Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0039630 | AES62590.1 | 94.565 | 368 | 12 | 3 | 1 | 361 | 1 | 367 | 0.0 | 694 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0039630 | sp|Q9LT89|TCP19_ARATH | 47.305 | 334 | 110 | 11 | 25 | 347 | 1 | 279 | 1.08e-73 | 233 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|---|---|
| Msa0039630 | TF | TCP |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0039630 | MtrunA17_Chr1g0204001 | 96.450 | 338 | 10 | 2 | 25 | 361 | 1 | 337 | 0.0 | 658 |
| Msa0039630 | MtrunA17_Chr8g0350941 | 50.357 | 280 | 104 | 11 | 86 | 353 | 76 | 332 | 2.64e-71 | 226 |
| Msa0039630 | MtrunA17_Chr2g0277361 | 58.475 | 118 | 45 | 1 | 64 | 177 | 101 | 218 | 1.50e-37 | 140 |
| Msa0039630 | MtrunA17_Chr7g0224581 | 71.765 | 85 | 24 | 0 | 82 | 166 | 43 | 127 | 2.39e-36 | 133 |
| Msa0039630 | MtrunA17_Chr4g0060601 | 54.264 | 129 | 48 | 3 | 39 | 156 | 36 | 164 | 5.01e-34 | 130 |
| Msa0039630 | MtrunA17_Chr5g0416581 | 67.059 | 85 | 28 | 0 | 86 | 170 | 64 | 148 | 4.60e-33 | 126 |
| Msa0039630 | MtrunA17_Chr1g0180911 | 82.090 | 67 | 12 | 0 | 85 | 151 | 45 | 111 | 9.60e-33 | 121 |
| Msa0039630 | MtrunA17_Chr1g0164881 | 71.053 | 76 | 22 | 0 | 76 | 151 | 19 | 94 | 1.98e-31 | 119 |
| Msa0039630 | MtrunA17_Chr1g0211941 | 68.750 | 80 | 25 | 0 | 82 | 161 | 26 | 105 | 4.48e-31 | 118 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0039630 | AT5G51910.1 | 47.305 | 334 | 110 | 11 | 25 | 347 | 1 | 279 | 1.09e-74 | 233 |
| Msa0039630 | AT5G51910.2 | 47.305 | 334 | 110 | 11 | 25 | 347 | 1 | 279 | 1.09e-74 | 233 |
| Msa0039630 | AT2G45680.1 | 49.825 | 285 | 122 | 8 | 86 | 353 | 72 | 352 | 3.52e-67 | 216 |
| Msa0039630 | AT1G58100.1 | 71.264 | 87 | 18 | 2 | 86 | 165 | 57 | 143 | 5.87e-34 | 130 |
| Msa0039630 | AT3G27010.2 | 59.322 | 118 | 33 | 4 | 35 | 150 | 35 | 139 | 2.09e-33 | 126 |
| Msa0039630 | AT3G27010.1 | 59.322 | 118 | 33 | 4 | 35 | 150 | 35 | 139 | 2.09e-33 | 126 |
| Msa0039630 | AT1G69690.1 | 81.818 | 66 | 12 | 0 | 86 | 151 | 49 | 114 | 2.67e-33 | 126 |
| Msa0039630 | AT1G72010.1 | 69.620 | 79 | 24 | 0 | 83 | 161 | 57 | 135 | 7.45e-33 | 126 |
| Msa0039630 | AT3G47620.1 | 63.918 | 97 | 20 | 2 | 61 | 151 | 92 | 179 | 1.79e-32 | 127 |
| Msa0039630 | AT1G35560.1 | 81.818 | 66 | 12 | 0 | 86 | 151 | 52 | 117 | 8.60e-32 | 122 |
| Msa0039630 | AT5G23280.1 | 65.909 | 88 | 27 | 1 | 64 | 151 | 17 | 101 | 2.46e-31 | 119 |
| Msa0039630 | AT5G08330.1 | 78.261 | 69 | 15 | 0 | 83 | 151 | 25 | 93 | 6.99e-31 | 117 |
| Msa0039630 | AT5G41030.1 | 60.256 | 78 | 31 | 0 | 77 | 154 | 56 | 133 | 1.35e-27 | 109 |
| Msa0039630 | AT2G37000.1 | 76.667 | 60 | 14 | 0 | 89 | 148 | 43 | 102 | 2.23e-25 | 101 |
| Msa0039630 | AT3G45150.1 | 60.317 | 63 | 25 | 0 | 85 | 147 | 13 | 75 | 2.22e-21 | 90.1 |
| Msa0039630 | AT1G58100.2 | 86.111 | 36 | 5 | 0 | 86 | 121 | 57 | 92 | 1.24e-14 | 74.7 |
Find 106 sgRNAs with CRISPR-Local
Find 242 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGATTCATTAAACTTGAATT+TGG | 0.121922 | 1_1:-69505965 | None:intergenic |
| TAAGAAAGAGTTGCAGTTTA+TGG | 0.151782 | 1_1:+69506240 | Msa0039630:CDS |
| TGACTGTGTTTGAAGCTTTC+AGG | 0.188549 | 1_1:-69505093 | None:intergenic |
| GGGTTGTTCTTCTGCAAATT+TGG | 0.196594 | 1_1:+69506261 | Msa0039630:CDS |
| TGGGGCTCTCCACCATTGTT+AGG | 0.228635 | 1_1:+69504967 | Msa0039630:CDS |
| CCGTATGCTGTTTGAGCAAT+TGG | 0.236628 | 1_1:-69505827 | None:intergenic |
| TTTGAACCGGCATCGGAATA+AGG | 0.270424 | 1_1:-69505433 | None:intergenic |
| GATCAAGTTTCAATGTGTTC+TGG | 0.294475 | 1_1:+69505797 | Msa0039630:CDS |
| TAATGAATCAGCCACAGTTT+TGG | 0.305680 | 1_1:+69505978 | Msa0039630:CDS |
| CCTCGTCAGTTGAAAGATTC+TGG | 0.326356 | 1_1:-69505552 | None:intergenic |
| CGTATGCTGTTTGAGCAATT+GGG | 0.328215 | 1_1:-69505826 | None:intergenic |
| CAACTTAAACTTCAATTTGA+AGG | 0.336529 | 1_1:-69506304 | None:intergenic |
| AAGAAAGAGTTGCAGTTTAT+GGG | 0.351004 | 1_1:+69506241 | Msa0039630:CDS |
| GGTGGTGGTAGTGGTGAAAA+TGG | 0.355388 | 1_1:+69505866 | Msa0039630:CDS |
| AGGGACGTGGTCGGAGAATC+AGG | 0.360591 | 1_1:+69505510 | Msa0039630:CDS |
| GATTCATTAAACTTGAATTT+GGG | 0.361250 | 1_1:-69505964 | None:intergenic |
| AAAACATCATCGCCGCCGTT+AGG | 0.366433 | 1_1:-69505305 | None:intergenic |
| GCAGAAACAAAATCAGAAAT+AGG | 0.368459 | 1_1:-69506040 | None:intergenic |
| TTCCAATGCTTCATCTACTT+TGG | 0.393966 | 1_1:+69506111 | Msa0039630:CDS |
| GTGGTGGTTTAGTTCCATTA+TGG | 0.415083 | 1_1:+69505888 | Msa0039630:CDS |
| TTACTTACAACAGGCCATAA+TGG | 0.429653 | 1_1:-69505902 | None:intergenic |
| GGGGCTCTCCACCATTGTTA+GGG | 0.432076 | 1_1:+69504968 | Msa0039630:CDS |
| GACAACGGAGCCTGCGGCTG+CGG | 0.434289 | 1_1:+69505373 | Msa0039630:CDS |
| TGGTCGGAGAATCAGGATTC+CGG | 0.442503 | 1_1:+69505517 | Msa0039630:CDS |
| ATTCTGGCGGCGCATGTCGC+CGG | 0.450483 | 1_1:-69505536 | None:intergenic |
| AAACATCATCGCCGCCGTTA+GGG | 0.450955 | 1_1:-69505304 | None:intergenic |
| ACCTCCGGTGGTGGTGGTAG+TGG | 0.461112 | 1_1:+69505857 | Msa0039630:CDS |
| GCCACTGTCATCGTTTGAAC+CGG | 0.470202 | 1_1:-69505446 | None:intergenic |
| ATCATCGAAGCTACCGGCAC+TGG | 0.470702 | 1_1:+69505638 | Msa0039630:CDS |
| GCCACCACCTCCGGTGGTGG+TGG | 0.474522 | 1_1:+69505851 | Msa0039630:CDS |
| AACATCATCTCCGGCGAGAC+CGG | 0.479647 | 1_1:+69505709 | Msa0039630:CDS |
| CTACAAATACTCAGATGCTA+AGG | 0.482853 | 1_1:+69506194 | Msa0039630:CDS |
| GGTGCCACCACCTCCGGTGG+TGG | 0.483512 | 1_1:+69505848 | Msa0039630:CDS |
| CTGTTGTAAGTAACGGTGTT+GGG | 0.497781 | 1_1:+69505912 | Msa0039630:CDS |
| CCAACACCGTTACTTACAAC+AGG | 0.501497 | 1_1:-69505911 | None:intergenic |
| GCATACGGTGCCACCACCTC+CGG | 0.506126 | 1_1:+69505842 | Msa0039630:CDS |
| GGTGTTGGGTCTAATACAAC+AGG | 0.506356 | 1_1:+69505926 | Msa0039630:CDS |
| ACCGGACGGTGAAGATGCTC+CGG | 0.509905 | 1_1:+69505727 | Msa0039630:CDS |
| GGTAGTGGTGAAAATGGTGG+TGG | 0.510528 | 1_1:+69505872 | Msa0039630:CDS |
| GAAAGAAGAGCTAACGGAAA+CGG | 0.511043 | 1_1:+69505400 | Msa0039630:CDS |
| TTCACCACTACCACCACCAC+CGG | 0.511362 | 1_1:-69505861 | None:intergenic |
| TTTCAACTGACGAGGGAGCT+AGG | 0.517084 | 1_1:+69505560 | Msa0039630:CDS |
| GTCCCTCCACCTTCGTGTGA+CGG | 0.518085 | 1_1:-69505493 | None:intergenic |
| ACCGGAGCATCTTCACCGTC+CGG | 0.521868 | 1_1:-69505728 | None:intergenic |
| TCTTTCATTACCGCAGCCGC+AGG | 0.522108 | 1_1:-69505383 | None:intergenic |
| CCGGTAGCTTCGATGATAGA+AGG | 0.522884 | 1_1:-69505632 | None:intergenic |
| CAATTTGAAGGATTTGAAGA+GGG | 0.523447 | 1_1:-69506292 | None:intergenic |
| CCAATTGCTCAAACAGCATA+CGG | 0.523616 | 1_1:+69505827 | Msa0039630:CDS |
| AGCCAAAGTAGATGAAGCAT+TGG | 0.524527 | 1_1:-69506113 | None:intergenic |
| ACCACCACCACCGGAGGTGG+TGG | 0.527488 | 1_1:-69505852 | None:intergenic |
| GGTGGTAGTGGTGAAAATGG+TGG | 0.530669 | 1_1:+69505869 | Msa0039630:CDS |
| CAGCTTGTTCTAGTAACCAC+CGG | 0.530941 | 1_1:-69505607 | None:intergenic |
| CCTTCTATCATCGAAGCTAC+CGG | 0.531231 | 1_1:+69505632 | Msa0039630:CDS |
| GTCATCGTTTGAACCGGCAT+CGG | 0.531689 | 1_1:-69505440 | None:intergenic |
| CAACAGCCTTATTCCGATGC+CGG | 0.533446 | 1_1:+69505427 | Msa0039630:CDS |
| GGCCGGCACAGTTCCAGTGC+CGG | 0.539294 | 1_1:-69505651 | None:intergenic |
| TAAGCAGTAGAAGCATTTGA+AGG | 0.540001 | 1_1:-69506082 | None:intergenic |
| CACACGAAGGTGGAGGGACG+TGG | 0.552204 | 1_1:+69505497 | Msa0039630:CDS |
| GAAGATTCCAACATCATCTC+CGG | 0.553576 | 1_1:+69505700 | Msa0039630:CDS |
| AGTATCTCCGTCGGAGACAA+CGG | 0.553999 | 1_1:+69505358 | Msa0039630:CDS |
| ACTACCACCACCACCGGAGG+TGG | 0.554618 | 1_1:-69505855 | None:intergenic |
| TCAATTTGAAGGATTTGAAG+AGG | 0.556225 | 1_1:-69506293 | None:intergenic |
| AGACCGTCACACGAAGGTGG+AGG | 0.559373 | 1_1:+69505490 | Msa0039630:CDS |
| CCGGCCATCGCTGTTTCCGT+CGG | 0.560469 | 1_1:+69505668 | Msa0039630:CDS |
| GAAGCATTTGAAGGTTCTTG+TGG | 0.561789 | 1_1:-69506073 | None:intergenic |
| GCCATCGCTGTTTCCGTCGG+AGG | 0.562359 | 1_1:+69505671 | Msa0039630:CDS |
| CCACCGGATTGTTTCTCCGT+CGG | 0.564902 | 1_1:-69505591 | None:intergenic |
| CCGACGGAAACAGCGATGGC+CGG | 0.568312 | 1_1:-69505668 | None:intergenic |
| CCAGAATCTTTCAACTGACG+AGG | 0.568890 | 1_1:+69505552 | Msa0039630:CDS |
| CCTGTTGTAAGTAACGGTGT+TGG | 0.571104 | 1_1:+69505911 | Msa0039630:CDS |
| TCAAACGATGACAGTGGCGG+CGG | 0.571801 | 1_1:+69505451 | Msa0039630:CDS |
| TCTTCACCGTCCGGTCTCGC+CGG | 0.573077 | 1_1:-69505719 | None:intergenic |
| CATCTGAGTATTTGTAGCAG+AGG | 0.582913 | 1_1:-69506188 | None:intergenic |
| TACAAATACTCAGATGCTAA+GGG | 0.585086 | 1_1:+69506195 | Msa0039630:CDS |
| GAAAGACCGTCACACGAAGG+TGG | 0.585783 | 1_1:+69505487 | Msa0039630:CDS |
| GCAGGCTCCGTTGTCTCCGA+CGG | 0.585882 | 1_1:-69505365 | None:intergenic |
| GAAGTTACTGAACTCAAACT+AGG | 0.588049 | 1_1:-69506136 | None:intergenic |
| TACCGGCACTGGAACTGTGC+CGG | 0.588215 | 1_1:+69505649 | Msa0039630:CDS |
| GTATGCTGTTTGAGCAATTG+GGG | 0.588581 | 1_1:-69505825 | None:intergenic |
| AATCCGACGGAGAAACAATC+CGG | 0.589954 | 1_1:+69505588 | Msa0039630:CDS |
| TTATGGCCTGTTGTAAGTAA+CGG | 0.597870 | 1_1:+69505905 | Msa0039630:CDS |
| GGTCTCGCCGGAGATGATGT+TGG | 0.599874 | 1_1:-69505707 | None:intergenic |
| TGACAGTGGCGGCGGCGAAG+AGG | 0.607175 | 1_1:+69505459 | Msa0039630:CDS |
| GACCGTCACACGAAGGTGGA+GGG | 0.613473 | 1_1:+69505491 | Msa0039630:CDS |
| ACCTCCGACGGAAACAGCGA+TGG | 0.615156 | 1_1:-69505672 | None:intergenic |
| CGAAGGTGGAGGGACGTGGT+CGG | 0.617193 | 1_1:+69505501 | Msa0039630:CDS |
| TCATCTCCGGCGAGACCGGA+CGG | 0.619808 | 1_1:+69505713 | Msa0039630:CDS |
| CTCTTCCACACGGATATGTG+GGG | 0.621943 | 1_1:+69504949 | None:intergenic |
| TACGGTGCCACCACCTCCGG+TGG | 0.622609 | 1_1:+69505845 | Msa0039630:CDS |
| ATAACAAACCCTAACAATGG+TGG | 0.638466 | 1_1:-69504976 | None:intergenic |
| GTCGGAGACAACGGAGCCTG+CGG | 0.638611 | 1_1:+69505367 | Msa0039630:CDS |
| CAATACTGAAGTATCTCCGT+CGG | 0.638733 | 1_1:+69505349 | Msa0039630:CDS |
| GAAATAACAAACCCTAACAA+TGG | 0.639443 | 1_1:-69504979 | None:intergenic |
| AGGATGGAAGTGAACCCTAA+CGG | 0.640403 | 1_1:+69505290 | Msa0039630:intron |
| CAGAATCTTTCAACTGACGA+GGG | 0.645062 | 1_1:+69505553 | Msa0039630:CDS |
| GAGCTAGGTCACAAATCCGA+CGG | 0.657749 | 1_1:+69505575 | Msa0039630:CDS |
| GGTAATGAAAGAAGAGCTAA+CGG | 0.657843 | 1_1:+69505394 | Msa0039630:CDS |
| ACCACTACCACCACCACCGG+AGG | 0.661408 | 1_1:-69505858 | None:intergenic |
| AATCTTCAACGTACCTCCGA+CGG | 0.665588 | 1_1:-69505684 | None:intergenic |
| GGTTCAAACGATGACAGTGG+CGG | 0.668294 | 1_1:+69505448 | Msa0039630:CDS |
| CGTCAGTTGAAAGATTCTGG+CGG | 0.698563 | 1_1:-69505549 | None:intergenic |
| ATCGAAAGACCGTCACACGA+AGG | 0.699940 | 1_1:+69505484 | Msa0039630:CDS |
| GCCGGTTCAAACGATGACAG+TGG | 0.712883 | 1_1:+69505445 | Msa0039630:CDS |
| GCAGGAATAGCCCAAAACTG+TGG | 0.725268 | 1_1:-69505989 | None:intergenic |
| CCGACGGAGAAACAATCCGG+TGG | 0.744089 | 1_1:+69505591 | Msa0039630:CDS |
| ATGGAAGTGAACCCTAACGG+CGG | 0.769753 | 1_1:+69505293 | Msa0039630:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AGAAAAAAATCAATTTTTTT+GGG | - | chr1_1:69505157-69505176 | None:intergenic | 10.0% |
| !!! | AAGAAAAAAATCAATTTTTT+TGG | - | chr1_1:69505158-69505177 | None:intergenic | 10.0% |
| !!! | TTATTTGTTAATTTTTGTTT+AGG | + | chr1_1:69505270-69505289 | Msa0039630:intron | 10.0% |
| !!! | AGAAAAAAATCAATTTTTTT+GGG | - | chr1_1:69505157-69505176 | None:intergenic | 10.0% |
| !!! | AAGAAAAAAATCAATTTTTT+TGG | - | chr1_1:69505158-69505177 | None:intergenic | 10.0% |
| !!! | TTATTTGTTAATTTTTGTTT+AGG | + | chr1_1:69505270-69505289 | Msa0039630:intron | 10.0% |
| !!! | GAAAAAAATCAATTTTTTTG+GGG | - | chr1_1:69505156-69505175 | None:intergenic | 15.0% |
| !!! | GAAAAAAATCAATTTTTTTG+GGG | - | chr1_1:69505156-69505175 | None:intergenic | 15.0% |
| !!! | TTGTTAATTTTTGTTTAGGA+TGG | + | chr1_1:69505274-69505293 | Msa0039630:intron | 20.0% |
| !! | GATTCATTAAACTTGAATTT+GGG | - | chr1_1:69505967-69505986 | None:intergenic | 20.0% |
| !! | TGATTCATTAAACTTGAATT+TGG | - | chr1_1:69505968-69505987 | None:intergenic | 20.0% |
| !!! | TTGTTAATTTTTGTTTAGGA+TGG | + | chr1_1:69505274-69505293 | Msa0039630:intron | 20.0% |
| !! | GATTCATTAAACTTGAATTT+GGG | - | chr1_1:69505967-69505986 | None:intergenic | 20.0% |
| !! | TGATTCATTAAACTTGAATT+TGG | - | chr1_1:69505968-69505987 | None:intergenic | 20.0% |
| !!! | TCTTTTTCGTTTTTTTCATC+TGG | + | chr1_1:69505206-69505225 | Msa0039630:intron | 25.0% |
| !!! | CTTTTTCGTTTTTTTCATCT+GGG | + | chr1_1:69505207-69505226 | Msa0039630:intron | 25.0% |
| !!! | GGTTTTGATCATTCTTTAAT+GGG | + | chr1_1:69505228-69505247 | Msa0039630:intron | 25.0% |
| ! | CTTGTTTGCACATTAAAAAA+TGG | - | chr1_1:69506019-69506038 | None:intergenic | 25.0% |
| !!! | TCTTTTTCGTTTTTTTCATC+TGG | + | chr1_1:69505206-69505225 | Msa0039630:intron | 25.0% |
| !!! | CTTTTTCGTTTTTTTCATCT+GGG | + | chr1_1:69505207-69505226 | Msa0039630:intron | 25.0% |
| !!! | GGTTTTGATCATTCTTTAAT+GGG | + | chr1_1:69505228-69505247 | Msa0039630:intron | 25.0% |
| ! | CTTGTTTGCACATTAAAAAA+TGG | - | chr1_1:69506019-69506038 | None:intergenic | 25.0% |
| GAAATAACAAACCCTAACAA+TGG | - | chr1_1:69504982-69505001 | None:intergenic | 30.0% | |
| !! | GGGTTTTGATCATTCTTTAA+TGG | + | chr1_1:69505227-69505246 | Msa0039630:intron | 30.0% |
| GAATTTGGGAACATGAAAAA+TGG | - | chr1_1:69505953-69505972 | None:intergenic | 30.0% | |
| GCAGAAACAAAATCAGAAAT+AGG | - | chr1_1:69506043-69506062 | None:intergenic | 30.0% | |
| TACAAATACTCAGATGCTAA+GGG | + | chr1_1:69506195-69506214 | Msa0039630:CDS | 30.0% | |
| TAAGAAAGAGTTGCAGTTTA+TGG | + | chr1_1:69506240-69506259 | Msa0039630:CDS | 30.0% | |
| AAGAAAGAGTTGCAGTTTAT+GGG | + | chr1_1:69506241-69506260 | Msa0039630:CDS | 30.0% | |
| CAATTTGAAGGATTTGAAGA+GGG | - | chr1_1:69506295-69506314 | None:intergenic | 30.0% | |
| TCAATTTGAAGGATTTGAAG+AGG | - | chr1_1:69506296-69506315 | None:intergenic | 30.0% | |
| GAAATAACAAACCCTAACAA+TGG | - | chr1_1:69504982-69505001 | None:intergenic | 30.0% | |
| !! | GGGTTTTGATCATTCTTTAA+TGG | + | chr1_1:69505227-69505246 | Msa0039630:intron | 30.0% |
| GAATTTGGGAACATGAAAAA+TGG | - | chr1_1:69505953-69505972 | None:intergenic | 30.0% | |
| GCAGAAACAAAATCAGAAAT+AGG | - | chr1_1:69506043-69506062 | None:intergenic | 30.0% | |
| TACAAATACTCAGATGCTAA+GGG | + | chr1_1:69506195-69506214 | Msa0039630:CDS | 30.0% | |
| TAAGAAAGAGTTGCAGTTTA+TGG | + | chr1_1:69506240-69506259 | Msa0039630:CDS | 30.0% | |
| AAGAAAGAGTTGCAGTTTAT+GGG | + | chr1_1:69506241-69506260 | Msa0039630:CDS | 30.0% | |
| CAATTTGAAGGATTTGAAGA+GGG | - | chr1_1:69506295-69506314 | None:intergenic | 30.0% | |
| TCAATTTGAAGGATTTGAAG+AGG | - | chr1_1:69506296-69506315 | None:intergenic | 30.0% | |
| ATAACAAACCCTAACAATGG+TGG | - | chr1_1:69504979-69504998 | None:intergenic | 35.0% | |
| GACTAATTGAGAAATCGAAG+AGG | - | chr1_1:69505054-69505073 | None:intergenic | 35.0% | |
| CTGTTTACAAAACACGAAGT+AGG | + | chr1_1:69505130-69505149 | Msa0039630:intron | 35.0% | |
| GGTAATGAAAGAAGAGCTAA+CGG | + | chr1_1:69505394-69505413 | Msa0039630:CDS | 35.0% | |
| GATCAAGTTTCAATGTGTTC+TGG | + | chr1_1:69505797-69505816 | Msa0039630:CDS | 35.0% | |
| TTACTTACAACAGGCCATAA+TGG | - | chr1_1:69505905-69505924 | None:intergenic | 35.0% | |
| TTATGGCCTGTTGTAAGTAA+CGG | + | chr1_1:69505905-69505924 | Msa0039630:CDS | 35.0% | |
| ! | TAATGAATCAGCCACAGTTT+TGG | + | chr1_1:69505978-69505997 | Msa0039630:CDS | 35.0% |
| ! | AATGAATCAGCCACAGTTTT+GGG | + | chr1_1:69505979-69505998 | Msa0039630:CDS | 35.0% |
| !! | ACATTAAAAAATGGTGCTGC+AGG | - | chr1_1:69506010-69506029 | None:intergenic | 35.0% |
| !! | TAAGCAGTAGAAGCATTTGA+AGG | - | chr1_1:69506085-69506104 | None:intergenic | 35.0% |
| TTCCAATGCTTCATCTACTT+TGG | + | chr1_1:69506111-69506130 | Msa0039630:CDS | 35.0% | |
| GAAGTTACTGAACTCAAACT+AGG | - | chr1_1:69506139-69506158 | None:intergenic | 35.0% | |
| CTACAAATACTCAGATGCTA+AGG | + | chr1_1:69506194-69506213 | Msa0039630:CDS | 35.0% | |
| ! | GATGCTAAGGGATTTTTCAT+TGG | + | chr1_1:69506207-69506226 | Msa0039630:CDS | 35.0% |
| ATAACAAACCCTAACAATGG+TGG | - | chr1_1:69504979-69504998 | None:intergenic | 35.0% | |
| GACTAATTGAGAAATCGAAG+AGG | - | chr1_1:69505054-69505073 | None:intergenic | 35.0% | |
| CTGTTTACAAAACACGAAGT+AGG | + | chr1_1:69505130-69505149 | Msa0039630:intron | 35.0% | |
| GGTAATGAAAGAAGAGCTAA+CGG | + | chr1_1:69505394-69505413 | Msa0039630:CDS | 35.0% | |
| GATCAAGTTTCAATGTGTTC+TGG | + | chr1_1:69505797-69505816 | Msa0039630:CDS | 35.0% | |
| TTACTTACAACAGGCCATAA+TGG | - | chr1_1:69505905-69505924 | None:intergenic | 35.0% | |
| TTATGGCCTGTTGTAAGTAA+CGG | + | chr1_1:69505905-69505924 | Msa0039630:CDS | 35.0% | |
| ! | TAATGAATCAGCCACAGTTT+TGG | + | chr1_1:69505978-69505997 | Msa0039630:CDS | 35.0% |
| ! | AATGAATCAGCCACAGTTTT+GGG | + | chr1_1:69505979-69505998 | Msa0039630:CDS | 35.0% |
| !! | ACATTAAAAAATGGTGCTGC+AGG | - | chr1_1:69506010-69506029 | None:intergenic | 35.0% |
| !! | TAAGCAGTAGAAGCATTTGA+AGG | - | chr1_1:69506085-69506104 | None:intergenic | 35.0% |
| TTCCAATGCTTCATCTACTT+TGG | + | chr1_1:69506111-69506130 | Msa0039630:CDS | 35.0% | |
| GAAGTTACTGAACTCAAACT+AGG | - | chr1_1:69506139-69506158 | None:intergenic | 35.0% | |
| CTACAAATACTCAGATGCTA+AGG | + | chr1_1:69506194-69506213 | Msa0039630:CDS | 35.0% | |
| ! | GATGCTAAGGGATTTTTCAT+TGG | + | chr1_1:69506207-69506226 | Msa0039630:CDS | 35.0% |
| ! | TGACTGTGTTTGAAGCTTTC+AGG | - | chr1_1:69505096-69505115 | None:intergenic | 40.0% |
| ! | CAATACTGAAGTATCTCCGT+CGG | + | chr1_1:69505349-69505368 | Msa0039630:CDS | 40.0% |
| GAAAGAAGAGCTAACGGAAA+CGG | + | chr1_1:69505400-69505419 | Msa0039630:CDS | 40.0% | |
| CAGAATCTTTCAACTGACGA+GGG | + | chr1_1:69505553-69505572 | Msa0039630:CDS | 40.0% | |
| GAAGATTCCAACATCATCTC+CGG | + | chr1_1:69505700-69505719 | Msa0039630:CDS | 40.0% | |
| ! | GCTCTTCTTCTTCTTTTCAC+CGG | - | chr1_1:69505749-69505768 | None:intergenic | 40.0% |
| ! | GTATGCTGTTTGAGCAATTG+GGG | - | chr1_1:69505828-69505847 | None:intergenic | 40.0% |
| ! | CGTATGCTGTTTGAGCAATT+GGG | - | chr1_1:69505829-69505848 | None:intergenic | 40.0% |
| CCAATTGCTCAAACAGCATA+CGG | + | chr1_1:69505827-69505846 | Msa0039630:CDS | 40.0% | |
| ! | GTGGTGGTTTAGTTCCATTA+TGG | + | chr1_1:69505888-69505907 | Msa0039630:CDS | 40.0% |
| CTGTTGTAAGTAACGGTGTT+GGG | + | chr1_1:69505912-69505931 | Msa0039630:CDS | 40.0% | |
| ! | GAAGCATTTGAAGGTTCTTG+TGG | - | chr1_1:69506076-69506095 | None:intergenic | 40.0% |
| AGCCAAAGTAGATGAAGCAT+TGG | - | chr1_1:69506116-69506135 | None:intergenic | 40.0% | |
| CATCTGAGTATTTGTAGCAG+AGG | - | chr1_1:69506191-69506210 | None:intergenic | 40.0% | |
| GGGTTGTTCTTCTGCAAATT+TGG | + | chr1_1:69506261-69506280 | Msa0039630:CDS | 40.0% | |
| ! | TGACTGTGTTTGAAGCTTTC+AGG | - | chr1_1:69505096-69505115 | None:intergenic | 40.0% |
| ! | CAATACTGAAGTATCTCCGT+CGG | + | chr1_1:69505349-69505368 | Msa0039630:CDS | 40.0% |
| GAAAGAAGAGCTAACGGAAA+CGG | + | chr1_1:69505400-69505419 | Msa0039630:CDS | 40.0% | |
| CAGAATCTTTCAACTGACGA+GGG | + | chr1_1:69505553-69505572 | Msa0039630:CDS | 40.0% | |
| GAAGATTCCAACATCATCTC+CGG | + | chr1_1:69505700-69505719 | Msa0039630:CDS | 40.0% | |
| ! | GCTCTTCTTCTTCTTTTCAC+CGG | - | chr1_1:69505749-69505768 | None:intergenic | 40.0% |
| ! | GTATGCTGTTTGAGCAATTG+GGG | - | chr1_1:69505828-69505847 | None:intergenic | 40.0% |
| ! | CGTATGCTGTTTGAGCAATT+GGG | - | chr1_1:69505829-69505848 | None:intergenic | 40.0% |
| CCAATTGCTCAAACAGCATA+CGG | + | chr1_1:69505827-69505846 | Msa0039630:CDS | 40.0% | |
| ! | GTGGTGGTTTAGTTCCATTA+TGG | + | chr1_1:69505888-69505907 | Msa0039630:CDS | 40.0% |
| CTGTTGTAAGTAACGGTGTT+GGG | + | chr1_1:69505912-69505931 | Msa0039630:CDS | 40.0% | |
| ! | GAAGCATTTGAAGGTTCTTG+TGG | - | chr1_1:69506076-69506095 | None:intergenic | 40.0% |
| AGCCAAAGTAGATGAAGCAT+TGG | - | chr1_1:69506116-69506135 | None:intergenic | 40.0% | |
| CATCTGAGTATTTGTAGCAG+AGG | - | chr1_1:69506191-69506210 | None:intergenic | 40.0% | |
| GGGTTGTTCTTCTGCAAATT+TGG | + | chr1_1:69506261-69506280 | Msa0039630:CDS | 40.0% | |
| AGGATGGAAGTGAACCCTAA+CGG | + | chr1_1:69505290-69505309 | Msa0039630:intron | 45.0% | |
| ! | TTTGAACCGGCATCGGAATA+AGG | - | chr1_1:69505436-69505455 | None:intergenic | 45.0% |
| CGTCAGTTGAAAGATTCTGG+CGG | - | chr1_1:69505552-69505571 | None:intergenic | 45.0% | |
| CCTCGTCAGTTGAAAGATTC+TGG | - | chr1_1:69505555-69505574 | None:intergenic | 45.0% | |
| CCAGAATCTTTCAACTGACG+AGG | + | chr1_1:69505552-69505571 | Msa0039630:CDS | 45.0% | |
| AATCCGACGGAGAAACAATC+CGG | + | chr1_1:69505588-69505607 | Msa0039630:CDS | 45.0% | |
| ! | CAGCTTGTTCTAGTAACCAC+CGG | - | chr1_1:69505610-69505629 | None:intergenic | 45.0% |
| CCTTCTATCATCGAAGCTAC+CGG | + | chr1_1:69505632-69505651 | Msa0039630:CDS | 45.0% | |
| AATCTTCAACGTACCTCCGA+CGG | - | chr1_1:69505687-69505706 | None:intergenic | 45.0% | |
| ! | CCGTATGCTGTTTGAGCAAT+TGG | - | chr1_1:69505830-69505849 | None:intergenic | 45.0% |
| CCAACACCGTTACTTACAAC+AGG | - | chr1_1:69505914-69505933 | None:intergenic | 45.0% | |
| CCTGTTGTAAGTAACGGTGT+TGG | + | chr1_1:69505911-69505930 | Msa0039630:CDS | 45.0% | |
| ! | GGTGTTGGGTCTAATACAAC+AGG | + | chr1_1:69505926-69505945 | Msa0039630:CDS | 45.0% |
| AGGATGGAAGTGAACCCTAA+CGG | + | chr1_1:69505290-69505309 | Msa0039630:intron | 45.0% | |
| ! | TTTGAACCGGCATCGGAATA+AGG | - | chr1_1:69505436-69505455 | None:intergenic | 45.0% |
| CGTCAGTTGAAAGATTCTGG+CGG | - | chr1_1:69505552-69505571 | None:intergenic | 45.0% | |
| CCTCGTCAGTTGAAAGATTC+TGG | - | chr1_1:69505555-69505574 | None:intergenic | 45.0% | |
| CCAGAATCTTTCAACTGACG+AGG | + | chr1_1:69505552-69505571 | Msa0039630:CDS | 45.0% | |
| AATCCGACGGAGAAACAATC+CGG | + | chr1_1:69505588-69505607 | Msa0039630:CDS | 45.0% | |
| ! | CAGCTTGTTCTAGTAACCAC+CGG | - | chr1_1:69505610-69505629 | None:intergenic | 45.0% |
| CCTTCTATCATCGAAGCTAC+CGG | + | chr1_1:69505632-69505651 | Msa0039630:CDS | 45.0% | |
| AATCTTCAACGTACCTCCGA+CGG | - | chr1_1:69505687-69505706 | None:intergenic | 45.0% | |
| ! | CCGTATGCTGTTTGAGCAAT+TGG | - | chr1_1:69505830-69505849 | None:intergenic | 45.0% |
| CCAACACCGTTACTTACAAC+AGG | - | chr1_1:69505914-69505933 | None:intergenic | 45.0% | |
| CCTGTTGTAAGTAACGGTGT+TGG | + | chr1_1:69505911-69505930 | Msa0039630:CDS | 45.0% | |
| ! | GGTGTTGGGTCTAATACAAC+AGG | + | chr1_1:69505926-69505945 | Msa0039630:CDS | 45.0% |
| ATGGAAGTGAACCCTAACGG+CGG | + | chr1_1:69505293-69505312 | Msa0039630:CDS | 50.0% | |
| AAACATCATCGCCGCCGTTA+GGG | - | chr1_1:69505307-69505326 | None:intergenic | 50.0% | |
| AAAACATCATCGCCGCCGTT+AGG | - | chr1_1:69505308-69505327 | None:intergenic | 50.0% | |
| AGTATCTCCGTCGGAGACAA+CGG | + | chr1_1:69505358-69505377 | Msa0039630:CDS | 50.0% | |
| !! | CAACAGCCTTATTCCGATGC+CGG | + | chr1_1:69505427-69505446 | Msa0039630:CDS | 50.0% |
| GTCATCGTTTGAACCGGCAT+CGG | - | chr1_1:69505443-69505462 | None:intergenic | 50.0% | |
| GCCACTGTCATCGTTTGAAC+CGG | - | chr1_1:69505449-69505468 | None:intergenic | 50.0% | |
| GGTTCAAACGATGACAGTGG+CGG | + | chr1_1:69505448-69505467 | Msa0039630:CDS | 50.0% | |
| ATCGAAAGACCGTCACACGA+AGG | + | chr1_1:69505484-69505503 | Msa0039630:CDS | 50.0% | |
| TGGTCGGAGAATCAGGATTC+CGG | + | chr1_1:69505517-69505536 | Msa0039630:CDS | 50.0% | |
| TTTCAACTGACGAGGGAGCT+AGG | + | chr1_1:69505560-69505579 | Msa0039630:CDS | 50.0% | |
| GAGCTAGGTCACAAATCCGA+CGG | + | chr1_1:69505575-69505594 | Msa0039630:CDS | 50.0% | |
| CCGGTAGCTTCGATGATAGA+AGG | - | chr1_1:69505635-69505654 | None:intergenic | 50.0% | |
| !! | GGTGGTGGTAGTGGTGAAAA+TGG | + | chr1_1:69505866-69505885 | Msa0039630:CDS | 50.0% |
| !! | GGTGGTAGTGGTGAAAATGG+TGG | + | chr1_1:69505869-69505888 | Msa0039630:CDS | 50.0% |
| ! | GGTAGTGGTGAAAATGGTGG+TGG | + | chr1_1:69505872-69505891 | Msa0039630:CDS | 50.0% |
| GCAGGAATAGCCCAAAACTG+TGG | - | chr1_1:69505992-69506011 | None:intergenic | 50.0% | |
| ATGGAAGTGAACCCTAACGG+CGG | + | chr1_1:69505293-69505312 | Msa0039630:CDS | 50.0% | |
| AAACATCATCGCCGCCGTTA+GGG | - | chr1_1:69505307-69505326 | None:intergenic | 50.0% | |
| AAAACATCATCGCCGCCGTT+AGG | - | chr1_1:69505308-69505327 | None:intergenic | 50.0% | |
| AGTATCTCCGTCGGAGACAA+CGG | + | chr1_1:69505358-69505377 | Msa0039630:CDS | 50.0% | |
| !! | CAACAGCCTTATTCCGATGC+CGG | + | chr1_1:69505427-69505446 | Msa0039630:CDS | 50.0% |
| GTCATCGTTTGAACCGGCAT+CGG | - | chr1_1:69505443-69505462 | None:intergenic | 50.0% | |
| GCCACTGTCATCGTTTGAAC+CGG | - | chr1_1:69505449-69505468 | None:intergenic | 50.0% | |
| GGTTCAAACGATGACAGTGG+CGG | + | chr1_1:69505448-69505467 | Msa0039630:CDS | 50.0% | |
| ATCGAAAGACCGTCACACGA+AGG | + | chr1_1:69505484-69505503 | Msa0039630:CDS | 50.0% | |
| TGGTCGGAGAATCAGGATTC+CGG | + | chr1_1:69505517-69505536 | Msa0039630:CDS | 50.0% | |
| TTTCAACTGACGAGGGAGCT+AGG | + | chr1_1:69505560-69505579 | Msa0039630:CDS | 50.0% | |
| GAGCTAGGTCACAAATCCGA+CGG | + | chr1_1:69505575-69505594 | Msa0039630:CDS | 50.0% | |
| CCGGTAGCTTCGATGATAGA+AGG | - | chr1_1:69505635-69505654 | None:intergenic | 50.0% | |
| !! | GGTGGTGGTAGTGGTGAAAA+TGG | + | chr1_1:69505866-69505885 | Msa0039630:CDS | 50.0% |
| !! | GGTGGTAGTGGTGAAAATGG+TGG | + | chr1_1:69505869-69505888 | Msa0039630:CDS | 50.0% |
| ! | GGTAGTGGTGAAAATGGTGG+TGG | + | chr1_1:69505872-69505891 | Msa0039630:CDS | 50.0% |
| GCAGGAATAGCCCAAAACTG+TGG | - | chr1_1:69505992-69506011 | None:intergenic | 50.0% | |
| TGGGGCTCTCCACCATTGTT+AGG | + | chr1_1:69504967-69504986 | Msa0039630:CDS | 55.0% | |
| GGGGCTCTCCACCATTGTTA+GGG | + | chr1_1:69504968-69504987 | Msa0039630:CDS | 55.0% | |
| TCTTTCATTACCGCAGCCGC+AGG | - | chr1_1:69505386-69505405 | None:intergenic | 55.0% | |
| ! | GCCGGTTCAAACGATGACAG+TGG | + | chr1_1:69505445-69505464 | Msa0039630:CDS | 55.0% |
| TCAAACGATGACAGTGGCGG+CGG | + | chr1_1:69505451-69505470 | Msa0039630:CDS | 55.0% | |
| GAAAGACCGTCACACGAAGG+TGG | + | chr1_1:69505487-69505506 | Msa0039630:CDS | 55.0% | |
| ! | CCACCGGATTGTTTCTCCGT+CGG | - | chr1_1:69505594-69505613 | None:intergenic | 55.0% |
| ATCATCGAAGCTACCGGCAC+TGG | + | chr1_1:69505638-69505657 | Msa0039630:CDS | 55.0% | |
| AACATCATCTCCGGCGAGAC+CGG | + | chr1_1:69505709-69505728 | Msa0039630:CDS | 55.0% | |
| TTCACCACTACCACCACCAC+CGG | - | chr1_1:69505864-69505883 | None:intergenic | 55.0% | |
| TGGGGCTCTCCACCATTGTT+AGG | + | chr1_1:69504967-69504986 | Msa0039630:CDS | 55.0% | |
| GGGGCTCTCCACCATTGTTA+GGG | + | chr1_1:69504968-69504987 | Msa0039630:CDS | 55.0% | |
| TCTTTCATTACCGCAGCCGC+AGG | - | chr1_1:69505386-69505405 | None:intergenic | 55.0% | |
| ! | GCCGGTTCAAACGATGACAG+TGG | + | chr1_1:69505445-69505464 | Msa0039630:CDS | 55.0% |
| TCAAACGATGACAGTGGCGG+CGG | + | chr1_1:69505451-69505470 | Msa0039630:CDS | 55.0% | |
| GAAAGACCGTCACACGAAGG+TGG | + | chr1_1:69505487-69505506 | Msa0039630:CDS | 55.0% | |
| ! | CCACCGGATTGTTTCTCCGT+CGG | - | chr1_1:69505594-69505613 | None:intergenic | 55.0% |
| ATCATCGAAGCTACCGGCAC+TGG | + | chr1_1:69505638-69505657 | Msa0039630:CDS | 55.0% | |
| AACATCATCTCCGGCGAGAC+CGG | + | chr1_1:69505709-69505728 | Msa0039630:CDS | 55.0% | |
| TTCACCACTACCACCACCAC+CGG | - | chr1_1:69505864-69505883 | None:intergenic | 55.0% | |
| AGACCGTCACACGAAGGTGG+AGG | + | chr1_1:69505490-69505509 | Msa0039630:CDS | 60.0% | |
| GACCGTCACACGAAGGTGGA+GGG | + | chr1_1:69505491-69505510 | Msa0039630:CDS | 60.0% | |
| GTCCCTCCACCTTCGTGTGA+CGG | - | chr1_1:69505496-69505515 | None:intergenic | 60.0% | |
| AGGGACGTGGTCGGAGAATC+AGG | + | chr1_1:69505510-69505529 | Msa0039630:CDS | 60.0% | |
| CCGACGGAGAAACAATCCGG+TGG | + | chr1_1:69505591-69505610 | Msa0039630:CDS | 60.0% | |
| ! | TACCGGCACTGGAACTGTGC+CGG | + | chr1_1:69505649-69505668 | Msa0039630:CDS | 60.0% |
| ACCTCCGACGGAAACAGCGA+TGG | - | chr1_1:69505675-69505694 | None:intergenic | 60.0% | |
| GGTCTCGCCGGAGATGATGT+TGG | - | chr1_1:69505710-69505729 | None:intergenic | 60.0% | |
| ACCGGACGGTGAAGATGCTC+CGG | + | chr1_1:69505727-69505746 | Msa0039630:CDS | 60.0% | |
| ! | ACCGGAGCATCTTCACCGTC+CGG | - | chr1_1:69505731-69505750 | None:intergenic | 60.0% |
| AGACCGTCACACGAAGGTGG+AGG | + | chr1_1:69505490-69505509 | Msa0039630:CDS | 60.0% | |
| GACCGTCACACGAAGGTGGA+GGG | + | chr1_1:69505491-69505510 | Msa0039630:CDS | 60.0% | |
| GTCCCTCCACCTTCGTGTGA+CGG | - | chr1_1:69505496-69505515 | None:intergenic | 60.0% | |
| AGGGACGTGGTCGGAGAATC+AGG | + | chr1_1:69505510-69505529 | Msa0039630:CDS | 60.0% | |
| CCGACGGAGAAACAATCCGG+TGG | + | chr1_1:69505591-69505610 | Msa0039630:CDS | 60.0% | |
| ! | TACCGGCACTGGAACTGTGC+CGG | + | chr1_1:69505649-69505668 | Msa0039630:CDS | 60.0% |
| ACCTCCGACGGAAACAGCGA+TGG | - | chr1_1:69505675-69505694 | None:intergenic | 60.0% | |
| GGTCTCGCCGGAGATGATGT+TGG | - | chr1_1:69505710-69505729 | None:intergenic | 60.0% | |
| ACCGGACGGTGAAGATGCTC+CGG | + | chr1_1:69505727-69505746 | Msa0039630:CDS | 60.0% | |
| ! | ACCGGAGCATCTTCACCGTC+CGG | - | chr1_1:69505731-69505750 | None:intergenic | 60.0% |
| GCAGGCTCCGTTGTCTCCGA+CGG | - | chr1_1:69505368-69505387 | None:intergenic | 65.0% | |
| GTCGGAGACAACGGAGCCTG+CGG | + | chr1_1:69505367-69505386 | Msa0039630:CDS | 65.0% | |
| CACACGAAGGTGGAGGGACG+TGG | + | chr1_1:69505497-69505516 | Msa0039630:CDS | 65.0% | |
| CGAAGGTGGAGGGACGTGGT+CGG | + | chr1_1:69505501-69505520 | Msa0039630:CDS | 65.0% | |
| ATTCTGGCGGCGCATGTCGC+CGG | - | chr1_1:69505539-69505558 | None:intergenic | 65.0% | |
| CCGACGGAAACAGCGATGGC+CGG | - | chr1_1:69505671-69505690 | None:intergenic | 65.0% | |
| ! | CCGGCCATCGCTGTTTCCGT+CGG | + | chr1_1:69505668-69505687 | Msa0039630:CDS | 65.0% |
| ! | GCCATCGCTGTTTCCGTCGG+AGG | + | chr1_1:69505671-69505690 | Msa0039630:CDS | 65.0% |
| TCATCTCCGGCGAGACCGGA+CGG | + | chr1_1:69505713-69505732 | Msa0039630:CDS | 65.0% | |
| TCTTCACCGTCCGGTCTCGC+CGG | - | chr1_1:69505722-69505741 | None:intergenic | 65.0% | |
| !! | GCATACGGTGCCACCACCTC+CGG | + | chr1_1:69505842-69505861 | Msa0039630:CDS | 65.0% |
| ACTACCACCACCACCGGAGG+TGG | - | chr1_1:69505858-69505877 | None:intergenic | 65.0% | |
| !! | ACCTCCGGTGGTGGTGGTAG+TGG | + | chr1_1:69505857-69505876 | Msa0039630:CDS | 65.0% |
| ACCACTACCACCACCACCGG+AGG | - | chr1_1:69505861-69505880 | None:intergenic | 65.0% | |
| GCAGGCTCCGTTGTCTCCGA+CGG | - | chr1_1:69505368-69505387 | None:intergenic | 65.0% | |
| GTCGGAGACAACGGAGCCTG+CGG | + | chr1_1:69505367-69505386 | Msa0039630:CDS | 65.0% | |
| CACACGAAGGTGGAGGGACG+TGG | + | chr1_1:69505497-69505516 | Msa0039630:CDS | 65.0% | |
| CGAAGGTGGAGGGACGTGGT+CGG | + | chr1_1:69505501-69505520 | Msa0039630:CDS | 65.0% | |
| ATTCTGGCGGCGCATGTCGC+CGG | - | chr1_1:69505539-69505558 | None:intergenic | 65.0% | |
| CCGACGGAAACAGCGATGGC+CGG | - | chr1_1:69505671-69505690 | None:intergenic | 65.0% | |
| ! | CCGGCCATCGCTGTTTCCGT+CGG | + | chr1_1:69505668-69505687 | Msa0039630:CDS | 65.0% |
| ! | GCCATCGCTGTTTCCGTCGG+AGG | + | chr1_1:69505671-69505690 | Msa0039630:CDS | 65.0% |
| TCATCTCCGGCGAGACCGGA+CGG | + | chr1_1:69505713-69505732 | Msa0039630:CDS | 65.0% | |
| TCTTCACCGTCCGGTCTCGC+CGG | - | chr1_1:69505722-69505741 | None:intergenic | 65.0% | |
| !! | GCATACGGTGCCACCACCTC+CGG | + | chr1_1:69505842-69505861 | Msa0039630:CDS | 65.0% |
| ACTACCACCACCACCGGAGG+TGG | - | chr1_1:69505858-69505877 | None:intergenic | 65.0% | |
| !! | ACCTCCGGTGGTGGTGGTAG+TGG | + | chr1_1:69505857-69505876 | Msa0039630:CDS | 65.0% |
| ACCACTACCACCACCACCGG+AGG | - | chr1_1:69505861-69505880 | None:intergenic | 65.0% | |
| GACAACGGAGCCTGCGGCTG+CGG | + | chr1_1:69505373-69505392 | Msa0039630:CDS | 70.0% | |
| TGACAGTGGCGGCGGCGAAG+AGG | + | chr1_1:69505459-69505478 | Msa0039630:CDS | 70.0% | |
| GGCCGGCACAGTTCCAGTGC+CGG | - | chr1_1:69505654-69505673 | None:intergenic | 70.0% | |
| !! | TACGGTGCCACCACCTCCGG+TGG | + | chr1_1:69505845-69505864 | Msa0039630:CDS | 70.0% |
| ACCACCACCACCGGAGGTGG+TGG | - | chr1_1:69505855-69505874 | None:intergenic | 70.0% | |
| GACAACGGAGCCTGCGGCTG+CGG | + | chr1_1:69505373-69505392 | Msa0039630:CDS | 70.0% | |
| TGACAGTGGCGGCGGCGAAG+AGG | + | chr1_1:69505459-69505478 | Msa0039630:CDS | 70.0% | |
| GGCCGGCACAGTTCCAGTGC+CGG | - | chr1_1:69505654-69505673 | None:intergenic | 70.0% | |
| !! | TACGGTGCCACCACCTCCGG+TGG | + | chr1_1:69505845-69505864 | Msa0039630:CDS | 70.0% |
| ACCACCACCACCGGAGGTGG+TGG | - | chr1_1:69505855-69505874 | None:intergenic | 70.0% | |
| ! | GGTGCCACCACCTCCGGTGG+TGG | + | chr1_1:69505848-69505867 | Msa0039630:CDS | 75.0% |
| ! | GCCACCACCTCCGGTGGTGG+TGG | + | chr1_1:69505851-69505870 | Msa0039630:CDS | 75.0% |
| ! | GGTGCCACCACCTCCGGTGG+TGG | + | chr1_1:69505848-69505867 | Msa0039630:CDS | 75.0% |
| ! | GCCACCACCTCCGGTGGTGG+TGG | + | chr1_1:69505851-69505870 | Msa0039630:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_1 | gene | 69504964 | 69506315 | 69504964 | ID=Msa0039630;Name=Msa0039630 |
| chr1_1 | mRNA | 69504964 | 69506315 | 69504964 | ID=Msa0039630-mRNA-1;Parent=Msa0039630;Name=Msa0039630-mRNA-1;_AED=0.06;_eAED=0.06;_QI=0|0|0|1|0|0.33|3|0|364 |
| chr1_1 | exon | 69504964 | 69504993 | 69504964 | ID=Msa0039630-mRNA-1:exon:22740;Parent=Msa0039630-mRNA-1 |
| chr1_1 | exon | 69505091 | 69505131 | 69505091 | ID=Msa0039630-mRNA-1:exon:22741;Parent=Msa0039630-mRNA-1 |
| chr1_1 | exon | 69505292 | 69506315 | 69505292 | ID=Msa0039630-mRNA-1:exon:22742;Parent=Msa0039630-mRNA-1 |
| chr1_1 | CDS | 69504964 | 69504993 | 69504964 | ID=Msa0039630-mRNA-1:cds;Parent=Msa0039630-mRNA-1 |
| chr1_1 | CDS | 69505091 | 69505131 | 69505091 | ID=Msa0039630-mRNA-1:cds;Parent=Msa0039630-mRNA-1 |
| chr1_1 | CDS | 69505292 | 69506315 | 69505292 | ID=Msa0039630-mRNA-1:cds;Parent=Msa0039630-mRNA-1 |
| Gene Sequence |
| Protein sequence |
