Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0041750 | XP_003592481.1 | 81.935 | 155 | 23 | 1 | 2 | 156 | 138 | 287 | 1.03e-80 | 250 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0041750 | sp|Q7XHI9|BH084_ARATH | 71.795 | 117 | 29 | 2 | 42 | 155 | 212 | 327 | 6.70e-50 | 165 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|---|---|
| Msa0041750 | TF | bHLH |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0041750 | MtrunA17_Chr1g0207311 | 81.935 | 155 | 23 | 1 | 2 | 156 | 138 | 287 | 9.49e-85 | 250 |
| Msa0041750 | MtrunA17_Chr1g0207301 | 61.184 | 152 | 55 | 2 | 2 | 149 | 221 | 372 | 1.48e-52 | 171 |
| Msa0041750 | MtrunA17_Chr5g0393721 | 63.871 | 155 | 46 | 5 | 2 | 149 | 157 | 308 | 6.23e-52 | 168 |
| Msa0041750 | MtrunA17_Chr3g0134741 | 59.848 | 132 | 42 | 2 | 18 | 149 | 193 | 313 | 7.88e-46 | 152 |
| Msa0041750 | MtrunA17_Chr1g0152651 | 81.818 | 77 | 14 | 0 | 64 | 140 | 273 | 349 | 4.20e-40 | 138 |
| Msa0041750 | MtrunA17_Chr5g0435021 | 59.155 | 71 | 29 | 0 | 63 | 133 | 216 | 286 | 2.00e-25 | 98.6 |
| Msa0041750 | MtrunA17_Chr8g0384141 | 66.071 | 56 | 19 | 0 | 74 | 129 | 123 | 178 | 3.97e-19 | 81.3 |
| Msa0041750 | MtrunA17_Chr3g0134001 | 46.914 | 81 | 43 | 0 | 74 | 154 | 180 | 260 | 4.91e-18 | 78.2 |
| Msa0041750 | MtrunA17_Chr4g0074161 | 49.383 | 81 | 36 | 1 | 48 | 128 | 194 | 269 | 6.23e-18 | 79.3 |
| Msa0041750 | MtrunA17_Chr7g0243041 | 56.364 | 55 | 24 | 0 | 72 | 126 | 33 | 87 | 1.56e-16 | 72.0 |
| Msa0041750 | MtrunA17_Chr1g0190731 | 52.055 | 73 | 35 | 0 | 56 | 128 | 184 | 256 | 1.64e-16 | 75.1 |
| Msa0041750 | MtrunA17_Chr1g0193321 | 50.877 | 57 | 28 | 0 | 72 | 128 | 469 | 525 | 2.19e-15 | 72.4 |
| Msa0041750 | MtrunA17_Chr1g0153241 | 39.437 | 71 | 43 | 0 | 72 | 142 | 92 | 162 | 2.10e-14 | 68.6 |
| Msa0041750 | MtrunA17_Chr3g0095391 | 43.056 | 72 | 36 | 1 | 63 | 134 | 307 | 373 | 5.40e-14 | 68.2 |
| Msa0041750 | MtrunA17_Chr7g0234761 | 47.368 | 76 | 39 | 1 | 54 | 128 | 306 | 381 | 1.29e-13 | 67.0 |
| Msa0041750 | MtrunA17_Chr5g0402031 | 39.706 | 68 | 41 | 0 | 74 | 141 | 114 | 181 | 1.72e-13 | 66.6 |
| Msa0041750 | MtrunA17_Chr4g0014771 | 52.941 | 68 | 31 | 1 | 64 | 130 | 117 | 184 | 2.54e-12 | 61.6 |
| Msa0041750 | MtrunA17_Chr1g0182791 | 43.860 | 57 | 32 | 0 | 72 | 128 | 324 | 380 | 3.09e-12 | 63.2 |
| Msa0041750 | MtrunA17_Chr8g0339091 | 38.614 | 101 | 52 | 2 | 54 | 153 | 280 | 371 | 4.06e-12 | 62.8 |
| Msa0041750 | MtrunA17_Chr1g0152131 | 38.462 | 91 | 55 | 1 | 39 | 128 | 234 | 324 | 1.26e-11 | 61.2 |
| Msa0041750 | MtrunA17_Chr7g0262691 | 42.029 | 69 | 40 | 0 | 57 | 125 | 244 | 312 | 1.27e-11 | 61.2 |
| Msa0041750 | MtrunA17_Chr7g0271251 | 46.269 | 67 | 36 | 0 | 72 | 138 | 439 | 505 | 4.68e-11 | 59.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0041750 | AT2G14760.1 | 71.795 | 117 | 29 | 2 | 42 | 155 | 212 | 327 | 6.81e-51 | 165 |
| Msa0041750 | AT4G33880.1 | 69.643 | 112 | 33 | 1 | 37 | 147 | 237 | 348 | 1.94e-47 | 157 |
| Msa0041750 | AT2G14760.3 | 64.615 | 130 | 29 | 3 | 42 | 155 | 212 | 340 | 3.21e-47 | 156 |
| Msa0041750 | AT5G43175.1 | 77.011 | 87 | 20 | 0 | 61 | 147 | 128 | 214 | 3.33e-45 | 147 |
| Msa0041750 | AT1G27740.1 | 76.190 | 84 | 20 | 0 | 64 | 147 | 166 | 249 | 2.30e-43 | 144 |
| Msa0041750 | AT5G37800.1 | 46.078 | 102 | 42 | 1 | 32 | 133 | 181 | 269 | 1.23e-23 | 94.4 |
| Msa0041750 | AT1G66470.1 | 41.085 | 129 | 51 | 2 | 5 | 133 | 160 | 263 | 4.13e-23 | 92.8 |
| Msa0041750 | AT2G24260.2 | 50.617 | 81 | 40 | 0 | 59 | 139 | 29 | 109 | 2.03e-19 | 82.0 |
| Msa0041750 | AT4G30980.1 | 44.340 | 106 | 54 | 1 | 23 | 128 | 93 | 193 | 2.20e-19 | 82.8 |
| Msa0041750 | AT4G30980.2 | 44.340 | 106 | 54 | 1 | 23 | 128 | 141 | 241 | 3.28e-19 | 82.8 |
| Msa0041750 | AT2G24260.1 | 57.143 | 70 | 30 | 0 | 59 | 128 | 132 | 201 | 5.77e-19 | 82.0 |
| Msa0041750 | AT3G21330.1 | 58.929 | 56 | 23 | 0 | 72 | 127 | 276 | 331 | 1.37e-17 | 78.6 |
| Msa0041750 | AT5G58010.1 | 43.617 | 94 | 49 | 1 | 35 | 128 | 73 | 162 | 3.96e-17 | 76.6 |
| Msa0041750 | AT5G01305.1 | 49.206 | 63 | 32 | 0 | 62 | 124 | 34 | 96 | 1.57e-16 | 72.8 |
| Msa0041750 | AT4G00120.1 | 51.786 | 56 | 27 | 0 | 72 | 127 | 119 | 174 | 2.35e-16 | 72.8 |
| Msa0041750 | AT1G09530.3 | 43.939 | 66 | 37 | 0 | 72 | 137 | 344 | 409 | 1.52e-14 | 70.1 |
| Msa0041750 | AT1G09530.2 | 43.939 | 66 | 37 | 0 | 72 | 137 | 344 | 409 | 1.52e-14 | 70.1 |
| Msa0041750 | AT1G09530.5 | 43.939 | 66 | 37 | 0 | 72 | 137 | 344 | 409 | 1.52e-14 | 70.1 |
| Msa0041750 | AT1G09530.1 | 43.939 | 66 | 37 | 0 | 72 | 137 | 344 | 409 | 1.52e-14 | 70.1 |
| Msa0041750 | AT1G09530.4 | 43.939 | 66 | 37 | 0 | 72 | 137 | 344 | 409 | 1.52e-14 | 70.1 |
| Msa0041750 | AT1G09530.6 | 43.939 | 66 | 37 | 0 | 72 | 137 | 344 | 409 | 1.52e-14 | 70.1 |
| Msa0041750 | AT4G36930.1 | 37.838 | 74 | 46 | 0 | 72 | 145 | 198 | 271 | 1.80e-13 | 67.0 |
| Msa0041750 | AT2G20180.7 | 47.368 | 57 | 30 | 0 | 72 | 128 | 214 | 270 | 1.04e-12 | 64.7 |
| Msa0041750 | AT2G20180.1 | 47.368 | 57 | 30 | 0 | 72 | 128 | 214 | 270 | 1.04e-12 | 64.7 |
| Msa0041750 | AT2G20180.5 | 47.368 | 57 | 30 | 0 | 72 | 128 | 214 | 270 | 1.04e-12 | 64.7 |
| Msa0041750 | AT2G20180.4 | 47.368 | 57 | 30 | 0 | 72 | 128 | 285 | 341 | 1.07e-12 | 65.1 |
| Msa0041750 | AT2G20180.6 | 47.368 | 57 | 30 | 0 | 72 | 128 | 285 | 341 | 1.07e-12 | 65.1 |
| Msa0041750 | AT2G20180.2 | 47.368 | 57 | 30 | 0 | 72 | 128 | 285 | 341 | 1.07e-12 | 65.1 |
| Msa0041750 | AT2G20180.3 | 47.368 | 57 | 30 | 0 | 72 | 128 | 285 | 341 | 1.07e-12 | 65.1 |
| Msa0041750 | AT3G23690.1 | 44.737 | 76 | 41 | 1 | 54 | 128 | 180 | 255 | 1.60e-12 | 64.3 |
| Msa0041750 | AT5G48560.1 | 46.053 | 76 | 40 | 1 | 54 | 128 | 290 | 365 | 1.68e-12 | 64.3 |
| Msa0041750 | AT5G48560.2 | 46.053 | 76 | 40 | 1 | 54 | 128 | 290 | 365 | 1.81e-12 | 64.3 |
| Msa0041750 | AT5G50915.1 | 35.766 | 137 | 81 | 4 | 16 | 149 | 85 | 217 | 1.88e-12 | 63.5 |
| Msa0041750 | AT5G50915.2 | 35.766 | 137 | 81 | 4 | 16 | 149 | 85 | 217 | 1.88e-12 | 63.5 |
| Msa0041750 | AT5G50915.3 | 35.766 | 137 | 81 | 4 | 16 | 149 | 85 | 217 | 1.97e-12 | 63.5 |
| Msa0041750 | AT5G50915.4 | 35.766 | 137 | 81 | 4 | 16 | 149 | 85 | 217 | 1.97e-12 | 63.5 |
| Msa0041750 | AT1G25330.1 | 45.333 | 75 | 40 | 1 | 55 | 128 | 94 | 168 | 4.47e-12 | 62.0 |
| Msa0041750 | AT3G07340.1 | 38.947 | 95 | 38 | 2 | 54 | 128 | 228 | 322 | 4.48e-12 | 63.2 |
| Msa0041750 | AT3G07340.2 | 38.947 | 95 | 38 | 2 | 54 | 128 | 228 | 322 | 5.41e-12 | 62.8 |
| Msa0041750 | AT4G00050.2 | 30.833 | 120 | 68 | 2 | 13 | 132 | 68 | 172 | 5.69e-12 | 62.4 |
| Msa0041750 | AT2G46970.1 | 31.868 | 91 | 56 | 2 | 72 | 156 | 230 | 320 | 7.66e-12 | 62.4 |
| Msa0041750 | AT1G73830.2 | 42.857 | 84 | 44 | 2 | 66 | 148 | 148 | 228 | 8.48e-12 | 61.6 |
| Msa0041750 | AT4G00050.1 | 46.154 | 52 | 28 | 0 | 81 | 132 | 223 | 274 | 8.69e-12 | 62.4 |
| Msa0041750 | AT1G73830.1 | 42.857 | 84 | 44 | 2 | 66 | 148 | 148 | 228 | 8.81e-12 | 61.6 |
| Msa0041750 | AT2G46970.2 | 31.868 | 91 | 56 | 2 | 72 | 156 | 199 | 289 | 8.87e-12 | 62.0 |
| Msa0041750 | AT2G46970.3 | 31.868 | 91 | 56 | 2 | 72 | 156 | 208 | 298 | 1.01e-11 | 62.0 |
| Msa0041750 | AT2G20180.8 | 47.273 | 55 | 29 | 0 | 72 | 126 | 285 | 339 | 1.05e-11 | 62.0 |
| Msa0041750 | AT4G00050.3 | 46.154 | 52 | 28 | 0 | 81 | 132 | 223 | 274 | 1.14e-11 | 62.0 |
| Msa0041750 | AT5G67110.1 | 45.614 | 57 | 29 | 1 | 74 | 128 | 94 | 150 | 1.40e-11 | 60.5 |
| Msa0041750 | AT4G28790.1 | 46.774 | 62 | 32 | 1 | 81 | 142 | 287 | 347 | 8.39e-11 | 59.3 |
Find 37 sgRNAs with CRISPR-Local
Find 484 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTAGGTGCTTCAGGTTCTTT+TGG | 0.199723 | 1_1:+72225120 | None:intergenic |
| TTTCTTCTCCAACAAATTAA+AGG | 0.200250 | 1_1:-72224493 | None:intergenic |
| TGGCTCATAGAAGCAGATTT+TGG | 0.243169 | 1_1:+72225246 | None:intergenic |
| CTACATAACTTAGGTGCTTC+AGG | 0.272661 | 1_1:+72225111 | None:intergenic |
| TTCATCTTCCTTTAATTTGT+TGG | 0.289475 | 1_1:+72224485 | None:intergenic |
| ACCTGTGAAAAGCAGTTGTT+GGG | 0.352708 | 1_1:+72225195 | None:intergenic |
| TTCATTCCGTTGTAAGCAAT+TGG | 0.357966 | 1_1:+72224536 | None:intergenic |
| AATCCTTCTCTGGAGCAAAA+TGG | 0.363323 | 1_1:-72225165 | Msa0041750:CDS |
| AAAGCCACCTTAGTTCCATT+TGG | 0.367330 | 1_1:+72224838 | None:intergenic |
| AAGCCACCTTAGTTCCATTT+GGG | 0.398498 | 1_1:+72224839 | None:intergenic |
| TGTTGGGGCCATGCCACGTT+AGG | 0.432755 | 1_1:+72225211 | None:intergenic |
| AACCTGTGAAAAGCAGTTGT+TGG | 0.441611 | 1_1:+72225194 | None:intergenic |
| TTGCAAACTCTTGTCCCAAA+TGG | 0.455826 | 1_1:-72224853 | Msa0041750:CDS |
| GGTTAACTCTAATCCTTCTC+TGG | 0.470256 | 1_1:-72225175 | Msa0041750:CDS |
| TCTTGTCCCAAATGGAACTA+AGG | 0.490202 | 1_1:-72224845 | Msa0041750:intron |
| CAGAAAATATGAGGAATGTC+GGG | 0.493269 | 1_1:-72225275 | Msa0041750:CDS |
| TGTAGGTTTCAGAAAATATG+AGG | 0.493461 | 1_1:-72225284 | Msa0041750:intron |
| TCAGAAAATATGAGGAATGT+CGG | 0.520339 | 1_1:-72225276 | Msa0041750:intron |
| ATGCTCTGTGCATCAGTGGC+AGG | 0.521454 | 1_1:+72225066 | None:intergenic |
| GAAGAGAAAGAATAAATGAA+AGG | 0.522466 | 1_1:-72224885 | Msa0041750:CDS |
| GCTTACAACGGAATGAACAT+TGG | 0.538193 | 1_1:-72224530 | Msa0041750:CDS |
| TAAGTTATGTAGAAAATCAA+AGG | 0.563263 | 1_1:-72225100 | Msa0041750:CDS |
| TTATGTAGAAAATCAAAGGC+AGG | 0.577202 | 1_1:-72225096 | Msa0041750:CDS |
| GAAGAGGGCCTAACGTGGCA+TGG | 0.578421 | 1_1:-72225219 | Msa0041750:CDS |
| ACGTTAGGCCCTCTTCATTG+TGG | 0.582294 | 1_1:+72225226 | None:intergenic |
| AGAAAATCAAAGGCAGGAGG+TGG | 0.582545 | 1_1:-72225090 | Msa0041750:CDS |
| TTCTATGAGCCACAATGAAG+AGG | 0.594727 | 1_1:-72225235 | Msa0041750:CDS |
| TCTATGAGCCACAATGAAGA+GGG | 0.602341 | 1_1:-72225234 | Msa0041750:CDS |
| GGATATCAGTACCATGCTTG+AGG | 0.609481 | 1_1:-72224724 | Msa0041750:CDS |
| TTGGACAGCTTCCTCAAGCA+TGG | 0.619471 | 1_1:+72224713 | None:intergenic |
| CCTTCTCTGGAGCAAAATGG+AGG | 0.627664 | 1_1:-72225162 | Msa0041750:CDS |
| TTGTTGGAGAAGAAAAGCTG+AGG | 0.679207 | 1_1:+72224501 | None:intergenic |
| TATGCTCCAATTGCTTACAA+CGG | 0.683400 | 1_1:-72224542 | Msa0041750:CDS |
| ACAATGAAGAGGGCCTAACG+TGG | 0.686185 | 1_1:-72225224 | Msa0041750:CDS |
| TGTAGAAAATCAAAGGCAGG+AGG | 0.688576 | 1_1:-72225093 | Msa0041750:CDS |
| ATAAATGCTCTGTGCATCAG+TGG | 0.693217 | 1_1:+72225062 | None:intergenic |
| CCTGTGAAAAGCAGTTGTTG+GGG | 0.707435 | 1_1:+72225196 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GTAAAAACAATAATAATAAA+GGG | - | chr1_1:72226128-72226147 | Msa0041750:intron | 10.0% |
| !!! | ATTGTCTTTTATTTTATTTT+AGG | + | chr1_1:72227068-72227087 | None:intergenic | 10.0% |
| !! | TTAAAGTAAAATATTCTAAA+AGG | - | chr1_1:72227088-72227107 | Msa0041750:intron | 10.0% |
| !! | AAAAACTAAAAATAATAGGA+GGG | + | chr1_1:72224596-72224615 | None:intergenic | 15.0% |
| !! | ACACAAAAACTAAAAATAAT+AGG | + | chr1_1:72224600-72224619 | None:intergenic | 15.0% |
| !! | TGTTATGAAATAAATAGTTA+AGG | - | chr1_1:72224617-72224636 | Msa0041750:intron | 15.0% |
| !! | GGTAAAAACAATAATAATAA+AGG | - | chr1_1:72226127-72226146 | Msa0041750:intron | 15.0% |
| !! | TATGAATAATAATCAGAAAT+AGG | - | chr1_1:72227730-72227749 | Msa0041750:intron | 15.0% |
| !! | CTAATTACTCAATATATAAT+TGG | - | chr1_1:72231200-72231219 | Msa0041750:intron | 15.0% |
| !! | AGAGTATAGAATCAAAAAAT+TGG | - | chr1_1:72224519-72224538 | Msa0041750:CDS | 20.0% |
| !! | GAGTATAGAATCAAAAAATT+GGG | - | chr1_1:72224520-72224539 | Msa0041750:CDS | 20.0% |
| !! | CAAAAACTAAAAATAATAGG+AGG | + | chr1_1:72224597-72224616 | None:intergenic | 20.0% |
| !!! | ATTTTTCTACAAAAAAGCAA+CGG | - | chr1_1:72224703-72224722 | Msa0041750:CDS | 20.0% |
| !! | AAGTTTAAATGCTATTATCA+AGG | - | chr1_1:72224740-72224759 | Msa0041750:intron | 20.0% |
| !! | TCTTATATATATACAGAGTT+TGG | - | chr1_1:72224821-72224840 | Msa0041750:intron | 20.0% |
| !! | TCATTATAGAGTTTATTAGA+AGG | - | chr1_1:72225622-72225641 | Msa0041750:intron | 20.0% |
| !! | TGAATCTAGATTAGAAATTA+GGG | - | chr1_1:72226543-72226562 | Msa0041750:intron | 20.0% |
| !! | CTTGAAATAAACAAAGTAAA+AGG | - | chr1_1:72226752-72226771 | Msa0041750:intron | 20.0% |
| !!! | TTATTTTAGGAACGAATATA+TGG | + | chr1_1:72227055-72227074 | None:intergenic | 20.0% |
| !!! | ATAGAAGTACTTAAAGTATA+AGG | - | chr1_1:72228407-72228426 | Msa0041750:intron | 20.0% |
| !! | TTTATTATCAACATGAATAC+TGG | - | chr1_1:72228472-72228491 | Msa0041750:intron | 20.0% |
| !!! | ATTTTGTTTCCTTGATAATA+TGG | + | chr1_1:72224752-72224771 | None:intergenic | 20.0% |
| !! | ACTCTTATATATATAGAGTT+TGG | - | chr1_1:72230528-72230547 | Msa0041750:intron | 20.0% |
| !!! | TAATCATGATTTTACTATGT+AGG | - | chr1_1:72230693-72230712 | Msa0041750:intron | 20.0% |
| !!! | TTTGATTTTCTACATAACTT+AGG | + | chr1_1:72230895-72230914 | None:intergenic | 20.0% |
| !! | TAAGTTATGTAGAAAATCAA+AGG | - | chr1_1:72230894-72230913 | Msa0041750:intron | 20.0% |
| !! | CAATATATAATTGGTTAAGA+TGG | - | chr1_1:72231209-72231228 | Msa0041750:intron | 20.0% |
| !!! | TTTTTTTGTTTGTGAATTGT+AGG | - | chr1_1:72231246-72231265 | Msa0041750:intron | 20.0% |
| !! | GCATATAAGAAATTGAAAAT+TGG | + | chr1_1:72231356-72231375 | None:intergenic | 20.0% |
| ! | TTGGATAGAAGAAGATTAAA+AGG | - | chr1_1:72225001-72225020 | Msa0041750:intron | 25.0% |
| ! | TATTATGATGAGTTTGAGTA+GGG | - | chr1_1:72225476-72225495 | Msa0041750:intron | 25.0% |
| ! | TCAGCTTATAGAAGATTAAT+TGG | + | chr1_1:72225577-72225596 | None:intergenic | 25.0% |
| !!! | GCTTTTAAAATCAAAGACAT+TGG | + | chr1_1:72225784-72225803 | None:intergenic | 25.0% |
| !! | AACTTTTAGTGAATGATTAG+AGG | - | chr1_1:72226069-72226088 | Msa0041750:intron | 25.0% |
| ! | AACCATGAAATTAGATGTTT+AGG | + | chr1_1:72226203-72226222 | None:intergenic | 25.0% |
| ! | GTGAATCTAGATTAGAAATT+AGG | - | chr1_1:72226542-72226561 | Msa0041750:intron | 25.0% |
| ! | ATTAGGGTTACATAGAAATT+AGG | - | chr1_1:72226559-72226578 | Msa0041750:intron | 25.0% |
| ! | TTAGGGTTACATAGAAATTA+GGG | - | chr1_1:72226560-72226579 | Msa0041750:intron | 25.0% |
| ! | AAATTGCAACGAAAGTAAAA+AGG | - | chr1_1:72226702-72226721 | Msa0041750:intron | 25.0% |
| ! | AAGTAAAAGGTGAATGTTTA+TGG | - | chr1_1:72226765-72226784 | Msa0041750:intron | 25.0% |
| ! | TTAGAAACTAAGCAACTAAA+AGG | - | chr1_1:72226823-72226842 | Msa0041750:intron | 25.0% |
| ! | TAGAAACTAAGCAACTAAAA+GGG | - | chr1_1:72226824-72226843 | Msa0041750:intron | 25.0% |
| !! | TTTGAGACCATATAAAGAAT+TGG | - | chr1_1:72227222-72227241 | Msa0041750:intron | 25.0% |
| ! | AAACTCACCAATTCTTTATA+TGG | + | chr1_1:72227232-72227251 | None:intergenic | 25.0% |
| ! | ACAAAATCATGTAAATATGC+AGG | - | chr1_1:72227802-72227821 | Msa0041750:intron | 25.0% |
| ! | TCTAGAAATGAAGATTTCTT+TGG | - | chr1_1:72228014-72228033 | Msa0041750:intron | 25.0% |
| ! | AGATTTCTTTGGATTGAAAA+AGG | - | chr1_1:72228025-72228044 | Msa0041750:intron | 25.0% |
| !!! | ACAAAGTTTTGAATATGTGA+AGG | - | chr1_1:72228236-72228255 | Msa0041750:intron | 25.0% |
| ! | TAACCCATAAAAATCTACTA+TGG | - | chr1_1:72228285-72228304 | Msa0041750:intron | 25.0% |
| !! | TGACCATAGTAGATTTTTAT+GGG | + | chr1_1:72228291-72228310 | None:intergenic | 25.0% |
| !! | ATGACCATAGTAGATTTTTA+TGG | + | chr1_1:72228292-72228311 | None:intergenic | 25.0% |
| ! | ATTACTTCACTTAGACATTT+GGG | + | chr1_1:72228369-72228388 | None:intergenic | 25.0% |
| ! | AATTACTTCACTTAGACATT+TGG | + | chr1_1:72228370-72228389 | None:intergenic | 25.0% |
| !!! | GAATTTTGCTATCAAAAACA+TGG | + | chr1_1:72229316-72229335 | None:intergenic | 25.0% |
| !! | CAATATTTGGAGTTATTCTT+TGG | - | chr1_1:72229367-72229386 | Msa0041750:intron | 25.0% |
| !! | TATTGAAGATTCTAGCATTT+TGG | + | chr1_1:72229454-72229473 | None:intergenic | 25.0% |
| !!! | ACTGGTTTGAATGATAATTT+TGG | + | chr1_1:72229588-72229607 | None:intergenic | 25.0% |
| ! | AATCTGATACCATATTATCA+AGG | - | chr1_1:72230449-72230468 | Msa0041750:intron | 25.0% |
| ! | AGTTAAATGTCTCTCATTAT+AGG | - | chr1_1:72231059-72231078 | Msa0041750:intron | 25.0% |
| ! | GAAGAGAAAGAATAAATGAA+AGG | - | chr1_1:72231109-72231128 | Msa0041750:intron | 25.0% |
| !! | ATTCTATACTCTTCTGAAGT+AGG | + | chr1_1:72224511-72224530 | None:intergenic | 30.0% |
| AATCTTCTTCTATCCAAGTT+GGG | + | chr1_1:72224998-72225017 | None:intergenic | 30.0% | |
| TAATCTTCTTCTATCCAAGT+TGG | + | chr1_1:72224999-72225018 | None:intergenic | 30.0% | |
| AGAAGAAGATTAAAAGGTTG+AGG | - | chr1_1:72225007-72225026 | Msa0041750:intron | 30.0% | |
| ! | ATCTGATCTTTGGAAGAAAT+AGG | - | chr1_1:72225058-72225077 | Msa0041750:CDS | 30.0% |
| ! | TTGGTAATTCTCTTGTTTCA+TGG | + | chr1_1:72225303-72225322 | None:intergenic | 30.0% |
| ATGAAACAAGAGAATTACCA+AGG | - | chr1_1:72225302-72225321 | Msa0041750:intron | 30.0% | |
| AATTACCAAGGAAGAAACAA+TGG | - | chr1_1:72225314-72225333 | Msa0041750:intron | 30.0% | |
| !!! | AGAGTTTTGAGATACCTTAA+AGG | + | chr1_1:72225448-72225467 | None:intergenic | 30.0% |
| GTATTATGATGAGTTTGAGT+AGG | - | chr1_1:72225475-72225494 | Msa0041750:intron | 30.0% | |
| TAAGAAATTGACTAAGTTGC+TGG | - | chr1_1:72225503-72225522 | Msa0041750:intron | 30.0% | |
| AAGAAATTGACTAAGTTGCT+GGG | - | chr1_1:72225504-72225523 | Msa0041750:intron | 30.0% | |
| TGGGTAATATATGTGATATC+AGG | - | chr1_1:72225523-72225542 | Msa0041750:intron | 30.0% | |
| AATATATGTGATATCAGGTC+TGG | - | chr1_1:72225528-72225547 | Msa0041750:intron | 30.0% | |
| AGTTTATTAGAAGGATCAGA+TGG | - | chr1_1:72225631-72225650 | Msa0041750:intron | 30.0% | |
| ! | TTAGAAGATTCAGGTTTACT+TGG | + | chr1_1:72225676-72225695 | None:intergenic | 30.0% |
| !!! | GGCCAACTGAAATATTTTTT+GGG | + | chr1_1:72225763-72225782 | None:intergenic | 30.0% |
| !!! | TGGCCAACTGAAATATTTTT+TGG | + | chr1_1:72225764-72225783 | None:intergenic | 30.0% |
| !! | TTATGTTGATGATGTGATCT+TGG | + | chr1_1:72225857-72225876 | None:intergenic | 30.0% |
| AGAGTAGTTAACTTCTTGAT+AGG | - | chr1_1:72225964-72225983 | Msa0041750:intron | 30.0% | |
| GAGTAGTTAACTTCTTGATA+GGG | - | chr1_1:72225965-72225984 | Msa0041750:intron | 30.0% | |
| CTTACTACTATTACTTCGAT+AGG | + | chr1_1:72226010-72226029 | None:intergenic | 30.0% | |
| AGGAGAGAAAGTTAGAAAAA+GGG | - | chr1_1:72226089-72226108 | Msa0041750:intron | 30.0% | |
| ACAATAATAATAAAGGGCCT+CGG | - | chr1_1:72226134-72226153 | Msa0041750:intron | 30.0% | |
| GACCTAAACATCTAATTTCA+TGG | - | chr1_1:72226198-72226217 | Msa0041750:intron | 30.0% | |
| ! | ACACACTAATTTCTAAAGAC+CGG | - | chr1_1:72226224-72226243 | Msa0041750:intron | 30.0% |
| TACTAGAAGTAAACTCTCAT+CGG | + | chr1_1:72226283-72226302 | None:intergenic | 30.0% | |
| TCGCTTTATGAATTGATGTT+TGG | - | chr1_1:72226444-72226463 | Msa0041750:intron | 30.0% | |
| CGCTTTATGAATTGATGTTT+GGG | - | chr1_1:72226445-72226464 | Msa0041750:intron | 30.0% | |
| GGTTAACAATTATCAAACTG+TGG | + | chr1_1:72226510-72226529 | None:intergenic | 30.0% | |
| !!! | GGTTTATGCTTGTTTTGTTT+AGG | - | chr1_1:72226581-72226600 | Msa0041750:intron | 30.0% |
| TAAAAGGTGAATGTTTATGG+TGG | - | chr1_1:72226768-72226787 | Msa0041750:intron | 30.0% | |
| !! | TTTTAGGAACGAATATATGG+TGG | + | chr1_1:72227052-72227071 | None:intergenic | 30.0% |
| TTCTTTATATGGTCTCAAAC+AGG | + | chr1_1:72227221-72227240 | None:intergenic | 30.0% | |
| ! | AGCAGTAATTTCATTTTGCA+TGG | - | chr1_1:72227603-72227622 | Msa0041750:intron | 30.0% |
| CTTCCAACAATCATGTTTAA+TGG | - | chr1_1:72227630-72227649 | Msa0041750:intron | 30.0% | |
| !! | AGGTTTATGTTTAGTTCTAG+TGG | - | chr1_1:72227822-72227841 | Msa0041750:intron | 30.0% |
| !! | TTTATGTTTAGTTCTAGTGG+AGG | - | chr1_1:72227825-72227844 | Msa0041750:intron | 30.0% |
| GGAGTGATAATATGTAAAGA+AGG | - | chr1_1:72227871-72227890 | Msa0041750:intron | 30.0% | |
| ATATGTAAAGAAGGAGAAAC+AGG | - | chr1_1:72227880-72227899 | Msa0041750:intron | 30.0% | |
| AGATGTGAAATATTGCCAAT+TGG | - | chr1_1:72227933-72227952 | Msa0041750:intron | 30.0% | |
| CAATTGGAAGAAAATTGAGT+GGG | - | chr1_1:72227949-72227968 | Msa0041750:intron | 30.0% | |
| AAAATACCTATGACCATGTA+TGG | - | chr1_1:72228325-72228344 | Msa0041750:intron | 30.0% | |
| ATTGCTAAAGTTTCCATACA+TGG | + | chr1_1:72228341-72228360 | None:intergenic | 30.0% | |
| ATGTATGGAAACTTTAGCAA+TGG | - | chr1_1:72228340-72228359 | Msa0041750:intron | 30.0% | |
| TGTATGGAAACTTTAGCAAT+GGG | - | chr1_1:72228341-72228360 | Msa0041750:intron | 30.0% | |
| TTACTTCACTTAGACATTTG+GGG | + | chr1_1:72228368-72228387 | None:intergenic | 30.0% | |
| ATCAAATTGACCTTGAAATG+AGG | - | chr1_1:72228818-72228837 | Msa0041750:intron | 30.0% | |
| CTTATATTCTCCTCATTTCA+AGG | + | chr1_1:72228831-72228850 | None:intergenic | 30.0% | |
| ATGAGGAGAATATAAGACAT+TGG | - | chr1_1:72228835-72228854 | Msa0041750:intron | 30.0% | |
| ! | ATTGGTGATATGAAAAGAAG+AGG | - | chr1_1:72228853-72228872 | Msa0041750:intron | 30.0% |
| GATATGAAAAGAAGAGGAAA+AGG | - | chr1_1:72228859-72228878 | Msa0041750:intron | 30.0% | |
| !!! | TCTGTTTTAGTACATTATGC+TGG | + | chr1_1:72228893-72228912 | None:intergenic | 30.0% |
| ACTAAAACAGATTGACCATT+TGG | - | chr1_1:72228902-72228921 | Msa0041750:intron | 30.0% | |
| !! | CTCAATGTTACTTTACCAAA+TGG | + | chr1_1:72228920-72228939 | None:intergenic | 30.0% |
| TTTGGTAAAGTAACATTGAG+AGG | - | chr1_1:72228920-72228939 | Msa0041750:intron | 30.0% | |
| TGAGTGAAGTAATGATATAG+AGG | - | chr1_1:72228958-72228977 | Msa0041750:intron | 30.0% | |
| ! | TATTTGGAGTTATTCTTTGG+AGG | - | chr1_1:72229370-72229389 | Msa0041750:intron | 30.0% |
| ATGCTAGAATCTTCAATAGA+AGG | - | chr1_1:72229456-72229475 | Msa0041750:intron | 30.0% | |
| AGAAGGAGAAGTAATAATAG+TGG | - | chr1_1:72229473-72229492 | Msa0041750:intron | 30.0% | |
| ! | GAGTATACTTTGTTGATAGA+AGG | - | chr1_1:72229525-72229544 | Msa0041750:intron | 30.0% |
| ! | AAAAACTCAGGTTTTACTCA+TGG | + | chr1_1:72229559-72229578 | None:intergenic | 30.0% |
| !!! | TTTTGGAGTTGTAAAAACTC+AGG | + | chr1_1:72229571-72229590 | None:intergenic | 30.0% |
| ! | CAAGTCATTCAGTTTTTAAC+TGG | + | chr1_1:72229606-72229625 | None:intergenic | 30.0% |
| ! | GAAGTATTCAAGAACAGATT+TGG | - | chr1_1:72229746-72229765 | Msa0041750:intron | 30.0% |
| AAATCATCAATAGGAGGAAT+TGG | - | chr1_1:72229969-72229988 | Msa0041750:intron | 30.0% | |
| AGAGAAAAACAGAGTATGAT+CGG | - | chr1_1:72230213-72230232 | Msa0041750:intron | 30.0% | |
| TGTAGGTTTCAGAAAATATG+AGG | - | chr1_1:72230710-72230729 | Msa0041750:intron | 30.0% | |
| TCAGAAAATATGAGGAATGT+CGG | - | chr1_1:72230718-72230737 | Msa0041750:intron | 30.0% | |
| TTATGTAGAAAATCAAAGGC+AGG | - | chr1_1:72230898-72230917 | Msa0041750:intron | 30.0% | |
| TAAAGAAATGTCCTTCAAAG+GGG | + | chr1_1:72230970-72230989 | None:intergenic | 30.0% | |
| CTAAAGAAATGTCCTTCAAA+GGG | + | chr1_1:72230971-72230990 | None:intergenic | 30.0% | |
| ACTAAAGAAATGTCCTTCAA+AGG | + | chr1_1:72230972-72230991 | None:intergenic | 30.0% | |
| TACCAATACAGTGGTTTAAT+TGG | + | chr1_1:72231022-72231041 | None:intergenic | 30.0% | |
| AGAAAATGTTACCAATACAG+TGG | + | chr1_1:72231031-72231050 | None:intergenic | 30.0% | |
| !! | TTTTGTTTGTGAATTGTAGG+TGG | - | chr1_1:72231249-72231268 | Msa0041750:intron | 30.0% |
| ! | GTTTTTGCAGCTTCAAATTA+AGG | - | chr1_1:72231312-72231331 | Msa0041750:intron | 30.0% |
| GAAACCCTGCAAAAAGATTT+AGG | - | chr1_1:72224542-72224561 | Msa0041750:CDS | 35.0% | |
| ! | TGCTCCTAAATCTTTTTGCA+GGG | + | chr1_1:72224549-72224568 | None:intergenic | 35.0% |
| ! | ATGCTCCTAAATCTTTTTGC+AGG | + | chr1_1:72224550-72224569 | None:intergenic | 35.0% |
| ! | AAGATTTAGGAGCATACTAG+AGG | - | chr1_1:72224555-72224574 | Msa0041750:CDS | 35.0% |
| TTCTACAAAAAAGCAACGGT+CGG | - | chr1_1:72224707-72224726 | Msa0041750:CDS | 35.0% | |
| AAAAGCCCCTAACAATTACT+TGG | - | chr1_1:72224886-72224905 | Msa0041750:CDS | 35.0% | |
| AAAGCCCCTAACAATTACTT+GGG | - | chr1_1:72224887-72224906 | Msa0041750:CDS | 35.0% | |
| CATAGAAGAGAATGAACACA+AGG | + | chr1_1:72224930-72224949 | None:intergenic | 35.0% | |
| ATCTTCTTCTATCCAAGTTG+GGG | + | chr1_1:72224997-72225016 | None:intergenic | 35.0% | |
| GAAATCTGCTATCTGATCTT+TGG | - | chr1_1:72225048-72225067 | Msa0041750:intron | 35.0% | |
| AGAAACAACTCACTATTTCC+AGG | + | chr1_1:72225273-72225292 | None:intergenic | 35.0% | |
| !! | GGAAATAGTGAGTTGTTTCT+TGG | - | chr1_1:72225273-72225292 | Msa0041750:CDS | 35.0% |
| GTTCATCTCTTCAACTCAAA+GGG | + | chr1_1:72225393-72225412 | None:intergenic | 35.0% | |
| AGTTCATCTCTTCAACTCAA+AGG | + | chr1_1:72225394-72225413 | None:intergenic | 35.0% | |
| AGTTGAAGAGATGAACTTCT+GGG | - | chr1_1:72225397-72225416 | Msa0041750:intron | 35.0% | |
| CTTAAAGGTTGTCATGGTAA+AGG | + | chr1_1:72225433-72225452 | None:intergenic | 35.0% | |
| CTTTACCATGACAACCTTTA+AGG | - | chr1_1:72225431-72225450 | Msa0041750:intron | 35.0% | |
| AGATACCTTAAAGGTTGTCA+TGG | + | chr1_1:72225439-72225458 | None:intergenic | 35.0% | |
| CTTCTATAAGCTGAAATGTC+AGG | - | chr1_1:72225583-72225602 | Msa0041750:intron | 35.0% | |
| CTTGATCTCTTAGAAGATTC+AGG | + | chr1_1:72225685-72225704 | None:intergenic | 35.0% | |
| ! | CTGAATCTTCTAAGAGATCA+AGG | - | chr1_1:72225683-72225702 | Msa0041750:intron | 35.0% |
| !!! | ACTGAAATATTTTTTGGGCC+TGG | + | chr1_1:72225758-72225777 | None:intergenic | 35.0% |
| GGCCCAAAAAATATTTCAGT+TGG | - | chr1_1:72225758-72225777 | Msa0041750:intron | 35.0% | |
| TAAGATAGTGAGAGAGGAAT+TGG | - | chr1_1:72225882-72225901 | Msa0041750:intron | 35.0% | |
| GAGGAGAGAAAGTTAGAAAA+AGG | - | chr1_1:72226088-72226107 | Msa0041750:intron | 35.0% | |
| !!! | AAAGGGAGTTTTATTGCTGA+AGG | - | chr1_1:72226106-72226125 | Msa0041750:intron | 35.0% |
| CAATAATAATAAAGGGCCTC+GGG | - | chr1_1:72226135-72226154 | Msa0041750:intron | 35.0% | |
| AGTAATCATGTCAGCGAAAT+AGG | + | chr1_1:72226312-72226331 | None:intergenic | 35.0% | |
| GATTACTAGAAGATGCATAG+AGG | - | chr1_1:72226325-72226344 | Msa0041750:intron | 35.0% | |
| ATCAATTCATAAAGCGAGAG+CGG | + | chr1_1:72226441-72226460 | None:intergenic | 35.0% | |
| ! | TGAATTGATGTTTGGGATGA+TGG | - | chr1_1:72226452-72226471 | Msa0041750:intron | 35.0% |
| ATTGTTAACCCACGTTAAGA+CGG | - | chr1_1:72226520-72226539 | Msa0041750:intron | 35.0% | |
| TTCTTCGTCTTGGGATTATT+GGG | + | chr1_1:72226624-72226643 | None:intergenic | 35.0% | |
| AGTGCGAAAATACGAAGATA+CGG | + | chr1_1:72226988-72227007 | None:intergenic | 35.0% | |
| GTGAGTTTGCAAACTTGATT+GGG | - | chr1_1:72227244-72227263 | Msa0041750:intron | 35.0% | |
| ATGTAAATGCCAGTGATTGA+TGG | - | chr1_1:72227354-72227373 | Msa0041750:intron | 35.0% | |
| AAAGGATACAACCAGATTGA+AGG | + | chr1_1:72227451-72227470 | None:intergenic | 35.0% | |
| TTCAATCTGGTTGTATCCTT+TGG | - | chr1_1:72227450-72227469 | Msa0041750:intron | 35.0% | |
| AGAGAGATACAAAGCAAGAT+TGG | + | chr1_1:72227479-72227498 | None:intergenic | 35.0% | |
| TCTTGCTTTGTATCTCTCTA+TGG | - | chr1_1:72227480-72227499 | Msa0041750:intron | 35.0% | |
| AAAATCAAGCACAATGCTGA+TGG | + | chr1_1:72227508-72227527 | None:intergenic | 35.0% | |
| ATTACTGCTCTTGAACAAAC+TGG | + | chr1_1:72227592-72227611 | None:intergenic | 35.0% | |
| AGGCCATTAAACATGATTGT+TGG | + | chr1_1:72227636-72227655 | None:intergenic | 35.0% | |
| GGATATGGACAAAGAAAACA+AGG | - | chr1_1:72227684-72227703 | Msa0041750:intron | 35.0% | |
| ! | CCACTCAATTTTCTTCCAAT+TGG | + | chr1_1:72227951-72227970 | None:intergenic | 35.0% |
| CCAATTGGAAGAAAATTGAG+TGG | - | chr1_1:72227948-72227967 | Msa0041750:intron | 35.0% | |
| AGGTGAAATGTAAGGCAAAA+TGG | - | chr1_1:72227972-72227991 | Msa0041750:intron | 35.0% | |
| AACAAAATGGTAGAGTTGAG+AGG | + | chr1_1:72228086-72228105 | None:intergenic | 35.0% | |
| ! | TCAACTCTACCATTTTGTTG+AGG | - | chr1_1:72228087-72228106 | Msa0041750:intron | 35.0% |
| GTTGAAACTCCTCAACAAAA+TGG | + | chr1_1:72228099-72228118 | None:intergenic | 35.0% | |
| AGGCATAAAATGCAGACAAA+AGG | - | chr1_1:72228148-72228167 | Msa0041750:intron | 35.0% | |
| AATGCAGACAAAAGGAATTC+AGG | - | chr1_1:72228156-72228175 | Msa0041750:intron | 35.0% | |
| AAAATCATCAGGTCAGACAA+TGG | + | chr1_1:72228183-72228202 | None:intergenic | 35.0% | |
| ! | TTGTCTGACCTGATGATTTT+AGG | - | chr1_1:72228183-72228202 | Msa0041750:intron | 35.0% |
| ! | TGTCTGACCTGATGATTTTA+GGG | - | chr1_1:72228184-72228203 | Msa0041750:intron | 35.0% |
| CATGTTACCCTAAAATCATC+AGG | + | chr1_1:72228194-72228213 | None:intergenic | 35.0% | |
| AAGTTTCCATACATGGTCAT+AGG | + | chr1_1:72228334-72228353 | None:intergenic | 35.0% | |
| AAAGTGACAAATGTCACAAG+TGG | - | chr1_1:72228448-72228467 | Msa0041750:intron | 35.0% | |
| ACATGATGTATGTACCATAC+AGG | + | chr1_1:72228750-72228769 | None:intergenic | 35.0% | |
| TAGCATAAGTCATAAGCTGA+AGG | - | chr1_1:72228780-72228799 | Msa0041750:intron | 35.0% | |
| AGAAAGAACATGATTGGTGT+TGG | - | chr1_1:72229099-72229118 | Msa0041750:intron | 35.0% | |
| TTGGCTGAAGTAGTATTTGA+TGG | - | chr1_1:72229118-72229137 | Msa0041750:intron | 35.0% | |
| !! | AAGTAGTATTTGATGGTGGA+GGG | - | chr1_1:72229125-72229144 | Msa0041750:intron | 35.0% |
| TCTTCAACTATCTCTCAAAC+TGG | + | chr1_1:72229208-72229227 | None:intergenic | 35.0% | |
| TACTCATACTGTGAATTCAG+AGG | + | chr1_1:72229263-72229282 | None:intergenic | 35.0% | |
| GAATTCACAGTATGAGTAGA+AGG | - | chr1_1:72229265-72229284 | Msa0041750:intron | 35.0% | |
| ! | CAACAGTGTGATTTGTCTTA+TGG | - | chr1_1:72229335-72229354 | Msa0041750:intron | 35.0% |
| ! | GTGATTTGTCTTATGGCAAA+AGG | - | chr1_1:72229342-72229361 | Msa0041750:intron | 35.0% |
| ! | ATGGCAAAAGGTGCAATATT+TGG | - | chr1_1:72229354-72229373 | Msa0041750:intron | 35.0% |
| !! | TCTGAAGCAAGAAAACCTTT+TGG | + | chr1_1:72229423-72229442 | None:intergenic | 35.0% |
| !! | AGTATACTCTCTTGTTGTTC+AGG | + | chr1_1:72229514-72229533 | None:intergenic | 35.0% |
| ! | ACTTTGTTGATAGAAGGAAG+AGG | - | chr1_1:72229531-72229550 | Msa0041750:intron | 35.0% |
| ! | ATCTGCTCGTAATTTTCGTT+TGG | + | chr1_1:72229634-72229653 | None:intergenic | 35.0% |
| GCTATCAACAACTTGAAACA+AGG | + | chr1_1:72229774-72229793 | None:intergenic | 35.0% | |
| GTAACTACTTGATTCACTCT+TGG | + | chr1_1:72229926-72229945 | None:intergenic | 35.0% | |
| CTACGGTTCAAATCATCAAT+AGG | - | chr1_1:72229960-72229979 | Msa0041750:intron | 35.0% | |
| AACAAGCTTTCCTTCATTGA+GGG | + | chr1_1:72230002-72230021 | None:intergenic | 35.0% | |
| TAGTTAGAACCATCAAGAAG+AGG | - | chr1_1:72230065-72230084 | Msa0041750:intron | 35.0% | |
| TTAGTTACACCTCTTCTTGA+TGG | + | chr1_1:72230077-72230096 | None:intergenic | 35.0% | |
| TAGTATGGAGAATTTGTGTC+TGG | - | chr1_1:72230128-72230147 | Msa0041750:intron | 35.0% | |
| AAAAGCCCCTAACAATTACT+TGG | - | chr1_1:72224886-72224905 | Msa0041750:CDS | 35.0% | |
| AAAGCCCCTAACAATTACTT+GGG | - | chr1_1:72224887-72224906 | Msa0041750:CDS | 35.0% | |
| CATAGAAGAGAATGAACACA+AGG | + | chr1_1:72224930-72224949 | None:intergenic | 35.0% | |
| CAGAAAATATGAGGAATGTC+GGG | - | chr1_1:72230719-72230738 | Msa0041750:intron | 35.0% | |
| ! | TCTTTTGGGCTTAGAATTGA+AGG | + | chr1_1:72230862-72230881 | None:intergenic | 35.0% |
| TGCCAATTAAACCACTGTAT+TGG | - | chr1_1:72231017-72231036 | Msa0041750:intron | 35.0% | |
| GCTGCAAAAACTTCACATAT+TGG | + | chr1_1:72231303-72231322 | None:intergenic | 35.0% | |
| TATGCTCCAATTGCTTACAA+CGG | - | chr1_1:72231452-72231471 | Msa0041750:intron | 35.0% | |
| TTCATTCCGTTGTAAGCAAT+TGG | + | chr1_1:72231461-72231480 | None:intergenic | 35.0% | |
| TGCAGCCCAAGTAATTGTTA+GGG | + | chr1_1:72224895-72224914 | None:intergenic | 40.0% | |
| TTGCAGCCCAAGTAATTGTT+AGG | + | chr1_1:72224896-72224915 | None:intergenic | 40.0% | |
| TTTAATATCCCCCCACAAGT+TGG | - | chr1_1:72224950-72224969 | Msa0041750:intron | 40.0% | |
| TTTACCAACCTCCAACTTGT+GGG | + | chr1_1:72224964-72224983 | None:intergenic | 40.0% | |
| ATTTACCAACCTCCAACTTG+TGG | + | chr1_1:72224965-72224984 | None:intergenic | 40.0% | |
| ! | GCAATTTTTCCCTGACTATG+TGG | - | chr1_1:72225104-72225123 | Msa0041750:CDS | 40.0% |
| GATTGATTGCCACATAGTCA+GGG | + | chr1_1:72225116-72225135 | None:intergenic | 40.0% | |
| AGATTGATTGCCACATAGTC+AGG | + | chr1_1:72225117-72225136 | None:intergenic | 40.0% | |
| GCAATCAATCTCCAGATGTT+TGG | - | chr1_1:72225126-72225145 | Msa0041750:CDS | 40.0% | |
| AGCACTCTGGTTATCACAAT+AGG | - | chr1_1:72225186-72225205 | Msa0041750:CDS | 40.0% | |
| TTCTCTGTATTCAGCTTCTG+AGG | - | chr1_1:72225243-72225262 | Msa0041750:CDS | 40.0% | |
| GAAGAAACAATGGCCAGATA+TGG | - | chr1_1:72225324-72225343 | Msa0041750:intron | 40.0% | |
| GAGTTGAAGAGATGAACTTC+TGG | - | chr1_1:72225396-72225415 | Msa0041750:intron | 40.0% | |
| GCTGAAATGTCAGGAAATGA+AGG | - | chr1_1:72225592-72225611 | Msa0041750:intron | 40.0% | |
| ATTAGAAGGATCAGATGGAG+TGG | - | chr1_1:72225636-72225655 | Msa0041750:intron | 40.0% | |
| GAGGTTGCTCATTCAAAGTT+TGG | + | chr1_1:72225736-72225755 | None:intergenic | 40.0% | |
| !!! | GAAATATTTTTTGGGCCTGG+AGG | + | chr1_1:72225755-72225774 | None:intergenic | 40.0% |
| AACCAGTAAGATAGTGAGAG+AGG | - | chr1_1:72225876-72225895 | Msa0041750:intron | 40.0% | |
| TTCCTCTCTCACTATCTTAC+TGG | + | chr1_1:72225881-72225900 | None:intergenic | 40.0% | |
| TCTCTCCAATGGTTACAAAC+AGG | + | chr1_1:72225941-72225960 | None:intergenic | 40.0% | |
| ACTACTCTTCTTCTCTCCAA+TGG | + | chr1_1:72225952-72225971 | None:intergenic | 40.0% | |
| ! | TAAGTTGAACAACTCCCTAG+CGG | + | chr1_1:72226046-72226065 | None:intergenic | 40.0% |
| ATGATAAACCAATGATCCCG+AGG | + | chr1_1:72226154-72226173 | None:intergenic | 40.0% | |
| ! | GTTTAGGTCTTGTCTAGTGA+AGG | + | chr1_1:72226187-72226206 | None:intergenic | 40.0% |
| AACTCTCATCGGACTTTCAT+CGG | + | chr1_1:72226272-72226291 | None:intergenic | 40.0% | |
| TAGATTCACCGTCTTAACGT+GGG | + | chr1_1:72226531-72226550 | None:intergenic | 40.0% | |
| TCTTCGTCTTGGGATTATTG+GGG | + | chr1_1:72226623-72226642 | None:intergenic | 40.0% | |
| CTTCTTCGTCTTGGGATTAT+TGG | + | chr1_1:72226625-72226644 | None:intergenic | 40.0% | |
| TGAGTAGACTTCTTCGTCTT+GGG | + | chr1_1:72226633-72226652 | None:intergenic | 40.0% | |
| ACTCATGTTCATCGTAGACA+TGG | - | chr1_1:72226652-72226671 | Msa0041750:intron | 40.0% | |
| CTCATGTTCATCGTAGACAT+GGG | - | chr1_1:72226653-72226672 | Msa0041750:intron | 40.0% | |
| TCATGTTCATCGTAGACATG+GGG | - | chr1_1:72226654-72226673 | Msa0041750:intron | 40.0% | |
| AAAGCTGCAACAGAGTAACT+TGG | - | chr1_1:72226856-72226875 | Msa0041750:intron | 40.0% | |
| AAGCTGCAACAGAGTAACTT+GGG | - | chr1_1:72226857-72226876 | Msa0041750:intron | 40.0% | |
| TGTCTTGGAGCAAAAGAAAG+AGG | + | chr1_1:72227025-72227044 | None:intergenic | 40.0% | |
| !! | ATATATGGTGGAAGGTGTCT+TGG | + | chr1_1:72227040-72227059 | None:intergenic | 40.0% |
| ! | AGGAACGAATATATGGTGGA+AGG | + | chr1_1:72227048-72227067 | None:intergenic | 40.0% |
| CTTCTCATACCACTTTCTAC+TGG | - | chr1_1:72227195-72227214 | Msa0041750:intron | 40.0% | |
| GGTGAGTTTGCAAACTTGAT+TGG | - | chr1_1:72227243-72227262 | Msa0041750:intron | 40.0% | |
| GTTTACATGACAATACCTCC+TGG | + | chr1_1:72227286-72227305 | None:intergenic | 40.0% | |
| GTAAACAATGCATTCCTGCA+TGG | + | chr1_1:72227325-72227344 | None:intergenic | 40.0% | |
| GAATCTGACTGTAGTGAGTT+TGG | - | chr1_1:72227393-72227412 | Msa0041750:intron | 40.0% | |
| ATACAACCAGATTGAAGGAC+TGG | + | chr1_1:72227446-72227465 | None:intergenic | 40.0% | |
| GAGATACAAAGCAAGATTGG+TGG | + | chr1_1:72227476-72227495 | None:intergenic | 40.0% | |
| CTCTTGAACAAACTGGTACT+TGG | + | chr1_1:72227585-72227604 | None:intergenic | 40.0% | |
| ATGTTTAATGGCCTCAGTGT+AGG | - | chr1_1:72227642-72227661 | Msa0041750:intron | 40.0% | |
| TGAACCTAAAACCTACACTG+AGG | + | chr1_1:72227656-72227675 | None:intergenic | 40.0% | |
| ! | GTTCTAGTGGAGGTTCTAAT+AGG | - | chr1_1:72227835-72227854 | Msa0041750:intron | 40.0% |
| GAAACAGGTTCATCAGCAAA+AGG | - | chr1_1:72227895-72227914 | Msa0041750:intron | 40.0% | |
| TTGGAAGAAAATTGAGTGGG+AGG | - | chr1_1:72227952-72227971 | Msa0041750:intron | 40.0% | |
| ! | AGGCAAAATGGACTCATGAA+AGG | - | chr1_1:72227984-72228003 | Msa0041750:intron | 40.0% |
| CTCATGGCATCATTCATCAA+AGG | + | chr1_1:72228128-72228147 | None:intergenic | 40.0% | |
| TTGATGAATGATGCCATGAG+AGG | - | chr1_1:72228128-72228147 | Msa0041750:intron | 40.0% | |
| ! | TCTGCATTTTATGCCTCTCA+TGG | + | chr1_1:72228144-72228163 | None:intergenic | 40.0% |
| !! | ATGTGAAGGTACTTCAGACT+TGG | - | chr1_1:72228250-72228269 | Msa0041750:intron | 40.0% |
| ! | CATCTGAGACAGTCTTTGAT+TGG | - | chr1_1:72228508-72228527 | Msa0041750:intron | 40.0% |
| !! | TCACAGAGGATGATTGGTTT+GGG | + | chr1_1:72228719-72228738 | None:intergenic | 40.0% |
| ! | ATCACAGAGGATGATTGGTT+TGG | + | chr1_1:72228720-72228739 | None:intergenic | 40.0% |
| GTGAAATCACAGAGGATGAT+TGG | + | chr1_1:72228725-72228744 | None:intergenic | 40.0% | |
| TACAGGATGTGAAATCACAG+AGG | + | chr1_1:72228733-72228752 | None:intergenic | 40.0% | |
| CTGTGATTTCACATCCTGTA+TGG | - | chr1_1:72228733-72228752 | Msa0041750:intron | 40.0% | |
| GCATTAGCAGAAGATGAAAC+AGG | - | chr1_1:72229073-72229092 | Msa0041750:intron | 40.0% | |
| AGGTGCAGAAAGAACATGAT+TGG | - | chr1_1:72229093-72229112 | Msa0041750:intron | 40.0% | |
| GCTGAAGTAGTATTTGATGG+TGG | - | chr1_1:72229121-72229140 | Msa0041750:intron | 40.0% | |
| !! | GAAGTAGTATTTGATGGTGG+AGG | - | chr1_1:72229124-72229143 | Msa0041750:intron | 40.0% |
| !! | AGTAGTATTTGATGGTGGAG+GGG | - | chr1_1:72229126-72229145 | Msa0041750:intron | 40.0% |
| !! | AATTCACAAGGTGTTGCTGT+AGG | + | chr1_1:72229232-72229251 | None:intergenic | 40.0% |
| ACAGCAACACCTTGTGAATT+AGG | - | chr1_1:72229232-72229251 | Msa0041750:intron | 40.0% | |
| GAGGTTGTTCCTAATTCACA+AGG | + | chr1_1:72229244-72229263 | None:intergenic | 40.0% | |
| GAGTTCCCTTGTTAGCATTA+GGG | - | chr1_1:72229287-72229306 | Msa0041750:intron | 40.0% | |
| GGTTTCCCTAATGCTAACAA+GGG | + | chr1_1:72229295-72229314 | None:intergenic | 40.0% | |
| TGGTTTCCCTAATGCTAACA+AGG | + | chr1_1:72229296-72229315 | None:intergenic | 40.0% | |
| GGAGGATAAGAACCAGAATT+AGG | - | chr1_1:72229388-72229407 | Msa0041750:intron | 40.0% | |
| ATTAGGTTTGCACGTCCAAA+AGG | - | chr1_1:72229405-72229424 | Msa0041750:intron | 40.0% | |
| ! | TGCTCGTAATTTTCGTTTGG+AGG | + | chr1_1:72229631-72229650 | None:intergenic | 40.0% |
| CTCATAGATTCACAACGACA+TGG | - | chr1_1:72229654-72229673 | Msa0041750:intron | 40.0% | |
| ! | CACTGAGTTGAAGTCTCTTT+GGG | + | chr1_1:72229727-72229746 | None:intergenic | 40.0% |
| ! | TCACTGAGTTGAAGTCTCTT+TGG | + | chr1_1:72229728-72229747 | None:intergenic | 40.0% |
| GCTTCAAGAACGTTTCTCTA+AGG | + | chr1_1:72229829-72229848 | None:intergenic | 40.0% | |
| AAGCTCTATCCACACATCAA+TGG | - | chr1_1:72229845-72229864 | Msa0041750:intron | 40.0% | |
| ATGAATACGCCATTGATGTG+TGG | + | chr1_1:72229857-72229876 | None:intergenic | 40.0% | |
| ACACATCAATGGCGTATTCA+TGG | - | chr1_1:72229856-72229875 | Msa0041750:intron | 40.0% | |
| TACAACAATCCCAAGCACTA+CGG | - | chr1_1:72229943-72229962 | Msa0041750:intron | 40.0% | |
| TGATTTGAACCGTAGTGCTT+GGG | + | chr1_1:72229955-72229974 | None:intergenic | 40.0% | |
| ATGATTTGAACCGTAGTGCT+TGG | + | chr1_1:72229956-72229975 | None:intergenic | 40.0% | |
| CGGTTCAAATCATCAATAGG+AGG | - | chr1_1:72229963-72229982 | Msa0041750:intron | 40.0% | |
| TGGAATAGATCCCTCAATGA+AGG | - | chr1_1:72229989-72230008 | Msa0041750:intron | 40.0% | |
| GAACAAGCTTTCCTTCATTG+AGG | + | chr1_1:72230003-72230022 | None:intergenic | 40.0% | |
| ! | ACAGAGCTTGGATTTTCACT+AGG | - | chr1_1:72230098-72230117 | Msa0041750:intron | 40.0% |
| TCACTAGGATGCACATAGTA+TGG | - | chr1_1:72230113-72230132 | Msa0041750:intron | 40.0% | |
| AGCTTGAGCTTGAACATCAA+TGG | - | chr1_1:72230374-72230393 | Msa0041750:intron | 40.0% | |
| TTGAGCTTGAACATCAATGG+CGG | - | chr1_1:72230377-72230396 | Msa0041750:intron | 40.0% | |
| TTACTCTCTCTCTTCTTGAG+AGG | + | chr1_1:72230430-72230449 | None:intergenic | 40.0% | |
| TGCAGCCCAAGTAATTGTTA+GGG | + | chr1_1:72224895-72224914 | None:intergenic | 40.0% | |
| TTGCAGCCCAAGTAATTGTT+AGG | + | chr1_1:72224896-72224915 | None:intergenic | 40.0% | |
| ! | TGGCTCATAGAAGCAGATTT+TGG | + | chr1_1:72230751-72230770 | None:intergenic | 40.0% |
| TTCTATGAGCCACAATGAAG+AGG | - | chr1_1:72230759-72230778 | Msa0041750:intron | 40.0% | |
| TCTATGAGCCACAATGAAGA+GGG | - | chr1_1:72230760-72230779 | Msa0041750:intron | 40.0% | |
| ACCTGTGAAAAGCAGTTGTT+GGG | + | chr1_1:72230802-72230821 | None:intergenic | 40.0% | |
| AACCTGTGAAAAGCAGTTGT+TGG | + | chr1_1:72230803-72230822 | None:intergenic | 40.0% | |
| GGTTAACTCTAATCCTTCTC+TGG | - | chr1_1:72230819-72230838 | Msa0041750:intron | 40.0% | |
| !! | AATCCTTCTCTGGAGCAAAA+TGG | - | chr1_1:72230829-72230848 | Msa0041750:intron | 40.0% |
| !! | TAGGTGCTTCAGGTTCTTTT+GGG | + | chr1_1:72230876-72230895 | None:intergenic | 40.0% |
| !! | TTAGGTGCTTCAGGTTCTTT+TGG | + | chr1_1:72230877-72230896 | None:intergenic | 40.0% |
| CTACATAACTTAGGTGCTTC+AGG | + | chr1_1:72230886-72230905 | None:intergenic | 40.0% | |
| TGTAGAAAATCAAAGGCAGG+AGG | - | chr1_1:72230901-72230920 | Msa0041750:intron | 40.0% | |
| ATAAATGCTCTGTGCATCAG+TGG | + | chr1_1:72230935-72230954 | None:intergenic | 40.0% | |
| !!! | TTTCCTCTTGTTTTGTGCAG+AGG | - | chr1_1:72231085-72231104 | Msa0041750:intron | 40.0% |
| TTGCAAACTCTTGTCCCAAA+TGG | - | chr1_1:72231141-72231160 | Msa0041750:intron | 40.0% | |
| TCTTGTCCCAAATGGAACTA+AGG | - | chr1_1:72231149-72231168 | Msa0041750:intron | 40.0% | |
| AAGCCACCTTAGTTCCATTT+GGG | + | chr1_1:72231158-72231177 | None:intergenic | 40.0% | |
| AAAGCCACCTTAGTTCCATT+TGG | + | chr1_1:72231159-72231178 | None:intergenic | 40.0% | |
| !!! | TTTTGAGCTCTGAAGACATG+TGG | - | chr1_1:72231426-72231445 | Msa0041750:intron | 40.0% |
| GCTTACAACGGAATGAACAT+TGG | - | chr1_1:72231464-72231483 | Msa0041750:intron | 40.0% | |
| TTGTTGGAGAAGAAAAGCTG+AGG | + | chr1_1:72231496-72231515 | None:intergenic | 40.0% | |
| GCAGCCCAAGTAATTGTTAG+GGG | + | chr1_1:72224894-72224913 | None:intergenic | 45.0% | |
| TTACCAACCTCCAACTTGTG+GGG | + | chr1_1:72224963-72224982 | None:intergenic | 45.0% | |
| AATGTTGAGCAACCCCAACT+TGG | - | chr1_1:72224982-72225001 | Msa0041750:intron | 45.0% | |
| AGGTTGAGGAAGCAGTGATT+TGG | - | chr1_1:72225021-72225040 | Msa0041750:intron | 45.0% | |
| CTGCAATGTAGATAGCACTC+TGG | - | chr1_1:72225173-72225192 | Msa0041750:CDS | 45.0% | |
| ! | TCTGGCCATTGTTTCTTCCT+TGG | + | chr1_1:72225322-72225341 | None:intergenic | 45.0% |
| GACACTAGAAGGTCCATATC+TGG | + | chr1_1:72225340-72225359 | None:intergenic | 45.0% | |
| ACTTTGAATGAGCAACCTCC+AGG | - | chr1_1:72225737-72225756 | Msa0041750:intron | 45.0% | |
| !! | GTTGATGATGTGATCTTGGC+TGG | + | chr1_1:72225853-72225872 | None:intergenic | 45.0% |
| AGCTGCCTGTTTGTAACCAT+TGG | - | chr1_1:72225933-72225952 | Msa0041750:intron | 45.0% | |
| !! | AGTAAGAGTATCGTTCCGCT+AGG | - | chr1_1:72226028-72226047 | Msa0041750:intron | 45.0% |
| !! | GTAAGAGTATCGTTCCGCTA+GGG | - | chr1_1:72226029-72226048 | Msa0041750:intron | 45.0% |
| ACTTTCATCGGAAAGGTGAG+GGG | + | chr1_1:72226260-72226279 | None:intergenic | 45.0% | |
| GACTTTCATCGGAAAGGTGA+GGG | + | chr1_1:72226261-72226280 | None:intergenic | 45.0% | |
| TCATCGGACTTTCATCGGAA+AGG | + | chr1_1:72226267-72226286 | None:intergenic | 45.0% | |
| TCATGTCAGCGAAATAGGCT+TGG | + | chr1_1:72226307-72226326 | None:intergenic | 45.0% | |
| TCAAACTGTGGAAGCGAAAG+CGG | + | chr1_1:72226498-72226517 | None:intergenic | 45.0% | |
| CTAGATTCACCGTCTTAACG+TGG | + | chr1_1:72226532-72226551 | None:intergenic | 45.0% | |
| GTGAGTAGACTTCTTCGTCT+TGG | + | chr1_1:72226634-72226653 | None:intergenic | 45.0% | |
| CATGTTCATCGTAGACATGG+GGG | - | chr1_1:72226655-72226674 | Msa0041750:intron | 45.0% | |
| !!! | CCCTTTGCTGCTTTTTCTTC+GGG | + | chr1_1:72226883-72226902 | None:intergenic | 45.0% |
| CCCGAAGAAAAAGCAGCAAA+GGG | - | chr1_1:72226880-72226899 | Msa0041750:intron | 45.0% | |
| !!! | CCCCTTTGCTGCTTTTTCTT+CGG | + | chr1_1:72226884-72226903 | None:intergenic | 45.0% |
| CCGAAGAAAAAGCAGCAAAG+GGG | - | chr1_1:72226881-72226900 | Msa0041750:intron | 45.0% | |
| CGAAGAAAAAGCAGCAAAGG+GGG | - | chr1_1:72226882-72226901 | Msa0041750:intron | 45.0% | |
| TGGAGCAAAAGAAAGAGGAC+TGG | + | chr1_1:72227020-72227039 | None:intergenic | 45.0% | |
| TCAAACAGGCCAGTAGAAAG+TGG | + | chr1_1:72227207-72227226 | None:intergenic | 45.0% | |
| ATTCCTGCATGGAGAGTTAC+AGG | + | chr1_1:72227314-72227333 | None:intergenic | 45.0% | |
| CCTTAGCTTCCATCAATCAC+TGG | + | chr1_1:72227366-72227385 | None:intergenic | 45.0% | |
| CCAGTGATTGATGGAAGCTA+AGG | - | chr1_1:72227363-72227382 | Msa0041750:intron | 45.0% | |
| ACTGTAGTGAGTTTGGCTAC+AGG | - | chr1_1:72227400-72227419 | Msa0041750:intron | 45.0% | |
| AGTAGTCCAGTCCTTCAATC+TGG | - | chr1_1:72227437-72227456 | Msa0041750:intron | 45.0% | |
| ! | AAAGCAAGATTGGTGGCCAA+AGG | + | chr1_1:72227469-72227488 | None:intergenic | 45.0% |
| AAGATCCATCTGCACCCTAT+GGG | - | chr1_1:72227529-72227548 | Msa0041750:intron | 45.0% | |
| ! | ATGGCCTCAGTGTAGGTTTT+AGG | - | chr1_1:72227649-72227668 | Msa0041750:intron | 45.0% |
| !!! | GGTTTTAGGTTCAGTGTGAG+TGG | - | chr1_1:72227663-72227682 | Msa0041750:intron | 45.0% |
| AGGTTCAGTGTGAGTGGATA+TGG | - | chr1_1:72227669-72227688 | Msa0041750:intron | 45.0% | |
| ! | CTAGTGGAGGTTCTAATAGG+TGG | - | chr1_1:72227838-72227857 | Msa0041750:intron | 45.0% |
| ! | TGGAGGTTCTAATAGGTGGA+GGG | - | chr1_1:72227842-72227861 | Msa0041750:intron | 45.0% |
| GTTCTAATAGGTGGAGGGTT+AGG | - | chr1_1:72227847-72227866 | Msa0041750:intron | 45.0% | |
| TGAGTGGGAGGTGAAATGTA+AGG | - | chr1_1:72227964-72227983 | Msa0041750:intron | 45.0% | |
| GCACTGTGGCACTTTAGATT+GGG | + | chr1_1:72228542-72228561 | None:intergenic | 45.0% | |
| AGCACTGTGGCACTTTAGAT+TGG | + | chr1_1:72228543-72228562 | None:intergenic | 45.0% | |
| ATGTACCTTCTTCAGCACTG+TGG | + | chr1_1:72228556-72228575 | None:intergenic | 45.0% | |
| GAATCAGAGAGTGAAGTAGC+AGG | - | chr1_1:72228659-72228678 | Msa0041750:intron | 45.0% | |
| GTTTGGGTGAACTCTGTGAT+GGG | + | chr1_1:72228703-72228722 | None:intergenic | 45.0% | |
| ACCTGAGTCTATAAGCCAGT+AGG | - | chr1_1:72229000-72229019 | Msa0041750:intron | 45.0% | |
| CCTGAGTCTATAAGCCAGTA+GGG | - | chr1_1:72229001-72229020 | Msa0041750:intron | 45.0% | |
| TGCATGTTGAATCACCCTAC+TGG | + | chr1_1:72229018-72229037 | None:intergenic | 45.0% | |
| GTAGGGTGATTCAACATGCA+AGG | - | chr1_1:72229018-72229037 | Msa0041750:intron | 45.0% | |
| TGATTCAACATGCAAGGAGC+AGG | - | chr1_1:72229024-72229043 | Msa0041750:intron | 45.0% | |
| TCTTCTGCTAATGCTTCTGC+AGG | + | chr1_1:72229067-72229086 | None:intergenic | 45.0% | |
| GGAGTTCCCTTGTTAGCATT+AGG | - | chr1_1:72229286-72229305 | Msa0041750:intron | 45.0% | |
| TGGACGTGCAAACCTAATTC+TGG | + | chr1_1:72229403-72229422 | None:intergenic | 45.0% | |
| ACAACGACATGGATGAAGAC+AGG | - | chr1_1:72229665-72229684 | Msa0041750:intron | 45.0% | |
| CGTTCTATGAAGCGTGCTTT+AGG | + | chr1_1:72230032-72230051 | None:intergenic | 45.0% | |
| !! | ATGGTTCTAACTACCTCGCT+TGG | + | chr1_1:72230058-72230077 | None:intergenic | 45.0% |
| GGTGTAACTAACACAGAGCT+TGG | - | chr1_1:72230086-72230105 | Msa0041750:intron | 45.0% | |
| GGAGAATTTGTGTCTGGTTG+AGG | - | chr1_1:72230134-72230153 | Msa0041750:intron | 45.0% | |
| GCAGCCCAAGTAATTGTTAG+GGG | + | chr1_1:72224894-72224913 | None:intergenic | 45.0% | |
| CCTGTGAAAAGCAGTTGTTG+GGG | + | chr1_1:72230801-72230820 | None:intergenic | 45.0% | |
| AGAAAATCAAAGGCAGGAGG+TGG | - | chr1_1:72230904-72230923 | Msa0041750:intron | 45.0% | |
| CAAGAGTAAGTCCCCTTTGA+AGG | - | chr1_1:72230956-72230975 | Msa0041750:intron | 45.0% | |
| TCTCCTCTGCACAAAACAAG+AGG | + | chr1_1:72231091-72231110 | None:intergenic | 45.0% | |
| TGTCCCAAATGGAACTAAGG+TGG | - | chr1_1:72231152-72231171 | Msa0041750:intron | 45.0% | |
| GGATATCAGTACCATGCTTG+AGG | - | chr1_1:72231270-72231289 | Msa0041750:intron | 45.0% | |
| !! | TCATTATTTATTTATTTATT+TGG | - | chr1_1:72231393-72231412 | Msa0041750:intron | 5.0% |
| ! | AATATCCCCCCACAAGTTGG+AGG | - | chr1_1:72224953-72224972 | Msa0041750:intron | 50.0% |
| TACCAACCTCCAACTTGTGG+GGG | + | chr1_1:72224962-72224981 | None:intergenic | 50.0% | |
| CCATGAACGCACCAAACATC+TGG | + | chr1_1:72225140-72225159 | None:intergenic | 50.0% | |
| !! | CCAGATGTTTGGTGCGTTCA+TGG | - | chr1_1:72225137-72225156 | Msa0041750:CDS | 50.0% |
| TTGGTGCGTTCATGGAAGAC+TGG | - | chr1_1:72225145-72225164 | Msa0041750:CDS | 50.0% | |
| GCGTTCATGGAAGACTGGAT+TGG | - | chr1_1:72225150-72225169 | Msa0041750:CDS | 50.0% | |
| ! | TTCAGCTTCTGAGGATGACC+TGG | - | chr1_1:72225252-72225271 | Msa0041750:CDS | 50.0% |
| ! | AGGGTACACTGATGCTGACT+GGG | + | chr1_1:72225374-72225393 | None:intergenic | 50.0% |
| ! | AAGGGTACACTGATGCTGAC+TGG | + | chr1_1:72225375-72225394 | None:intergenic | 50.0% |
| GGATCAGATGGAGTGGAAAG+TGG | - | chr1_1:72225643-72225662 | Msa0041750:intron | 50.0% | |
| ATAAAGGGCCTCGGGATCAT+TGG | - | chr1_1:72226143-72226162 | Msa0041750:intron | 50.0% | |
| GGACTTTCATCGGAAAGGTG+AGG | + | chr1_1:72226262-72226281 | None:intergenic | 50.0% | |
| AAACTGTGGAAGCGAAAGCG+GGG | + | chr1_1:72226496-72226515 | None:intergenic | 50.0% | |
| CAAACTGTGGAAGCGAAAGC+GGG | + | chr1_1:72226497-72226516 | None:intergenic | 50.0% | |
| GCCCGAAGAAAAAGCAGCAA+AGG | - | chr1_1:72226879-72226898 | Msa0041750:intron | 50.0% | |
| ACCAAGTCAGAAGCTTGGCA+CGG | + | chr1_1:72226948-72226967 | None:intergenic | 50.0% | |
| !! | TGCCAAGCTTCTGACTTGGT+GGG | - | chr1_1:72226948-72226967 | Msa0041750:intron | 50.0% |
| TTCCCACCAAGTCAGAAGCT+TGG | + | chr1_1:72226953-72226972 | None:intergenic | 50.0% | |
| CTTCCTGTAACTCTCCATGC+AGG | - | chr1_1:72227308-72227327 | Msa0041750:intron | 50.0% | |
| GAAGATCCATCTGCACCCTA+TGG | - | chr1_1:72227528-72227547 | Msa0041750:intron | 50.0% | |
| TCAAACCCATAGGGTGCAGA+TGG | + | chr1_1:72227537-72227556 | None:intergenic | 50.0% | |
| CTCCAGCAGTCAAACCCATA+GGG | + | chr1_1:72227546-72227565 | None:intergenic | 50.0% | |
| ! | GTGGAGGTTCTAATAGGTGG+AGG | - | chr1_1:72227841-72227860 | Msa0041750:intron | 50.0% |
| CTAATAGGTGGAGGGTTAGG+AGG | - | chr1_1:72227850-72227869 | Msa0041750:intron | 50.0% | |
| ! | GGTTCATCAGCAAAAGGTGC+TGG | - | chr1_1:72227901-72227920 | Msa0041750:intron | 50.0% |
| !! | TCAGCAAAAGGTGCTGGAGT+TGG | - | chr1_1:72227907-72227926 | Msa0041750:intron | 50.0% |
| ! | AAGTGCCACAGTGCTGAAGA+AGG | - | chr1_1:72228548-72228567 | Msa0041750:intron | 50.0% |
| GGTTTGGGTGAACTCTGTGA+TGG | + | chr1_1:72228704-72228723 | None:intergenic | 50.0% | |
| !! | CCCTACTGGCTTATAGACTC+AGG | + | chr1_1:72229004-72229023 | None:intergenic | 50.0% |
| !! | TATTTGATGGTGGAGGGGTG+AGG | - | chr1_1:72229131-72229150 | Msa0041750:intron | 50.0% |
| !! | ATTTGATGGTGGAGGGGTGA+GGG | - | chr1_1:72229132-72229151 | Msa0041750:intron | 50.0% |
| GGATGAAGACAGGTGCACAT+AGG | - | chr1_1:72229675-72229694 | Msa0041750:intron | 50.0% | |
| AGACAGGTGCACATAGGCAT+AGG | - | chr1_1:72229681-72229700 | Msa0041750:intron | 50.0% | |
| TCATAGAACGATGCCAAGCG+AGG | - | chr1_1:72230042-72230061 | Msa0041750:intron | 50.0% | |
| GTGTCTGGTTGAGGAGCAAT+TGG | - | chr1_1:72230143-72230162 | Msa0041750:intron | 50.0% | |
| ACGTTAGGCCCTCTTCATTG+TGG | + | chr1_1:72230771-72230790 | None:intergenic | 50.0% | |
| ACAATGAAGAGGGCCTAACG+TGG | - | chr1_1:72230770-72230789 | Msa0041750:intron | 50.0% | |
| !! | CCCCAACAACTGCTTTTCAC+AGG | - | chr1_1:72230798-72230817 | Msa0041750:intron | 50.0% |
| ! | CCTCCATTTTGCTCCAGAGA+AGG | + | chr1_1:72230835-72230854 | None:intergenic | 50.0% |
| !! | CCTTCTCTGGAGCAAAATGG+AGG | - | chr1_1:72230832-72230851 | Msa0041750:intron | 50.0% |
| TTGGACAGCTTCCTCAAGCA+TGG | + | chr1_1:72231284-72231303 | None:intergenic | 50.0% | |
| ACCAACCTCCAACTTGTGGG+GGG | + | chr1_1:72224961-72224980 | None:intergenic | 55.0% | |
| GGTAAGCCACTGCAGTTCAC+AGG | - | chr1_1:72225207-72225226 | Msa0041750:CDS | 55.0% | |
| CTGCTTCCTGTGAACTGCAG+TGG | + | chr1_1:72225216-72225235 | None:intergenic | 55.0% | |
| CTGGCTGCAGAGACACTAGA+AGG | + | chr1_1:72225351-72225370 | None:intergenic | 55.0% | |
| ! | TACACTGATGCTGACTGGGC+TGG | + | chr1_1:72225370-72225389 | None:intergenic | 55.0% |
| AGGGCCAAACCACAAGTGCA+CGG | - | chr1_1:72225984-72226003 | Msa0041750:intron | 55.0% | |
| TAGGCCGTGCACTTGTGGTT+TGG | + | chr1_1:72225991-72226010 | None:intergenic | 55.0% | |
| TTCGATAGGCCGTGCACTTG+TGG | + | chr1_1:72225996-72226015 | None:intergenic | 55.0% | |
| GGTGAGGGGCTAAAGGAAAC+CGG | + | chr1_1:72226246-72226265 | None:intergenic | 55.0% | |
| TCGGAAAGGTGAGGGGCTAA+AGG | + | chr1_1:72226253-72226272 | None:intergenic | 55.0% | |
| CGAGAGCGGAGTCTTGATGT+TGG | + | chr1_1:72226427-72226446 | None:intergenic | 55.0% | |
| AACTGTGGAAGCGAAAGCGG+GGG | + | chr1_1:72226495-72226514 | None:intergenic | 55.0% | |
| AAAGCAGCAAAGGGGGCTTC+TGG | - | chr1_1:72226889-72226908 | Msa0041750:intron | 55.0% | |
| !! | GTGCCAAGCTTCTGACTTGG+TGG | - | chr1_1:72226947-72226966 | Msa0041750:intron | 55.0% |
| GGATGAGAGTGAGAGACACC+AGG | - | chr1_1:72227265-72227284 | Msa0041750:intron | 55.0% | |
| TGAGAGTGAGAGACACCAGG+AGG | - | chr1_1:72227268-72227287 | Msa0041750:intron | 55.0% | |
| CACCCTATGGGTTTGACTGC+TGG | - | chr1_1:72227541-72227560 | Msa0041750:intron | 55.0% | |
| CCTCCAGCAGTCAAACCCAT+AGG | + | chr1_1:72227547-72227566 | None:intergenic | 55.0% | |
| CCTATGGGTTTGACTGCTGG+AGG | - | chr1_1:72227544-72227563 | Msa0041750:intron | 55.0% | |
| GAGGGGTGAGGGATGATTGT+TGG | - | chr1_1:72229143-72229162 | Msa0041750:intron | 55.0% | |
| ! | GGAGCAATTGGTGCTTGACG+AGG | - | chr1_1:72230155-72230174 | Msa0041750:intron | 55.0% |
| ! | GCAATTGGTGCTTGACGAGG+AGG | - | chr1_1:72230158-72230177 | Msa0041750:intron | 55.0% |
| ATGCTCTGTGCATCAGTGGC+AGG | + | chr1_1:72230931-72230950 | None:intergenic | 55.0% | |
| ! | TCCCCCCACAAGTTGGAGGT+TGG | - | chr1_1:72224957-72224976 | Msa0041750:intron | 60.0% |
| ACTGTGGAAGCGAAAGCGGG+GGG | + | chr1_1:72226494-72226513 | None:intergenic | 60.0% | |
| GCCAGTGCCAACATGTGGCA+CGG | + | chr1_1:72226926-72226945 | None:intergenic | 60.0% | |
| GCCGTGCCAAGCTTCTGACT+TGG | - | chr1_1:72226944-72226963 | Msa0041750:intron | 60.0% | |
| GAAGAGGGCCTAACGTGGCA+TGG | - | chr1_1:72230775-72230794 | Msa0041750:intron | 60.0% | |
| TGTTGGGGCCATGCCACGTT+AGG | + | chr1_1:72230786-72230805 | None:intergenic | 60.0% | |
| GCAGCAAAGGGGGCTTCTGG+AGG | - | chr1_1:72226892-72226911 | Msa0041750:intron | 65.0% | |
| ! | GCAAAGGGGGCTTCTGGAGG+TGG | - | chr1_1:72226895-72226914 | Msa0041750:intron | 65.0% |
| GCCGTGCCACATGTTGGCAC+TGG | - | chr1_1:72226922-72226941 | Msa0041750:intron | 65.0% | |
| GCACGGCCAGTGCCAACATG+TGG | + | chr1_1:72226931-72226950 | None:intergenic | 65.0% | |
| ! | GGGGGCTTCTGGAGGTGGCA+CGG | - | chr1_1:72226900-72226919 | Msa0041750:intron | 70.0% |
| GGCACGGCCGTGCCACATGT+TGG | - | chr1_1:72226916-72226935 | Msa0041750:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_1 | gene | 72224496 | 72231520 | 72224496 | ID=Msa0041750;Name=Msa0041750 |
| chr1_1 | mRNA | 72224496 | 72231520 | 72224496 | ID=Msa0041750-mRNA-1;Parent=Msa0041750;Name=Msa0041750-mRNA-1;_AED=0.29;_eAED=0.29;_QI=0|0|0|1|0.75|0.6|5|0|156 |
| chr1_1 | exon | 72231517 | 72231520 | 72231517 | ID=Msa0041750-mRNA-1:exon:24054;Parent=Msa0041750-mRNA-1 |
| chr1_1 | exon | 72225056 | 72225294 | 72225056 | ID=Msa0041750-mRNA-1:exon:24053;Parent=Msa0041750-mRNA-1 |
| chr1_1 | exon | 72224846 | 72224911 | 72224846 | ID=Msa0041750-mRNA-1:exon:24052;Parent=Msa0041750-mRNA-1 |
| chr1_1 | exon | 72224683 | 72224748 | 72224683 | ID=Msa0041750-mRNA-1:exon:24051;Parent=Msa0041750-mRNA-1 |
| chr1_1 | exon | 72224496 | 72224591 | 72224496 | ID=Msa0041750-mRNA-1:exon:24050;Parent=Msa0041750-mRNA-1 |
| chr1_1 | CDS | 72231517 | 72231520 | 72231517 | ID=Msa0041750-mRNA-1:cds;Parent=Msa0041750-mRNA-1 |
| chr1_1 | CDS | 72225056 | 72225294 | 72225056 | ID=Msa0041750-mRNA-1:cds;Parent=Msa0041750-mRNA-1 |
| chr1_1 | CDS | 72224846 | 72224911 | 72224846 | ID=Msa0041750-mRNA-1:cds;Parent=Msa0041750-mRNA-1 |
| chr1_1 | CDS | 72224683 | 72224748 | 72224683 | ID=Msa0041750-mRNA-1:cds;Parent=Msa0041750-mRNA-1 |
| chr1_1 | CDS | 72224496 | 72224591 | 72224496 | ID=Msa0041750-mRNA-1:cds;Parent=Msa0041750-mRNA-1 |
| Gene Sequence |
| Protein sequence |
