Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0040600 | sp|Q9XIK6|SNL6_ARATH | 33.908 | 174 | 104 | 4 | 201 | 367 | 61 | 230 | 6.85e-17 | 87.0 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Gene ID | Type | Classification |
---|---|---|
Msa0040600 | TR | Others |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0040600 | MtrunA17_Chr1g0205831 | 71.845 | 206 | 30 | 2 | 222 | 427 | 2 | 179 | 2.02e-93 | 279 |
Msa0040600 | MtrunA17_Chr1g0205831 | 41.000 | 200 | 44 | 3 | 103 | 291 | 6 | 142 | 7.29e-35 | 127 |
Msa0040600 | MtrunA17_Chr1g0205831 | 36.913 | 149 | 40 | 2 | 73 | 167 | 4 | 152 | 5.55e-15 | 72.8 |
Msa0040600 | MtrunA17_Chr1g0205821 | 61.682 | 214 | 23 | 2 | 89 | 291 | 3 | 168 | 2.38e-76 | 235 |
Msa0040600 | MtrunA17_Chr1g0205821 | 60.000 | 185 | 47 | 2 | 210 | 379 | 1 | 173 | 3.32e-65 | 206 |
Msa0040600 | MtrunA17_Chr1g0205821 | 59.722 | 72 | 29 | 0 | 313 | 384 | 21 | 92 | 4.30e-20 | 87.4 |
Msa0040600 | MtrunA17_Chr1g0205821 | 49.425 | 87 | 33 | 1 | 91 | 166 | 91 | 177 | 5.41e-16 | 75.9 |
Msa0040600 | MtrunA17_Chr4g0075861 | 36.948 | 249 | 118 | 5 | 163 | 377 | 1 | 244 | 9.50e-36 | 135 |
Msa0040600 | MtrunA17_Chr4g0075861 | 34.263 | 251 | 110 | 6 | 89 | 293 | 2 | 243 | 4.78e-25 | 105 |
Msa0040600 | MtrunA17_Chr4g0075861 | 41.304 | 184 | 98 | 5 | 210 | 392 | 1 | 175 | 9.33e-24 | 102 |
Msa0040600 | MtrunA17_Chr4g0075971 | 37.600 | 250 | 115 | 7 | 163 | 377 | 1 | 244 | 8.32e-34 | 133 |
Msa0040600 | MtrunA17_Chr4g0075971 | 33.865 | 251 | 111 | 6 | 89 | 293 | 2 | 243 | 6.56e-24 | 104 |
Msa0040600 | MtrunA17_Chr4g0075971 | 42.703 | 185 | 94 | 7 | 210 | 392 | 1 | 175 | 1.07e-22 | 100 |
Msa0040600 | MtrunA17_Chr1g0206771 | 39.024 | 164 | 94 | 3 | 211 | 373 | 5 | 163 | 5.11e-29 | 112 |
Msa0040600 | MtrunA17_Chr1g0206771 | 34.091 | 132 | 69 | 2 | 95 | 215 | 12 | 136 | 2.87e-14 | 70.9 |
Msa0040600 | MtrunA17_Chr1g0205811 | 52.830 | 106 | 49 | 1 | 308 | 413 | 17 | 121 | 1.03e-27 | 106 |
Msa0040600 | MtrunA17_Chr1g0205811 | 61.250 | 80 | 29 | 1 | 214 | 291 | 4 | 83 | 3.24e-24 | 97.1 |
Msa0040600 | MtrunA17_Chr1g0205811 | 53.750 | 80 | 26 | 1 | 99 | 167 | 14 | 93 | 5.71e-19 | 82.4 |
Msa0040600 | MtrunA17_Chr3g0077891 | 39.645 | 169 | 93 | 3 | 220 | 379 | 6 | 174 | 6.62e-27 | 106 |
Msa0040600 | MtrunA17_Chr3g0077891 | 44.355 | 124 | 52 | 5 | 113 | 219 | 23 | 146 | 5.66e-16 | 75.5 |
Msa0040600 | MtrunA17_Chr3g0077941 | 39.881 | 168 | 93 | 3 | 220 | 379 | 6 | 173 | 2.54e-26 | 104 |
Msa0040600 | MtrunA17_Chr3g0077941 | 41.549 | 142 | 64 | 6 | 97 | 220 | 6 | 146 | 1.72e-15 | 74.3 |
Msa0040600 | MtrunA17_Chr1g0205801 | 59.740 | 77 | 31 | 0 | 215 | 291 | 5 | 81 | 1.04e-24 | 98.2 |
Msa0040600 | MtrunA17_Chr1g0205801 | 56.322 | 87 | 37 | 1 | 308 | 394 | 15 | 100 | 5.63e-23 | 93.2 |
Msa0040600 | MtrunA17_Chr1g0205801 | 54.839 | 93 | 31 | 1 | 92 | 173 | 5 | 97 | 2.54e-22 | 91.3 |
Msa0040600 | MtrunA17_Chr3g0077881 | 41.566 | 166 | 87 | 5 | 220 | 376 | 6 | 170 | 1.21e-24 | 99.8 |
Msa0040600 | MtrunA17_Chr3g0077881 | 42.742 | 124 | 54 | 5 | 113 | 219 | 23 | 146 | 8.66e-17 | 77.8 |
Msa0040600 | MtrunA17_Chr3g0077911 | 40.373 | 161 | 82 | 4 | 221 | 374 | 7 | 160 | 3.40e-21 | 89.7 |
Msa0040600 | MtrunA17_Chr3g0077911 | 33.158 | 190 | 66 | 4 | 107 | 284 | 13 | 153 | 7.16e-16 | 74.7 |
Msa0040600 | MtrunA17_Chr3g0077911 | 44.706 | 85 | 43 | 2 | 308 | 392 | 11 | 91 | 2.41e-14 | 70.5 |
Msa0040600 | MtrunA17_Chr3g0077861 | 39.752 | 161 | 83 | 4 | 221 | 374 | 7 | 160 | 1.17e-20 | 88.6 |
Msa0040600 | MtrunA17_Chr3g0077861 | 39.655 | 116 | 57 | 3 | 109 | 212 | 15 | 129 | 9.05e-13 | 66.2 |
Msa0040600 | MtrunA17_Chr7g0218891 | 33.161 | 193 | 114 | 5 | 210 | 393 | 1 | 187 | 1.34e-20 | 91.3 |
Msa0040600 | MtrunA17_Chr7g0218891 | 29.528 | 254 | 128 | 8 | 174 | 380 | 13 | 262 | 5.09e-19 | 86.7 |
Msa0040600 | MtrunA17_Chr7g0218891 | 28.405 | 257 | 129 | 8 | 88 | 291 | 2 | 256 | 2.38e-16 | 79.0 |
Msa0040600 | MtrunA17_Chr5g0415031 | 35.570 | 149 | 93 | 1 | 222 | 367 | 43 | 191 | 4.30e-19 | 90.1 |
Msa0040600 | MtrunA17_Chr5g0415031 | 36.975 | 119 | 64 | 1 | 97 | 204 | 41 | 159 | 1.24e-16 | 82.8 |
Msa0040600 | MtrunA17_Chr5g0415031 | 39.000 | 100 | 58 | 1 | 296 | 392 | 31 | 130 | 5.08e-13 | 71.2 |
Msa0040600 | MtrunA17_Chr8g0364231 | 36.601 | 153 | 86 | 3 | 222 | 367 | 42 | 190 | 1.63e-16 | 82.4 |
Msa0040600 | MtrunA17_Chr8g0364231 | 52.703 | 74 | 34 | 1 | 308 | 381 | 45 | 117 | 3.42e-14 | 75.1 |
Msa0040600 | MtrunA17_Chr8g0364231 | 30.909 | 165 | 90 | 3 | 97 | 250 | 40 | 191 | 4.90e-13 | 71.6 |
Msa0040600 | MtrunA17_Chr6g0452001 | 35.099 | 151 | 95 | 1 | 220 | 367 | 61 | 211 | 2.47e-16 | 81.6 |
Msa0040600 | MtrunA17_Chr6g0452001 | 28.485 | 165 | 94 | 3 | 97 | 250 | 61 | 212 | 1.85e-11 | 66.6 |
Msa0040600 | MtrunA17_Chr6g0452021 | 35.135 | 148 | 93 | 2 | 222 | 367 | 43 | 189 | 3.45e-16 | 80.5 |
Msa0040600 | MtrunA17_Chr6g0452021 | 30.061 | 163 | 88 | 5 | 99 | 250 | 43 | 190 | 6.69e-12 | 67.0 |
Msa0040600 | MtrunA17_Chr1g0209201 | 38.060 | 134 | 75 | 3 | 207 | 340 | 2 | 127 | 5.28e-16 | 74.7 |
Msa0040600 | MtrunA17_Chr1g0209201 | 35.172 | 145 | 68 | 6 | 88 | 220 | 9 | 139 | 1.40e-12 | 65.1 |
Msa0040600 | MtrunA17_Chr1g0206781 | 44.872 | 78 | 43 | 0 | 308 | 385 | 14 | 91 | 1.16e-15 | 73.2 |
Msa0040600 | MtrunA17_Chr1g0206781 | 35.593 | 118 | 53 | 2 | 223 | 340 | 12 | 106 | 1.02e-12 | 64.7 |
Msa0040600 | MtrunA17_Chr1g0206781 | 32.231 | 121 | 45 | 3 | 100 | 209 | 12 | 106 | 6.31e-11 | 59.7 |
Msa0040600 | MtrunA17_Chr1g0205861 | 52.381 | 63 | 30 | 0 | 222 | 284 | 16 | 78 | 2.27e-14 | 69.3 |
Msa0040600 | MtrunA17_Chr8g0364021 | 44.286 | 70 | 39 | 0 | 222 | 291 | 44 | 113 | 1.04e-11 | 64.7 |
Msa0040600 | MtrunA17_Chr3g0077811 | 46.053 | 76 | 40 | 1 | 217 | 291 | 8 | 83 | 2.24e-11 | 60.8 |
Msa0040600 | MtrunA17_Chr2g0328701 | 38.793 | 116 | 62 | 4 | 210 | 324 | 18 | 125 | 9.66e-11 | 59.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0040600 | AT1G27260.1 | 35.519 | 183 | 103 | 3 | 220 | 392 | 1 | 178 | 1.36e-22 | 95.9 |
Msa0040600 | AT1G27260.1 | 28.713 | 202 | 106 | 8 | 97 | 274 | 1 | 188 | 2.44e-11 | 63.5 |
Msa0040600 | AT1G24230.1 | 36.025 | 161 | 90 | 4 | 220 | 379 | 12 | 160 | 4.01e-21 | 92.4 |
Msa0040600 | AT1G10450.2 | 33.908 | 174 | 104 | 4 | 201 | 367 | 10 | 179 | 5.89e-18 | 87.0 |
Msa0040600 | AT1G10450.1 | 33.908 | 174 | 104 | 4 | 201 | 367 | 10 | 179 | 5.89e-18 | 87.0 |
Msa0040600 | AT1G10450.3 | 33.908 | 174 | 104 | 4 | 201 | 367 | 61 | 230 | 6.96e-18 | 87.0 |
Msa0040600 | AT5G15020.2 | 35.294 | 170 | 102 | 3 | 222 | 385 | 52 | 219 | 3.61e-17 | 84.7 |
Msa0040600 | AT5G15020.2 | 28.090 | 178 | 100 | 4 | 97 | 262 | 50 | 211 | 1.88e-12 | 70.1 |
Msa0040600 | AT5G15020.1 | 35.294 | 170 | 102 | 3 | 222 | 385 | 52 | 219 | 4.06e-17 | 84.7 |
Msa0040600 | AT5G15020.1 | 28.090 | 178 | 100 | 4 | 97 | 262 | 50 | 211 | 1.97e-12 | 70.1 |
Msa0040600 | AT3G01320.2 | 34.810 | 158 | 93 | 4 | 222 | 375 | 57 | 208 | 5.44e-16 | 81.3 |
Msa0040600 | AT3G01320.2 | 34.375 | 128 | 70 | 3 | 90 | 204 | 46 | 172 | 1.18e-11 | 67.4 |
Msa0040600 | AT3G01320.1 | 34.375 | 160 | 95 | 4 | 220 | 375 | 55 | 208 | 5.55e-16 | 81.3 |
Msa0040600 | AT3G01320.1 | 34.375 | 128 | 70 | 3 | 90 | 204 | 46 | 172 | 1.17e-11 | 67.4 |
Msa0040600 | AT1G24190.3 | 37.179 | 156 | 85 | 6 | 220 | 367 | 12 | 162 | 9.16e-16 | 80.5 |
Msa0040600 | AT1G24190.3 | 45.833 | 72 | 38 | 1 | 308 | 378 | 17 | 88 | 8.35e-11 | 64.7 |
Msa0040600 | AT1G24190.1 | 37.179 | 156 | 85 | 6 | 220 | 367 | 12 | 162 | 9.23e-16 | 80.5 |
Msa0040600 | AT1G24190.1 | 45.833 | 72 | 38 | 1 | 308 | 378 | 17 | 88 | 8.49e-11 | 64.7 |
Msa0040600 | AT1G24190.2 | 37.179 | 156 | 85 | 6 | 220 | 367 | 12 | 162 | 9.90e-16 | 80.5 |
Msa0040600 | AT1G24190.2 | 45.833 | 72 | 38 | 1 | 308 | 378 | 17 | 88 | 9.18e-11 | 64.7 |
Msa0040600 | AT1G70060.2 | 34.568 | 162 | 102 | 2 | 210 | 367 | 2 | 163 | 1.23e-15 | 80.1 |
Msa0040600 | AT1G70060.2 | 31.361 | 169 | 91 | 4 | 97 | 253 | 12 | 167 | 9.68e-14 | 73.9 |
Msa0040600 | AT1G70060.1 | 34.568 | 162 | 102 | 2 | 210 | 367 | 2 | 163 | 1.23e-15 | 80.1 |
Msa0040600 | AT1G70060.1 | 31.361 | 169 | 91 | 4 | 97 | 253 | 12 | 167 | 9.68e-14 | 73.9 |
Msa0040600 | AT1G24200.1 | 32.278 | 158 | 93 | 2 | 218 | 368 | 10 | 160 | 4.20e-15 | 73.9 |
Msa0040600 | AT1G24200.1 | 47.692 | 65 | 34 | 0 | 309 | 373 | 18 | 82 | 1.12e-11 | 64.3 |
Msa0040600 | AT1G59890.1 | 36.601 | 153 | 84 | 5 | 222 | 367 | 45 | 191 | 8.78e-14 | 74.3 |
Msa0040600 | AT1G59890.1 | 29.586 | 169 | 87 | 4 | 99 | 253 | 45 | 195 | 8.50e-12 | 67.8 |
Msa0040600 | AT1G59890.3 | 36.601 | 153 | 84 | 5 | 222 | 367 | 45 | 191 | 9.01e-14 | 73.9 |
Msa0040600 | AT1G59890.3 | 29.586 | 169 | 87 | 4 | 99 | 253 | 45 | 195 | 9.10e-12 | 67.8 |
Msa0040600 | AT1G59890.2 | 36.601 | 153 | 84 | 5 | 222 | 367 | 45 | 191 | 9.19e-14 | 73.9 |
Msa0040600 | AT1G59890.2 | 29.586 | 169 | 87 | 4 | 99 | 253 | 45 | 195 | 8.73e-12 | 67.8 |
Msa0040600 | AT1G59890.4 | 36.601 | 153 | 84 | 5 | 222 | 367 | 45 | 191 | 1.00e-13 | 73.9 |
Msa0040600 | AT1G59890.4 | 29.586 | 169 | 87 | 4 | 99 | 253 | 45 | 195 | 9.93e-12 | 67.8 |
Msa0040600 | AT1G24250.1 | 27.854 | 219 | 126 | 6 | 225 | 416 | 17 | 230 | 1.05e-13 | 71.2 |
Msa0040600 | AT1G23810.1 | 27.404 | 208 | 130 | 5 | 225 | 416 | 17 | 219 | 1.52e-13 | 70.5 |
Msa0040600 | AT1G27280.1 | 31.646 | 158 | 103 | 2 | 233 | 385 | 4 | 161 | 1.65e-12 | 67.0 |
Msa0040600 | AT1G27220.1 | 39.744 | 78 | 47 | 0 | 213 | 290 | 5 | 82 | 2.45e-12 | 65.9 |
Msa0040600 | AT5G15025.1 | 40.741 | 81 | 48 | 0 | 211 | 291 | 36 | 116 | 3.18e-12 | 63.9 |
Msa0040600 | AT5G15040.1 | 43.548 | 62 | 35 | 0 | 313 | 374 | 11 | 72 | 1.80e-11 | 60.5 |
Msa0040600 | AT5G15040.3 | 43.548 | 62 | 35 | 0 | 313 | 374 | 11 | 72 | 1.80e-11 | 60.5 |
Msa0040600 | AT5G15040.2 | 43.548 | 62 | 35 | 0 | 313 | 374 | 11 | 72 | 1.80e-11 | 60.5 |
Find 80 sgRNAs with CRISPR-Local
Find 1013 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ACTGCTGTTGCAAACGAATT+TGG | 0.114157 | 1_1:-70829132 | None:intergenic |
ATCCCAAAAGTAAATCTTTA+TGG | 0.176355 | 1_1:-70829278 | None:intergenic |
GTGAAACTCCTACAAGATTT+TGG | 0.194654 | 1_1:+70824563 | Msa0040600:CDS |
TGAAACTCCTACATGATTTC+AGG | 0.203193 | 1_1:+70828950 | Msa0040600:CDS |
GCTGATGAATTGGAGTTTAA+AGG | 0.213179 | 1_1:+70811973 | None:intergenic |
AACTCTTACATCAATTCTTT+TGG | 0.285232 | 1_1:-70824846 | None:intergenic |
CTGCTGTTGCAAACGAATTT+GGG | 0.300087 | 1_1:-70829131 | None:intergenic |
AACTCTTCTATCAATTCTTT+TGG | 0.305538 | 1_1:-70828974 | None:intergenic |
TGCTTCAGCTTCACCAATCT+TGG | 0.305827 | 1_1:-70815061 | None:intergenic |
GACTCTTCTATCAATTCTTT+TGG | 0.310378 | 1_1:-70824588 | None:intergenic |
AGACCATAAAGATTTACTTT+TGG | 0.326044 | 1_1:+70829275 | Msa0040600:CDS |
AAATCCACTCTTGCTAATAA+TGG | 0.348415 | 1_1:+70820110 | Msa0040600:CDS |
TGAAGCAATGACGTTTATAA+AGG | 0.363280 | 1_1:+70828879 | Msa0040600:CDS |
GCAACAATAAGCTGATGAAT+TGG | 0.369113 | 1_1:+70811963 | None:intergenic |
CGTCATTGCTTCACCAATCA+AGG | 0.390356 | 1_1:-70828869 | None:intergenic |
GGTTACATTTGAAGATAAGA+TGG | 0.406022 | 1_1:+70824781 | Msa0040600:CDS |
ATTAGCAAGAGTGGATTTGT+AGG | 0.408825 | 1_1:-70820105 | None:intergenic |
ACCAATCTTGGCATTTACTC+TGG | 0.415002 | 1_1:-70815049 | None:intergenic |
AGTTGCATTTCAAGATAAGA+TGG | 0.422713 | 1_1:+70829158 | Msa0040600:CDS |
AACTTGTGTTTCAAGATAAG+AGG | 0.425933 | 1_1:+70821999 | Msa0040600:CDS |
GGATTCATTTCCAGAGTTAT+CGG | 0.427892 | 1_1:+70820134 | Msa0040600:CDS |
TGATGCAATGGAGTTTATAA+AGG | 0.447186 | 1_1:+70821970 | Msa0040600:CDS |
AAGCTGTGTTTCAAGATAAG+AGG | 0.447897 | 1_1:+70824522 | Msa0040600:CDS |
CACCCTTGCATCGTCAATCA+AGG | 0.459246 | 1_1:-70824483 | None:intergenic |
ATGAACAGCTCAAGAAGAAC+AGG | 0.465556 | 1_1:+70824458 | Msa0040600:intron |
TTTCCAGAGTTATCGGAGAA+TGG | 0.467103 | 1_1:+70820141 | Msa0040600:CDS |
ACTTGTGTTTCAAGATAAGA+AGG | 0.472355 | 1_1:+70828909 | Msa0040600:CDS |
AGTTGTCAAAGATGGAGTTA+TGG | 0.472541 | 1_1:+70828993 | Msa0040600:CDS |
TTCAACATCTTCTTGCCAGC+AGG | 0.472583 | 1_1:+70829051 | Msa0040600:CDS |
AGTAGAACTAATCCCTTGAT+TGG | 0.477123 | 1_1:+70828856 | Msa0040600:CDS |
AGTCGTCAAAGAAGGAGTTA+TGG | 0.477577 | 1_1:+70824607 | Msa0040600:CDS |
ACATGAAATCCCACTTCCAT+TGG | 0.486277 | 1_1:+70824688 | Msa0040600:CDS |
CTTCTATTCTTCTTGCCACC+AGG | 0.488485 | 1_1:+70829087 | Msa0040600:CDS |
TCCAGAGTAAATGCCAAGAT+TGG | 0.492118 | 1_1:+70815048 | Msa0040600:CDS |
GATAGAAGAGTTGTCAAAGA+TGG | 0.492886 | 1_1:+70828985 | Msa0040600:CDS |
AATCAAGGGATTAGTTCTAC+TGG | 0.506014 | 1_1:-70828854 | None:intergenic |
GAAACTCCTACATGATTTCA+GGG | 0.508203 | 1_1:+70828951 | Msa0040600:CDS |
ACACAAAATCTCACTTCCAT+TGG | 0.512949 | 1_1:+70829323 | Msa0040600:CDS |
CAGAGTTATCGGAGAATGGA+AGG | 0.514686 | 1_1:+70820145 | Msa0040600:CDS |
GATAGAAGAGTCGTCAAAGA+AGG | 0.515587 | 1_1:+70824599 | Msa0040600:CDS |
AAATCATCATCCAATGGAAG+TGG | 0.515740 | 1_1:-70824698 | None:intergenic |
TTCAACATCTTCTTGCCACC+AGG | 0.516818 | 1_1:+70824665 | Msa0040600:CDS |
TCCGCCATTATTAGCAAGAG+TGG | 0.523436 | 1_1:-70820114 | None:intergenic |
GATGAACAACAAGGTGATGA+TGG | 0.529706 | 1_1:+70829351 | Msa0040600:CDS |
ACTTGTGTTTCAAGATAAGA+GGG | 0.530583 | 1_1:+70822000 | Msa0040600:CDS |
CTTCCATTCTCCGATAACTC+TGG | 0.533895 | 1_1:-70820144 | None:intergenic |
GTCCCTTGATTGACGATGCA+AGG | 0.537025 | 1_1:+70824480 | Msa0040600:CDS |
AGCTGTGTTTCAAGATAAGA+GGG | 0.537554 | 1_1:+70824523 | Msa0040600:CDS |
TTCAACACTTGGTTGCCAGC+AGG | 0.540074 | 1_1:+70829300 | Msa0040600:CDS |
CGATGCAAGGGTGTTTGTAA+AGG | 0.542038 | 1_1:+70824493 | Msa0040600:CDS |
AACGAATTTGGGAATAGAAG+TGG | 0.545086 | 1_1:-70829120 | None:intergenic |
TGAACTTCAAGTTGATGAAG+TGG | 0.554268 | 1_1:+70829437 | Msa0040600:CDS |
GATGCTGAACAACAAGGTGA+TGG | 0.558029 | 1_1:+70829399 | Msa0040600:CDS |
CTCCAGAAGAACAAAACCCT+TGG | 0.559303 | 1_1:+70821943 | Msa0040600:CDS |
CTCCATTGCATCACCAACCA+AGG | 0.561324 | 1_1:-70821960 | None:intergenic |
ACGAATTTGGGAATAGAAGT+GGG | 0.571692 | 1_1:-70829119 | None:intergenic |
ACCCTTGGTTGGTGATGCAA+TGG | 0.572570 | 1_1:+70821958 | Msa0040600:CDS |
AGTGGGATTTCATCTCCTGC+TGG | 0.573929 | 1_1:-70829066 | None:intergenic |
TGTTGTTCATCACCATCCAA+TGG | 0.575143 | 1_1:-70829339 | None:intergenic |
AAGGGCAGTGGCGTTTGTAG+TGG | 0.575633 | 1_1:+70820164 | Msa0040600:CDS |
ATCGGAGAATGGAAGGGCAG+TGG | 0.575943 | 1_1:+70820152 | Msa0040600:CDS |
AGAAGTGGGAATTCATGTCC+TGG | 0.583648 | 1_1:-70829105 | None:intergenic |
AGAAGAACAAAACCCTTGGT+TGG | 0.585689 | 1_1:+70821947 | Msa0040600:CDS |
GGAAGTGGGATTTCATGTCC+TGG | 0.588837 | 1_1:-70824683 | None:intergenic |
GTCATTGCTTCACCAATCAA+GGG | 0.590508 | 1_1:-70828868 | None:intergenic |
AAAATCTCACTTCCATTGGA+TGG | 0.592611 | 1_1:+70829327 | Msa0040600:CDS |
TCCCTTGATTGACGATGCAA+GGG | 0.593982 | 1_1:+70824481 | Msa0040600:CDS |
TCCACTCTTGCTAATAATGG+CGG | 0.595614 | 1_1:+70820113 | Msa0040600:CDS |
TGTTGTAAATCATCATCCAA+TGG | 0.600709 | 1_1:-70824704 | None:intergenic |
AATCATCATCCAATGGAAGT+GGG | 0.616288 | 1_1:-70824697 | None:intergenic |
ACCCTTGCATCGTCAATCAA+GGG | 0.616892 | 1_1:-70824482 | None:intergenic |
GGTGGCAAGAAGAATAGAAG+TGG | 0.618772 | 1_1:-70829084 | None:intergenic |
TCCATTGCATCACCAACCAA+GGG | 0.622798 | 1_1:-70821959 | None:intergenic |
CAGAAAGATGCTGAACAACA+AGG | 0.627330 | 1_1:+70829393 | Msa0040600:CDS |
AGAGTTATCGGAGAATGGAA+GGG | 0.649319 | 1_1:+70820146 | Msa0040600:CDS |
AGCGCTCGAAGATCGAGCAA+TGG | 0.658283 | 1_1:+70824739 | Msa0040600:CDS |
GTGGCAAGAAGAATAGAAGT+GGG | 0.680483 | 1_1:-70829083 | None:intergenic |
AGTGGGAATTCATGTCCTGG+TGG | 0.708807 | 1_1:-70829102 | None:intergenic |
AGTGGGATTTCATGTCCTGG+TGG | 0.734772 | 1_1:-70824680 | None:intergenic |
TTGGATGGTGATGAACAACA+AGG | 0.791947 | 1_1:+70829342 | Msa0040600:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAAAAAAAAAAAAAAAAAA+AGG | - | chr1_1:70813703-70813722 | None:intergenic | 0.0% |
!!! | TTTTTTTTTTTTTTTTTTTT+TGG | + | chr1_1:70813703-70813722 | Msa0040600:intron | 0.0% |
!!! | TTTTTTTTTTTTTTTTTTTT+GGG | + | chr1_1:70813703-70813722 | Msa0040600:intron | 0.0% |
!!! | ATAAATATTTTATTTATTTT+TGG | + | chr1_1:70816541-70816560 | Msa0040600:intron | 0.0% |
!!! | ATTTTTAATTTTTTTTAATA+GGG | - | chr1_1:70819145-70819164 | None:intergenic | 0.0% |
!!! | AATTTTTAATTTTTTTTAAT+AGG | - | chr1_1:70819144-70819163 | None:intergenic | 0.0% |
!!! | AATTTTTAATTTTTTTTAAT+AGG | + | chr1_1:70819144-70819163 | Msa0040600:intron | 0.0% |
!!! | ATTTTTAATTTTTTTTAATA+GGG | + | chr1_1:70819145-70819164 | Msa0040600:intron | 0.0% |
!!! | TTTTTTGTATTTCAAATTAA+TGG | + | chr1_1:70812748-70812767 | Msa0040600:intron | 10.0% |
!!! | TTAAAATAAAGTTTTTCATT+GGG | + | chr1_1:70813521-70813540 | Msa0040600:intron | 10.0% |
!! | ATTAAAAATATCATTCAAAT+AGG | - | chr1_1:70813600-70813619 | None:intergenic | 10.0% |
!!! | TCTTATTTAACAATATATAA+AGG | - | chr1_1:70813745-70813764 | None:intergenic | 10.0% |
!! | AGAAAAAATTACATAAAAAT+TGG | + | chr1_1:70814050-70814069 | Msa0040600:intron | 10.0% |
!! | GAAAAAATTACATAAAAATT+GGG | + | chr1_1:70814051-70814070 | Msa0040600:intron | 10.0% |
!! | AAAAAATTACATAAAAATTG+GGG | + | chr1_1:70814052-70814071 | Msa0040600:intron | 10.0% |
!!! | TTAATTCTAAAACTAATTAA+AGG | + | chr1_1:70814173-70814192 | Msa0040600:intron | 10.0% |
!! | ATTATATAAATATGTATATG+CGG | - | chr1_1:70816518-70816537 | None:intergenic | 10.0% |
!!! | TGTTTTTATTTTAATTTTTG+AGG | + | chr1_1:70816729-70816748 | Msa0040600:intron | 10.0% |
!! | ATAATCTGAAAAAAAATAAT+TGG | - | chr1_1:70817791-70817810 | None:intergenic | 10.0% |
!!! | TTTTAATTTTTTTTAATAGG+GGG | - | chr1_1:70819147-70819166 | None:intergenic | 10.0% |
!!! | TTTTAATTTTTTTTAATAGG+GGG | + | chr1_1:70819147-70819166 | Msa0040600:intron | 10.0% |
!!! | TTTTTACTTTTAAATCAATA+TGG | - | chr1_1:70821470-70821489 | None:intergenic | 10.0% |
!!! | GTTTTATTTATTTATTTTGA+GGG | + | chr1_1:70821503-70821522 | Msa0040600:intron | 10.0% |
!! | TAATTATATATTTAGCAATT+TGG | + | chr1_1:70823010-70823029 | Msa0040600:intron | 10.0% |
!!! | AAATATAAGTTATTATGTTT+TGG | + | chr1_1:70827638-70827657 | Msa0040600:intron | 10.0% |
!!! | AATATAAGTTATTATGTTTT+GGG | + | chr1_1:70827639-70827658 | Msa0040600:intron | 10.0% |
!! | TGAAATACAAAAAATTGTAA+AGG | - | chr1_1:70812742-70812761 | None:intergenic | 15.0% |
!!! | TTGTAATATTTAAGTTTTGA+AGG | + | chr1_1:70813155-70813174 | Msa0040600:intron | 15.0% |
!! | TTGTTTATTGTCAATAAAAA+CGG | - | chr1_1:70813390-70813409 | None:intergenic | 15.0% |
!!! | GTTAAAATAAAGTTTTTCAT+TGG | + | chr1_1:70813520-70813539 | Msa0040600:intron | 15.0% |
!! | TGATAAAATAGTTGAAATAA+AGG | + | chr1_1:70813637-70813656 | Msa0040600:intron | 15.0% |
!! | GATAAAATAGTTGAAATAAA+GGG | + | chr1_1:70813638-70813657 | Msa0040600:intron | 15.0% |
!!! | TAATATATTTTTTAACGCAA+GGG | + | chr1_1:70813877-70813896 | Msa0040600:intron | 15.0% |
!! | AAAAATTACATAAAAATTGG+GGG | + | chr1_1:70814053-70814072 | Msa0040600:intron | 15.0% |
!!! | AGAAATTAAGTTTTTTTTAG+AGG | - | chr1_1:70814310-70814329 | None:intergenic | 15.0% |
!! | ATTCATAAATAAAACATTGT+GGG | - | chr1_1:70814472-70814491 | None:intergenic | 15.0% |
!! | ATTTATTTATTTATGTAACG+TGG | - | chr1_1:70814519-70814538 | None:intergenic | 15.0% |
!!! | TTTAAATTTTTCCATTTTGT+AGG | - | chr1_1:70814714-70814733 | None:intergenic | 15.0% |
!!! | AATAGTTAGTTATAATTTGT+TGG | + | chr1_1:70814851-70814870 | Msa0040600:intron | 15.0% |
!!! | ATTTATACCTTTTGAATTTT+TGG | + | chr1_1:70814953-70814972 | Msa0040600:intron | 15.0% |
!! | TTGAATATTTGATTGAATTA+CGG | + | chr1_1:70815907-70815926 | Msa0040600:intron | 15.0% |
!!! | CATTTTGAAACAATTTTTTT+TGG | - | chr1_1:70821080-70821099 | None:intergenic | 15.0% |
!! | TTATATAAATATGTATATGC+GGG | - | chr1_1:70816517-70816536 | None:intergenic | 15.0% |
!!! | TTAATTTTTGAGGAATATTT+TGG | + | chr1_1:70816739-70816758 | Msa0040600:intron | 15.0% |
!!! | ATTTTGGATGTTTTTTTATT+TGG | + | chr1_1:70816755-70816774 | Msa0040600:intron | 15.0% |
!!! | AGTTGCTTTAAAAAAAAAAT+TGG | + | chr1_1:70816807-70816826 | Msa0040600:intron | 15.0% |
!!! | CAAACAAACAAATATTTTTT+TGG | + | chr1_1:70817131-70817150 | Msa0040600:intron | 15.0% |
!! | TAATTTAGAAAATGATTATC+TGG | - | chr1_1:70818110-70818129 | None:intergenic | 15.0% |
!! | TAGTAGATTAGTAAAAAAAA+AGG | - | chr1_1:70819221-70819240 | None:intergenic | 15.0% |
!!! | TTACATATTTTTTTACTGAA+GGG | + | chr1_1:70819621-70819640 | Msa0040600:intron | 15.0% |
!!! | ATAAAAAATGACAAGTTTTT+TGG | + | chr1_1:70820503-70820522 | Msa0040600:intron | 15.0% |
!! | AATAGTTAATAAGGATAATT+TGG | - | chr1_1:70820954-70820973 | None:intergenic | 15.0% |
!! | AAATTATCCTTATTAACTAT+TGG | + | chr1_1:70820953-70820972 | Msa0040600:intron | 15.0% |
!!! | CATTTTGAAACAATTTTTTT+TGG | + | chr1_1:70821080-70821099 | Msa0040600:intron | 15.0% |
!!! | TTTTTTTTTAAATAGCCTTT+AGG | + | chr1_1:70821167-70821186 | Msa0040600:intron | 15.0% |
!! | AAAGTAAAAATAAAAGTGAA+AGG | + | chr1_1:70821480-70821499 | Msa0040600:intron | 15.0% |
!! | AAGTAAAAATAAAAGTGAAA+GGG | + | chr1_1:70821481-70821500 | Msa0040600:intron | 15.0% |
!!! | GGTTTTATTTATTTATTTTG+AGG | + | chr1_1:70821502-70821521 | Msa0040600:intron | 15.0% |
!!! | AACTCTTTTATTAATTCTTT+TGG | - | chr1_1:70822068-70822087 | None:intergenic | 15.0% |
!! | AGTAATAAAGAAATAGATTT+AGG | - | chr1_1:70823522-70823541 | None:intergenic | 15.0% |
!! | CTTTATTACTATTATAGTAT+AGG | + | chr1_1:70823532-70823551 | Msa0040600:intron | 15.0% |
!!! | CTTTTATCAATATGTTATAA+CGG | + | chr1_1:70823726-70823745 | Msa0040600:intron | 15.0% |
!! | CAAAATTTATTATGAAGATA+TGG | + | chr1_1:70825749-70825768 | Msa0040600:intron | 15.0% |
!! | ATATAACTTACCAAAAAAAA+AGG | + | chr1_1:70826288-70826307 | Msa0040600:intron | 15.0% |
!!! | AGTGTTTATATAATTCATTT+TGG | - | chr1_1:70826442-70826461 | None:intergenic | 15.0% |
!!! | TAAGGTTTTTAAAAAATGTA+TGG | + | chr1_1:70827552-70827571 | Msa0040600:intron | 15.0% |
!! | TTTATATGGATAAAAAACAT+AGG | - | chr1_1:70827901-70827920 | None:intergenic | 15.0% |
!!! | TTTAATTTGTTTTTAAAACC+CGG | - | chr1_1:70828031-70828050 | None:intergenic | 15.0% |
!! | AAAACAAAACAAAACAAAAT+TGG | - | chr1_1:70828269-70828288 | None:intergenic | 15.0% |
!! | GTTTCAAAATTTAAAAAAAC+AGG | + | chr1_1:70828314-70828333 | Msa0040600:intron | 15.0% |
!! | GTAAAATATAATATAAGTGT+TGG | - | chr1_1:70828390-70828409 | None:intergenic | 15.0% |
!!! | TATAAAATGACAGCTTTTTT+TGG | + | chr1_1:70812042-70812061 | Msa0040600:intron | 20.0% |
!! | AATTGTAAAGGAGAAATAAA+GGG | - | chr1_1:70812730-70812749 | None:intergenic | 20.0% |
!! | AAATTGTAAAGGAGAAATAA+AGG | - | chr1_1:70812731-70812750 | None:intergenic | 20.0% |
!!! | AACTTTTATCGAAAGAAAAA+CGG | - | chr1_1:70812831-70812850 | None:intergenic | 20.0% |
!!! | TGTTAACAGTTTAATTTGAT+GGG | + | chr1_1:70812999-70813018 | Msa0040600:intron | 20.0% |
!! | AATTAAGTGAATGCTAAAAT+TGG | + | chr1_1:70813455-70813474 | Msa0040600:intron | 20.0% |
!!! | ACCACAATATTTTTCATATA+AGG | + | chr1_1:70813498-70813517 | Msa0040600:intron | 20.0% |
!! | ACCTTATATGAAAAATATTG+TGG | - | chr1_1:70813502-70813521 | None:intergenic | 20.0% |
!! | CACAATAATATGAACAATAT+TGG | - | chr1_1:70813548-70813567 | None:intergenic | 20.0% |
!! | CAATATTGTTCATATTATTG+TGG | + | chr1_1:70813546-70813565 | Msa0040600:intron | 20.0% |
!! | CTTCGAAAAAATAGTTTAAT+TGG | - | chr1_1:70813784-70813803 | None:intergenic | 20.0% |
!! | CTTTCAAGAAAAGAAATAAT+AGG | - | chr1_1:70813847-70813866 | None:intergenic | 20.0% |
!! | TGCGTTAAAAAATATATTAG+TGG | - | chr1_1:70813876-70813895 | None:intergenic | 20.0% |
!!! | CTAATATATTTTTTAACGCA+AGG | + | chr1_1:70813876-70813895 | Msa0040600:intron | 20.0% |
!! | AAATGACATAAAAAAAAGAG+TGG | + | chr1_1:70813902-70813921 | Msa0040600:intron | 20.0% |
!!! | TTAGTTTTAGAATTAACTAG+AGG | - | chr1_1:70814169-70814188 | None:intergenic | 20.0% |
!! | GATTCATAAATAAAACATTG+TGG | - | chr1_1:70814473-70814492 | None:intergenic | 20.0% |
!! | TAACATATATTTGCAACATT+TGG | - | chr1_1:70814825-70814844 | None:intergenic | 20.0% |
!! | TAATTCTATAGATCAACTTA+AGG | - | chr1_1:70815426-70815445 | None:intergenic | 20.0% |
!! | TTGATCTATAGAATTATAAC+AGG | + | chr1_1:70815430-70815449 | Msa0040600:intron | 20.0% |
!! | CAAATATTCAATAGTAGTTA+GGG | - | chr1_1:70815898-70815917 | None:intergenic | 20.0% |
!! | TCAAATATTCAATAGTAGTT+AGG | - | chr1_1:70815899-70815918 | None:intergenic | 20.0% |
!! | AGAAAAAGTTATTATTGCAT+TGG | - | chr1_1:70821040-70821059 | None:intergenic | 20.0% |
!! | AAATTATCCTTGTTAACTAT+TGG | - | chr1_1:70816115-70816134 | None:intergenic | 20.0% |
!! | AATAGTTAACAAGGATAATT+TGG | + | chr1_1:70816114-70816133 | Msa0040600:intron | 20.0% |
!! | AATGATTAAAAGAAAGAGAA+TGG | - | chr1_1:70820920-70820939 | None:intergenic | 20.0% |
!! | TCTTTATGTATTAGTAAGAA+AGG | + | chr1_1:70816236-70816255 | Msa0040600:intron | 20.0% |
!! | GAAAGGAATAATATAAGATA+TGG | + | chr1_1:70816253-70816272 | Msa0040600:intron | 20.0% |
!!! | AAGGTTTTTAAGTTTTTGTT+TGG | + | chr1_1:70817100-70817119 | Msa0040600:intron | 20.0% |
!! | AGTTATTCTAAATATAGCAA+TGG | - | chr1_1:70817387-70817406 | None:intergenic | 20.0% |
!!! | AAAAAACAAAGCTTTAACTA+AGG | + | chr1_1:70817721-70817740 | Msa0040600:intron | 20.0% |
!! | AAAGTCTACTTAAGTAAAAA+TGG | - | chr1_1:70817900-70817919 | None:intergenic | 20.0% |
!!! | CTTAAGTAGACTTTTTTTTT+AGG | + | chr1_1:70817906-70817925 | Msa0040600:intron | 20.0% |
!! | AAATATAGTAATTATACACG+TGG | - | chr1_1:70818071-70818090 | None:intergenic | 20.0% |
!! | AAAAAACAAAAAAAAACGTG+AGG | + | chr1_1:70818160-70818179 | Msa0040600:intron | 20.0% |
!!! | TTTAGTTTTGATGATTTTTC+TGG | + | chr1_1:70818851-70818870 | Msa0040600:intron | 20.0% |
!!! | TTAGTTTTGATGATTTTTCT+GGG | + | chr1_1:70818852-70818871 | Msa0040600:intron | 20.0% |
!! | TAATTTATTAATTACACACG+TGG | + | chr1_1:70819046-70819065 | Msa0040600:intron | 20.0% |
!!! | CAGATTTTTTAAAATAGAGA+AGG | - | chr1_1:70819309-70819328 | None:intergenic | 20.0% |
!!! | CTTACATATTTTTTTACTGA+AGG | + | chr1_1:70819620-70819639 | Msa0040600:intron | 20.0% |
!! | AGAAAAAGTTATTATTGCAT+TGG | + | chr1_1:70821040-70821059 | Msa0040600:intron | 20.0% |
!!! | AAAAAAACAAATTTTTCGCA+AGG | - | chr1_1:70821153-70821172 | None:intergenic | 20.0% |
!!! | AGGATTTTATTTAAACACTA+AGG | + | chr1_1:70821536-70821555 | Msa0040600:intron | 20.0% |
!!! | GGATTTTATTTAAACACTAA+GGG | + | chr1_1:70821537-70821556 | Msa0040600:intron | 20.0% |
!!! | GATTTTATTTAAACACTAAG+GGG | + | chr1_1:70821538-70821557 | Msa0040600:intron | 20.0% |
!!! | ATTTTATTTAAACACTAAGG+GGG | + | chr1_1:70821539-70821558 | Msa0040600:intron | 20.0% |
!!! | TTCTATACCTTTTGAATTTT+GGG | + | chr1_1:70821879-70821898 | Msa0040600:intron | 20.0% |
!!! | AACTCTTATATCAATTCTTT+TGG | - | chr1_1:70822344-70822363 | None:intergenic | 20.0% |
!!! | ATCTAGTTCTTATAGTAAAA+TGG | - | chr1_1:70822852-70822871 | None:intergenic | 20.0% |
!!! | AATCTAAAACAAAAGTGAAA+GGG | - | chr1_1:70823637-70823656 | None:intergenic | 20.0% |
!!! | TAATCTAAAACAAAAGTGAA+AGG | - | chr1_1:70823638-70823657 | None:intergenic | 20.0% |
!!! | TTTGTATATATATAGCCTTT+TGG | + | chr1_1:70824110-70824129 | Msa0040600:intron | 20.0% |
!! | AACTGTGATAATTTAATGTT+TGG | + | chr1_1:70824402-70824421 | Msa0040600:intron | 20.0% |
!! | TGATAATTTAATGTTTGGTT+CGG | + | chr1_1:70824407-70824426 | Msa0040600:intron | 20.0% |
!!! | AGACCATAAAAATTTACTTT+TGG | + | chr1_1:70824898-70824917 | Msa0040600:intron | 20.0% |
!!! | GACCATAAAAATTTACTTTT+GGG | + | chr1_1:70824899-70824918 | Msa0040600:intron | 20.0% |
!!! | ATCCCAAAAGTAAATTTTTA+TGG | - | chr1_1:70824904-70824923 | None:intergenic | 20.0% |
!!! | CATCTTTTTTGTATTATGTA+AGG | - | chr1_1:70825222-70825241 | None:intergenic | 20.0% |
!! | CTTACATAATACAAAAAAGA+TGG | + | chr1_1:70825220-70825239 | Msa0040600:intron | 20.0% |
!!! | ACATTAATTAATGGATTGAT+TGG | + | chr1_1:70825411-70825430 | Msa0040600:intron | 20.0% |
!!! | AATTATTCTAACTTCAAGTT+AGG | + | chr1_1:70825826-70825845 | Msa0040600:intron | 20.0% |
!! | CTTAGATGAAAGAAATAATA+AGG | + | chr1_1:70825942-70825961 | Msa0040600:intron | 20.0% |
!! | AATAAGGTATGACATAAAAA+AGG | + | chr1_1:70825958-70825977 | Msa0040600:intron | 20.0% |
!! | ATAAGGTATGACATAAAAAA+GGG | + | chr1_1:70825959-70825978 | Msa0040600:intron | 20.0% |
!! | GATATAGTTTCATATTTGTT+TGG | - | chr1_1:70826106-70826125 | None:intergenic | 20.0% |
!! | ACAAATATGAAACTATATCT+AGG | + | chr1_1:70826107-70826126 | Msa0040600:intron | 20.0% |
!! | CAAATATGAAACTATATCTA+GGG | + | chr1_1:70826108-70826127 | Msa0040600:intron | 20.0% |
!!! | TTGGTAAGTTATATTGTTTT+TGG | - | chr1_1:70826282-70826301 | None:intergenic | 20.0% |
!!! | TTTTAAACTTGATTTTTGCT+TGG | - | chr1_1:70826327-70826346 | None:intergenic | 20.0% |
!!! | GTAAGACTAATTTTGTTTTT+GGG | - | chr1_1:70826592-70826611 | None:intergenic | 20.0% |
!!! | TGTAAGACTAATTTTGTTTT+TGG | - | chr1_1:70826593-70826612 | None:intergenic | 20.0% |
!! | TAATGATTTGAAAAGAAAGT+AGG | + | chr1_1:70827680-70827699 | Msa0040600:intron | 20.0% |
!! | TGTGACTTGAATAAAAAAAA+AGG | + | chr1_1:70827804-70827823 | Msa0040600:intron | 20.0% |
!! | ACTTGAATAAAAAAAAAGGT+AGG | + | chr1_1:70827808-70827827 | Msa0040600:intron | 20.0% |
!! | ATATATATTTGTATCATCGA+CGG | - | chr1_1:70828425-70828444 | None:intergenic | 20.0% |
!!! | TTTTTCTTTCTATTTGACAT+TGG | + | chr1_1:70828577-70828596 | Msa0040600:intron | 20.0% |
!!! | TTTCTATACCTTTTGAATTT+TGG | + | chr1_1:70828787-70828806 | Msa0040600:intron | 20.0% |
!!! | TTCTATACCTTTTGAATTTT+GGG | + | chr1_1:70821879-70821898 | Msa0040600:intron | 20.0% |
! | CTTTAAGTGTGTAATTGTTT+AGG | + | chr1_1:70812446-70812465 | Msa0040600:intron | 25.0% |
! | ACATAATTCACAATTCCTAT+CGG | - | chr1_1:70812612-70812631 | None:intergenic | 25.0% |
!!! | GTGTTAACAGTTTAATTTGA+TGG | + | chr1_1:70812998-70813017 | Msa0040600:intron | 25.0% |
!!! | TGTATTTACCCATTGTTTTA+AGG | + | chr1_1:70813086-70813105 | Msa0040600:intron | 25.0% |
!!! | GTATTTACCCATTGTTTTAA+GGG | + | chr1_1:70813087-70813106 | Msa0040600:intron | 25.0% |
! | AGTAAATCCCTTAAAACAAT+GGG | - | chr1_1:70813097-70813116 | None:intergenic | 25.0% |
! | TAGTAAATCCCTTAAAACAA+TGG | - | chr1_1:70813098-70813117 | None:intergenic | 25.0% |
! | TCAATAAAAACGGAAAAACA+TGG | - | chr1_1:70813380-70813399 | None:intergenic | 25.0% |
!! | AAAAAGGAATACACTCTTTT+GGG | - | chr1_1:70813688-70813707 | None:intergenic | 25.0% |
!! | AAAAAAGGAATACACTCTTT+TGG | - | chr1_1:70813689-70813708 | None:intergenic | 25.0% |
! | ACATAAAAAAAAGAGTGGTT+GGG | + | chr1_1:70813907-70813926 | Msa0040600:intron | 25.0% |
! | GACAATGCATAATATATGTA+AGG | - | chr1_1:70813947-70813966 | None:intergenic | 25.0% |
!! | ATTTTTGTATCACCCATTTT+GGG | - | chr1_1:70814122-70814141 | None:intergenic | 25.0% |
!! | AATTTTTGTATCACCCATTT+TGG | - | chr1_1:70814123-70814142 | None:intergenic | 25.0% |
!!! | TTTTAGAATTAACTAGAGGA+TGG | - | chr1_1:70814165-70814184 | None:intergenic | 25.0% |
! | TGATTCAAGTAAGAAATATG+AGG | - | chr1_1:70814422-70814441 | None:intergenic | 25.0% |
! | AAGCATTATTGTTTCACAAT+AGG | + | chr1_1:70814572-70814591 | Msa0040600:intron | 25.0% |
!!! | AGGTGTTTTAATAGTTTGTT+GGG | - | chr1_1:70814633-70814652 | None:intergenic | 25.0% |
!!! | TAGGTGTTTTAATAGTTTGT+TGG | - | chr1_1:70814634-70814653 | None:intergenic | 25.0% |
!! | ATTTTGTAGGTTATATTTGG+AGG | - | chr1_1:70814701-70814720 | None:intergenic | 25.0% |
! | TCCAAATATAACCTACAAAA+TGG | + | chr1_1:70814700-70814719 | Msa0040600:intron | 25.0% |
!! | TCCATTTTGTAGGTTATATT+TGG | - | chr1_1:70814704-70814723 | None:intergenic | 25.0% |
!!! | GTTAGTTATAATTTGTTGGT+AGG | + | chr1_1:70814855-70814874 | Msa0040600:intron | 25.0% |
!!! | TACCTTTTGAATTTTTGGTT+AGG | + | chr1_1:70814958-70814977 | Msa0040600:intron | 25.0% |
! | AACCTAACCAAAAATTCAAA+AGG | - | chr1_1:70814963-70814982 | None:intergenic | 25.0% |
!!! | GGTTAGGTTTTATTTTGAAT+TGG | + | chr1_1:70814974-70814993 | Msa0040600:intron | 25.0% |
! | TAGAATTATAACAGGTTCTT+TGG | + | chr1_1:70815438-70815457 | Msa0040600:intron | 25.0% |
! | CTAAATTGACACATAAGATA+TGG | - | chr1_1:70815546-70815565 | None:intergenic | 25.0% |
! | TCTTCAAAGTATACATACAA+CGG | - | chr1_1:70815582-70815601 | None:intergenic | 25.0% |
!!! | TTTTTTAGCATCTACTGAAT+AGG | - | chr1_1:70815787-70815806 | None:intergenic | 25.0% |
! | ATTCAGTAGATGCTAAAAAA+TGG | + | chr1_1:70815787-70815806 | Msa0040600:intron | 25.0% |
! | TGCTAAAAAATGGATATGAT+CGG | + | chr1_1:70815797-70815816 | Msa0040600:intron | 25.0% |
! | TTTGATTGAATTACGGAAAA+AGG | + | chr1_1:70815914-70815933 | Msa0040600:intron | 25.0% |
! | AAACTAACCAATAGTTAACA+AGG | + | chr1_1:70816105-70816124 | Msa0040600:intron | 25.0% |
! | TATAAGATATGGCAGAATTA+AGG | + | chr1_1:70816264-70816283 | Msa0040600:intron | 25.0% |
! | TGCATATACTGATGATATTA+GGG | + | chr1_1:70816330-70816349 | Msa0040600:intron | 25.0% |
! | CCTAAACCTAAAAACTAATA+CGG | + | chr1_1:70816603-70816622 | Msa0040600:intron | 25.0% |
!!! | CAATTACCGTATTAGTTTTT+AGG | - | chr1_1:70816612-70816631 | None:intergenic | 25.0% |
! | TGTAGTTCGTAAACTTATAA+AGG | - | chr1_1:70816646-70816665 | None:intergenic | 25.0% |
!! | GTCTTTTTATAATCAAAGTG+CGG | + | chr1_1:70816865-70816884 | Msa0040600:intron | 25.0% |
!! | TCTTTTTATAATCAAAGTGC+GGG | + | chr1_1:70816866-70816885 | Msa0040600:intron | 25.0% |
! | ATATGTATATCATCTAGAGA+TGG | - | chr1_1:70817048-70817067 | None:intergenic | 25.0% |
! | TTATAATCACACATCAATTG+CGG | + | chr1_1:70817288-70817307 | Msa0040600:intron | 25.0% |
!! | ATACTATGCATTTTACCAAT+TGG | + | chr1_1:70817546-70817565 | Msa0040600:intron | 25.0% |
!! | TACTATGCATTTTACCAATT+GGG | + | chr1_1:70817547-70817566 | Msa0040600:intron | 25.0% |
! | TGAAGAAAAATTGCAAAGAT+TGG | - | chr1_1:70818540-70818559 | None:intergenic | 25.0% |
! | CTACTAAAGTAGACTTAAAA+AGG | + | chr1_1:70819235-70819254 | Msa0040600:intron | 25.0% |
! | ATTGATGTAAACTAAACAGT+AGG | + | chr1_1:70819341-70819360 | Msa0040600:intron | 25.0% |
! | AATCTCATATACGATAGAAT+AGG | - | chr1_1:70819386-70819405 | None:intergenic | 25.0% |
! | AATATTGAATGTCGTGAAAA+CGG | - | chr1_1:70819416-70819435 | None:intergenic | 25.0% |
! | TCGAATCAAAAATAGTTGAT+TGG | - | chr1_1:70819544-70819563 | None:intergenic | 25.0% |
! | TGATTCGATCAGAAAATTAT+CGG | + | chr1_1:70819556-70819575 | Msa0040600:intron | 25.0% |
!!! | TTATCGGTTTTTTCCAATAA+AGG | + | chr1_1:70819572-70819591 | Msa0040600:intron | 25.0% |
!!! | TATCGGTTTTTTCCAATAAA+GGG | + | chr1_1:70819573-70819592 | Msa0040600:intron | 25.0% |
!! | TTTTCCAATAAAGGGTTTTA+TGG | + | chr1_1:70819581-70819600 | Msa0040600:intron | 25.0% |
!!! | GGGATTGAATATTTTTTGTT+AGG | - | chr1_1:70819721-70819740 | None:intergenic | 25.0% |
! | CTAAATCAATTCTATCGTTA+TGG | - | chr1_1:70820262-70820281 | None:intergenic | 25.0% |
!! | CATAACGATAGAATTGATTT+AGG | + | chr1_1:70820260-70820279 | Msa0040600:intron | 25.0% |
!!! | CATTTTTTATTTCTACACAC+AGG | - | chr1_1:70820493-70820512 | None:intergenic | 25.0% |
! | TAGTTTCAAAAGCAATACTT+TGG | + | chr1_1:70820977-70820996 | Msa0040600:intron | 25.0% |
! | TGACATGTATTTAAGAATAG+AGG | + | chr1_1:70821414-70821433 | Msa0040600:intron | 25.0% |
! | GACATGTATTTAAGAATAGA+GGG | + | chr1_1:70821415-70821434 | Msa0040600:intron | 25.0% |
!!! | ATTTTGAGGGAAAAAATGAA+AGG | + | chr1_1:70821516-70821535 | Msa0040600:intron | 25.0% |
!! | TACGTATTTGGTTTCTTATT+TGG | + | chr1_1:70821652-70821671 | Msa0040600:intron | 25.0% |
! | ACTTATTGTAATACAAACTC+AGG | + | chr1_1:70821713-70821732 | Msa0040600:intron | 25.0% |
!! | CAAAATTCAAAAGGTATAGA+AGG | - | chr1_1:70821880-70821899 | None:intergenic | 25.0% |
!! | CTTCTATACCTTTTGAATTT+TGG | + | chr1_1:70821878-70821897 | Msa0040600:intron | 25.0% |
! | AATAAAAGAGTTGTCAAAGA+AGG | + | chr1_1:70822076-70822095 | Msa0040600:intron | 25.0% |
! | AAGTTGCATTTCAAAATAAG+AGG | + | chr1_1:70822275-70822294 | Msa0040600:intron | 25.0% |
! | AGTTGCATTTCAAAATAAGA+GGG | + | chr1_1:70822276-70822295 | Msa0040600:intron | 25.0% |
!!! | GTTTTATTCTACTGAAGAAT+TGG | - | chr1_1:70822612-70822631 | None:intergenic | 25.0% |
!! | TCGATTAGTTGTCAAAAAAA+TGG | + | chr1_1:70822888-70822907 | Msa0040600:intron | 25.0% |
! | CAGTAGTTCAATAGTAAATA+GGG | - | chr1_1:70823048-70823067 | None:intergenic | 25.0% |
! | TCAGTAGTTCAATAGTAAAT+AGG | - | chr1_1:70823049-70823068 | None:intergenic | 25.0% |
! | ATGAATTTAAGTCTACCAAT+GGG | - | chr1_1:70823362-70823381 | None:intergenic | 25.0% |
! | AGTTTACCTATTTACTTGTT+TGG | + | chr1_1:70823807-70823826 | Msa0040600:intron | 25.0% |
!! | TTCATATGTCTTGTTGAATA+TGG | + | chr1_1:70823926-70823945 | Msa0040600:intron | 25.0% |
!! | AACTCTTACATCAATTCTTT+TGG | - | chr1_1:70824849-70824868 | None:intergenic | 25.0% |
!!! | GTCATTTTATAGATCAAACT+AGG | - | chr1_1:70825021-70825040 | None:intergenic | 25.0% |
! | AGTTTGATCTATAAAATGAC+AGG | + | chr1_1:70825021-70825040 | Msa0040600:intron | 25.0% |
! | AGCAGAATCACATTAATTAA+TGG | + | chr1_1:70825402-70825421 | Msa0040600:intron | 25.0% |
! | CAGCGATTAAATAGTAAATA+TGG | - | chr1_1:70825649-70825668 | None:intergenic | 25.0% |
! | TACTATTTAATCGCTGAAAA+AGG | + | chr1_1:70825653-70825672 | Msa0040600:intron | 25.0% |
! | TAAGGTATGACATAAAAAAG+GGG | + | chr1_1:70825960-70825979 | Msa0040600:intron | 25.0% |
!!! | TTTTTGTTAAAGAGCATTTG+TGG | + | chr1_1:70826003-70826022 | Msa0040600:intron | 25.0% |
!!! | TAGCAAACTTCCTTTTTTTT+TGG | - | chr1_1:70826301-70826320 | None:intergenic | 25.0% |
! | AGAAATAAGTTAATGTTGTG+AGG | - | chr1_1:70826373-70826392 | None:intergenic | 25.0% |
! | TTGTAGGTTGTTCAAAAATA+AGG | - | chr1_1:70826678-70826697 | None:intergenic | 25.0% |
! | AAGCCAAATCATATGTAAAA+AGG | + | chr1_1:70826730-70826749 | Msa0040600:intron | 25.0% |
!! | GATCCTTTTTACATATGATT+TGG | - | chr1_1:70826736-70826755 | None:intergenic | 25.0% |
! | CAGTTTATTAATTACACATG+AGG | - | chr1_1:70826773-70826792 | None:intergenic | 25.0% |
!!! | TTAGGAATATGTTTTTGTTG+GGG | - | chr1_1:70827272-70827291 | None:intergenic | 25.0% |
!!! | GTTAGGAATATGTTTTTGTT+GGG | - | chr1_1:70827273-70827292 | None:intergenic | 25.0% |
! | TAGATAAATCAAGACGATAT+CGG | - | chr1_1:70827295-70827314 | None:intergenic | 25.0% |
! | CTATTATGCATATTACCAAT+TGG | + | chr1_1:70827407-70827426 | Msa0040600:intron | 25.0% |
!!! | GGTTTTTAAAAAATGTATGG+AGG | + | chr1_1:70827555-70827574 | Msa0040600:intron | 25.0% |
! | TCTTGTGAACTTAACTTAAT+TGG | + | chr1_1:70827708-70827727 | Msa0040600:intron | 25.0% |
! | CAACATTTCATAATATTTGC+AGG | + | chr1_1:70827734-70827753 | Msa0040600:intron | 25.0% |
! | ATGGATAAAAAACATAGGAA+TGG | - | chr1_1:70827896-70827915 | None:intergenic | 25.0% |
! | TAAAGTGGGATCTATTTATA+TGG | - | chr1_1:70827915-70827934 | None:intergenic | 25.0% |
!! | AGCACTACATTTTGTTAATT+AGG | + | chr1_1:70828130-70828149 | Msa0040600:intron | 25.0% |
! | AAAACAAAACAAAATTGGAG+GGG | - | chr1_1:70828264-70828283 | None:intergenic | 25.0% |
! | CAAAACAAAACAAAATTGGA+GGG | - | chr1_1:70828265-70828284 | None:intergenic | 25.0% |
! | ACAAAACAAAACAAAATTGG+AGG | - | chr1_1:70828266-70828285 | None:intergenic | 25.0% |
!!! | GAATACTAGTTTTTGAAAAG+TGG | + | chr1_1:70828345-70828364 | Msa0040600:intron | 25.0% |
! | GTGGAAAATAATGAACATTA+AGG | + | chr1_1:70828364-70828383 | Msa0040600:intron | 25.0% |
!!! | ACGTGTGTGTTTTTATTTTA+TGG | - | chr1_1:70828482-70828501 | None:intergenic | 25.0% |
! | ATTGCACTACAATATTTGAA+GGG | - | chr1_1:70828555-70828574 | None:intergenic | 25.0% |
! | AATTGCACTACAATATTTGA+AGG | - | chr1_1:70828556-70828575 | None:intergenic | 25.0% |
!! | AACTCTTCTATCAATTCTTT+TGG | - | chr1_1:70828977-70828996 | None:intergenic | 25.0% |
!!! | GATTTTAGAGTTTTCAAAGA+AGG | + | chr1_1:70829234-70829253 | Msa0040600:CDS | 25.0% |
!! | AGACCATAAAGATTTACTTT+TGG | + | chr1_1:70829275-70829294 | Msa0040600:CDS | 25.0% |
!!! | GACCATAAAGATTTACTTTT+GGG | + | chr1_1:70829276-70829295 | Msa0040600:CDS | 25.0% |
! | ATCCCAAAAGTAAATCTTTA+TGG | - | chr1_1:70829281-70829300 | None:intergenic | 25.0% |
GATTACAATATCATGTCACT+AGG | + | chr1_1:70812013-70812032 | Msa0040600:intron | 30.0% | |
TGTTGTATGAAATAAAGTGC+AGG | + | chr1_1:70812090-70812109 | Msa0040600:intron | 30.0% | |
ATATCGTGTAATTAAGTTCG+CGG | + | chr1_1:70812366-70812385 | Msa0040600:intron | 30.0% | |
AGAAATAAAGGGAAACTGAA+GGG | - | chr1_1:70812719-70812738 | None:intergenic | 30.0% | |
CAATCTTCCATATTCAATCA+TGG | + | chr1_1:70812776-70812795 | Msa0040600:intron | 30.0% | |
TCTTTCGATAAAAGTTTGTG+CGG | + | chr1_1:70812835-70812854 | Msa0040600:intron | 30.0% | |
GGAAAATGCAAAGAATTCAA+AGG | + | chr1_1:70812868-70812887 | Msa0040600:intron | 30.0% | |
ATCTCCTTCAAATGAATTTG+TGG | + | chr1_1:70812902-70812921 | Msa0040600:intron | 30.0% | |
TCTCCTTCAAATGAATTTGT+GGG | + | chr1_1:70812903-70812922 | Msa0040600:intron | 30.0% | |
TTTCCCACAAATTCATTTGA+AGG | - | chr1_1:70812909-70812928 | None:intergenic | 30.0% | |
TGTGGGAAATATATAAAGCT+AGG | + | chr1_1:70812920-70812939 | Msa0040600:intron | 30.0% | |
TTTAGTGACAACTCAAGATA+AGG | + | chr1_1:70813059-70813078 | Msa0040600:intron | 30.0% | |
GAGTTATAACGAAATGACAA+AGG | - | chr1_1:70813263-70813282 | None:intergenic | 30.0% | |
GACATAAAAAAAAGAGTGGT+TGG | + | chr1_1:70813906-70813925 | Msa0040600:intron | 30.0% | |
CATAATATATGTAAGGTCTG+GGG | - | chr1_1:70813940-70813959 | None:intergenic | 30.0% | |
GCATAATATATGTAAGGTCT+GGG | - | chr1_1:70813941-70813960 | None:intergenic | 30.0% | |
TGCATAATATATGTAAGGTC+TGG | - | chr1_1:70813942-70813961 | None:intergenic | 30.0% | |
!! | TTGTGTAGTTTTACTGAGTT+AGG | - | chr1_1:70814086-70814105 | None:intergenic | 30.0% |
!! | CTAATTAAAGGTATTCGATG+CGG | + | chr1_1:70814185-70814204 | Msa0040600:intron | 30.0% |
! | ATCTTGTTGTCATTATTCCT+GGG | - | chr1_1:70814257-70814276 | None:intergenic | 30.0% |
! | TATCTTGTTGTCATTATTCC+TGG | - | chr1_1:70814258-70814277 | None:intergenic | 30.0% |
!!! | TTTTTTTAGAGGTGACATGT+AGG | - | chr1_1:70814299-70814318 | None:intergenic | 30.0% |
TGTTCATCTTTGATCTACTT+TGG | - | chr1_1:70814495-70814514 | None:intergenic | 30.0% | |
!! | TGATGATGGTGTAAGAAATT+TGG | - | chr1_1:70814657-70814676 | None:intergenic | 30.0% |
ATTTCTTACACCATCATCAT+TGG | + | chr1_1:70814658-70814677 | Msa0040600:intron | 30.0% | |
AGTGAAATTGTATGATTGAG+TGG | - | chr1_1:70814796-70814815 | None:intergenic | 30.0% | |
!!! | AGGTAGTTTGTTTTGTTAGA+AGG | + | chr1_1:70814875-70814894 | Msa0040600:intron | 30.0% |
! | AGAACTTCTGAAAGATTTCA+AGG | + | chr1_1:70815149-70815168 | Msa0040600:intron | 30.0% |
TCCTTGAATTGTTGTATGAA+AGG | + | chr1_1:70815474-70815493 | Msa0040600:intron | 30.0% | |
TCCTTTCATACAACAATTCA+AGG | - | chr1_1:70815478-70815497 | None:intergenic | 30.0% | |
TGTATGAAAGGAATTTCATG+AGG | + | chr1_1:70815486-70815505 | Msa0040600:intron | 30.0% | |
!! | AAGCGACACTCATTTTAAAA+CGG | - | chr1_1:70815962-70815981 | None:intergenic | 30.0% |
CTGCATATACTGATGATATT+AGG | + | chr1_1:70816329-70816348 | Msa0040600:intron | 30.0% | |
AAAAAATACCCACAATGGAT+AGG | + | chr1_1:70816387-70816406 | Msa0040600:intron | 30.0% | |
AAAAATACCCACAATGGATA+GGG | + | chr1_1:70816388-70816407 | Msa0040600:intron | 30.0% | |
TAATTACCCGCAAATTTAGA+TGG | + | chr1_1:70816449-70816468 | Msa0040600:intron | 30.0% | |
AATTACCCGCAAATTTAGAT+GGG | + | chr1_1:70816450-70816469 | Msa0040600:intron | 30.0% | |
!!! | CCGTATTAGTTTTTAGGTTT+AGG | - | chr1_1:70816606-70816625 | None:intergenic | 30.0% |
!!! | ATGGACATTTTTTACAAACG+CGG | + | chr1_1:70816976-70816995 | Msa0040600:intron | 30.0% |
CGGTAATAATTGTTTCAACT+AGG | + | chr1_1:70817185-70817204 | Msa0040600:intron | 30.0% | |
ATAAATCAGAGTAAAAGAGC+TGG | - | chr1_1:70817272-70817291 | None:intergenic | 30.0% | |
ATTGACAACCACAATATTGT+GGG | + | chr1_1:70817319-70817338 | Msa0040600:intron | 30.0% | |
TTACTGCATATATACCCAAT+TGG | - | chr1_1:70817564-70817583 | None:intergenic | 30.0% | |
!! | AAAAGGTTTGATTTGCAAAG+GGG | - | chr1_1:70819104-70819123 | None:intergenic | 30.0% |
!! | CAAAAGGTTTGATTTGCAAA+GGG | - | chr1_1:70819103-70819122 | None:intergenic | 30.0% |
!! | TCAAAAGGTTTGATTTGCAA+AGG | - | chr1_1:70818025-70818044 | None:intergenic | 30.0% |
!! | ACCTTTTGATCAATTTTGAC+CGG | + | chr1_1:70818036-70818055 | Msa0040600:intron | 30.0% |
GTTATTCAATAAAGAGGACT+TGG | - | chr1_1:70818281-70818300 | None:intergenic | 30.0% | |
! | GTTCTGGTTATTCAATAAAG+AGG | - | chr1_1:70818287-70818306 | None:intergenic | 30.0% |
!! | GTTTGGTTCTTTGATAATCA+AGG | + | chr1_1:70818717-70818736 | Msa0040600:intron | 30.0% |
! | GTTTAAAGAATGATGGTGAT+GGG | + | chr1_1:70818796-70818815 | Msa0040600:intron | 30.0% |
!! | TTTGATGATTTTTCTGGGTT+TGG | + | chr1_1:70818857-70818876 | Msa0040600:intron | 30.0% |
!! | CAAAAGGTTTGATTTGCAAA+GGG | + | chr1_1:70819103-70819122 | Msa0040600:intron | 30.0% |
!! | AAAAGGTTTGATTTGCAAAG+GGG | + | chr1_1:70819104-70819123 | Msa0040600:intron | 30.0% |
! | ACTAAACAGTAGGTTTTTGT+AGG | + | chr1_1:70819351-70819370 | Msa0040600:intron | 30.0% |
!!! | AAATGTTTTAACCCACAAAC+AGG | + | chr1_1:70819647-70819666 | Msa0040600:intron | 30.0% |
! | GTATTTTCGTCAGTTTGTAT+GGG | - | chr1_1:70819741-70819760 | None:intergenic | 30.0% |
TAGTGTGAGTTAACTCATAT+AGG | - | chr1_1:70819836-70819855 | None:intergenic | 30.0% | |
ATATGAGTTAACTCACACTA+AGG | + | chr1_1:70819836-70819855 | Msa0040600:intron | 30.0% | |
!!! | GTATTTTGGTCAGTTTGTAT+GGG | + | chr1_1:70819922-70819941 | Msa0040600:intron | 30.0% |
! | GATTTTTGATATAAGCAACC+CGG | + | chr1_1:70819973-70819992 | Msa0040600:intron | 30.0% |
CTTGTCACCAAATAGATAAA+AGG | + | chr1_1:70819996-70820015 | Msa0040600:intron | 30.0% | |
TCACCAAATAGATAAAAGGA+AGG | + | chr1_1:70820000-70820019 | Msa0040600:intron | 30.0% | |
! | CTTCCTTCCTTTTATCTATT+TGG | - | chr1_1:70820006-70820025 | None:intergenic | 30.0% |
CAAATAGATAAAAGGAAGGA+AGG | + | chr1_1:70820004-70820023 | Msa0040600:intron | 30.0% | |
AAATCCACTCTTGCTAATAA+TGG | + | chr1_1:70820110-70820129 | Msa0040600:CDS | 30.0% | |
! | GCATTTTTAATACTCACCAA+TGG | + | chr1_1:70820228-70820247 | Msa0040600:intron | 30.0% |
TCAATTCTATCGTTATGGTA+CGG | - | chr1_1:70820257-70820276 | None:intergenic | 30.0% | |
TTGAATCTCGCAATTAAATC+TGG | - | chr1_1:70820326-70820345 | None:intergenic | 30.0% | |
TCTTTATCATCATCATCCAA+TGG | - | chr1_1:70820382-70820401 | None:intergenic | 30.0% | |
GATGATGATAAAGAACAAAG+TGG | + | chr1_1:70820388-70820407 | Msa0040600:intron | 30.0% | |
TGTATGAAATGAACTTCATG+AGG | + | chr1_1:70820551-70820570 | Msa0040600:intron | 30.0% | |
CATACAATAGACACATAAGA+CGG | - | chr1_1:70820618-70820637 | None:intergenic | 30.0% | |
TTTGATCCTGCAAATATGAT+CGG | + | chr1_1:70820808-70820827 | Msa0040600:intron | 30.0% | |
!!! | AATATGATCGGTTTGAGTTT+TGG | + | chr1_1:70820820-70820839 | Msa0040600:intron | 30.0% |
!!! | TTCAAAATGAGTGTCGTTTT+AGG | + | chr1_1:70820872-70820891 | Msa0040600:intron | 30.0% |
! | TGTGCAGAGTATTAATTGAA+GGG | + | chr1_1:70821006-70821025 | Msa0040600:intron | 30.0% |
CATAAAAAAACTGAGCCTAA+AGG | - | chr1_1:70821185-70821204 | None:intergenic | 30.0% | |
!!! | GGCTCAGTTTTTTTATGATT+TGG | + | chr1_1:70821188-70821207 | Msa0040600:intron | 30.0% |
TATACACTATCCACATAGAA+CGG | - | chr1_1:70821220-70821239 | None:intergenic | 30.0% | |
! | ATGTATTGACATTTATGCAG+CGG | + | chr1_1:70821384-70821403 | Msa0040600:intron | 30.0% |
TATTTAAGAATAGAGGGAGT+AGG | + | chr1_1:70821421-70821440 | Msa0040600:intron | 30.0% | |
AATCAATATGGATCATGTTG+AGG | - | chr1_1:70821458-70821477 | None:intergenic | 30.0% | |
TTAGAAATTTGCATGCTTTG+TGG | + | chr1_1:70821567-70821586 | Msa0040600:intron | 30.0% | |
TAGAAATTTGCATGCTTTGT+GGG | + | chr1_1:70821568-70821587 | Msa0040600:intron | 30.0% | |
GAAACCAAATACGTAAATTG+AGG | - | chr1_1:70821647-70821666 | None:intergenic | 30.0% | |
TGATGCAATGGAGTTTATAA+AGG | + | chr1_1:70821970-70821989 | Msa0040600:CDS | 30.0% | |
AACTTGTGTTTCAAGATAAG+AGG | + | chr1_1:70821999-70822018 | Msa0040600:CDS | 30.0% | |
ACTTGTGTTTCAAGATAAGA+GGG | + | chr1_1:70822000-70822019 | Msa0040600:CDS | 30.0% | |
ACATGAAATCTCATTTCCAT+TGG | + | chr1_1:70822165-70822184 | Msa0040600:intron | 30.0% | |
! | TTTTGGCATTGTAATCAACT+AGG | - | chr1_1:70822327-70822346 | None:intergenic | 30.0% |
GATATAAGAGTTGTCAAAGA+AGG | + | chr1_1:70822352-70822371 | Msa0040600:intron | 30.0% | |
!! | AGAGCATCAAGATTTACTTT+TGG | + | chr1_1:70822393-70822412 | Msa0040600:intron | 30.0% |
!! | GAGCATCAAGATTTACTTTT+GGG | + | chr1_1:70822394-70822413 | Msa0040600:intron | 30.0% |
AGGTGATAGATTAACATTCA+AGG | + | chr1_1:70822480-70822499 | Msa0040600:intron | 30.0% | |
AATCCAAGAAAAGAGCAAAA+AGG | - | chr1_1:70822578-70822597 | None:intergenic | 30.0% | |
CACACTTTCTTATAGATTCA+TGG | - | chr1_1:70822964-70822983 | None:intergenic | 30.0% | |
GAAACACAAGATGTATATGA+AGG | + | chr1_1:70823074-70823093 | Msa0040600:intron | 30.0% | |
! | GAAAGAAGTATGATAATGTG+AGG | - | chr1_1:70823292-70823311 | None:intergenic | 30.0% |
GATGAATTTAAGTCTACCAA+TGG | - | chr1_1:70823363-70823382 | None:intergenic | 30.0% | |
TCAACAACATATTGAGTTTG+CGG | - | chr1_1:70823448-70823467 | None:intergenic | 30.0% | |
TTTGGACTTGATTCAAATTG+TGG | + | chr1_1:70823671-70823690 | Msa0040600:intron | 30.0% | |
TAGGTAAACTCATTGTAAGT+GGG | - | chr1_1:70823797-70823816 | None:intergenic | 30.0% | |
ATAGGTAAACTCATTGTAAG+TGG | - | chr1_1:70823798-70823817 | None:intergenic | 30.0% | |
!! | TTGTAACTGATTTTGCTTTG+TGG | + | chr1_1:70824081-70824100 | Msa0040600:intron | 30.0% |
! | TATATATATAGCCTTTTGGC+TGG | + | chr1_1:70824114-70824133 | Msa0040600:intron | 30.0% |
! | GACTCTTCTATCAATTCTTT+TGG | - | chr1_1:70824591-70824610 | None:intergenic | 30.0% |
TGTTGTAAATCATCATCCAA+TGG | - | chr1_1:70824707-70824726 | None:intergenic | 30.0% | |
! | AGCAATGGCATTTTTAACAA+CGG | + | chr1_1:70824754-70824773 | Msa0040600:CDS | 30.0% |
GGTTACATTTGAAGATAAGA+TGG | + | chr1_1:70824781-70824800 | Msa0040600:CDS | 30.0% | |
! | TTACATCAATTCTTTTGGCA+CGG | - | chr1_1:70824844-70824863 | None:intergenic | 30.0% |
CTATAAAATGACAGGTTCAT+TGG | + | chr1_1:70825029-70825048 | Msa0040600:intron | 30.0% | |
CAATCTAAGAAAAGAGCAAA+AGG | - | chr1_1:70825056-70825075 | None:intergenic | 30.0% | |
TTGATACAATTCTATGTACC+AGG | - | chr1_1:70825260-70825279 | None:intergenic | 30.0% | |
ATCATATGATTGTAGGTATC+AGG | - | chr1_1:70825441-70825460 | None:intergenic | 30.0% | |
TGATACCTACAATCATATGA+TGG | + | chr1_1:70825440-70825459 | Msa0040600:intron | 30.0% | |
AAGATCCATCATATGATTGT+AGG | - | chr1_1:70825448-70825467 | None:intergenic | 30.0% | |
!! | TGTGCAAAGTTTTCACTTTT+CGG | + | chr1_1:70825487-70825506 | Msa0040600:intron | 30.0% |
!! | CCAAATGATTCTAAGATAAC+CGG | + | chr1_1:70825551-70825570 | Msa0040600:intron | 30.0% |
ATACGTAACATTTAGCAGTA+TGG | + | chr1_1:70825605-70825624 | Msa0040600:intron | 30.0% | |
TCTTTCATCTAAGTGTTATG+CGG | - | chr1_1:70825935-70825954 | None:intergenic | 30.0% | |
!!! | ATAGTGCATGATAATGGTTT+TGG | - | chr1_1:70826047-70826066 | None:intergenic | 30.0% |
TCTTTATGAATGGGATTGAA+GGG | - | chr1_1:70826252-70826271 | None:intergenic | 30.0% | |
TTCTTTATGAATGGGATTGA+AGG | - | chr1_1:70826253-70826272 | None:intergenic | 30.0% | |
GGCTTCAATTCTTTATGAAT+GGG | - | chr1_1:70826261-70826280 | None:intergenic | 30.0% | |
TGGCTTCAATTCTTTATGAA+TGG | - | chr1_1:70826262-70826281 | None:intergenic | 30.0% | |
! | TGTATTTTCCGTGTTTTCTT+TGG | - | chr1_1:70826495-70826514 | None:intergenic | 30.0% |
AAATTATGTCACATTCGTTG+TGG | - | chr1_1:70826628-70826647 | None:intergenic | 30.0% | |
GGAATGTTCTATTATTCAGT+TGG | - | chr1_1:70826657-70826676 | None:intergenic | 30.0% | |
!! | ACTTTCTAATGTTACTTTGC+AGG | - | chr1_1:70827166-70827185 | None:intergenic | 30.0% |
!! | GGTTAGGAATATGTTTTTGT+TGG | - | chr1_1:70827274-70827293 | None:intergenic | 30.0% |
TGGAGTGTACAAAAACAAAA+AGG | - | chr1_1:70827336-70827355 | None:intergenic | 30.0% | |
TCTCATACATTTGGTCATTA+TGG | - | chr1_1:70827356-70827375 | None:intergenic | 30.0% | |
CAGAATGTATCTCATACATT+TGG | - | chr1_1:70827365-70827384 | None:intergenic | 30.0% | |
CATTCTGTTCACAAAGATAA+AGG | + | chr1_1:70827378-70827397 | Msa0040600:intron | 30.0% | |
TTACGACATATATAGCCAAT+TGG | - | chr1_1:70827425-70827444 | None:intergenic | 30.0% | |
TTCATAATATTTGCAGGAGT+CGG | + | chr1_1:70827740-70827759 | Msa0040600:intron | 30.0% | |
TTGCACTACAATATTTGAAG+GGG | - | chr1_1:70828554-70828573 | None:intergenic | 30.0% | |
! | ATGAATGTTGATGAGGTAAA+AGG | - | chr1_1:70828756-70828775 | None:intergenic | 30.0% |
AGATCATATGAATGTTGATG+AGG | - | chr1_1:70828763-70828782 | None:intergenic | 30.0% | |
TGAAGCAATGACGTTTATAA+AGG | + | chr1_1:70828879-70828898 | Msa0040600:CDS | 30.0% | |
ACTTGTGTTTCAAGATAAGA+AGG | + | chr1_1:70822000-70822019 | Msa0040600:CDS | 30.0% | |
AGTTGCATTTCAAGATAAGA+TGG | + | chr1_1:70829158-70829177 | Msa0040600:CDS | 30.0% | |
! | TAGAGTTTTCAAAGAAGGAA+TGG | + | chr1_1:70829239-70829258 | Msa0040600:CDS | 30.0% |
GTAATCTGCAAAGCATACAA+TGG | - | chr1_1:70812196-70812215 | None:intergenic | 35.0% | |
!! | TCTTTTTCTTATTTGCAGCC+TGG | + | chr1_1:70812485-70812504 | Msa0040600:intron | 35.0% |
GAAACTGAAGGGAACTTAAT+GGG | - | chr1_1:70812708-70812727 | None:intergenic | 35.0% | |
GAGAAATAAAGGGAAACTGA+AGG | - | chr1_1:70812720-70812739 | None:intergenic | 35.0% | |
ACAGACTCCATGATTGAATA+TGG | - | chr1_1:70812786-70812805 | None:intergenic | 35.0% | |
ATATTCAATCATGGAGTCTG+TGG | + | chr1_1:70812785-70812804 | Msa0040600:intron | 35.0% | |
TATTCAATCATGGAGTCTGT+GGG | + | chr1_1:70812786-70812805 | Msa0040600:intron | 35.0% | |
! | TAAAAGTTTGTGCGGTTTTG+AGG | + | chr1_1:70812843-70812862 | Msa0040600:intron | 35.0% |
! | GTTTTGCTAACGAATGTCTT+CGG | - | chr1_1:70813216-70813235 | None:intergenic | 35.0% |
GATTGTTCATCATGTTGTTG+TGG | + | chr1_1:70813568-70813587 | Msa0040600:intron | 35.0% | |
AGTGTATATCGACCCAAAAT+GGG | + | chr1_1:70814107-70814126 | Msa0040600:intron | 35.0% | |
! | TTGTGGGTTATGAATAAGAG+AGG | - | chr1_1:70814456-70814475 | None:intergenic | 35.0% |
GATGGTGTAAGAAATTTGGT+AGG | - | chr1_1:70814653-70814672 | None:intergenic | 35.0% | |
AGAGATGTATCCAATGATGA+TGG | - | chr1_1:70814671-70814690 | None:intergenic | 35.0% | |
AGGTTGTGGTTATAAACAGT+GGG | - | chr1_1:70814757-70814776 | None:intergenic | 35.0% | |
TAGGTTGTGGTTATAAACAG+TGG | - | chr1_1:70814758-70814777 | None:intergenic | 35.0% | |
AAAGAATGTGAGATAGGTTG+TGG | - | chr1_1:70814771-70814790 | None:intergenic | 35.0% | |
GTGGAAAAAGAATGTGAGAT+AGG | - | chr1_1:70814777-70814796 | None:intergenic | 35.0% | |
CAGCTTCTGTATCAATTCTT+TGG | - | chr1_1:70815176-70815195 | None:intergenic | 35.0% | |
ACATGAAATCTCACTTCCAT+TGG | + | chr1_1:70815272-70815291 | Msa0040600:intron | 35.0% | |
TGTTGTTGATCATCATCCAA+TGG | - | chr1_1:70815291-70815310 | None:intergenic | 35.0% | |
TTGGATGATGATCAACAACA+AGG | + | chr1_1:70815291-70815310 | Msa0040600:intron | 35.0% | |
! | CAGAATGATGATGAACTTCA+AGG | + | chr1_1:70815339-70815358 | Msa0040600:intron | 35.0% |
TGACAATGATAAGATCCTGT+AGG | - | chr1_1:70815834-70815853 | None:intergenic | 35.0% | |
!!! | GACACTCATTTTAAAACGGA+GGG | - | chr1_1:70815958-70815977 | None:intergenic | 35.0% |
! | TGTGCAGAGTATTAATTGGA+GGG | - | chr1_1:70816062-70816081 | None:intergenic | 35.0% |
! | GTAGTGTGCAGAGTATTAAT+TGG | - | chr1_1:70821002-70821021 | None:intergenic | 35.0% |
!! | TTCAAAATGAGCGTCGTTTT+AGG | - | chr1_1:70816195-70816214 | None:intergenic | 35.0% |
!! | AAACGACGCTCATTTTGAAA+CGG | + | chr1_1:70816196-70816215 | Msa0040600:intron | 35.0% |
!!! | GATAACCGTTTGCTTTTTTC+CGG | + | chr1_1:70816292-70816311 | Msa0040600:intron | 35.0% |
TTAGACCGGAAAAAAGCAAA+CGG | - | chr1_1:70816300-70816319 | None:intergenic | 35.0% | |
TGCAGATAGATACTTTAGAC+CGG | - | chr1_1:70816314-70816333 | None:intergenic | 35.0% | |
! | TGTTTTACCCTATCCATTGT+GGG | - | chr1_1:70816398-70816417 | None:intergenic | 35.0% |
!! | AAACACCGCTTTTATAGGTA+TGG | + | chr1_1:70816413-70816432 | Msa0040600:intron | 35.0% |
!! | AACACCGCTTTTATAGGTAT+GGG | + | chr1_1:70816414-70816433 | Msa0040600:intron | 35.0% |
TAAATTTGCGGGTAATTACC+CGG | - | chr1_1:70816447-70816466 | None:intergenic | 35.0% | |
TATAATCAAAGTGCGGGTAA+TGG | + | chr1_1:70816872-70816891 | Msa0040600:intron | 35.0% | |
!!! | TGGACATTTTTTACAAACGC+GGG | + | chr1_1:70816977-70816996 | Msa0040600:intron | 35.0% |
!!! | ATTTTTTACAAACGCGGGTA+TGG | + | chr1_1:70816982-70817001 | Msa0040600:intron | 35.0% |
!!! | TTTTTTACAAACGCGGGTAT+GGG | + | chr1_1:70816983-70817002 | Msa0040600:intron | 35.0% |
TATTATTGTACCCTACCCAT+TGG | + | chr1_1:70817012-70817031 | Msa0040600:intron | 35.0% | |
ATTATTGTACCCTACCCATT+GGG | + | chr1_1:70817013-70817032 | Msa0040600:intron | 35.0% | |
TATCATCTAGAGATGGCAAT+GGG | - | chr1_1:70817041-70817060 | None:intergenic | 35.0% | |
ATATCATCTAGAGATGGCAA+TGG | - | chr1_1:70817042-70817061 | None:intergenic | 35.0% | |
!!! | TTTTTTTGGTTTTGACCCTG+AGG | + | chr1_1:70817145-70817164 | Msa0040600:intron | 35.0% |
TTTCAACTAGGAATCGAACT+CGG | + | chr1_1:70817197-70817216 | Msa0040600:intron | 35.0% | |
ATTGTGGTTGTCAATGTATC+AGG | - | chr1_1:70817314-70817333 | None:intergenic | 35.0% | |
CATTGACAACCACAATATTG+TGG | + | chr1_1:70817318-70817337 | Msa0040600:intron | 35.0% | |
TTGACAACCACAATATTGTG+GGG | + | chr1_1:70817320-70817339 | Msa0040600:intron | 35.0% | |
ATGACGAACATTTCTGTTTG+AGG | - | chr1_1:70817699-70817718 | None:intergenic | 35.0% | |
TCGCAACATTGTCAAAGTTA+GGG | - | chr1_1:70819176-70819195 | None:intergenic | 35.0% | |
ATCGCAACATTGTCAAAGTT+AGG | - | chr1_1:70819175-70819194 | None:intergenic | 35.0% | |
! | CTTTGACAATGTTGCGATTT+TGG | + | chr1_1:70817954-70817973 | Msa0040600:intron | 35.0% |
!! | CCTTTTGATCAATTTTGACC+GGG | + | chr1_1:70818037-70818056 | Msa0040600:intron | 35.0% |
AAAAAAACGTGAGGAGAAGA+AGG | + | chr1_1:70818169-70818188 | Msa0040600:intron | 35.0% | |
AAAAAACGTGAGGAGAAGAA+GGG | + | chr1_1:70818170-70818189 | Msa0040600:intron | 35.0% | |
!! | GACTTTCATTTTTGTGGTTC+TGG | - | chr1_1:70818303-70818322 | None:intergenic | 35.0% |
!! | GATGTGGACTTTCATTTTTG+TGG | - | chr1_1:70818309-70818328 | None:intergenic | 35.0% |
AAGCTTGTCACATTGAAAAG+AGG | - | chr1_1:70818517-70818536 | None:intergenic | 35.0% | |
ATGAGGTTCGTAATTCTTCT+AGG | - | chr1_1:70818595-70818614 | None:intergenic | 35.0% | |
! | TTTAGGATTAGGTTTCTGTG+TGG | + | chr1_1:70818652-70818671 | Msa0040600:intron | 35.0% |
CAAGGTAATTTGAACGAAGA+TGG | + | chr1_1:70818735-70818754 | Msa0040600:intron | 35.0% | |
! | GGTTTAAAGAATGATGGTGA+TGG | + | chr1_1:70818795-70818814 | Msa0040600:intron | 35.0% |
!! | AATGATGGTGATGGGAAAAA+CGG | + | chr1_1:70818804-70818823 | Msa0040600:intron | 35.0% |
! | TGGGTTTGGATGAATTTTGT+GGG | + | chr1_1:70818871-70818890 | Msa0040600:intron | 35.0% |
! | GATGAATTTTGTGGGTTTTG+TGG | + | chr1_1:70818879-70818898 | Msa0040600:intron | 35.0% |
! | TGGATGAATTCTGGATTTTG+TGG | + | chr1_1:70818899-70818918 | Msa0040600:intron | 35.0% |
! | GGATGAATTCTGGATTTTGT+GGG | + | chr1_1:70818900-70818919 | Msa0040600:intron | 35.0% |
! | CCTTTGCAAATCAAACCTTT+TGG | - | chr1_1:70818022-70818041 | None:intergenic | 35.0% |
!! | CCAAAAGGTTTGATTTGCAA+AGG | + | chr1_1:70819102-70819121 | Msa0040600:intron | 35.0% |
! | CTTTGACAATGTTGCGATTT+TGG | - | chr1_1:70817954-70817973 | None:intergenic | 35.0% |
ATCGCAACATTGTCAAAGTT+AGG | + | chr1_1:70819175-70819194 | Msa0040600:intron | 35.0% | |
TCGCAACATTGTCAAAGTTA+GGG | + | chr1_1:70819176-70819195 | Msa0040600:intron | 35.0% | |
CATATACGATAGAATAGGTC+TGG | - | chr1_1:70819381-70819400 | None:intergenic | 35.0% | |
GACACCATAAAACCCTTTAT+TGG | - | chr1_1:70819588-70819607 | None:intergenic | 35.0% | |
! | GGTATTTTCGTCAGTTTGTA+TGG | - | chr1_1:70819742-70819761 | None:intergenic | 35.0% |
!!! | GGTATTTTGGTCAGTTTGTA+TGG | + | chr1_1:70819921-70819940 | Msa0040600:intron | 35.0% |
! | TTATCTATTTGGTGACAAGC+CGG | - | chr1_1:70819995-70820014 | None:intergenic | 35.0% |
TAGATAAAAGGAAGGAAGGT+TGG | + | chr1_1:70820008-70820027 | Msa0040600:intron | 35.0% | |
! | ATTAGCAAGAGTGGATTTGT+AGG | - | chr1_1:70820108-70820127 | None:intergenic | 35.0% |
GGATTCATTTCCAGAGTTAT+CGG | + | chr1_1:70820134-70820153 | Msa0040600:CDS | 35.0% | |
GATTTAGGTGTTCTCAAAGA+TGG | + | chr1_1:70820275-70820294 | Msa0040600:intron | 35.0% | |
!! | TGTTCTCAAAGATGGATTGA+TGG | + | chr1_1:70820283-70820302 | Msa0040600:intron | 35.0% |
!! | GATTGATGGCGTTGTTTAAA+GGG | + | chr1_1:70820297-70820316 | Msa0040600:intron | 35.0% |
GATGATAAAGAACAAAGTGG+TGG | + | chr1_1:70820391-70820410 | Msa0040600:intron | 35.0% | |
TTGATTACAATCCTGTGTGT+AGG | + | chr1_1:70820438-70820457 | Msa0040600:intron | 35.0% | |
TTATAGATCAACCTACACAC+AGG | - | chr1_1:70820452-70820471 | None:intergenic | 35.0% | |
CATGAGGAGTAGTAATATTC+AGG | + | chr1_1:70820567-70820586 | Msa0040600:intron | 35.0% | |
CAATCTCTGTCTTACATAAC+TGG | + | chr1_1:70820766-70820785 | Msa0040600:intron | 35.0% | |
TGTCTTACATAACTGGTAGT+AGG | + | chr1_1:70820773-70820792 | Msa0040600:intron | 35.0% | |
!!! | GACACTCATTTTGAAACGAA+GGG | - | chr1_1:70820867-70820886 | None:intergenic | 35.0% |
! | GTGTGCAGAGTATTAATTGA+AGG | + | chr1_1:70821005-70821024 | Msa0040600:intron | 35.0% |
!! | AAGCGACACTCATTTTGAAA+CGG | + | chr1_1:70821070-70821089 | Msa0040600:intron | 35.0% |
GTATAGAAGGAAGAGGTAAA+AGG | - | chr1_1:70821867-70821886 | None:intergenic | 35.0% | |
! | TCAAAAGGTATAGAAGGAAG+AGG | - | chr1_1:70821874-70821893 | None:intergenic | 35.0% |
AGCAGAACCCAAAATTCAAA+AGG | - | chr1_1:70821889-70821908 | None:intergenic | 35.0% | |
! | TTTTGGCACTGTAATCATGT+AGG | - | chr1_1:70822051-70822070 | None:intergenic | 35.0% |
AGTTGTCAAAGAAGGAGTTA+TGG | + | chr1_1:70822084-70822103 | Msa0040600:intron | 35.0% | |
TGAAATCTCATTTCCATTGG+AGG | + | chr1_1:70822168-70822187 | Msa0040600:intron | 35.0% | |
TGTTGTTCATCACTATCCAA+TGG | - | chr1_1:70822460-70822479 | None:intergenic | 35.0% | |
TTGGATAGTGATGAACAACA+AGG | + | chr1_1:70822460-70822479 | Msa0040600:intron | 35.0% | |
!!! | TGCAGAAGAAGAAGGTTTTT+TGG | + | chr1_1:70822551-70822570 | Msa0040600:intron | 35.0% |
ACACTCTGCAAAGTATACAA+TGG | - | chr1_1:70822704-70822723 | None:intergenic | 35.0% | |
CAACCGCATAGAAATTGTAT+CGG | + | chr1_1:70822758-70822777 | Msa0040600:intron | 35.0% | |
!! | CAGAAGGTATCTCATACATT+CGG | - | chr1_1:70823218-70823237 | None:intergenic | 35.0% |
ATGTGTAATATGTGAGCAGA+AGG | - | chr1_1:70823234-70823253 | None:intergenic | 35.0% | |
CAAAAACCAGTTTCTACCAA+GGG | - | chr1_1:70823322-70823341 | None:intergenic | 35.0% | |
ACAAAAACCAGTTTCTACCA+AGG | - | chr1_1:70823323-70823342 | None:intergenic | 35.0% | |
ACATCTGAGTTTGAATGAGT+TGG | - | chr1_1:70823393-70823412 | None:intergenic | 35.0% | |
! | TCAAACTCAGATGTTTTCCT+TGG | + | chr1_1:70823399-70823418 | Msa0040600:intron | 35.0% |
CTCACATTAGATATGTGCTT+TGG | - | chr1_1:70823576-70823595 | None:intergenic | 35.0% | |
!! | TGGGGTGATTTTGAAAATGT+CGG | - | chr1_1:70823778-70823797 | None:intergenic | 35.0% |
AGGTAAACTCATTGTAAGTG+GGG | - | chr1_1:70823796-70823815 | None:intergenic | 35.0% | |
GAGAGTCCAAACAAGTAAAT+AGG | - | chr1_1:70823816-70823835 | None:intergenic | 35.0% | |
TGTGGATAGCAAGTAATCAA+AGG | - | chr1_1:70824003-70824022 | None:intergenic | 35.0% | |
! | AAGTGAGTTACGATCAGTTT+TGG | + | chr1_1:70824047-70824066 | Msa0040600:intron | 35.0% |
TTGTCATTATTCCAGCCAAA+AGG | - | chr1_1:70824128-70824147 | None:intergenic | 35.0% | |
GTCTTTGTGAGAAAGTTCTA+AGG | + | chr1_1:70824194-70824213 | Msa0040600:intron | 35.0% | |
AAGCTGTGTTTCAAGATAAG+AGG | + | chr1_1:70824522-70824541 | Msa0040600:CDS | 35.0% | |
AGCTGTGTTTCAAGATAAGA+GGG | + | chr1_1:70824523-70824542 | Msa0040600:CDS | 35.0% | |
! | GTGAAACTCCTACAAGATTT+TGG | + | chr1_1:70824563-70824582 | Msa0040600:CDS | 35.0% |
AATCATCATCCAATGGAAGT+GGG | - | chr1_1:70824700-70824719 | None:intergenic | 35.0% | |
AAATCATCATCCAATGGAAG+TGG | - | chr1_1:70824701-70824720 | None:intergenic | 35.0% | |
! | GGCATTTTTAACAACGGTTA+AGG | + | chr1_1:70824760-70824779 | Msa0040600:CDS | 35.0% |
GATGTAAGAGTTGTCAAAGA+AGG | + | chr1_1:70824857-70824876 | Msa0040600:intron | 35.0% | |
AGTTGTCAAAGAAGGAATGA+TGG | + | chr1_1:70824865-70824884 | Msa0040600:intron | 35.0% | |
ACACAAAATCTCACTTCCAT+TGG | + | chr1_1:70824946-70824965 | Msa0040600:intron | 35.0% | |
AAAATCTCACTTCCATTGGA+TGG | + | chr1_1:70824950-70824969 | Msa0040600:intron | 35.0% | |
TATTGTTCATCACCATCCAA+TGG | - | chr1_1:70824965-70824984 | None:intergenic | 35.0% | |
ACAAGCTTGATTACAATCGT+CGG | + | chr1_1:70824985-70825004 | Msa0040600:intron | 35.0% | |
GCACTCTACAAAGTATACAA+TGG | - | chr1_1:70825160-70825179 | None:intergenic | 35.0% | |
!! | ATGGATATGATTTGTTGTCC+TGG | + | chr1_1:70825239-70825258 | Msa0040600:intron | 35.0% |
CCGGTTATCTTAGAATCATT+TGG | - | chr1_1:70825554-70825573 | None:intergenic | 35.0% | |
ATAGTGATTACTTTGCATGC+CGG | - | chr1_1:70825573-70825592 | None:intergenic | 35.0% | |
! | ATAAATTTTGCCTCCTCCAA+AGG | - | chr1_1:70825739-70825758 | None:intergenic | 35.0% |
AAGTGCTTCATTTGTGTTGT+AGG | - | chr1_1:70826185-70826204 | None:intergenic | 35.0% | |
! | TTGCTTTACTGTCTAGGATT+TGG | - | chr1_1:70826225-70826244 | None:intergenic | 35.0% |
GTCTGTCAGAAAGAAACAAA+AGG | + | chr1_1:70826518-70826537 | Msa0040600:intron | 35.0% | |
CAATGCTCAAACACTGAAAA+GGG | + | chr1_1:70826546-70826565 | Msa0040600:intron | 35.0% | |
! | TTTTGTGTGCTTGGAACATA+TGG | - | chr1_1:70826712-70826731 | None:intergenic | 35.0% |
TAATTACACATGAGGTCAGA+AGG | - | chr1_1:70826765-70826784 | None:intergenic | 35.0% | |
TAGGACAAGACAAAAACAAG+TGG | + | chr1_1:70826876-70826895 | Msa0040600:intron | 35.0% | |
AGGACAAGACAAAAACAAGT+GGG | + | chr1_1:70826877-70826896 | Msa0040600:intron | 35.0% | |
CAAAGATCGACACTTTCAAA+GGG | + | chr1_1:70827003-70827022 | Msa0040600:intron | 35.0% | |
AGCATAATTTGGACCTCATT+TGG | - | chr1_1:70827040-70827059 | None:intergenic | 35.0% | |
TCCAAATTATGCTGTAACTG+AGG | + | chr1_1:70827047-70827066 | Msa0040600:intron | 35.0% | |
ACCTCAGTTACAGCATAATT+TGG | - | chr1_1:70827051-70827070 | None:intergenic | 35.0% | |
! | AAATCAAGACGATATCGGTT+AGG | - | chr1_1:70827290-70827309 | None:intergenic | 35.0% |
TCATAATATTTGCAGGAGTC+GGG | + | chr1_1:70827741-70827760 | Msa0040600:intron | 35.0% | |
! | TCTCGAAAAGTAGAGTGTTT+GGG | - | chr1_1:70827775-70827794 | None:intergenic | 35.0% |
! | ATCTCGAAAAGTAGAGTGTT+TGG | - | chr1_1:70827776-70827795 | None:intergenic | 35.0% |
!!! | TGTTTTTAAAACCCGGAAGA+AGG | - | chr1_1:70828024-70828043 | None:intergenic | 35.0% |
AAATAGAACGTAGTGATGTG+AGG | + | chr1_1:70828048-70828067 | Msa0040600:intron | 35.0% | |
AACTACACAGAAACGCAAAT+GGG | - | chr1_1:70828095-70828114 | None:intergenic | 35.0% | |
AAACTACACAGAAACGCAAA+TGG | - | chr1_1:70828096-70828115 | None:intergenic | 35.0% | |
TAACAAAATGTAGTGCTACG+TGG | - | chr1_1:70828127-70828146 | None:intergenic | 35.0% | |
TTGATGAGGTAAAAGGTCAA+GGG | - | chr1_1:70828749-70828768 | None:intergenic | 35.0% | |
AGCAGAACCCAAAATTCAAA+AGG | - | chr1_1:70821889-70821908 | None:intergenic | 35.0% | |
!! | AATCAAGGGATTAGTTCTAC+TGG | - | chr1_1:70828857-70828876 | None:intergenic | 35.0% |
AGTAGAACTAATCCCTTGAT+TGG | + | chr1_1:70828856-70828875 | Msa0040600:CDS | 35.0% | |
TGAAACTCCTACATGATTTC+AGG | + | chr1_1:70828950-70828969 | Msa0040600:CDS | 35.0% | |
GAAACTCCTACATGATTTCA+GGG | + | chr1_1:70828951-70828970 | Msa0040600:CDS | 35.0% | |
GATAGAAGAGTTGTCAAAGA+TGG | + | chr1_1:70828985-70829004 | Msa0040600:CDS | 35.0% | |
AGTTGTCAAAGATGGAGTTA+TGG | + | chr1_1:70828993-70829012 | Msa0040600:CDS | 35.0% | |
ACGAATTTGGGAATAGAAGT+GGG | - | chr1_1:70829122-70829141 | None:intergenic | 35.0% | |
AACGAATTTGGGAATAGAAG+TGG | - | chr1_1:70829123-70829142 | None:intergenic | 35.0% | |
! | AGTTTTCAAAGAAGGAATGG+TGG | + | chr1_1:70829242-70829261 | Msa0040600:CDS | 35.0% |
!!! | TACTTTTGGGATTCAACACT+TGG | + | chr1_1:70829289-70829308 | Msa0040600:CDS | 35.0% |
ACACAAAATCTCACTTCCAT+TGG | + | chr1_1:70824946-70824965 | Msa0040600:intron | 35.0% | |
AAAATCTCACTTCCATTGGA+TGG | + | chr1_1:70824950-70824969 | Msa0040600:intron | 35.0% | |
!! | TGAACTTCAAGTTGATGAAG+TGG | + | chr1_1:70829437-70829456 | Msa0040600:CDS | 35.0% |
! | GGATTTTGTGAGTCATTGAC+AGG | + | chr1_1:70812387-70812406 | Msa0040600:intron | 40.0% |
! | GACAGGAAAGCATATTATGC+AGG | + | chr1_1:70812404-70812423 | Msa0040600:intron | 40.0% |
CAAACACAGTAAGAGTTTGC+AGG | - | chr1_1:70812536-70812555 | None:intergenic | 40.0% | |
TACGCGACATGAGAAGAATT+TGG | - | chr1_1:70812563-70812582 | None:intergenic | 40.0% | |
! | GAACTTAATGGGTGGAAGAA+AGG | - | chr1_1:70812697-70812716 | None:intergenic | 40.0% |
GGAAACTGAAGGGAACTTAA+TGG | - | chr1_1:70812709-70812728 | None:intergenic | 40.0% | |
ATTCAATCATGGAGTCTGTG+GGG | + | chr1_1:70812787-70812806 | Msa0040600:intron | 40.0% | |
! | ACTTCTAAGAACCTCAGAAG+TGG | + | chr1_1:70812947-70812966 | Msa0040600:intron | 40.0% |
!! | AGGAATACACTCTTTTGGGT+TGG | - | chr1_1:70813684-70813703 | None:intergenic | 40.0% |
GAGTGTATATCGACCCAAAA+TGG | + | chr1_1:70814106-70814125 | Msa0040600:intron | 40.0% | |
TGAACTCTAGATCAACACTG+AGG | + | chr1_1:70814212-70814231 | Msa0040600:intron | 40.0% | |
TTTAGAGGTGACATGTAGGA+GGG | - | chr1_1:70814295-70814314 | None:intergenic | 40.0% | |
!! | TTTTAGAGGTGACATGTAGG+AGG | - | chr1_1:70814296-70814315 | None:intergenic | 40.0% |
TCTGGATCTTCTCATCTTGA+AGG | - | chr1_1:70815034-70815053 | None:intergenic | 40.0% | |
TCCAGAGTAAATGCCAAGAT+TGG | + | chr1_1:70815048-70815067 | Msa0040600:CDS | 40.0% | |
ACCAATCTTGGCATTTACTC+TGG | - | chr1_1:70815052-70815071 | None:intergenic | 40.0% | |
GATACAGAAGCTGTGAAAGA+AGG | + | chr1_1:70815183-70815202 | Msa0040600:intron | 40.0% | |
AGCTGTGAAAGAAGGAGTTA+TGG | + | chr1_1:70815191-70815210 | Msa0040600:intron | 40.0% | |
GATGATCAACAACAAGGTGA+TGG | + | chr1_1:70815297-70815316 | Msa0040600:intron | 40.0% | |
GATGATGAACTTCAAGGTGA+TGG | + | chr1_1:70815345-70815364 | Msa0040600:intron | 40.0% | |
!! | TGAACTTCAAGGTGATGGAT+TGG | + | chr1_1:70815350-70815369 | Msa0040600:intron | 40.0% |
!! | ACTTGCTGTATAGACACTAC+TGG | - | chr1_1:70815621-70815640 | None:intergenic | 40.0% |
ACTGAATAGGATTCTGCTTC+TGG | - | chr1_1:70815774-70815793 | None:intergenic | 40.0% | |
!!! | CGACACTCATTTTAAAACGG+AGG | - | chr1_1:70815959-70815978 | None:intergenic | 40.0% |
! | GTGTGCAGAGTATTAATTGG+AGG | - | chr1_1:70816063-70816082 | None:intergenic | 40.0% |
!!! | CCATTGTGGGTATTTTTTGC+AGG | - | chr1_1:70816385-70816404 | None:intergenic | 40.0% |
CCTGCAAAAAATACCCACAA+TGG | + | chr1_1:70816382-70816401 | Msa0040600:intron | 40.0% | |
! | GTGTTTTACCCTATCCATTG+TGG | - | chr1_1:70816399-70816418 | None:intergenic | 40.0% |
!! | GGGTAAAACACCGCTTTTAT+AGG | + | chr1_1:70816408-70816427 | Msa0040600:intron | 40.0% |
CAAGCCCATACCTATAAAAG+CGG | - | chr1_1:70816421-70816440 | None:intergenic | 40.0% | |
! | GCTTTTATAGGTATGGGCTT+GGG | + | chr1_1:70816420-70816439 | Msa0040600:intron | 40.0% |
AAATTTGCGGGTAATTACCC+GGG | - | chr1_1:70816446-70816465 | None:intergenic | 40.0% | |
! | AAATATGTATATGCGGGCTG+CGG | - | chr1_1:70816511-70816530 | None:intergenic | 40.0% |
!! | ACTGATTTGCCCATAGAGTA+TGG | + | chr1_1:70816909-70816928 | Msa0040600:intron | 40.0% |
TGTCCTTCTCCATACTCTAT+GGG | - | chr1_1:70816921-70816940 | None:intergenic | 40.0% | |
! | TTTTTACAAACGCGGGTATG+GGG | + | chr1_1:70816984-70817003 | Msa0040600:intron | 40.0% |
ATCATGCACTATGCAGGTTA+AGG | + | chr1_1:70817081-70817100 | Msa0040600:intron | 40.0% | |
TGACAACCACAATATTGTGG+GGG | + | chr1_1:70817321-70817340 | Msa0040600:intron | 40.0% | |
GCAACATTGTCAAAGTTAGG+GGG | - | chr1_1:70819178-70819197 | None:intergenic | 40.0% | |
CGCAACATTGTCAAAGTTAG+GGG | - | chr1_1:70819177-70819196 | None:intergenic | 40.0% | |
GCAAAGGGGCTAAAACATAA+GGG | - | chr1_1:70819118-70819137 | None:intergenic | 40.0% | |
TGCAAAGGGGCTAAAACATA+AGG | - | chr1_1:70819117-70819136 | None:intergenic | 40.0% | |
CCCGGTCAAAATTGATCAAA+AGG | - | chr1_1:70818040-70818059 | None:intergenic | 40.0% | |
TTGTGATGATTCTGGACACA+TGG | - | chr1_1:70818386-70818405 | None:intergenic | 40.0% | |
TAGGTGAGTTGTGATGATTC+TGG | - | chr1_1:70818394-70818413 | None:intergenic | 40.0% | |
GAGGGTTAATACGGTTAGAA+CGG | - | chr1_1:70818486-70818505 | None:intergenic | 40.0% | |
GATGAACACGAGGGTTAATA+CGG | - | chr1_1:70818495-70818514 | None:intergenic | 40.0% | |
TGAAAAGAGGATGAACACGA+GGG | - | chr1_1:70818504-70818523 | None:intergenic | 40.0% | |
TTGAAAAGAGGATGAACACG+AGG | - | chr1_1:70818505-70818524 | None:intergenic | 40.0% | |
! | TTCTTCTAGGAAGAGACGTA+AGG | - | chr1_1:70818582-70818601 | None:intergenic | 40.0% |
AGAATTACGAACCTCATCGT+CGG | + | chr1_1:70818598-70818617 | Msa0040600:intron | 40.0% | |
GAACGAATCGAATGAGTTGT+TGG | + | chr1_1:70818693-70818712 | Msa0040600:intron | 40.0% | |
! | TCGAATGAGTTGTTGGTGTT+TGG | + | chr1_1:70818700-70818719 | Msa0040600:intron | 40.0% |
TTGAACGAAGATGGATCTGA+TGG | + | chr1_1:70818744-70818763 | Msa0040600:intron | 40.0% | |
TGAACGAAGATGGATCTGAT+GGG | + | chr1_1:70818745-70818764 | Msa0040600:intron | 40.0% | |
!! | ATGATGGTGATGGGAAAAAC+GGG | + | chr1_1:70818805-70818824 | Msa0040600:intron | 40.0% |
! | CTGGGTTTGGATGAATTTTG+TGG | + | chr1_1:70818870-70818889 | Msa0040600:intron | 40.0% |
!! | TGGGTTTTGTGGATGAATTC+TGG | + | chr1_1:70818890-70818909 | Msa0040600:intron | 40.0% |
CTTGGTCAAAATCGACCAAA+AGG | + | chr1_1:70819087-70819106 | Msa0040600:intron | 40.0% | |
TGCAAAGGGGCTAAAACATA+AGG | + | chr1_1:70819117-70819136 | Msa0040600:intron | 40.0% | |
GCAAAGGGGCTAAAACATAA+GGG | + | chr1_1:70819118-70819137 | Msa0040600:intron | 40.0% | |
CGCAACATTGTCAAAGTTAG+GGG | + | chr1_1:70819177-70819196 | Msa0040600:intron | 40.0% | |
GCAACATTGTCAAAGTTAGG+GGG | + | chr1_1:70819178-70819197 | Msa0040600:intron | 40.0% | |
TACGATAGAATAGGTCTGGT+CGG | - | chr1_1:70819377-70819396 | None:intergenic | 40.0% | |
! | GTTGTATTGGTCCTGTTTGT+GGG | - | chr1_1:70819661-70819680 | None:intergenic | 40.0% |
! | AGTTGTATTGGTCCTGTTTG+TGG | - | chr1_1:70819662-70819681 | None:intergenic | 40.0% |
TACGCACAACACAGTTGTAT+TGG | - | chr1_1:70819674-70819693 | None:intergenic | 40.0% | |
TACATGAGTTAACTCACGCT+GGG | + | chr1_1:70819804-70819823 | Msa0040600:intron | 40.0% | |
CAGCATGAGTTAACTCATGT+AGG | - | chr1_1:70819868-70819887 | None:intergenic | 40.0% | |
! | TATCTATTTGGTGACAAGCC+GGG | - | chr1_1:70819994-70820013 | None:intergenic | 40.0% |
TCCACTCTTGCTAATAATGG+CGG | + | chr1_1:70820113-70820132 | Msa0040600:CDS | 40.0% | |
TTTCCAGAGTTATCGGAGAA+TGG | + | chr1_1:70820141-70820160 | Msa0040600:CDS | 40.0% | |
AGAGTTATCGGAGAATGGAA+GGG | + | chr1_1:70820146-70820165 | Msa0040600:CDS | 40.0% | |
AACATGTGTTTCATGATGCG+AGG | + | chr1_1:70820193-70820212 | Msa0040600:intron | 40.0% | |
ACATGTGTTTCATGATGCGA+GGG | + | chr1_1:70820194-70820213 | Msa0040600:intron | 40.0% | |
!! | GGATTGATGGCGTTGTTTAA+AGG | + | chr1_1:70820296-70820315 | Msa0040600:intron | 40.0% |
CATCATCATCCAATGGAAGT+GGG | - | chr1_1:70820375-70820394 | None:intergenic | 40.0% | |
TCATCATCATCCAATGGAAG+TGG | - | chr1_1:70820376-70820395 | None:intergenic | 40.0% | |
! | AAAGAACAAAGTGGTGGTGA+TGG | + | chr1_1:70820397-70820416 | Msa0040600:intron | 40.0% |
AATAGACACATAAGACGGAG+AGG | - | chr1_1:70820613-70820632 | None:intergenic | 40.0% | |
CTCAAACCGATCATATTTGC+AGG | - | chr1_1:70820817-70820836 | None:intergenic | 40.0% | |
!!! | CGACACTCATTTTGAAACGA+AGG | - | chr1_1:70820868-70820887 | None:intergenic | 40.0% |
TGCATGCTTTGTGGGATATA+TGG | + | chr1_1:70821576-70821595 | Msa0040600:intron | 40.0% | |
TGCGCCTCAATTTACGTATT+TGG | + | chr1_1:70821640-70821659 | Msa0040600:intron | 40.0% | |
!!! | AACCAAGGGTTTTGTTCTTC+TGG | - | chr1_1:70821948-70821967 | None:intergenic | 40.0% |
AGAAGAACAAAACCCTTGGT+TGG | + | chr1_1:70821947-70821966 | Msa0040600:CDS | 40.0% | |
AATGAGATTTCATGTCCTGG+TGG | - | chr1_1:70822160-70822179 | None:intergenic | 40.0% | |
GGAAATGAGATTTCATGTCC+TGG | - | chr1_1:70822163-70822182 | None:intergenic | 40.0% | |
GATGATCAACAACGATGTGA+TGG | + | chr1_1:70822190-70822209 | Msa0040600:intron | 40.0% | |
ATTGCTTCATCTATGAGTGC+TGG | - | chr1_1:70822235-70822254 | None:intergenic | 40.0% | |
AGTTGTCAAAGAAGGAGTGA+TGG | + | chr1_1:70822360-70822379 | Msa0040600:intron | 40.0% | |
ACACGAAATCTCACTTCCAT+TGG | + | chr1_1:70822441-70822460 | Msa0040600:intron | 40.0% | |
ATCGTGTATGCAGAAGAAGA+AGG | + | chr1_1:70822543-70822562 | Msa0040600:intron | 40.0% | |
! | GGTCCTTTTTGCTCTTTTCT+TGG | + | chr1_1:70822572-70822591 | Msa0040600:intron | 40.0% |
CAGCCGATACAATTTCTATG+CGG | - | chr1_1:70822764-70822783 | None:intergenic | 40.0% | |
!! | CTTCTTGTTGTTGAACCCAT+TGG | + | chr1_1:70823344-70823363 | Msa0040600:intron | 40.0% |
! | ACTCAGATGTTTTCCTTGGA+TGG | + | chr1_1:70823403-70823422 | Msa0040600:intron | 40.0% |
AATGTCAAATCCACCATCCA+AGG | - | chr1_1:70823419-70823438 | None:intergenic | 40.0% | |
TAGAATGTTGAGTGAAGGTG+TGG | - | chr1_1:70824021-70824040 | None:intergenic | 40.0% | |
CCAACTAGAATGTTGAGTGA+AGG | - | chr1_1:70824026-70824045 | None:intergenic | 40.0% | |
CCTTCACTCAACATTCTAGT+TGG | + | chr1_1:70824023-70824042 | Msa0040600:intron | 40.0% | |
! | CAAGTTGAAAACTCTGAGCA+AGG | + | chr1_1:70824245-70824264 | Msa0040600:intron | 40.0% |
GAGAGTGAGCACAAGAAAAT+TGG | - | chr1_1:70824274-70824293 | None:intergenic | 40.0% | |
CTTGAGCTGTTCATCTTGAA+GGG | - | chr1_1:70824452-70824471 | None:intergenic | 40.0% | |
TCTTGAGCTGTTCATCTTGA+AGG | - | chr1_1:70824453-70824472 | None:intergenic | 40.0% | |
ATGAACAGCTCAAGAAGAAC+AGG | + | chr1_1:70824458-70824477 | Msa0040600:intron | 40.0% | |
! | TTTTGGCGCCAAAATCTTGT+AGG | - | chr1_1:70824574-70824593 | None:intergenic | 40.0% |
GATAGAAGAGTCGTCAAAGA+AGG | + | chr1_1:70824599-70824618 | Msa0040600:CDS | 40.0% | |
AGTCGTCAAAGAAGGAGTTA+TGG | + | chr1_1:70824607-70824626 | Msa0040600:CDS | 40.0% | |
ACATGAAATCCCACTTCCAT+TGG | + | chr1_1:70824688-70824707 | Msa0040600:CDS | 40.0% | |
TCAAACCTAGCAAACTGAGA+TGG | + | chr1_1:70825512-70825531 | Msa0040600:intron | 40.0% | |
!! | ATGTTTTGTTCCACCACCTT+TGG | + | chr1_1:70825720-70825739 | Msa0040600:intron | 40.0% |
GGTATGACATAAAAAAGGGG+TGG | + | chr1_1:70825963-70825982 | Msa0040600:intron | 40.0% | |
ACCATTATCATGCACTATGC+AGG | + | chr1_1:70826049-70826068 | Msa0040600:intron | 40.0% | |
ACCTGCATAGTGCATGATAA+TGG | - | chr1_1:70826053-70826072 | None:intergenic | 40.0% | |
! | CTTTACTGTCTAGGATTTGG+TGG | - | chr1_1:70826222-70826241 | None:intergenic | 40.0% |
! | GGAAAGTTGCTTTACTGTCT+AGG | - | chr1_1:70826231-70826250 | None:intergenic | 40.0% |
! | CCTTTTCAGTGTTTGAGCAT+TGG | - | chr1_1:70826548-70826567 | None:intergenic | 40.0% |
CCAATGCTCAAACACTGAAA+AGG | + | chr1_1:70826545-70826564 | Msa0040600:intron | 40.0% | |
TTATGTCACATTCGTTGTGG+TGG | - | chr1_1:70826625-70826644 | None:intergenic | 40.0% | |
TATGGAACGAACGCAATTGT+AGG | - | chr1_1:70826694-70826713 | None:intergenic | 40.0% | |
!!! | TGATTTGGCTTTTGTGTGCT+TGG | - | chr1_1:70826721-70826740 | None:intergenic | 40.0% |
AGATTCAATTTGGCTAACCG+TGG | - | chr1_1:70826962-70826981 | None:intergenic | 40.0% | |
CTTCGGGACTAGATTCAATT+TGG | - | chr1_1:70826972-70826991 | None:intergenic | 40.0% | |
TCTTTGCATGGAGACTTCTT+CGG | - | chr1_1:70826989-70827008 | None:intergenic | 40.0% | |
!! | TGAAAGTGTCGATCTTTGCA+TGG | - | chr1_1:70827001-70827020 | None:intergenic | 40.0% |
GCAAAGATCGACACTTTCAA+AGG | + | chr1_1:70827002-70827021 | Msa0040600:intron | 40.0% | |
!! | TTATGACTTGCTGACATCTC+AGG | - | chr1_1:70827078-70827097 | None:intergenic | 40.0% |
AGGACAGTATTTCCGATTCT+TGG | - | chr1_1:70827146-70827165 | None:intergenic | 40.0% | |
!! | TATGTTTTTGTTGGGGTGAG+AGG | - | chr1_1:70827265-70827284 | None:intergenic | 40.0% |
CATAATATTTGCAGGAGTCG+GGG | + | chr1_1:70827742-70827761 | Msa0040600:intron | 40.0% | |
! | CTCGAAAAGTAGAGTGTTTG+GGG | - | chr1_1:70827774-70827793 | None:intergenic | 40.0% |
CGTCTCAATGACACTAAAGT+GGG | - | chr1_1:70827929-70827948 | None:intergenic | 40.0% | |
ATACGTAGTGAGTAACGAGT+AGG | + | chr1_1:70828198-70828217 | Msa0040600:intron | 40.0% | |
GGGGTATGTGACGATTAATT+TGG | - | chr1_1:70828245-70828264 | None:intergenic | 40.0% | |
GACATTGGCAATAGAAACAC+AGG | + | chr1_1:70828592-70828611 | Msa0040600:intron | 40.0% | |
! | GTTGATGAGGTAAAAGGTCA+AGG | - | chr1_1:70828750-70828769 | None:intergenic | 40.0% |
GTCATTGCTTCACCAATCAA+GGG | - | chr1_1:70828871-70828890 | None:intergenic | 40.0% | |
! | TTTTGGCCCTGAAATCATGT+AGG | - | chr1_1:70828960-70828979 | None:intergenic | 40.0% |
GTGGCAAGAAGAATAGAAGT+GGG | - | chr1_1:70829086-70829105 | None:intergenic | 40.0% | |
CTGCTGTTGCAAACGAATTT+GGG | - | chr1_1:70829134-70829153 | None:intergenic | 40.0% | |
ACTGCTGTTGCAAACGAATT+TGG | - | chr1_1:70829135-70829154 | None:intergenic | 40.0% | |
TGTTGTTCATCACCATCCAA+TGG | - | chr1_1:70829342-70829361 | None:intergenic | 40.0% | |
! | TTGGATGGTGATGAACAACA+AGG | + | chr1_1:70829342-70829361 | Msa0040600:CDS | 40.0% |
GATGAACAACAAGGTGATGA+TGG | + | chr1_1:70829351-70829370 | Msa0040600:CDS | 40.0% | |
CAGAAAGATGCTGAACAACA+AGG | + | chr1_1:70829393-70829412 | Msa0040600:CDS | 40.0% | |
CAATTTGCATTGTGTGCACC+AGG | - | chr1_1:70812506-70812525 | None:intergenic | 45.0% | |
!! | CCTTCCTCCTCCATTTTTGA+CGG | + | chr1_1:70812646-70812665 | Msa0040600:intron | 45.0% |
!! | CTTCCTCCTCCATTTTTGAC+GGG | + | chr1_1:70812647-70812666 | Msa0040600:intron | 45.0% |
ACTGAAGGGAACTTAATGGG+TGG | - | chr1_1:70812705-70812724 | None:intergenic | 45.0% | |
TTCAATCATGGAGTCTGTGG+GGG | + | chr1_1:70812788-70812807 | Msa0040600:intron | 45.0% | |
!!! | AGTTTGTGCGGTTTTGAGGA+AGG | + | chr1_1:70812847-70812866 | Msa0040600:intron | 45.0% |
CAGCTCTATTACCACTTCTG+AGG | - | chr1_1:70812961-70812980 | None:intergenic | 45.0% | |
ACTAACAAGCACCCTGCATA+CGG | + | chr1_1:70813114-70813133 | Msa0040600:intron | 45.0% | |
CAAGACCAAGACTGTCACTA+AGG | + | chr1_1:70813352-70813371 | Msa0040600:intron | 45.0% | |
ACTCTAGATCAACACTGAGG+TGG | + | chr1_1:70814215-70814234 | Msa0040600:intron | 45.0% | |
GTCATTATTCCTGGGAGTTG+AGG | - | chr1_1:70814249-70814268 | None:intergenic | 45.0% | |
TGCTTCAGCTTCACCAATCT+TGG | - | chr1_1:70815064-70815083 | None:intergenic | 45.0% | |
TTCAACATCTTCATGCCACC+AGG | + | chr1_1:70815249-70815268 | Msa0040600:intron | 45.0% | |
AGTGAGATTTCATGTCCTGG+TGG | - | chr1_1:70815267-70815286 | None:intergenic | 45.0% | |
GGAAGTGAGATTTCATGTCC+TGG | - | chr1_1:70815270-70815289 | None:intergenic | 45.0% | |
!!! | GACGCTCATTTTGAAACGGA+GGG | + | chr1_1:70816200-70816219 | Msa0040600:intron | 45.0% |
TAGGGATGACAATTAGACCC+AGG | + | chr1_1:70816348-70816367 | Msa0040600:intron | 45.0% | |
ACAATTAGACCCAGGCTTGA+TGG | + | chr1_1:70816356-70816375 | Msa0040600:intron | 45.0% | |
CAATTAGACCCAGGCTTGAT+GGG | + | chr1_1:70816357-70816376 | Msa0040600:intron | 45.0% | |
! | CGCTTTTATAGGTATGGGCT+TGG | + | chr1_1:70816419-70816438 | Msa0040600:intron | 45.0% |
! | AATATGTATATGCGGGCTGC+GGG | - | chr1_1:70816510-70816529 | None:intergenic | 45.0% |
!! | CAAAGTGCGGGTAATGGATA+CGG | + | chr1_1:70816878-70816897 | Msa0040600:intron | 45.0% |
!! | AAAGTGCGGGTAATGGATAC+GGG | + | chr1_1:70816879-70816898 | Msa0040600:intron | 45.0% |
TTGCCCATAGAGTATGGAGA+AGG | + | chr1_1:70816915-70816934 | Msa0040600:intron | 45.0% | |
GTGTCCTTCTCCATACTCTA+TGG | - | chr1_1:70816922-70816941 | None:intergenic | 45.0% | |
! | CACTTAAGTTGTTACCCACG+AGG | + | chr1_1:70816939-70816958 | Msa0040600:intron | 45.0% |
AGTTGTTACCCACGAGGATA+CGG | + | chr1_1:70816945-70816964 | Msa0040600:intron | 45.0% | |
CACTCTATCATGCACTATGC+AGG | + | chr1_1:70817075-70817094 | Msa0040600:intron | 45.0% | |
!! | GTTTTGACCCTGAGGTTTCT+AGG | + | chr1_1:70817153-70817172 | Msa0040600:intron | 45.0% |
GCTTCTGCTGTGAAAGCTAA+AGG | + | chr1_1:70817522-70817541 | Msa0040600:intron | 45.0% | |
! | TTTCGTCCTTCTAGAGAGAG+AGG | - | chr1_1:70818331-70818350 | None:intergenic | 45.0% |
AGGACGAAAACAGAGCAGAA+AGG | + | chr1_1:70818342-70818361 | Msa0040600:intron | 45.0% | |
TGATGATTCTGGACACATGG+TGG | - | chr1_1:70818383-70818402 | None:intergenic | 45.0% | |
! | TAAAGGATCGATTCCACGGT+AGG | - | chr1_1:70818413-70818432 | None:intergenic | 45.0% |
! | GGAGTAAAGGATCGATTCCA+CGG | - | chr1_1:70818417-70818436 | None:intergenic | 45.0% |
ATTGTTGTGGCGGTTGGAAT+GGG | - | chr1_1:70818446-70818465 | None:intergenic | 45.0% | |
GGTTAATACGGTTAGAACGG+CGG | - | chr1_1:70818483-70818502 | None:intergenic | 45.0% | |
TAATCCTAAAAACACCGCCG+TGG | - | chr1_1:70818642-70818661 | None:intergenic | 45.0% | |
!!! | ACGGCGGTGTTTTTAGGATT+AGG | + | chr1_1:70818641-70818660 | Msa0040600:intron | 45.0% |
GGATCTGATGGGAAGAAGAA+TGG | + | chr1_1:70818756-70818775 | Msa0040600:intron | 45.0% | |
GGCGGTGGTTTAAAGAATGA+TGG | + | chr1_1:70818789-70818808 | Msa0040600:intron | 45.0% | |
CAGCGTGAGTTAACTCATGT+AGG | - | chr1_1:70819805-70819824 | None:intergenic | 45.0% | |
CTACATGAGTTAACTCACGC+TGG | + | chr1_1:70819803-70819822 | Msa0040600:intron | 45.0% | |
! | AAAAGGAAGGAAGGTTGGCT+AGG | + | chr1_1:70820013-70820032 | Msa0040600:intron | 45.0% |
! | AAAGGAAGGAAGGTTGGCTA+GGG | + | chr1_1:70820014-70820033 | Msa0040600:intron | 45.0% |
! | GAGTGGATTTGTAGGCTTCA+CGG | - | chr1_1:70820100-70820119 | None:intergenic | 45.0% |
TCCGCCATTATTAGCAAGAG+TGG | - | chr1_1:70820117-70820136 | None:intergenic | 45.0% | |
CTTCCATTCTCCGATAACTC+TGG | - | chr1_1:70820147-70820166 | None:intergenic | 45.0% | |
CAGAGTTATCGGAGAATGGA+AGG | + | chr1_1:70820145-70820164 | Msa0040600:CDS | 45.0% | |
CGTTATGGTACGGTAACCAT+TGG | - | chr1_1:70820247-70820266 | None:intergenic | 45.0% | |
! | TCAACACCTTTTTGCCACCA+TGG | + | chr1_1:70820342-70820361 | Msa0040600:intron | 45.0% |
! | CAACACCTTTTTGCCACCAT+GGG | + | chr1_1:70820343-70820362 | Msa0040600:intron | 45.0% |
TTTCTCCCATGGTGGCAAAA+AGG | - | chr1_1:70820351-70820370 | None:intergenic | 45.0% | |
TTGGCATCATCCGTTCTATG+TGG | + | chr1_1:70821207-70821226 | Msa0040600:intron | 45.0% | |
CTGGAGCTGTTCATCTTGAA+GGG | - | chr1_1:70821929-70821948 | None:intergenic | 45.0% | |
! | TCTGGAGCTGTTCATCTTGA+AGG | - | chr1_1:70821930-70821949 | None:intergenic | 45.0% |
CTCCAGAAGAACAAAACCCT+TGG | + | chr1_1:70821943-70821962 | Msa0040600:CDS | 45.0% | |
TCCATTGCATCACCAACCAA+GGG | - | chr1_1:70821962-70821981 | None:intergenic | 45.0% | |
TTCAACATCTTCTTGCCACC+AGG | + | chr1_1:70822142-70822161 | Msa0040600:intron | 45.0% | |
CGTTGTTGATCATCCTCCAA+TGG | - | chr1_1:70822184-70822203 | None:intergenic | 45.0% | |
GATGGATCAGTGCTCAAAGA+TGG | + | chr1_1:70822208-70822227 | Msa0040600:intron | 45.0% | |
ACTCAACACTTTCTTGCCAG+CGG | + | chr1_1:70822417-70822436 | Msa0040600:intron | 45.0% | |
! | CAGATGTTTTCCTTGGATGG+TGG | + | chr1_1:70823406-70823425 | Msa0040600:intron | 45.0% |
TTTGGACTCTCACATTCGCA+TGG | + | chr1_1:70823825-70823844 | Msa0040600:intron | 45.0% | |
TCCCTTGATTGACGATGCAA+GGG | + | chr1_1:70824481-70824500 | Msa0040600:CDS | 45.0% | |
ACCCTTGCATCGTCAATCAA+GGG | - | chr1_1:70824485-70824504 | None:intergenic | 45.0% | |
!! | CGATGCAAGGGTGTTTGTAA+AGG | + | chr1_1:70824493-70824512 | Msa0040600:CDS | 45.0% |
TTCAACATCTTCTTGCCACC+AGG | + | chr1_1:70822142-70822161 | Msa0040600:intron | 45.0% | |
! | TTTTGGCACGGTAATCAGCT+AGG | - | chr1_1:70824832-70824851 | None:intergenic | 45.0% |
ATTCAACACCTTCTTGCCAG+AGG | + | chr1_1:70824922-70824941 | Msa0040600:intron | 45.0% | |
TTCAACACCTTCTTGCCAGA+GGG | + | chr1_1:70824923-70824942 | Msa0040600:intron | 45.0% | |
! | AGTGAGATTTTGTGTCCCTC+TGG | - | chr1_1:70824941-70824960 | None:intergenic | 45.0% |
ACCTAGCAAACTGAGATGGA+AGG | + | chr1_1:70825516-70825535 | Msa0040600:intron | 45.0% | |
CCTAGCAAACTGAGATGGAA+GGG | + | chr1_1:70825517-70825536 | Msa0040600:intron | 45.0% | |
! | TTTTGTTCCACCACCTTTGG+AGG | + | chr1_1:70825723-70825742 | Msa0040600:intron | 45.0% |
! | AATTTTGCCTCCTCCAAAGG+TGG | - | chr1_1:70825736-70825755 | None:intergenic | 45.0% |
AACGTGATCACTTCAGCACA+AGG | + | chr1_1:70826465-70826484 | Msa0040600:intron | 45.0% | |
AAGGCGTGCCAAAGAAAACA+CGG | + | chr1_1:70826484-70826503 | Msa0040600:intron | 45.0% | |
!!! | TTTTTGGGACTCAGTCCTCT+TGG | - | chr1_1:70826577-70826596 | None:intergenic | 45.0% |
!!! | TTGGATTGGTTTTGATGGGG+TGG | - | chr1_1:70826825-70826844 | None:intergenic | 45.0% |
!!! | GGCTTGGATTGGTTTTGATG+GGG | - | chr1_1:70826828-70826847 | None:intergenic | 45.0% |
!!! | GGGCTTGGATTGGTTTTGAT+GGG | - | chr1_1:70826829-70826848 | None:intergenic | 45.0% |
!!! | TGGGCTTGGATTGGTTTTGA+TGG | - | chr1_1:70826830-70826849 | None:intergenic | 45.0% |
GTCCTACTTTCAGTGCTTTG+TGG | - | chr1_1:70826862-70826881 | None:intergenic | 45.0% | |
CCGTGGCATTATTCCTACAA+CGG | - | chr1_1:70826945-70826964 | None:intergenic | 45.0% | |
CCGTTGTAGGAATAATGCCA+CGG | + | chr1_1:70826942-70826961 | Msa0040600:intron | 45.0% | |
CTTTGCATGGAGACTTCTTC+GGG | - | chr1_1:70826988-70827007 | None:intergenic | 45.0% | |
! | GGACCTTTTTGTGCCAAATG+AGG | + | chr1_1:70827024-70827043 | Msa0040600:intron | 45.0% |
GGACCTCATTTGGCACAAAA+AGG | - | chr1_1:70827030-70827049 | None:intergenic | 45.0% | |
TGGCTCTTGGAATTCGAATG+GGG | - | chr1_1:70827120-70827139 | None:intergenic | 45.0% | |
GTGGCTCTTGGAATTCGAAT+GGG | - | chr1_1:70827121-70827140 | None:intergenic | 45.0% | |
AGTGGCTCTTGGAATTCGAA+TGG | - | chr1_1:70827122-70827141 | None:intergenic | 45.0% | |
GTATTTCCGATTCTTGGCAG+TGG | - | chr1_1:70827140-70827159 | None:intergenic | 45.0% | |
! | AGAGATGTTACAGGGGTGTA+GGG | - | chr1_1:70827193-70827212 | None:intergenic | 45.0% |
! | AAGAGATGTTACAGGGGTGT+AGG | - | chr1_1:70827194-70827213 | None:intergenic | 45.0% |
TGGGAGGAAGAGATGTTACA+GGG | - | chr1_1:70827201-70827220 | None:intergenic | 45.0% | |
GCGTCTCAATGACACTAAAG+TGG | - | chr1_1:70827930-70827949 | None:intergenic | 45.0% | |
! | TAGTGTCATTGAGACGCCAA+AGG | + | chr1_1:70827933-70827952 | Msa0040600:intron | 45.0% |
TTTCCCGTTCTTCCTTCTTC+CGG | + | chr1_1:70828009-70828028 | Msa0040600:intron | 45.0% | |
AAACCCGGAAGAAGGAAGAA+CGG | - | chr1_1:70828016-70828035 | None:intergenic | 45.0% | |
AGAACGTAGTGATGTGAGGA+AGG | + | chr1_1:70828052-70828071 | Msa0040600:intron | 45.0% | |
GAACGTAGTGATGTGAGGAA+GGG | + | chr1_1:70828053-70828072 | Msa0040600:intron | 45.0% | |
AACGTAGTGATGTGAGGAAG+GGG | + | chr1_1:70828054-70828073 | Msa0040600:intron | 45.0% | |
CTGGAGCTGTTCATCTTGAA+GGG | - | chr1_1:70821929-70821948 | None:intergenic | 45.0% | |
ACTGGAGCTGTTCATCTTGA+AGG | - | chr1_1:70828839-70828858 | None:intergenic | 45.0% | |
CGTCATTGCTTCACCAATCA+AGG | - | chr1_1:70828872-70828891 | None:intergenic | 45.0% | |
TTCAACATCTTCTTGCCAGC+AGG | + | chr1_1:70829051-70829070 | Msa0040600:CDS | 45.0% | |
GGTGGCAAGAAGAATAGAAG+TGG | - | chr1_1:70829087-70829106 | None:intergenic | 45.0% | |
CTTCTATTCTTCTTGCCACC+AGG | + | chr1_1:70829087-70829106 | Msa0040600:CDS | 45.0% | |
AGAAGTGGGAATTCATGTCC+TGG | - | chr1_1:70829108-70829127 | None:intergenic | 45.0% | |
! | AGTGAGATTTTGTGTCCTGC+TGG | - | chr1_1:70829318-70829337 | None:intergenic | 45.0% |
GATGCTGAACAACAAGGTGA+TGG | + | chr1_1:70829399-70829418 | Msa0040600:CDS | 45.0% | |
!! | ATGTTATTATAAAATATAAA+TGG | - | chr1_1:70817441-70817460 | None:intergenic | 5.0% |
!!! | TTTTTAATTTTTTTTAATAG+GGG | - | chr1_1:70819146-70819165 | None:intergenic | 5.0% |
!! | AAATTAAAAAAAAATAGAAA+AGG | + | chr1_1:70818133-70818152 | Msa0040600:intron | 5.0% |
!! | ATAAAATAAAAAATAGAAAA+GGG | - | chr1_1:70818964-70818983 | None:intergenic | 5.0% |
!! | AATAAAATAAAAAATAGAAA+AGG | - | chr1_1:70818965-70818984 | None:intergenic | 5.0% |
!!! | TTTTTAATTTTTTTTAATAG+GGG | + | chr1_1:70819146-70819165 | Msa0040600:intron | 5.0% |
!!! | GATTATAATTTTTTTTTTTT+TGG | + | chr1_1:70823653-70823672 | Msa0040600:intron | 5.0% |
ATTCCTATCGGCACGCTGTA+CGG | - | chr1_1:70812600-70812619 | None:intergenic | 50.0% | |
CCGTCAAAAATGGAGGAGGA+AGG | - | chr1_1:70812649-70812668 | None:intergenic | 50.0% | |
TCAGCACTGCCCGTCAAAAA+TGG | - | chr1_1:70812659-70812678 | None:intergenic | 50.0% | |
TCAATCATGGAGTCTGTGGG+GGG | + | chr1_1:70812789-70812808 | Msa0040600:intron | 50.0% | |
CTAACAAGCACCCTGCATAC+GGG | + | chr1_1:70813115-70813134 | Msa0040600:intron | 50.0% | |
TAACAAGCACCCTGCATACG+GGG | + | chr1_1:70813116-70813135 | Msa0040600:intron | 50.0% | |
TAACGAGTACCCCGTATGCA+GGG | - | chr1_1:70813128-70813147 | None:intergenic | 50.0% | |
ATAACGAGTACCCCGTATGC+AGG | - | chr1_1:70813129-70813148 | None:intergenic | 50.0% | |
TGGCACCTTAGTGACAGTCT+TGG | - | chr1_1:70813360-70813379 | None:intergenic | 50.0% | |
! | TGAGCTTAGCTCGGTTGGTA+GGG | - | chr1_1:70813969-70813988 | None:intergenic | 50.0% |
TTGTCCTCGTGAGCTTAGCT+CGG | - | chr1_1:70813978-70813997 | None:intergenic | 50.0% | |
GTTCATGTACCTCAACTCCC+AGG | + | chr1_1:70814237-70814256 | Msa0040600:intron | 50.0% | |
GACATGTAGGAGGGTCGAAA+GGG | - | chr1_1:70814286-70814305 | None:intergenic | 50.0% | |
TGACATGTAGGAGGGTCGAA+AGG | - | chr1_1:70814287-70814306 | None:intergenic | 50.0% | |
TCGGCTGTTCTGATACCTAC+AGG | + | chr1_1:70815816-70815835 | Msa0040600:intron | 50.0% | |
!!! | CGACGCTCATTTTGAAACGG+AGG | + | chr1_1:70816199-70816218 | Msa0040600:intron | 50.0% |
! | ATATGTATATGCGGGCTGCG+GGG | - | chr1_1:70816509-70816528 | None:intergenic | 50.0% |
GTTGTTACCCACGAGGATAC+GGG | + | chr1_1:70816946-70816965 | Msa0040600:intron | 50.0% | |
CAATGGGTACCCAATGGGTA+GGG | - | chr1_1:70817025-70817044 | None:intergenic | 50.0% | |
GATGGCAATGGGTACCCAAT+GGG | - | chr1_1:70817030-70817049 | None:intergenic | 50.0% | |
AGATGGCAATGGGTACCCAA+TGG | - | chr1_1:70817031-70817050 | None:intergenic | 50.0% | |
!! | ACCCTGAGGTTTCTAGGACA+AGG | + | chr1_1:70817159-70817178 | Msa0040600:intron | 50.0% |
CCCTTGTCCTAGAAACCTCA+GGG | - | chr1_1:70817163-70817182 | None:intergenic | 50.0% | |
!! | CCCTGAGGTTTCTAGGACAA+GGG | + | chr1_1:70817160-70817179 | Msa0040600:intron | 50.0% |
!! | CCTGAGGTTTCTAGGACAAG+GGG | + | chr1_1:70817161-70817180 | Msa0040600:intron | 50.0% |
!! | CTGAGGTTTCTAGGACAAGG+GGG | + | chr1_1:70817162-70817181 | Msa0040600:intron | 50.0% |
TCGAACTCGGCATTGCAATG+CGG | + | chr1_1:70817210-70817229 | Msa0040600:intron | 50.0% | |
TGCAGACCCCCACAATATTG+TGG | - | chr1_1:70817330-70817349 | None:intergenic | 50.0% | |
ACGTGAGGAGAAGAAGGGAT+TGG | + | chr1_1:70818175-70818194 | Msa0040600:intron | 50.0% | |
! | CCTTCTAGAGAGAGAGGATG+TGG | - | chr1_1:70818325-70818344 | None:intergenic | 50.0% |
CCACATCCTCTCTCTCTAGA+AGG | + | chr1_1:70818322-70818341 | Msa0040600:intron | 50.0% | |
TCATCACAACTCACCTACCG+TGG | + | chr1_1:70818397-70818416 | Msa0040600:intron | 50.0% | |
GAATGGGAGGAGTGGAGTAA+AGG | - | chr1_1:70818430-70818449 | None:intergenic | 50.0% | |
GATTGTTGTGGCGGTTGGAA+TGG | - | chr1_1:70818447-70818466 | None:intergenic | 50.0% | |
AGAGAGGGAGATTGTTGTGG+CGG | - | chr1_1:70818456-70818475 | None:intergenic | 50.0% | |
GACAGAGAGGGAGATTGTTG+TGG | - | chr1_1:70818459-70818478 | None:intergenic | 50.0% | |
AAAAACACCGCCGTGGATGA+CGG | - | chr1_1:70818635-70818654 | None:intergenic | 50.0% | |
! | TCATCCACGGCGGTGTTTTT+AGG | + | chr1_1:70818635-70818654 | Msa0040600:intron | 50.0% |
GATGGGAAGAAGAATGGCAG+CGG | + | chr1_1:70818762-70818781 | Msa0040600:intron | 50.0% | |
AAGAAGAATGGCAGCGGTGA+TGG | + | chr1_1:70818768-70818787 | Msa0040600:intron | 50.0% | |
TGACCAAGACAACGCCTAAG+TGG | - | chr1_1:70819075-70819094 | None:intergenic | 50.0% | |
! | AACTCACGCAGCGGGTATTT+TGG | + | chr1_1:70819908-70819927 | Msa0040600:intron | 50.0% |
TGTATGGGAGTGAGCGTCTT+AGG | + | chr1_1:70819937-70819956 | Msa0040600:intron | 50.0% | |
AAATGTTTCGCGTGAGCCTG+AGG | + | chr1_1:70820060-70820079 | Msa0040600:intron | 50.0% | |
AAGTGGGATTTCTCCCATGG+TGG | - | chr1_1:70820359-70820378 | None:intergenic | 50.0% | |
TGGAAGTGGGATTTCTCCCA+TGG | - | chr1_1:70820362-70820381 | None:intergenic | 50.0% | |
GGGAGAAATCCCACTTCCAT+TGG | + | chr1_1:70820363-70820382 | Msa0040600:intron | 50.0% | |
!! | ACCCTTGGTTGGTGATGCAA+TGG | + | chr1_1:70821958-70821977 | Msa0040600:CDS | 50.0% |
CTCCATTGCATCACCAACCA+AGG | - | chr1_1:70821963-70821982 | None:intergenic | 50.0% | |
CTCAACACTTTCTTGCCAGC+GGG | + | chr1_1:70822418-70822437 | Msa0040600:intron | 50.0% | |
ACTTCTTTCACGTGCTCCCT+TGG | + | chr1_1:70823303-70823322 | Msa0040600:intron | 50.0% | |
GTCCCTTGATTGACGATGCA+AGG | + | chr1_1:70824480-70824499 | Msa0040600:CDS | 50.0% | |
CACCCTTGCATCGTCAATCA+AGG | - | chr1_1:70824486-70824505 | None:intergenic | 50.0% | |
AGTGGGATTTCATGTCCTGG+TGG | - | chr1_1:70824683-70824702 | None:intergenic | 50.0% | |
GGAAGTGGGATTTCATGTCC+TGG | - | chr1_1:70824686-70824705 | None:intergenic | 50.0% | |
TTTGTGTCCCTCTGGCAAGA+AGG | - | chr1_1:70824933-70824952 | None:intergenic | 50.0% | |
! | CCCTTCCATCTCAGTTTGCT+AGG | - | chr1_1:70825520-70825539 | None:intergenic | 50.0% |
CTGAAAAGGGCCTAACCAAG+AGG | + | chr1_1:70826559-70826578 | Msa0040600:intron | 50.0% | |
ACACATGAGGTCAGAAGGAG+CGG | - | chr1_1:70826760-70826779 | None:intergenic | 50.0% | |
!! | TTTTGATGGGGTGGACTCTC+AGG | - | chr1_1:70826816-70826835 | None:intergenic | 50.0% |
!! | GGCCACAAAGCACTGAAAGT+AGG | + | chr1_1:70826857-70826876 | Msa0040600:intron | 50.0% |
GCATTATTCCTACAACGGCG+CGG | - | chr1_1:70826940-70826959 | None:intergenic | 50.0% | |
GGCTCTTGGAATTCGAATGG+GGG | - | chr1_1:70827119-70827138 | None:intergenic | 50.0% | |
CAAGAGCCACTGCCAAGAAT+CGG | + | chr1_1:70827131-70827150 | Msa0040600:intron | 50.0% | |
GGGAGGAAGAGATGTTACAG+GGG | - | chr1_1:70827200-70827219 | None:intergenic | 50.0% | |
GTGGGAGGAAGAGATGTTAC+AGG | - | chr1_1:70827202-70827221 | None:intergenic | 50.0% | |
TGGAGAGTGATGGTTGCCTT+TGG | - | chr1_1:70827952-70827971 | None:intergenic | 50.0% | |
GACGTACGATTGGAGAGTGA+TGG | - | chr1_1:70827962-70827981 | None:intergenic | 50.0% | |
GAAGGAAGAACGGGAAACAC+TGG | - | chr1_1:70828006-70828025 | None:intergenic | 50.0% | |
TTCCCGTTCTTCCTTCTTCC+GGG | + | chr1_1:70828010-70828029 | Msa0040600:intron | 50.0% | |
AACCCGGAAGAAGGAAGAAC+GGG | - | chr1_1:70828015-70828034 | None:intergenic | 50.0% | |
TGTAGTGCTACGTGGCAAAG+TGG | - | chr1_1:70828119-70828138 | None:intergenic | 50.0% | |
AGTGGGATTTCATCTCCTGC+TGG | - | chr1_1:70829069-70829088 | None:intergenic | 50.0% | |
AGTGGGAATTCATGTCCTGG+TGG | - | chr1_1:70829105-70829124 | None:intergenic | 50.0% | |
TTCAACACTTGGTTGCCAGC+AGG | + | chr1_1:70829300-70829319 | Msa0040600:CDS | 50.0% | |
TTCCTATCGGCACGCTGTAC+GGG | - | chr1_1:70812599-70812618 | None:intergenic | 55.0% | |
CTGCCCGTCAAAAATGGAGG+AGG | - | chr1_1:70812653-70812672 | None:intergenic | 55.0% | |
GCACTGCCCGTCAAAAATGG+AGG | - | chr1_1:70812656-70812675 | None:intergenic | 55.0% | |
GTGAGCTTAGCTCGGTTGGT+AGG | - | chr1_1:70813970-70813989 | None:intergenic | 55.0% | |
TATAGGTATGGGCTTGGGCC+CGG | + | chr1_1:70816425-70816444 | Msa0040600:intron | 55.0% | |
!! | GCGGGTAATGGATACGGGTA+TGG | + | chr1_1:70816884-70816903 | Msa0040600:intron | 55.0% |
TACAAACGCGGGTATGGGGA+AGG | + | chr1_1:70816988-70817007 | Msa0040600:intron | 55.0% | |
ACAAACGCGGGTATGGGGAA+GGG | + | chr1_1:70816989-70817008 | Msa0040600:intron | 55.0% | |
GCAATGGGTACCCAATGGGT+AGG | - | chr1_1:70817026-70817045 | None:intergenic | 55.0% | |
CCCCTTGTCCTAGAAACCTC+AGG | - | chr1_1:70817164-70817183 | None:intergenic | 55.0% | |
!! | AGGTTTCTAGGACAAGGGGG+CGG | + | chr1_1:70817165-70817184 | Msa0040600:intron | 55.0% |
ATACACGTGGCACGTTGACC+CGG | - | chr1_1:70818058-70818077 | None:intergenic | 55.0% | |
AGGGAGATTGTTGTGGCGGT+TGG | - | chr1_1:70818452-70818471 | None:intergenic | 55.0% | |
TAGAACGGCGGTGACAGAGA+GGG | - | chr1_1:70818471-70818490 | None:intergenic | 55.0% | |
TTAGAACGGCGGTGACAGAG+AGG | - | chr1_1:70818472-70818491 | None:intergenic | 55.0% | |
ACGAACCTCATCGTCGGAGT+TGG | + | chr1_1:70818604-70818623 | Msa0040600:intron | 55.0% | |
CGATTCCAACTCCGACGATG+AGG | - | chr1_1:70818612-70818631 | None:intergenic | 55.0% | |
GTTGGAATCGCCGTCATCCA+CGG | + | chr1_1:70818622-70818641 | Msa0040600:intron | 55.0% | |
! | AAGAATGGCAGCGGTGATGG+CGG | + | chr1_1:70818771-70818790 | Msa0040600:intron | 55.0% |
TACACACGTGGCAGCCACTT+AGG | + | chr1_1:70819058-70819077 | Msa0040600:intron | 55.0% | |
! | CAGCCACTTAGGCGTTGTCT+TGG | + | chr1_1:70819069-70819088 | Msa0040600:intron | 55.0% |
! | AGTGTGAGTTGACTCACGCG+GGG | - | chr1_1:70819764-70819783 | None:intergenic | 55.0% |
! | GAGTGTGAGTTGACTCACGC+GGG | - | chr1_1:70819765-70819784 | None:intergenic | 55.0% |
! | CGAGTGTGAGTTGACTCACG+CGG | - | chr1_1:70819766-70819785 | None:intergenic | 55.0% |
CGCGTGAGTCAACTCACACT+CGG | + | chr1_1:70819764-70819783 | Msa0040600:intron | 55.0% | |
GCGTGAGTTAACTCACGCAG+CGG | + | chr1_1:70819899-70819918 | Msa0040600:intron | 55.0% | |
CGTGAGTTAACTCACGCAGC+GGG | + | chr1_1:70819900-70819919 | Msa0040600:intron | 55.0% | |
TGGGAGTGAGCGTCTTAGGT+TGG | + | chr1_1:70819941-70819960 | Msa0040600:intron | 55.0% | |
GGGAGTGAGCGTCTTAGGTT+GGG | + | chr1_1:70819942-70819961 | Msa0040600:intron | 55.0% | |
GGAATGAAGAGAGCAGCCTC+AGG | - | chr1_1:70820079-70820098 | None:intergenic | 55.0% | |
ATCGGAGAATGGAAGGGCAG+TGG | + | chr1_1:70820152-70820171 | Msa0040600:CDS | 55.0% | |
AAGGGCAGTGGCGTTTGTAG+TGG | + | chr1_1:70820164-70820183 | Msa0040600:CDS | 55.0% | |
AGTGAGATTTCGTGTCCCGC+TGG | - | chr1_1:70822436-70822455 | None:intergenic | 55.0% | |
CGTGCTCCCTTGGTAGAAAC+TGG | + | chr1_1:70823313-70823332 | Msa0040600:intron | 55.0% | |
AGCGCTCGAAGATCGAGCAA+TGG | + | chr1_1:70824739-70824758 | Msa0040600:CDS | 55.0% | |
! | TGTTCCACCACCTTTGGAGG+AGG | + | chr1_1:70825726-70825745 | Msa0040600:intron | 55.0% |
TTTGCCTCCTCCAAAGGTGG+TGG | - | chr1_1:70825733-70825752 | None:intergenic | 55.0% | |
TGTGAGGCTGCAACTTGTCG+TGG | - | chr1_1:70826357-70826376 | None:intergenic | 55.0% | |
GGGACTCAGTCCTCTTGGTT+AGG | - | chr1_1:70826572-70826591 | None:intergenic | 55.0% | |
GTCACATTCGTTGTGGTGGC+TGG | - | chr1_1:70826621-70826640 | None:intergenic | 55.0% | |
TTTCAGTGCTTTGTGGCCGC+TGG | - | chr1_1:70826855-70826874 | None:intergenic | 55.0% | |
TGGGGGTTACTCTGTTCGTG+CGG | - | chr1_1:70827102-70827121 | None:intergenic | 55.0% | |
CGATTCTTGGCAGTGGCTCT+TGG | - | chr1_1:70827133-70827152 | None:intergenic | 55.0% | |
TGTTGGGGTGAGAGGCAGAT+GGG | - | chr1_1:70827257-70827276 | None:intergenic | 55.0% | |
TTGTTGGGGTGAGAGGCAGA+TGG | - | chr1_1:70827258-70827277 | None:intergenic | 55.0% | |
GCGTTTCGAGACACTCGCTA+AGG | + | chr1_1:70827534-70827553 | Msa0040600:intron | 55.0% | |
TCCAATCGTACGTCGTCGTG+TGG | + | chr1_1:70827968-70827987 | Msa0040600:intron | 55.0% | |
CCAATCGTACGTCGTCGTGT+GGG | + | chr1_1:70827969-70827988 | Msa0040600:intron | 55.0% | |
!! | CGTCGTCGTGTGGGTTTTGA+CGG | + | chr1_1:70827978-70827997 | Msa0040600:intron | 55.0% |
GTAGTGATGTGAGGAAGGGG+AGG | + | chr1_1:70828057-70828076 | Msa0040600:intron | 55.0% | |
GTGAGGAAGGGGAGGAAGAA+AGG | + | chr1_1:70828065-70828084 | Msa0040600:intron | 55.0% | |
ATCGGCACGCTGTACGGGTT+CGG | - | chr1_1:70812594-70812613 | None:intergenic | 60.0% | |
! | AACCCGTACAGCGTGCCGAT+AGG | + | chr1_1:70812594-70812613 | Msa0040600:intron | 60.0% |
CATGGAGTCTGTGGGGGGAA+AGG | + | chr1_1:70812794-70812813 | Msa0040600:intron | 60.0% | |
CCTCGTGAGCTTAGCTCGGT+TGG | - | chr1_1:70813974-70813993 | None:intergenic | 60.0% | |
CCAACCGAGCTAAGCTCACG+AGG | + | chr1_1:70813971-70813990 | Msa0040600:intron | 60.0% | |
TGCAGGTGCCCATCAAGCCT+GGG | - | chr1_1:70816368-70816387 | None:intergenic | 60.0% | |
TTGCAGGTGCCCATCAAGCC+TGG | - | chr1_1:70816369-70816388 | None:intergenic | 60.0% | |
ATAGGTATGGGCTTGGGCCC+GGG | + | chr1_1:70816426-70816445 | Msa0040600:intron | 60.0% | |
TACCCACGAGGATACGGGCT+CGG | + | chr1_1:70816951-70816970 | Msa0040600:intron | 60.0% | |
GTTGTGGCGGTTGGAATGGG+AGG | - | chr1_1:70818443-70818462 | None:intergenic | 60.0% | |
! | GTGTGAGTTGACTCACGCGG+GGG | - | chr1_1:70819763-70819782 | None:intergenic | 60.0% |
CCAATCCAAGCCCACACCAG+CGG | + | chr1_1:70826836-70826855 | Msa0040600:intron | 60.0% | |
TGCTTTGTGGCCGCTGGTGT+GGG | - | chr1_1:70826849-70826868 | None:intergenic | 60.0% | |
! | CGGTTGTGTGTAGCGGGATG+CGG | - | chr1_1:70826920-70826939 | None:intergenic | 60.0% |
AACGGCGCGGTTGTGTGTAG+CGG | - | chr1_1:70826927-70826946 | None:intergenic | 60.0% | |
ACACACAACCGCGCCGTTGT+AGG | + | chr1_1:70826929-70826948 | Msa0040600:intron | 60.0% | |
! | GAAGTGGCGTCGGAGGTTGT+GGG | - | chr1_1:70827226-70827245 | None:intergenic | 60.0% |
GTTGGGGTGAGAGGCAGATG+GGG | - | chr1_1:70827256-70827275 | None:intergenic | 60.0% | |
CCCACACGACGACGTACGAT+TGG | - | chr1_1:70827972-70827991 | None:intergenic | 60.0% | |
TCGGCACGCTGTACGGGTTC+GGG | - | chr1_1:70812593-70812612 | None:intergenic | 65.0% | |
! | GTATATGCGGGCTGCGGGGT+TGG | - | chr1_1:70816505-70816524 | None:intergenic | 65.0% |
ACCCACGAGGATACGGGCTC+GGG | + | chr1_1:70816952-70816971 | Msa0040600:intron | 65.0% | |
ACCCGAGCCCGTATCCTCGT+GGG | - | chr1_1:70816956-70816975 | None:intergenic | 65.0% | |
TACCCGAGCCCGTATCCTCG+TGG | - | chr1_1:70816957-70816976 | None:intergenic | 65.0% | |
CGAGGATACGGGCTCGGGTA+TGG | + | chr1_1:70816957-70816976 | Msa0040600:intron | 65.0% | |
GGCGGTTGGAATGGGAGGAG+TGG | - | chr1_1:70818438-70818457 | None:intergenic | 65.0% | |
GGAATCGCCGTCATCCACGG+CGG | + | chr1_1:70818625-70818644 | Msa0040600:intron | 65.0% | |
!! | AATGGCAGCGGTGATGGCGG+TGG | + | chr1_1:70818774-70818793 | Msa0040600:intron | 65.0% |
CCGCTGGTGTGGGCTTGGAT+TGG | - | chr1_1:70826839-70826858 | None:intergenic | 65.0% | |
GTGCTTTGTGGCCGCTGGTG+TGG | - | chr1_1:70826850-70826869 | None:intergenic | 65.0% | |
AGCGGGATGCGGTCATGTCG+AGG | - | chr1_1:70826909-70826928 | None:intergenic | 65.0% | |
ACGGCGCGGTTGTGTGTAGC+GGG | - | chr1_1:70826926-70826945 | None:intergenic | 65.0% | |
TCGGAGGTTGTGGGTGTGGG+AGG | - | chr1_1:70827217-70827236 | None:intergenic | 65.0% | |
GCGTCGGAGGTTGTGGGTGT+GGG | - | chr1_1:70827220-70827239 | None:intergenic | 65.0% | |
! | GGAAGTGGCGTCGGAGGTTG+TGG | - | chr1_1:70827227-70827246 | None:intergenic | 65.0% |
! | CAGATGGGGAGGCGTGGAAG+TGG | - | chr1_1:70827242-70827261 | None:intergenic | 65.0% |
GCTGTACGGGTTCGGGGTCG+TGG | - | chr1_1:70812586-70812605 | None:intergenic | 70.0% | |
CGGCACGCTGTACGGGTTCG+GGG | - | chr1_1:70812592-70812611 | None:intergenic | 70.0% | |
TGTGGCCGCTGGTGTGGGCT+TGG | - | chr1_1:70826844-70826863 | None:intergenic | 70.0% | |
! | GGCGTCGGAGGTTGTGGGTG+TGG | - | chr1_1:70827221-70827240 | None:intergenic | 70.0% |
! | AGGCGTGGAAGTGGCGTCGG+AGG | - | chr1_1:70827233-70827252 | None:intergenic | 70.0% |
! | GGGAGGCGTGGAAGTGGCGT+CGG | - | chr1_1:70827236-70827255 | None:intergenic | 70.0% |
GAGAGGCAGATGGGGAGGCG+TGG | - | chr1_1:70827248-70827267 | None:intergenic | 70.0% | |
GGGGTGAGAGGCAGATGGGG+AGG | - | chr1_1:70827253-70827272 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1_1 | gene | 70811977 | 70829500 | 70811977 | ID=Msa0040600;Name=Msa0040600 |
chr1_1 | mRNA | 70811977 | 70829500 | 70811977 | ID=Msa0040600-mRNA-1;Parent=Msa0040600;Name=Msa0040600-mRNA-1;_AED=0.37;_eAED=0.38;_QI=0|0|0|1|0|0.14|7|0|427 |
chr1_1 | exon | 70811977 | 70811994 | 70811977 | ID=Msa0040600-mRNA-1:exon:23391;Parent=Msa0040600-mRNA-1 |
chr1_1 | exon | 70815039 | 70815101 | 70815039 | ID=Msa0040600-mRNA-1:exon:23392;Parent=Msa0040600-mRNA-1 |
chr1_1 | exon | 70820105 | 70820197 | 70820105 | ID=Msa0040600-mRNA-1:exon:23393;Parent=Msa0040600-mRNA-1 |
chr1_1 | exon | 70821935 | 70822026 | 70821935 | ID=Msa0040600-mRNA-1:exon:23394;Parent=Msa0040600-mRNA-1 |
chr1_1 | exon | 70824466 | 70824630 | 70824466 | ID=Msa0040600-mRNA-1:exon:23395;Parent=Msa0040600-mRNA-1 |
chr1_1 | exon | 70824664 | 70824859 | 70824664 | ID=Msa0040600-mRNA-1:exon:23396;Parent=Msa0040600-mRNA-1 |
chr1_1 | exon | 70828844 | 70829500 | 70828844 | ID=Msa0040600-mRNA-1:exon:23397;Parent=Msa0040600-mRNA-1 |
chr1_1 | CDS | 70811977 | 70811994 | 70811977 | ID=Msa0040600-mRNA-1:cds;Parent=Msa0040600-mRNA-1 |
chr1_1 | CDS | 70815039 | 70815101 | 70815039 | ID=Msa0040600-mRNA-1:cds;Parent=Msa0040600-mRNA-1 |
chr1_1 | CDS | 70820105 | 70820197 | 70820105 | ID=Msa0040600-mRNA-1:cds;Parent=Msa0040600-mRNA-1 |
chr1_1 | CDS | 70821935 | 70822026 | 70821935 | ID=Msa0040600-mRNA-1:cds;Parent=Msa0040600-mRNA-1 |
chr1_1 | CDS | 70824466 | 70824630 | 70824466 | ID=Msa0040600-mRNA-1:cds;Parent=Msa0040600-mRNA-1 |
chr1_1 | CDS | 70824664 | 70824859 | 70824664 | ID=Msa0040600-mRNA-1:cds;Parent=Msa0040600-mRNA-1 |
chr1_1 | CDS | 70828844 | 70829500 | 70828844 | ID=Msa0040600-mRNA-1:cds;Parent=Msa0040600-mRNA-1 |
Gene Sequence |
Protein sequence |