1:69076134-69076153 Msa0039460:CDS 45.0%
CTGGAACAACGTTCATCGTT+TGG + chr1_1:69076164-69076183 Msa0039460:CDS 45.0%
AATCCCTAGCGAAAACGGTA+GGG - chr1_1:69076192-69076211 None:intergenic 45.0%
AAATCCCTAGCGAAAACGGT+AGG - chr1_1:69076193-69076212 None:intergenic 45.0%
TTAGAGAATTCCCACCGATC+AGG - chr1_1:69076386-69076405 None:intergenic 45.0%
GAAAATCGTTTCAGCATCGC+CGG + chr1_1:69076457-69076476 Msa0039460:CDS 45.0%
CGAGAATGAGAGGTTGAGAA+AGG + chr1_1:69076619-69076638 Msa0039460:CDS 45.0%
GCAAATTCTCAAACGGAAGG+CGG + chr1_1:69076719-69076738 Msa0039460:CDS 45.0%
! TTCGTTTGTTACCGGAGAAG+CGG + chr1_1:69076789-69076808 Msa0039460:CDS 45.0%
GATAGAAACCCGAAGCTGTT+TGG + chr1_1:69076824-69076843 Msa0039460:CDS 45.0%
TCACTATCCCAAACAGCTTC+GGG - chr1_1:69076835-69076854 None:intergenic 45.0%
TGGGATAGTGATTGATGCGA+AGG + chr1_1:69076844-69076863 Msa0039460:CDS 45.0%
GGGATAGTGATTGATGCGAA+GGG + chr1_1:69076845-69076864 Msa0039460:CDS 45.0%
ACGGTGTATTGAGGATGATG+TGG + chr1_1:69076883-69076902 Msa0039460:CDS 45.0%
AGAGCCGTTTGATTCAAGGA+AGG + chr1_1:69076946-69076965 Msa0039460:CDS 45.0%
GAGCCGTTTGATTCAAGGAA+GGG + chr1_1:69076947-69076966 Msa0039460:CDS 45.0%
TCCGGTAATCAATCTCCACA+TGG + chr1_1:69075862-69075881 Msa0039460:five_prime_UTR 45.0%
CCCATGTGGAGATTGATTAC+CGG - chr1_1:69075866-69075885 None:intergenic 45.0%
CCGGTAATCAATCTCCACAT+GGG + chr1_1:69075863-69075882 Msa0039460:five_prime_UTR 45.0%
TCACCAACGATGTGATTTCG+TGG + chr1_1:69076134-69076153 Msa0039460:CDS 45.0%
CTGGAACAACGTTCATCGTT+TGG + chr1_1:69076164-69076183 Msa0039460:CDS 45.0%
AATCCCTAGCGAAAACGGTA+GGG - chr1_1:69076192-69076211 None:intergenic 45.0%
AAATCCCTAGCGAAAACGGT+AGG - chr1_1:69076193-69076212 None:intergenic 45.0%
TTAGAGAATTCCCACCGATC+AGG - chr1_1:69076386-69076405 None:intergenic 45.0%
GAAAATCGTTTCAGCATCGC+CGG + chr1_1:69076457-69076476 Msa0039460:CDS 45.0%
CGAGAATGAGAGGTTGAGAA+AGG + chr1_1:69076619-69076638 Msa0039460:CDS 45.0%
GCAAATTCTCAAACGGAAGG+CGG + chr1_1:69076719-69076738 Msa0039460:CDS 45.0%
! TTCGTTTGTTACCGGAGAAG+CGG + chr1_1:69076789-69076808 Msa0039460:CDS 45.0%
GATAGAAACCCGAAGCTGTT+TGG + chr1_1:69076824-69076843 Msa0039460:CDS 45.0%
TCACTATCCCAAACAGCTTC+GGG - chr1_1:69076835-69076854 None:intergenic 45.0%
TGGGATAGTGATTGATGCGA+AGG + chr1_1:69076844-69076863 Msa0039460:CDS 45.0%
GGGATAGTGATTGATGCGAA+GGG + chr1_1:69076845-69076864 Msa0039460:CDS 45.0%
ACGGTGTATTGAGGATGATG+TGG + chr1_1:69076883-69076902 Msa0039460:CDS 45.0%
AGAGCCGTTTGATTCAAGGA+AGG + chr1_1:69076946-69076965 Msa0039460:CDS 45.0%
GAGCCGTTTGATTCAAGGAA+GGG + chr1_1:69076947-69076966 Msa0039460:CDS 45.0%
! GAACCCTACCGTTTTCGCTA+GGG + chr1_1:69076186-69076205 Msa0039460:CDS 50.0%
! CGCTTTTGTTACAGTCGTGC+CGG - chr1_1:69076498-69076517 None:intergenic 50.0%
CGGCACGACTGTAACAAAAG+CGG + chr1_1:69076496-69076515 Msa0039460:CDS 50.0%
TGCTCCTCCCCTGAAATTGA+CGG - chr1_1:69076548-69076567 None:intergenic 50.0%
TTCCTCGCCGTCAAATTCTC+CGG + chr1_1:69076583-69076602 Msa0039460:CDS 50.0%
CGCTACTAGACGAGAATGAG+AGG + chr1_1:69076609-69076628 Msa0039460:CDS 50.0%
! AACAAACGAAGCGTCTGCAC+CGG - chr1_1:69076779-69076798 None:intergenic 50.0%
! GCAGACGCTTCGTTTGTTAC+CGG + chr1_1:69076781-69076800 Msa0039460:CDS 50.0%
! TCGTTTGTTACCGGAGAAGC+GGG + chr1_1:69076790-69076809 Msa0039460:CDS 50.0%
AGGAGAAGGACGGTGTATTG+AGG + chr1_1:69076874-69076893 Msa0039460:CDS 50.0%
! GAACCCTACCGTTTTCGCTA+GGG + chr1_1:69076186-69076205 Msa0039460:CDS 50.0%
! CGCTTTTGTTACAGTCGTGC+CGG - chr1_1:69076498-69076517 None:intergenic 50.0%
CGGCACGACTGTAACAAAAG+CGG + chr1_1:69076496-69076515 Msa0039460:CDS 50.0%
TGCTCCTCCCCTGAAATTGA+CGG - chr1_1:69076548-69076567 None:intergenic 50.0%
TTCCTCGCCGTCAAATTCTC+CGG + chr1_1:69076583-69076602 Msa0039460:CDS 50.0%
CGCTACTAGACGAGAATGAG+AGG + chr1_1:69076609-69076628 Msa0039460:CDS 50.0%
! AACAAACGAAGCGTCTGCAC+CGG - chr1_1:69076779-69076798 None:intergenic 50.0%
! GCAGACGCTTCGTTTGTTAC+CGG + chr1_1:69076781-69076800 Msa0039460:CDS 50.0%
! TCGTTTGTTACCGGAGAAGC+GGG + chr1_1:69076790-69076809 Msa0039460:CDS 50.0%
AGGAGAAGGACGGTGTATTG+AGG + chr1_1:69076874-69076893 Msa0039460:CDS 50.0%
CGCGAAACTTCGTTCCCATG+TGG - chr1_1:69075880-69075899 None:intergenic 55.0%
ACGGAGCCATGCTGAGGAAT+TGG - chr1_1:69076033-69076052 None:intergenic 55.0%
ATTCCTCAGCATGGCTCCGT+CGG + chr1_1:69076033-69076052 Msa0039460:exon 55.0%
GCTCCGTCGGTGGAACATAA+CGG + chr1_1:69076046-69076065 Msa0039460:CDS 55.0%
TCGCCGTTATGTTCCACCGA+CGG - chr1_1:69076052-69076071 None:intergenic 55.0%
GTCTTGGTGAGAAACGGCGT+CGG - chr1_1:69076091-69076110 None:intergenic 55.0%
! GGAACCCTACCGTTTTCGCT+AGG + chr1_1:69076185-69076204 Msa0039460:CDS 55.0%
TGAATCTTTCCGACGAGGCG+AGG + chr1_1:69076406-69076425 Msa0039460:CDS 55.0%
AATCGTTTCAGCATCGCCGG+CGG + chr1_1:69076460-69076479 Msa0039460:CDS 55.0%
! TGTTACAGTCGTGCCGGCAT+TGG - chr1_1:69076492-69076511 None:intergenic 55.0%
! GACGCGATAGGCTTTGCTGT+CGG - chr1_1:69076524-69076543 None:intergenic 55.0%
GAAATTGACGGCGACGCGAT+AGG - chr1_1:69076536-69076555 None:intergenic 55.0%
ATCGCGTCGCCGTCAATTTC+AGG + chr1_1:69076536-69076555 Msa0039460:CDS 55.0%
TCGCGTCGCCGTCAATTTCA+GGG + chr1_1:69076537-69076556 Msa0039460:CDS 55.0%
GTCAATTTCAGGGGAGGAGC+AGG + chr1_1:69076547-69076566 Msa0039460:CDS 55.0%
TTCTCAAACGGAAGGCGGTG+CGG + chr1_1:69076724-69076743 Msa0039460:CDS 55.0%
TTTGTTACCGGAGAAGCGGG+CGG + chr1_1:69076793-69076812 Msa0039460:CDS 55.0%
ATTGATGCGAAGGGAGCGAG+AGG + chr1_1:69076854-69076873 Msa0039460:CDS 55.0%
AGGATGACGTGCGCACGTTT+GGG + chr1_1:69077097-69077116 Msa0039460:three_prime_UTR 55.0%
CGCGAAACTTCGTTCCCATG+TGG - chr1_1:69075880-69075899 None:intergenic 55.0%
ACGGAGCCATGCTGAGGAAT+TGG - chr1_1:69076033-69076052 None:intergenic 55.0%
ATTCCTCAGCATGGCTCCGT+CGG + chr1_1:69076033-69076052 Msa0039460:exon 55.0%
GCTCCGTCGGTGGAACATAA+CGG + chr1_1:69076046-69076065 Msa0039460:CDS 55.0%
TCGCCGTTATGTTCCACCGA+CGG - chr1_1:69076052-69076071 None:intergenic 55.0%
GTCTTGGTGAGAAACGGCGT+CGG - chr1_1:69076091-69076110 None:intergenic 55.0%
! GGAACCCTACCGTTTTCGCT+AGG + chr1_1:69076185-69076204 Msa0039460:CDS 55.0%
TGAATCTTTCCGACGAGGCG+AGG + chr1_1:69076406-69076425 Msa0039460:CDS 55.0%
AATCGTTTCAGCATCGCCGG+CGG + chr1_1:69076460-69076479 Msa0039460:CDS 55.0%
! TGTTACAGTCGTGCCGGCAT+TGG - chr1_1:69076492-69076511 None:intergenic 55.0%
! GACGCGATAGGCTTTGCTGT+CGG - chr1_1:69076524-69076543 None:intergenic 55.0%
GAAATTGACGGCGACGCGAT+AGG - chr1_1:69076536-69076555 None:intergenic 55.0%
ATCGCGTCGCCGTCAATTTC+AGG + chr1_1:69076536-69076555 Msa0039460:CDS 55.0%
TCGCGTCGCCGTCAATTTCA+GGG + chr1_1:69076537-69076556 Msa0039460:CDS 55.0%
GTCAATTTCAGGGGAGGAGC+AGG + chr1_1:69076547-69076566 Msa0039460:CDS 55.0%
TTCTCAAACGGAAGGCGGTG+CGG + chr1_1:69076724-69076743 Msa0039460:CDS 55.0%
TTTGTTACCGGAGAAGCGGG+CGG + chr1_1:69076793-69076812 Msa0039460:CDS 55.0%
ATTGATGCGAAGGGAGCGAG+AGG + chr1_1:69076854-69076873 Msa0039460:CDS 55.0%
AGGATGACGTGCGCACGTTT+GGG + chr1_1:69077097-69077116 Msa0039460:three_prime_UTR 55.0%
CTTTCCGACGAGGCGAGGAA+CGG + chr1_1:69076411-69076430 Msa0039460:CDS 60.0%
CGCGTCGCCGTCAATTTCAG+GGG + chr1_1:69076538-69076557 Msa0039460:CDS 60.0%
GTCGCCGTCAATTTCAGGGG+AGG + chr1_1:69076541-69076560 Msa0039460:CDS 60.0%
CTCGCCGTCAAATTCTCCGG+CGG + chr1_1:69076586-69076605 Msa0039460:CDS 60.0%
AGCGCCGCCGGAGAATTTGA+CGG - chr1_1:69076593-69076612 None:intergenic 60.0%
TTCTCGTCTAGTAGCGCCGC+CGG - chr1_1:69076605-69076624 None:intergenic 60.0%
ATGTTGCTCAACGGCGTCGC+CGG + chr1_1:69076757-69076776 Msa0039460:CDS 60.0%
AGGGAGCGAGAGGAGAAGGA+CGG + chr1_1:69076864-69076883 Msa0039460:CDS 60.0%
GAGGATGACGTGCGCACGTT+TGG + chr1_1:69077096-69077115 Msa0039460:three_prime_UTR 60.0%
CTTTCCGACGAGGCGAGGAA+CGG + chr1_1:69076411-69076430 Msa0039460:CDS 60.0%
CGCGTCGCCGTCAATTTCAG+GGG + chr1_1:69076538-69076557 Msa0039460:CDS 60.0%
GTCGCCGTCAATTTCAGGGG+AGG + chr1_1:69076541-69076560 Msa0039460:CDS 60.0%
CTCGCCGTCAAATTCTCCGG+CGG + chr1_1:69076586-69076605 Msa0039460:CDS 60.0%
AGCGCCGCCGGAGAATTTGA+CGG - chr1_1:69076593-69076612 None:intergenic 60.0%
TTCTCGTCTAGTAGCGCCGC+CGG - chr1_1:69076605-69076624 None:intergenic 60.0%
ATGTTGCTCAACGGCGTCGC+CGG + chr1_1:69076757-69076776 Msa0039460:CDS 60.0%
AGGGAGCGAGAGGAGAAGGA+CGG + chr1_1:69076864-69076883 Msa0039460:CDS 60.0%
GAGGATGACGTGCGCACGTT+TGG + chr1_1:69077096-69077115 Msa0039460:three_prime_UTR 60.0%
! GGTGAGAAACGGCGTCGGAG+TGG - chr1_1:69076086-69076105 None:intergenic 65.0%
GAAGCCGTTCCTCGCCTCGT+CGG - chr1_1:69076418-69076437 None:intergenic 65.0%
CGCCGGAGAATTTGACGGCG+AGG - chr1_1:69076588-69076607 None:intergenic 65.0%
CAAACGGAAGGCGGTGCGGA+AGG + chr1_1:69076728-69076747 Msa0039460:CDS 65.0%
GCGAAGGGAGCGAGAGGAGA+AGG + chr1_1:69076860-69076879 Msa0039460:CDS 65.0%
! GACGTGCGCACGTTTGGGAC+TGG + chr1_1:69077102-69077121 Msa0039460:three_prime_UTR 65.0%
! GGTGAGAAACGGCGTCGGAG+TGG - chr1_1:69076086-69076105 None:intergenic 65.0%
GAAGCCGTTCCTCGCCTCGT+CGG - chr1_1:69076418-69076437 None:intergenic 65.0%
CGCCGGAGAATTTGACGGCG+AGG - chr1_1:69076588-69076607 None:intergenic 65.0%
CAAACGGAAGGCGGTGCGGA+AGG + chr1_1:69076728-69076747 Msa0039460:CDS 65.0%
GCGAAGGGAGCGAGAGGAGA+AGG + chr1_1:69076860-69076879 Msa0039460:CDS 65.0%
! GACGTGCGCACGTTTGGGAC+TGG + chr1_1:69077102-69077121 Msa0039460:three_prime_UTR 65.0%
CCACCGACGGAGCCATGCTG+AGG - chr1_1:69076039-69076058 None:intergenic 70.0%
CCTCAGCATGGCTCCGTCGG+TGG + chr1_1:69076036-69076055 Msa0039460:exon 70.0%
! CCGGCATTGGAAGCTGCCGC+CGG - chr1_1:69076479-69076498 None:intergenic 70.0%
CCGGCGGCAGCTTCCAATGC+CGG + chr1_1:69076476-69076495 Msa0039460:CDS 70.0%
GTTACCGGAGAAGCGGGCGG+CGG + chr1_1:69076796-69076815 Msa0039460:CDS 70.0%
CCACCGACGGAGCCATGCTG+AGG - chr1_1:69076039-69076058 None:intergenic 70.0%
CCTCAGCATGGCTCCGTCGG+TGG + chr1_1:69076036-69076055 Msa0039460:exon 70.0%
! CCGGCATTGGAAGCTGCCGC+CGG - chr1_1:69076479-69076498 None:intergenic 70.0%
CCGGCGGCAGCTTCCAATGC+CGG + chr1_1:69076476-69076495 Msa0039460:CDS 70.0%
GTTACCGGAGAAGCGGGCGG+CGG + chr1_1:69076796-69076815 Msa0039460:CDS 70.0%
TCCACCGCCGCCCGCTTCTC+CGG - chr1_1:69076803-69076822 None:intergenic 75.0%
TCCACCGCCGCCCGCTTCTC+CGG - chr1_1:69076803-69076822 None:intergenic 75.0%
! ACCGGAGAAGCGGGCGGCGG+TGG + chr1_1:69076799-69076818 Msa0039460:CDS 80.0%
! ACCGGAGAAGCGGGCGGCGG+TGG + chr1_1:69076799-69076818 Msa0039460:CDS 80.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 69075856 69077208 69075856 ID=Msa0039460;Name=Msa0039460
chr1_1 mRNA 69075856 69077208 69075856 ID=Msa0039460-mRNA-1;Parent=Msa0039460;Name=Msa0039460-mRNA-1;_AED=0.03;_eAED=0.03;_QI=187|1|1|1|1|1|2|175|299
chr1_1 exon 69075856 69076273 69075856 ID=Msa0039460-mRNA-1:exon:22611;Parent=Msa0039460-mRNA-1
chr1_1 exon 69076365 69077208 69076365 ID=Msa0039460-mRNA-1:exon:22612;Parent=Msa0039460-mRNA-1
chr1_1 five_prime_UTR 69075856 69076042 69075856 ID=Msa0039460-mRNA-1:five_prime_utr;Parent=Msa0039460-mRNA-1
chr1_1 CDS 69076043 69076273 69076043 ID=Msa0039460-mRNA-1:cds;Parent=Msa0039460-mRNA-1
chr1_1 CDS 69076365 69077033 69076365 ID=Msa0039460-mRNA-1:cds;Parent=Msa0039460-mRNA-1
chr1_1 three_prime_UTR 69077034 69077208 69077034 ID=Msa0039460-mRNA-1:three_prime_utr;Parent=Msa0039460-mRNA-1
Gene Sequence

>Msa0039460

ATGGCTCCGTCGGTGGAACATAACGGCGAGTCTCAAAGATCCACTCCGACGCCGTTTCTCACCAAGACATATCACCTTGTTGATGAAATCGTCACCAACGATGTGATTTCGTGGAATGAAACTGGAACAACGTTCATCGTTTGGAACCCTACCGTTTTCGCTAGGGATTTGCTTCCTAAATATTTTAAGCACAACAATTTCTCTAGCTTCGTTCGCCAACTCAATACTTATGGATTTAAAAAAGTTGTACCTGATCGGTGGGAATTCTCTAATGAATCTTTCCGACGAGGCGAGGAACGGCTTCTCTGTGATATTCAGCGACGGAAAATCGTTTCAGCATCGCCGGCGGCAGCTTCCAATGCCGGCACGACTGTAACAAAAGCGGTTCCGACAGCAAAGCCTATCGCGTCGCCGTCAATTTCAGGGGAGGAGCAGGTGATTTCTTCGAATTCCTCGCCGTCAAATTCTCCGGCGGCGCTACTAGACGAGAATGAGAGGTTGAGAAAGGAGAACATGCAGTTAACAAAGGAAATAGAGGACATGAAATCGCTTTACAACAATATATTCAATCTTCTGTCGAATTACGCAAATTCTCAAACGGAAGGCGGTGCGGAAGGAAAAGAATGTTGCTCAACGGCGTCGCCGGTGCAGACGCTTCGTTTGTTACCGGAGAAGCGGGCGGCGGTGGAAGATAGAAACCCGAAGCTGTTTGGGATAGTGATTGATGCGAAGGGAGCGAGAGGAGAAGGACGGTGTATTGAGGATGATGTGGTGTTGAGCCTGAATCATTCTGTTCATGTGGACGTGAAATCAGAGCCGTTTGATTCAAGGAAGGGTGAAAAGAGGAAAATGTTGCGGCTAAATCAGTGCTATAGAGCGAATCAGAGTGCGTGTAATTGA
Protein sequence

>Msa0039460

MAPSVEHNGESQRSTPTPFLTKTYHLVDEIVTNDVISWNETGTTFIVWNPTVFARDLLPKYFKHNNFSSFVRQLNTYGFKKVVPDRWEFSNESFRRGEERLLCDIQRRKIVSASPAAASNAGTTVTKAVPTAKPIASPSISGEEQVISSNSSPSNSPAALLDENERLRKENMQLTKEIEDMKSLYNNIFNLLSNYANSQTEGGAEGKECCSTASPVQTLRLLPEKRAAVEDRNPKLFGIVIDAKGARGEGRCIEDDVVLSLNHSVHVDVKSEPFDSRKGEKRKMLRLNQCYRANQSACN*