AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0051350

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0051350 MtrunA17_Chr1g0154101 94.097 847 40 4 1 845 1 839 0.0 1625
Msa0051350 MtrunA17_Chr1g0154131 59.437 604 111 8 1 602 1 472 0.0 684
Msa0051350 MtrunA17_Chr1g0154131 31.325 332 188 8 504 835 181 472 3.96e-34 137
Msa0051350 MtrunA17_Chr1g0154071 58.706 603 125 8 6 604 9 491 0.0 640
Msa0051350 MtrunA17_Chr1g0154071 62.275 167 58 2 2 168 134 295 2.31e-58 207
Msa0051350 MtrunA17_Chr1g0154071 67.857 140 44 1 159 297 3 142 4.69e-55 198
Msa0051350 MtrunA17_Chr1g0154071 30.636 346 223 9 501 837 154 491 1.71e-32 132
Msa0051350 MtrunA17_Chr1g0154041 78.351 388 80 2 458 845 209 592 0.0 611
Msa0051350 MtrunA17_Chr1g0154041 40.196 102 59 2 183 283 15 115 8.53e-16 81.6
Msa0051350 MtrunA17_Chr1g0154041 34.375 128 72 4 24 151 15 130 7.07e-14 75.5
Msa0051350 MtrunA17_Chr1g0154211 58.744 446 116 5 168 610 7 387 9.26e-174 507
Msa0051350 MtrunA17_Chr1g0154211 78.125 160 34 1 8 167 6 164 2.86e-82 270
Msa0051350 MtrunA17_Chr1g0154211 30.691 391 209 11 501 843 20 396 4.45e-41 155
Msa0051350 MtrunA17_Chr1g0154191 48.052 462 132 7 168 616 6 372 4.79e-132 399
Msa0051350 MtrunA17_Chr1g0154191 76.220 164 39 0 5 168 2 165 1.13e-81 267
Msa0051350 MtrunA17_Chr1g0154191 40.187 321 167 5 542 845 56 368 5.70e-61 211
Msa0051350 MtrunA17_Chr1g0154171 49.327 446 128 5 168 611 7 356 7.61e-127 385
Msa0051350 MtrunA17_Chr1g0154171 73.913 161 35 2 8 168 6 159 7.40e-74 246
Msa0051350 MtrunA17_Chr1g0154171 39.660 353 190 9 501 845 20 357 1.18e-57 201
Msa0051350 MtrunA17_Chr1g0154111 50.113 443 133 8 168 607 10 367 3.49e-126 392
Msa0051350 MtrunA17_Chr1g0154111 78.698 169 34 2 1 168 1 168 2.30e-84 281
Msa0051350 MtrunA17_Chr1g0154111 48.315 267 72 6 197 460 368 571 2.91e-59 212
Msa0051350 MtrunA17_Chr1g0154111 60.606 132 27 3 40 168 368 477 1.29e-38 152
Msa0051350 MtrunA17_Chr1g0154111 31.034 348 194 10 519 840 40 367 3.96e-34 139
Msa0051350 MtrunA17_Chr1g0154151 46.479 426 111 10 197 616 19 333 5.07e-103 322
Msa0051350 MtrunA17_Chr1g0154151 37.764 331 169 10 521 841 20 323 4.10e-52 185
Msa0051350 MtrunA17_Chr1g0154151 68.217 129 30 1 40 168 19 136 1.75e-50 181
Msa0051350 MtrunA17_Chr1g0154241 62.548 259 76 5 165 407 3 256 1.60e-99 310
Msa0051350 MtrunA17_Chr1g0154241 77.019 161 36 1 5 165 2 161 1.21e-83 268
Msa0051350 MtrunA17_Chr1g0154251 44.570 442 184 14 158 588 5 396 1.33e-96 311
Msa0051350 MtrunA17_Chr1g0154251 69.318 176 46 3 1 169 3 177 8.23e-74 250
Msa0051350 MtrunA17_Chr1g0154161 47.959 294 123 5 8 271 13 306 2.95e-75 248
Msa0051350 MtrunA17_Chr1g0154161 81.343 134 23 1 168 299 14 147 4.19e-69 231
Msa0051350 MtrunA17_Chr1g0154161 39.080 348 156 12 501 845 27 321 6.52e-55 192
Msa0051350 MtrunA17_Chr1g0154161 48.241 199 85 2 414 611 139 320 7.30e-49 176
Msa0051350 MtrunA17_Chr1g0154121 70.238 84 23 1 529 610 3 86 2.60e-32 120
Msa0051350 MtrunA17_Chr1g0154121 47.619 84 43 1 760 842 2 85 2.13e-19 84.0
Msa0051350 MtrunA17_Chr6g0464121 60.714 84 31 2 523 604 113 196 1.43e-24 105
Msa0051350 MtrunA17_Chr6g0464121 44.776 67 36 1 763 829 122 187 7.93e-11 64.7
Msa0051350 MtrunA17_Chr4g0033961 24.454 458 297 13 187 639 10 423 2.32e-17 85.5
Msa0051350 MtrunA17_Chr7g0233561 24.611 321 186 11 23 295 16 328 1.07e-16 82.4
Msa0051350 MtrunA17_Chr7g0233561 42.574 101 53 2 492 587 199 299 1.09e-11 67.0
Msa0051350 MtrunA17_Chr7g0233571 32.468 154 87 3 195 332 23 175 1.35e-14 73.9
Msa0051350 MtrunA17_Chr7g0233571 35.789 95 61 0 20 114 5 99 6.35e-13 68.9
Msa0051350 MtrunA17_Chr3g0131891 35.870 92 59 0 23 114 17 108 3.17e-13 72.0
Msa0051350 MtrunA17_Chr3g0131891 36.458 96 58 1 177 272 17 109 7.87e-12 67.8
Msa0051350 MtrunA17_Chr7g0233531 38.667 75 46 0 198 272 2 76 2.18e-12 68.6
Msa0051350 MtrunA17_Chr7g0233531 39.189 74 45 0 41 114 2 75 8.45e-11 63.9
Msa0051350 MtrunA17_Chr1g0162441 39.080 87 52 1 187 272 11 97 3.15e-12 69.7
Msa0051350 MtrunA17_Chr5g0419201 32.456 114 74 1 193 306 27 137 3.86e-12 66.2
Msa0051350 MtrunA17_Chr7g0233541 35.443 79 51 0 198 276 2 80 1.41e-11 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0051350 AT4G33280.1 35.144 313 152 7 11 274 11 321 1.21e-42 159
Msa0051350 AT4G33280.1 49.664 149 69 3 170 314 11 157 8.44e-40 150
Msa0051350 AT4G33280.2 55.385 130 55 2 11 139 11 138 8.97e-41 152
Msa0051350 AT4G33280.2 52.344 128 60 1 170 296 11 138 8.60e-40 149
Msa0051350 AT4G33280.3 55.385 130 55 2 11 139 11 138 8.14e-40 152
Msa0051350 AT4G33280.3 52.344 128 60 1 170 296 11 138 6.48e-39 150
Msa0051350 AT4G34400.2 38.372 86 53 0 39 124 29 114 5.19e-17 84.7
Msa0051350 AT4G34400.2 41.667 84 49 0 196 279 29 112 9.17e-17 84.0
Msa0051350 AT4G34400.1 38.372 86 53 0 39 124 29 114 5.19e-17 84.7
Msa0051350 AT4G34400.1 41.667 84 49 0 196 279 29 112 9.17e-17 84.0
Msa0051350 AT3G06220.1 35.802 81 51 1 196 275 23 103 1.86e-14 72.8
Msa0051350 AT3G06220.1 28.947 114 73 2 37 150 21 126 2.84e-14 72.0
Msa0051350 AT5G66980.1 27.473 273 134 11 37 250 21 288 1.40e-13 73.6
Msa0051350 AT5G66980.1 41.304 92 50 1 184 271 11 102 2.05e-12 69.7
Msa0051350 AT3G06160.1 33.333 93 61 1 184 275 26 118 1.16e-12 70.5
Msa0051350 AT3G06160.1 29.167 120 85 0 39 158 38 157 7.04e-12 68.2
Msa0051350 AT3G06160.5 33.333 93 61 1 184 275 11 103 1.61e-12 70.1
Msa0051350 AT3G06160.5 29.167 120 85 0 39 158 23 142 6.61e-12 68.2
Msa0051350 AT3G06160.4 33.333 93 61 1 184 275 11 103 1.61e-12 70.1
Msa0051350 AT3G06160.4 29.167 120 85 0 39 158 23 142 6.61e-12 68.2
Msa0051350 AT3G06160.3 33.333 93 61 1 184 275 11 103 1.61e-12 70.1
Msa0051350 AT3G06160.3 29.167 120 85 0 39 158 23 142 6.61e-12 68.2
Msa0051350 AT3G06160.2 33.333 93 61 1 184 275 70 162 1.71e-12 70.5
Msa0051350 AT3G06160.2 29.167 120 85 0 39 158 82 201 1.03e-11 68.2
Msa0051350 AT3G18990.2 38.298 94 56 1 22 115 5 96 1.93e-12 70.5
Msa0051350 AT3G18990.2 36.250 80 51 0 193 272 17 96 1.76e-11 67.4
Msa0051350 AT3G18990.1 38.298 94 56 1 22 115 5 96 1.97e-12 70.1
Msa0051350 AT3G18990.1 36.250 80 51 0 193 272 17 96 1.50e-11 67.4
Msa0051350 AT5G60130.5 40.449 89 48 2 39 122 27 115 4.72e-12 67.4
Msa0051350 AT5G60130.5 37.624 101 58 2 184 279 15 115 3.03e-11 65.1
Msa0051350 AT5G60130.2 25.098 255 154 6 39 258 27 279 8.05e-12 67.8
Msa0051350 AT5G60130.2 37.624 101 58 2 184 279 15 115 5.14e-11 65.1
Msa0051350 AT5G60130.3 40.449 89 48 2 39 122 1 89 9.58e-12 67.4
Msa0051350 AT5G60130.4 40.449 89 48 2 39 122 24 112 1.44e-11 67.0
Msa0051350 AT5G60130.4 37.624 101 58 2 184 279 12 112 8.22e-11 64.7
Msa0051350 AT5G60130.1 40.449 89 48 2 39 122 27 115 1.50e-11 67.0
Msa0051350 AT5G60130.1 37.624 101 58 2 184 279 15 115 8.57e-11 64.7
Msa0051350 AT1G49475.1 39.535 86 51 1 187 272 39 123 2.82e-11 63.9

Find 192 sgRNAs with CRISPR-Local

Find 1151 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CACTGTCTTGCGTTCGAAAA+TGG 0.102624 1_2:-5463931 Msa0051350:exon
CAACACCACCGGGACCTTTA+AGG 0.159160 1_2:+5461027 None:intergenic
GACTTCTTCAACAGAATTAT+TGG 0.172022 1_2:+5462123 None:intergenic
CAACTCCACTAGGACCTTTA+AGG 0.178570 1_2:+5462386 None:intergenic
CTGCCTTCCCACTTCTATTC+AGG 0.193161 1_2:+5458647 None:intergenic
CTGAAAATATTTAAGTGAAT+TGG 0.198761 1_2:+5464079 None:intergenic
CGTGATAATGACATCAATTT+TGG 0.202243 1_2:-5456585 Msa0051350:CDS
GTGATGCAAGTTCGTATATC+TGG 0.208858 1_2:-5456528 Msa0051350:CDS
TGAAATGAATGAACTGAAAA+TGG 0.212602 1_2:+5463859 None:intergenic
TAAATTGTCTGAAAATGTTT+TGG 0.223184 1_2:+5462435 None:intergenic
CCATCCATTTGTGAAGTAAA+TGG 0.223284 1_2:+5462330 None:intergenic
CGGTGGTGGTTTGAAGAAAT+TGG 0.224658 1_2:+5463835 None:intergenic
TAACAGACTTCTTGGTCTTT+TGG 0.233797 1_2:+5460333 None:intergenic
CCAGAAAATGTGACCCTTAA+AGG 0.236805 1_2:-5461041 Msa0051350:CDS
GGTGGTGTTGCATGGAAAAT+AGG 0.237795 1_2:-5461014 Msa0051350:CDS
CCAGACAATGTGACCCTTAA+AGG 0.245088 1_2:-5462400 Msa0051350:CDS
AAGTTGTTGCTTAAAATCTT+TGG 0.248017 1_2:+5461994 None:intergenic
AACTTCATTAACAGACTTCT+TGG 0.252529 1_2:+5460325 None:intergenic
GAAGGTCTTGATCATCAAAA+TGG 0.258424 1_2:-5456495 Msa0051350:CDS
GAGAAAGTTGCAAGCTGTTC+TGG 0.273381 1_2:+5463990 None:intergenic
TGAAATGGATGAACTGAAAA+TGG 0.274129 1_2:+5462029 None:intergenic
TGTTGAACGTCCACGTATTC+TGG 0.284407 1_2:-5458503 Msa0051350:intron
CTTGGGAGAAAGAGATTTAC+TGG 0.286889 1_2:-5463884 Msa0051350:CDS
CTTATTTCATGTACATTTAG+TGG 0.290455 1_2:-5446457 Msa0051350:three_prime_UTR
CATTCAACACCGCCATTAGA+AGG 0.297179 1_2:+5462094 None:intergenic
TGGTTTATATGAGAAATTTC+AGG 0.307206 1_2:-5460712 Msa0051350:CDS
CCTACCAACCAACCGGAAAA+AGG 0.307983 1_2:-5460551 Msa0051350:CDS
CTTGCATGCAATCTAGTTCT+AGG 0.336549 1_2:+5457692 None:intergenic
TTTCAGGATCTTAACAATAT+AGG 0.337128 1_2:-5460696 Msa0051350:CDS
ATGTACATTTAGTGGCTTGA+TGG 0.344466 1_2:-5446449 Msa0051350:three_prime_UTR
CATGGGAGGAAGACATTTAC+TGG 0.353390 1_2:-5462054 Msa0051350:CDS
ATGTTTCTTCGGCATAAATC+TGG 0.355077 1_2:+5457466 None:intergenic
GCATAAATCTGGAAGTCTTA+TGG 0.355261 1_2:+5457477 None:intergenic
CCCCTAGTTCAGTTTGAGTA+TGG 0.362232 1_2:+5460805 None:intergenic
CCTTTAAGGGTCACATTGTC+TGG 0.362859 1_2:+5462400 None:intergenic
TGAAAATATTTAAGTGAATT+GGG 0.363563 1_2:+5464080 None:intergenic
GAACAGCTTGCAACTTTCTC+TGG 0.365209 1_2:-5463987 Msa0051350:five_prime_UTR
CATGAACGTTGGCAGGTAGA+TGG 0.366801 1_2:+5456444 None:intergenic
AGTTGTTGCTTAAAATCTTT+GGG 0.367729 1_2:+5461995 None:intergenic
ATAATCTTTATCTTGCAGTT+TGG 0.369783 1_2:+5457758 None:intergenic
GTTGTTTCCCCTTGAACATA+TGG 0.370462 1_2:+5456645 None:intergenic
ATCAATGAGGTTGGAAAAGA+TGG 0.373789 1_2:-5457563 Msa0051350:CDS
CTGGCGAGAGAGCAATTGAT+TGG 0.381570 1_2:-5460253 Msa0051350:CDS
CGACATCAGCTAATTGTTGT+TGG 0.381642 1_2:-5460512 Msa0051350:CDS
TCCTTGTCTTTAAGTACAAT+GGG 0.391820 1_2:-5462267 Msa0051350:CDS
TGGGAAGAAGTTGGGTGAAA+TGG 0.393018 1_2:+5462014 None:intergenic
TAAAATCTTTGGGAAGAAGT+TGG 0.393785 1_2:+5462005 None:intergenic
AAAATCTTTGGGAAGAAGTT+GGG 0.404051 1_2:+5462006 None:intergenic
ACTGTCTTGCGTTCGAAAAT+GGG 0.407987 1_2:-5463930 Msa0051350:exon
TACAGACATCTCCAATCTTT+AGG 0.410316 1_2:+5457624 None:intergenic
GTGGTGTTGCATGGAAAATA+GGG 0.415820 1_2:-5461013 Msa0051350:CDS
AACACCACCGGGACCTTTAA+GGG 0.419570 1_2:+5461028 None:intergenic
CAGGTGGAAGCAGCAAATCT+TGG 0.421511 1_2:-5463902 Msa0051350:CDS
CACAAGTTGGTGTTGAAAAT+CGG 0.423928 1_2:+5463815 None:intergenic
GATACCATTTACTTCACAAA+TGG 0.426840 1_2:-5462334 Msa0051350:CDS
CGAAGTATTTGAAGCTCTAC+CGG 0.428217 1_2:+5457346 None:intergenic
GTATCAGCTATGAACTGCTC+AGG 0.438283 1_2:+5460603 None:intergenic
TTTAACAAAATATGGAAAAG+AGG 0.438354 1_2:+5458543 None:intergenic
GTTTCAACAGGTACAGATAA+TGG 0.438533 1_2:+5460669 None:intergenic
TTCCTTGTCTTTAAGTACAA+TGG 0.443680 1_2:-5462268 Msa0051350:CDS
TGATCCTTCGAAAATTCATA+TGG 0.444278 1_2:+5457785 None:intergenic
CTTCCCACTTCTATTCAGGT+TGG 0.446295 1_2:+5458651 None:intergenic
GTTGTTGGAGAGCACTTGAC+TGG 0.446323 1_2:-5460497 Msa0051350:CDS
CCCCGCTTCTTACTCCGGCC+AGG 0.453081 1_2:+5460299 None:intergenic
GAAAAGAGGAGGTAAATGAT+TGG 0.467251 1_2:+5458557 None:intergenic
TGATGCAAGTTCGTATATCT+GGG 0.468535 1_2:-5456527 Msa0051350:CDS
GAAGTCAATACTGCTTCTAA+TGG 0.478633 1_2:-5460747 Msa0051350:CDS
AACTCCACTAGGACCTTTAA+GGG 0.479312 1_2:+5462387 None:intergenic
GTCTTCCCCGCTTCTTACTC+CGG 0.480070 1_2:+5460294 None:intergenic
TTGTTTCCCCTTGAACATAT+GGG 0.482916 1_2:+5456646 None:intergenic
GCCTGGCCGGAGTAAGAAGC+GGG 0.483099 1_2:-5460300 Msa0051350:CDS
TCCTCCGAGTTAAAGAAATC+CGG 0.486765 1_2:-5457365 Msa0051350:CDS
GAAGTCAGTACCCCTTCTAA+TGG 0.487636 1_2:-5462106 Msa0051350:CDS
CGTGTTCGCATCAATGAGGT+TGG 0.490884 1_2:-5457572 Msa0051350:CDS
AAGGTCTTGATCATCAAAAT+GGG 0.492524 1_2:-5456494 Msa0051350:CDS
AGGTGGAAGCAGCAAATCTT+GGG 0.493263 1_2:-5463901 Msa0051350:CDS
TTCCTTGTCTTTAATTACAA+TGG 0.493431 1_2:-5460909 Msa0051350:CDS
GGAGATGTGCAGTAGAGAAC+TGG 0.495082 1_2:+5456733 None:intergenic
TAGTATGCTTAGTGCAAGAC+AGG 0.498724 1_2:-5457510 Msa0051350:CDS
TCACAAACATGAACGTTGGC+AGG 0.500996 1_2:+5456437 None:intergenic
ATCTTCCTCGTGAACTGTTG+AGG 0.502401 1_2:-5464042 Msa0051350:five_prime_UTR
AAAAGATGGGTTAGACTCCC+AGG 0.502465 1_2:-5457549 Msa0051350:CDS
CGTTCGAAAATGGGAGGAGC+AGG 0.503660 1_2:-5463921 Msa0051350:exon
TCAAATACTTCGAAGAAGGC+AGG 0.504134 1_2:-5457335 Msa0051350:CDS
GATTATTCTTCATAATTTGA+AGG 0.504582 1_2:-5457741 Msa0051350:CDS
CGTGGCAATAGCCTAAAGAT+TGG 0.505082 1_2:-5457635 Msa0051350:CDS
AACTCCGTCCCATATGTTCA+AGG 0.509291 1_2:-5456654 Msa0051350:CDS
AAAAGAGGAGGTAAATGATT+GGG 0.509472 1_2:+5458558 None:intergenic
ATGAACGTTGGCAGGTAGAT+GGG 0.511344 1_2:+5456445 None:intergenic
GTGGAGTTGTGTGGAATGTC+GGG 0.511439 1_2:-5462372 Msa0051350:CDS
ATTATTCTTCATAATTTGAA+GGG 0.512712 1_2:-5457740 Msa0051350:CDS
GCAATTCAAGAGGCAAATGT+TGG 0.513221 1_2:-5456683 Msa0051350:CDS
GCCATACTCAAACTGAACTA+GGG 0.513331 1_2:-5460806 Msa0051350:CDS
GGCCATACTCAAACTGAACT+AGG 0.514000 1_2:-5460807 Msa0051350:CDS
CAGTTTCCCTACCAACCAAC+CGG 0.519266 1_2:-5460558 Msa0051350:CDS
AGGAAACACCATGTTGATGA+TGG 0.520128 1_2:-5456998 Msa0051350:CDS
CCCCATTGTACTTAAAGACA+AGG 0.522025 1_2:+5462266 None:intergenic
AGTGGAGTTGTGTGGAATGT+CGG 0.523559 1_2:-5462373 Msa0051350:CDS
TCTGTTAATGAAGTTACGCC+TGG 0.524578 1_2:-5460317 Msa0051350:CDS
ATGAAAGTGACTCTAATAGT+TGG 0.526467 1_2:+5446514 None:intergenic
TGGCGAGAGAGCAATTGATT+GGG 0.530749 1_2:-5460252 Msa0051350:CDS
TGGAGATAGTTTCTGTGAGA+AGG 0.531697 1_2:-5462215 Msa0051350:CDS
GTAACTTCTGTATTGCAAGC+AGG 0.534058 1_2:+5456711 None:intergenic
GAAATGAATGAACTGAAAAT+GGG 0.535326 1_2:+5463860 None:intergenic
CTGTTTACTTCGTGGACGGT+TGG 0.535957 1_2:-5460971 Msa0051350:CDS
CACCATTGTAATTAAAGACA+AGG 0.542064 1_2:+5460907 None:intergenic
GTTCTGGACGAGAAGAGAAA+AGG 0.544325 1_2:+5464006 None:intergenic
AGACGATACTGTTTACTTCG+TGG 0.544423 1_2:-5460979 Msa0051350:CDS
TATCAGCTATGAACTGCTCA+GGG 0.548226 1_2:+5460604 None:intergenic
TTAATGAAGTTACGCCTGGC+CGG 0.549314 1_2:-5460313 Msa0051350:CDS
AAGGTCCCGGTGGTGTTGCA+TGG 0.549921 1_2:-5461022 Msa0051350:CDS
CAAGTTCGTATATCTGGGGT+TGG 0.550226 1_2:-5456522 Msa0051350:CDS
ATTCAACACCGCCATTAGAA+GGG 0.552091 1_2:+5462095 None:intergenic
AGTTCTAGGAACAGAATTGA+CGG 0.553971 1_2:+5457706 None:intergenic
TCTAATGGTGGTGTTGAATG+TGG 0.555737 1_2:-5460732 Msa0051350:CDS
CCATTTACTTCACAAATGGA+TGG 0.556295 1_2:-5462330 Msa0051350:CDS
AGCTTCAAATACTTCGAAGA+AGG 0.556522 1_2:-5457339 Msa0051350:CDS
AATAGAAGTGGGAAGGCAGA+TGG 0.559991 1_2:-5458643 Msa0051350:CDS
TTTCAAACTATCATTAGCCT+GGG 0.560665 1_2:+5456967 None:intergenic
TCGAAAATGGGAGGAGCAGG+TGG 0.561657 1_2:-5463918 Msa0051350:exon
TCGTATATCTGGGGTTGGAA+AGG 0.561748 1_2:-5456517 Msa0051350:CDS
ATATCTGGGGTTGGAAAGGA+AGG 0.562175 1_2:-5456513 Msa0051350:CDS
TGATTGGGTGGCTTGTAACA+AGG 0.569869 1_2:-5460237 Msa0051350:CDS
GAAATGGATGAACTGAAAAT+GGG 0.570637 1_2:+5462030 None:intergenic
GCTATCTCTTTCTCATCATG+TGG 0.571214 1_2:+5458580 None:intergenic
GTTACGCTTCGCAATTCAAG+AGG 0.575759 1_2:-5456693 Msa0051350:CDS
AATGTGACCCTTAAAGGTCC+CGG 0.577654 1_2:-5461035 Msa0051350:CDS
ATGAAGAAGTTCAATGTCTG+TGG 0.577831 1_2:-5456872 Msa0051350:CDS
AAGCTCCACTGAGAATATCA+TGG 0.579465 1_2:+5458620 None:intergenic
TACTGAACAAGGGTGTAACA+AGG 0.579623 1_2:-5462155 Msa0051350:CDS
GGACAAGCTCATACTGAACA+AGG 0.580719 1_2:-5462166 Msa0051350:CDS
TTGGAGAGCACTTGACTGGG+TGG 0.581287 1_2:-5460493 Msa0051350:CDS
CGAGAGAGCAATTGATTGGG+TGG 0.581381 1_2:-5460249 Msa0051350:CDS
ACATTCCACACAACTCCACT+AGG 0.582408 1_2:+5462376 None:intergenic
CAAATACTTCGAAGAAGGCA+GGG 0.582811 1_2:-5457334 Msa0051350:CDS
TCATCAACATGGTGTTTCCT+CGG 0.584118 1_2:+5457001 None:intergenic
AACAAAATATGGAAAAGAGG+AGG 0.585641 1_2:+5458546 None:intergenic
CGCCTGGCCGGAGTAAGAAG+CGG 0.586085 1_2:-5460301 Msa0051350:CDS
TTGTTGGAGAGCACTTGACT+GGG 0.586591 1_2:-5460496 Msa0051350:CDS
GTCACATTCTATGCGGAGGA+TGG 0.588116 1_2:-5457670 Msa0051350:CDS
CTCCGTCCCATATGTTCAAG+GGG 0.588313 1_2:-5456652 Msa0051350:CDS
TAACTTCTGTATTGCAAGCA+GGG 0.589388 1_2:+5456712 None:intergenic
TGTGCAGTAGAGAACTGGCA+TGG 0.592258 1_2:+5456738 None:intergenic
GTCAATACTGCTTCTAATGG+TGG 0.593959 1_2:-5460744 Msa0051350:CDS
TTTCACAAAATAAGGAAATG+GGG 0.593994 1_2:+5456898 None:intergenic
GATGTCATTATCACGAACAA+AGG 0.594099 1_2:+5456593 None:intergenic
GACGAGAAGAGAAAAGGTAC+AGG 0.595047 1_2:+5464012 None:intergenic
GCAGCCAACCTGAATAGAAG+TGG 0.595897 1_2:-5458655 Msa0051350:CDS
GATGGGTTAGACTCCCAGGT+TGG 0.599922 1_2:-5457545 Msa0051350:CDS
TTCCCCTTGAACATATGGGA+CGG 0.601024 1_2:+5456650 None:intergenic
GCTTATAACAAGCAACACTC+AGG 0.608918 1_2:-5460471 Msa0051350:intron
TTGGTGTTGAAAATCGGTGG+TGG 0.610490 1_2:+5463821 None:intergenic
ACCGGATTTCTTTAACTCGG+AGG 0.613173 1_2:+5457364 None:intergenic
TCTACCGGATTTCTTTAACT+CGG 0.613816 1_2:+5457361 None:intergenic
ACTCCGTCCCATATGTTCAA+GGG 0.617467 1_2:-5456653 Msa0051350:CDS
CAACCTGAATAGAAGTGGGA+AGG 0.620093 1_2:-5458650 Msa0051350:CDS
TTCTGATGTAGTCACTATAG+CGG 0.623932 1_2:-5460375 Msa0051350:intron
AAGGTCCTAGTGGAGTTGTG+TGG 0.624686 1_2:-5462381 Msa0051350:CDS
TGATGATGGACTAAGCTCCC+AGG 0.628271 1_2:-5456984 Msa0051350:CDS
TTCAACACCGCCATTAGAAG+GGG 0.628995 1_2:+5462096 None:intergenic
GTGACCCTTAAAGGTCCTAG+TGG 0.630968 1_2:-5462391 Msa0051350:CDS
TTTCTCACAAACATGAACGT+TGG 0.631675 1_2:+5456433 None:intergenic
GAACAACTCACCAGAATACG+TGG 0.631909 1_2:+5458493 None:intergenic
CCATACTCAAACTGAACTAG+GGG 0.634393 1_2:-5460805 Msa0051350:CDS
ATTACGTGTTCGCATCAATG+AGG 0.634490 1_2:-5457576 Msa0051350:CDS
GCTTGTAACAAGGAAAACTC+AGG 0.638956 1_2:-5460227 Msa0051350:intron
GTCAGTACCCCTTCTAATGG+CGG 0.640016 1_2:-5462103 Msa0051350:CDS
GATACTGTTTACTTCGTGGA+CGG 0.642050 1_2:-5460975 Msa0051350:CDS
CAGCCAACCTGAATAGAAGT+GGG 0.642084 1_2:-5458654 Msa0051350:CDS
TCAATGAGGTTGGAAAAGAT+GGG 0.644296 1_2:-5457562 Msa0051350:CDS
GTCTTGCGTTCGAAAATGGG+AGG 0.647583 1_2:-5463927 Msa0051350:exon
AGCTTAGTCCATCATCAACA+TGG 0.648752 1_2:+5456990 None:intergenic
GCAAGTCACATTCTATGCGG+AGG 0.649025 1_2:-5457674 Msa0051350:CDS
GTAGGGAAACTGTATAGCTG+TGG 0.649466 1_2:+5460569 None:intergenic
ACTGAACAAGGGTGTAACAA+GGG 0.652043 1_2:-5462154 Msa0051350:CDS
ATAATTTGAAGGGAGAACAG+TGG 0.652096 1_2:-5457730 Msa0051350:CDS
GTGCAGTAGAGAACTGGCAT+GGG 0.660376 1_2:+5456739 None:intergenic
TTAAGCCTCAACAGTTCACG+AGG 0.665138 1_2:+5464037 None:intergenic
CCTTGTCTTTAAGTACAATG+GGG 0.669263 1_2:-5462266 Msa0051350:CDS
CAATGAAGATGTATATGTTG+TGG 0.673119 1_2:-5456396 Msa0051350:three_prime_UTR
GATGGCCATGATATTCTCAG+TGG 0.691057 1_2:-5458625 Msa0051350:CDS
GACAAGCTCATACTGAACAA+GGG 0.699080 1_2:-5462165 Msa0051350:CDS
TGTCTGTGGATCATACACTT+TGG 0.709889 1_2:-5456858 Msa0051350:intron
AAGTTGGTGTTGAAAATCGG+TGG 0.713794 1_2:+5463818 None:intergenic
GTGACCCTTAAAGGTCCCGG+TGG 0.715661 1_2:-5461032 Msa0051350:CDS
CCTGGCCGGAGTAAGAAGCG+GGG 0.719494 1_2:-5460299 Msa0051350:CDS
AAACAAAGACAGCTGTACCG+AGG 0.720792 1_2:-5457018 Msa0051350:intron
CATGCAAGTCACATTCTATG+CGG 0.736069 1_2:-5457677 Msa0051350:CDS
ATCAGCTATGAACTGCTCAG+GGG 0.739451 1_2:+5460605 None:intergenic
AATCAGCTCAAAGTGCAGTG+CGG 0.745608 1_2:-5457441 Msa0051350:CDS
GATGCAAGTTCGTATATCTG+GGG 0.759019 1_2:-5456526 Msa0051350:CDS
CATACTCAAACTGAACTAGG+GGG 0.777970 1_2:-5460804 Msa0051350:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTTAAAAAAAAAAATTAAT+TGG + chr1_2:5460578-5460597 None:intergenic 0.0%
!!! ATTAATTTTTTTTTTTAAAT+AGG - chr1_2:5460578-5460597 Msa0051350:CDS 0.0%
!!! TTTCTTAGAAATAAAATTTT+GGG + chr1_2:5451261-5451280 None:intergenic 10.0%
!!! TTCATTATTTTAACAAAATA+TGG + chr1_2:5451989-5452008 None:intergenic 10.0%
!!! ATAAAAGTATAAATATTGTT+TGG + chr1_2:5452182-5452201 None:intergenic 10.0%
!!! AATATTTATACTTTTATGTA+TGG - chr1_2:5452185-5452204 Msa0051350:intron 10.0%
!!! TTTTTTGTTTTAAGTTTATT+TGG - chr1_2:5452609-5452628 Msa0051350:intron 10.0%
!!! TTTTTGTTTTAAGTTTATTT+GGG - chr1_2:5452610-5452629 Msa0051350:intron 10.0%
!! TAATCCTATTTATTAATATA+TGG - chr1_2:5454699-5454718 Msa0051350:intron 10.0%
!!! TTTTTTAATAAATAGTTTAG+TGG - chr1_2:5455700-5455719 Msa0051350:intron 10.0%
!! AAATAAGAAAAAATTGAAAA+AGG + chr1_2:5456291-5456310 None:intergenic 10.0%
!! AAAGATAAAAAAATTCAAAA+AGG + chr1_2:5456772-5456791 None:intergenic 10.0%
!!! TTGATTATTTTAACAAAATA+TGG + chr1_2:5458630-5458649 None:intergenic 10.0%
!! TTAAAAAAAAAACATAACAT+GGG + chr1_2:5460481-5460500 None:intergenic 10.0%
!! TTTAAAAAAAAAACATAACA+TGG + chr1_2:5460482-5460501 None:intergenic 10.0%
!!! ATTGTTTTTTTTTTTTTTTG+AGG + chr1_2:5460763-5460782 None:intergenic 10.0%
!!! TTTTTAAAATCTATAACAAA+CGG - chr1_2:5460859-5460878 Msa0051350:CDS 10.0%
!! AGATACAAAATTTAAAAAGT+GGG + chr1_2:5446775-5446794 None:intergenic 15.0%
!! AAGATACAAAATTTAAAAAG+TGG + chr1_2:5446776-5446795 None:intergenic 15.0%
!!! TATATATTTTACTTGTTCAT+AGG - chr1_2:5447198-5447217 Msa0051350:intron 15.0%
!! GATAAAAAAAAATAAAAGGT+GGG + chr1_2:5448702-5448721 None:intergenic 15.0%
!! AGATAAAAAAAAATAAAAGG+TGG + chr1_2:5448703-5448722 None:intergenic 15.0%
!!! ATATGCTTGTTTTTAAATAA+TGG - chr1_2:5449056-5449075 Msa0051350:intron 15.0%
!!! TATGCTTGTTTTTAAATAAT+GGG - chr1_2:5449057-5449076 Msa0051350:intron 15.0%
!! TTAATATAGTAAAAGTTAAG+TGG + chr1_2:5450096-5450115 None:intergenic 15.0%
!!! AAAATAACATACTTTTTGAT+AGG - chr1_2:5450765-5450784 Msa0051350:intron 15.0%
!!! AAATAACATACTTTTTGATA+GGG - chr1_2:5450766-5450785 Msa0051350:intron 15.0%
!!! GTTTCTTAGAAATAAAATTT+TGG + chr1_2:5451262-5451281 None:intergenic 15.0%
!!! AAGAACTAATTTGTTTAAAT+AGG - chr1_2:5451591-5451610 Msa0051350:intron 15.0%
!! AGATAAAAACAACATTATTT+GGG + chr1_2:5452078-5452097 None:intergenic 15.0%
!! AAAACAAAAAATATTTGAGA+AGG + chr1_2:5452600-5452619 None:intergenic 15.0%
!! ATTATTCTTCATAATTTGAA+GGG - chr1_2:5452781-5452800 Msa0051350:intron 15.0%
!!! GAAGAATATAATTCAATTTT+CGG - chr1_2:5453363-5453382 Msa0051350:intron 15.0%
!!! TTTTTTTTTGTTTTTGACAT+TGG - chr1_2:5454445-5454464 Msa0051350:intron 15.0%
!! AAAAATATTACGGAAAAAAA+AGG - chr1_2:5454611-5454630 Msa0051350:intron 15.0%
!! ACAACCATATATTAATAAAT+AGG + chr1_2:5454706-5454725 None:intergenic 15.0%
!!! TATTTTTCCTAATATTTAGT+AGG + chr1_2:5455338-5455357 None:intergenic 15.0%
!!! ATTGATTTCAATGATAAAAT+TGG + chr1_2:5455771-5455790 None:intergenic 15.0%
!!! ATTATTGGTTATATAGTTTA+GGG - chr1_2:5456387-5456406 Msa0051350:three_prime_UTR 15.0%
!!! ATATGCTTGTTTTTAAATAA+TGG - chr1_2:5449056-5449075 Msa0051350:intron 15.0%
!!! TTAGTTCATTTTAATAGTTT+AGG - chr1_2:5456694-5456713 Msa0051350:CDS 15.0%
!!! TAGTTCATTTTAATAGTTTA+GGG - chr1_2:5456695-5456714 Msa0051350:CDS 15.0%
!! ATAAAAAAATTCAAAAAGGT+GGG + chr1_2:5456768-5456787 None:intergenic 15.0%
!! ATAAATTAAGAATCACAAAA+GGG + chr1_2:5458694-5458713 None:intergenic 15.0%
!! TATAAATTAAGAATCACAAA+AGG + chr1_2:5458695-5458714 None:intergenic 15.0%
!! ATTATTCTTCATAATATGAA+GGG - chr1_2:5459363-5459382 Msa0051350:intron 15.0%
!! TAGTTAATCATTAGTTAATT+GGG + chr1_2:5460207-5460226 None:intergenic 15.0%
!! ATAGTTAATCATTAGTTAAT+TGG + chr1_2:5460208-5460227 None:intergenic 15.0%
!!! TTTTTTTTTTTAAATAGGCA+AGG - chr1_2:5460583-5460602 Msa0051350:CDS 15.0%
!!! TTTTTTTTTTAAATAGGCAA+GGG - chr1_2:5460584-5460603 Msa0051350:CDS 15.0%
!!! GTAAACCAATTTTTTTTAAA+TGG + chr1_2:5460885-5460904 None:intergenic 15.0%
!!! AAAAATTGGTTTACTTTTTT+AGG - chr1_2:5460891-5460910 Msa0051350:CDS 15.0%
!!! AAAATTGGTTTACTTTTTTA+GGG - chr1_2:5460892-5460911 Msa0051350:CDS 15.0%
!! TATAAATACAAATTTCACAA+CGG + chr1_2:5461032-5461051 None:intergenic 15.0%
!! AAAATAAGTCTCATATAAAA+TGG + chr1_2:5461133-5461152 None:intergenic 15.0%
!! TTTGACAAAAAAAAGAAAAT+GGG - chr1_2:5461167-5461186 Msa0051350:intron 15.0%
!! ATAAAAATAAGACAACAATA+AGG - chr1_2:5461262-5461281 Msa0051350:intron 15.0%
!!! ACACAATTACTTTAAAATAA+GGG + chr1_2:5463135-5463154 None:intergenic 15.0%
!!! AACACAATTACTTTAAAATA+AGG + chr1_2:5463136-5463155 None:intergenic 15.0%
!! TATAAATTATCAGTAAAAGA+TGG - chr1_2:5463270-5463289 Msa0051350:intron 15.0%
!!! ATAATTTGTATATTTCCTTT+TGG + chr1_2:5463483-5463502 None:intergenic 15.0%
!! AATTATTCTTCATAATTTGA+AGG - chr1_2:5463497-5463516 Msa0051350:intron 15.0%
!! ATTATTCTTCATAATTTGAA+GGG - chr1_2:5452781-5452800 Msa0051350:intron 15.0%
!!! CACTTAAATATTTTCAGTTT+TGG - chr1_2:5446448-5446467 Msa0051350:three_prime_UTR 20.0%
!! CTGTTAATGTTATTCAATAA+TGG - chr1_2:5446864-5446883 Msa0051350:intron 20.0%
!!! ATCATCACATATTGATTTTA+AGG + chr1_2:5447292-5447311 None:intergenic 20.0%
!!! ATGATTTTGTCTAAAACAAA+AGG - chr1_2:5447307-5447326 Msa0051350:intron 20.0%
!! GAAATCTATAAATTTATTGC+AGG - chr1_2:5448057-5448076 Msa0051350:intron 20.0%
!!! AAATTGTCTGAAAATGTTTT+GGG + chr1_2:5448088-5448107 None:intergenic 20.0%
!!! TAAATTGTCTGAAAATGTTT+TGG + chr1_2:5448089-5448108 None:intergenic 20.0%
!!! TTTGAAGTTTTAATCTTTCA+TGG - chr1_2:5448286-5448305 Msa0051350:intron 20.0%
!!! AACCTTTCTAAATTGTTATT+TGG - chr1_2:5448622-5448641 Msa0051350:intron 20.0%
!!! ACCTTTCTAAATTGTTATTT+GGG - chr1_2:5448623-5448642 Msa0051350:intron 20.0%
!!! TTTTACAATTCCTTTAACTA+AGG - chr1_2:5448723-5448742 Msa0051350:intron 20.0%
!! TTTACAATTCCTTTAACTAA+GGG - chr1_2:5448724-5448743 Msa0051350:intron 20.0%
!! AGTTAAAGGAATTGTAAAAA+GGG + chr1_2:5448722-5448741 None:intergenic 20.0%
!!! TTTTTATCCTTTCTGAATAA+TGG - chr1_2:5449111-5449130 Msa0051350:intron 20.0%
!!! AGTAATTATGTTTAGCTTTT+AGG - chr1_2:5449328-5449347 Msa0051350:intron 20.0%
!!! GAAATTTATACTTTTATTGC+AGG - chr1_2:5449416-5449435 Msa0051350:intron 20.0%
!!! AAATTGTCTGAAAATGTTTT+AGG + chr1_2:5448088-5448107 None:intergenic 20.0%
!!! TTTGATGTTTTAATCTTTGA+TGG - chr1_2:5449645-5449664 Msa0051350:intron 20.0%
!!! TTGTTTTCCTGTTTTTATAT+TGG - chr1_2:5450441-5450460 Msa0051350:intron 20.0%
!!! AATCATGAGTTTTAAACAAA+AGG + chr1_2:5451823-5451842 None:intergenic 20.0%
!! TTTAACAAAATATGGAAAAG+AGG + chr1_2:5451981-5452000 None:intergenic 20.0%
!! GAGATAAAAACAACATTATT+TGG + chr1_2:5452079-5452098 None:intergenic 20.0%
!!! ATTTATACTTTTATGTATGG+AGG - chr1_2:5452188-5452207 Msa0051350:intron 20.0%
!! ATTGTGATAACAATAACAAT+TGG + chr1_2:5452529-5452548 None:intergenic 20.0%
!! CGTTCAATAAAAACATTTAA+GGG + chr1_2:5452558-5452577 None:intergenic 20.0%
!!! CCTTAAATGTTTTTATTGAA+CGG - chr1_2:5452556-5452575 Msa0051350:intron 20.0%
!! GATTATTCTTCATAATTTGA+AGG - chr1_2:5452780-5452799 Msa0051350:intron 20.0%
!! AATAAAAATTACCATCTACT+GGG + chr1_2:5453271-5453290 None:intergenic 20.0%
!!! TCTTTGTTTACAGTTAAAAT+GGG + chr1_2:5453492-5453511 None:intergenic 20.0%
!!! TTTTCACAAAATAAGGAAAT+GGG + chr1_2:5453627-5453646 None:intergenic 20.0%
!!! ATTTTCACAAAATAAGGAAA+TGG + chr1_2:5453628-5453647 None:intergenic 20.0%
!!! TTCATGATTTTCACAAAATA+AGG + chr1_2:5453634-5453653 None:intergenic 20.0%
!! AGGTTTCTACAAAAATATTA+CGG - chr1_2:5454601-5454620 Msa0051350:intron 20.0%
!! AATATATGGTTGTTTGATAA+TGG - chr1_2:5454713-5454732 Msa0051350:intron 20.0%
!! TTTCAATCAGATAAACTATA+TGG + chr1_2:5455146-5455165 None:intergenic 20.0%
!! TTTATCAATTTCAACTGAAA+AGG + chr1_2:5455263-5455282 None:intergenic 20.0%
!!! TTTTTTTGAGGAAAACAATT+TGG - chr1_2:5455569-5455588 Msa0051350:intron 20.0%
!!! TTTTTTGAGGAAAACAATTT+GGG - chr1_2:5455570-5455589 Msa0051350:intron 20.0%
!!! TGATTTTCTTAATTTTCAGT+GGG + chr1_2:5455632-5455651 None:intergenic 20.0%
!!! ATGATTTTCTTAATTTTCAG+TGG + chr1_2:5455633-5455652 None:intergenic 20.0%
!! AAAAAAAAACATTGTGTTTG+AGG + chr1_2:5455682-5455701 None:intergenic 20.0%
!! TAAAAACTCATGAATAAATG+AGG - chr1_2:5455724-5455743 Msa0051350:intron 20.0%
!! AAAAACTCATGAATAAATGA+GGG - chr1_2:5455725-5455744 Msa0051350:intron 20.0%
!!! GACAAAATCAATTTTATTCT+CGG + chr1_2:5455981-5456000 None:intergenic 20.0%
!!! ATTGAAAAAGGTTGAATTTT+TGG + chr1_2:5456279-5456298 None:intergenic 20.0%
!! AAAAGGATAGAGAATTTAAA+AGG + chr1_2:5456326-5456345 None:intergenic 20.0%
!!! GATTATTGGTTATATAGTTT+AGG - chr1_2:5456386-5456405 Msa0051350:three_prime_UTR 20.0%
!! TATTCAATGTATCTAAAAAG+TGG + chr1_2:5456509-5456528 None:intergenic 20.0%
!!! AATGTATCTAGTCTTTATTA+TGG + chr1_2:5456486-5456505 None:intergenic 20.0%
!! TATTCAATGTATCTAAAAAG+TGG - chr1_2:5456509-5456528 Msa0051350:CDS 20.0%
!! GATAAAAAAATTCAAAAAGG+TGG + chr1_2:5456769-5456788 None:intergenic 20.0%
!! AAAATTAGAAACTTCAACAT+GGG + chr1_2:5456864-5456883 None:intergenic 20.0%
!!! GTTTCTAATTTTGATTTTTG+TGG - chr1_2:5456872-5456891 Msa0051350:CDS 20.0%
!! GAAAGTTATAAATTTATTGC+AGG - chr1_2:5457107-5457126 Msa0051350:intron 20.0%
!!! TTTGAGGTTTTAATCTTTAA+TGG - chr1_2:5457336-5457355 Msa0051350:CDS 20.0%
!! TTCATATGGTAAAAGTTAAT+GGG + chr1_2:5457738-5457757 None:intergenic 20.0%
!! ATTCATATGGTAAAAGTTAA+TGG + chr1_2:5457739-5457758 None:intergenic 20.0%
!!! GATTTTTGTTTTTACTGATA+GGG - chr1_2:5458069-5458088 Msa0051350:intron 20.0%
!!! AATCATGAGTTTTAAGAAAA+AGG + chr1_2:5458518-5458537 None:intergenic 20.0%
!! GAGATATAACAACATTATTT+GGG + chr1_2:5458720-5458739 None:intergenic 20.0%
!! AGAGATATAACAACATTATT+TGG + chr1_2:5458721-5458740 None:intergenic 20.0%
!! AAATGAAACAAAACACAAAA+GGG + chr1_2:5458747-5458766 None:intergenic 20.0%
!! ATTAAATTACCAGTAAAAGA+TGG - chr1_2:5458877-5458896 Msa0051350:intron 20.0%
!! ACTATGATAACAAAAACAAT+TGG + chr1_2:5459115-5459134 None:intergenic 20.0%
!! ATATGACAAAAACTTCAAAT+GGG + chr1_2:5459204-5459223 None:intergenic 20.0%
!! AATATGACAAAAACTTCAAA+TGG + chr1_2:5459205-5459224 None:intergenic 20.0%
!! GATTATTCTTCATAATATGA+AGG - chr1_2:5459362-5459381 Msa0051350:intron 20.0%
!! TAATTAATACATTCTGTGTA+TGG + chr1_2:5459738-5459757 None:intergenic 20.0%
!! TTGCTTAATTGTTTATTTGA+AGG - chr1_2:5460145-5460164 Msa0051350:intron 20.0%
!! TTTGAGGAAAAATGAAAAAT+TGG + chr1_2:5460747-5460766 None:intergenic 20.0%
!!! AAATTGGTTTACTTTTTTAG+GGG - chr1_2:5460893-5460912 Msa0051350:CDS 20.0%
!! GTTTGACAAAAAAAAGAAAA+TGG - chr1_2:5461166-5461185 Msa0051350:intron 20.0%
!!! TTTTTGTTTCATTTAGAAGA+TGG + chr1_2:5461529-5461548 None:intergenic 20.0%
!!! GAAATTTATATTTTAACTGC+AGG - chr1_2:5461782-5461801 Msa0051350:intron 20.0%
!!! AAATTGTCTGAAAATGTTTT+AGG + chr1_2:5448088-5448107 None:intergenic 20.0%
!!! TTTGAGGTTTTAATCTTTAA+TGG - chr1_2:5457336-5457355 Msa0051350:CDS 20.0%
!! AATAATCAAAACTGATCATA+GGG + chr1_2:5462781-5462800 None:intergenic 20.0%
!! AAATAATCAAAACTGATCAT+AGG + chr1_2:5462782-5462801 None:intergenic 20.0%
!!! TTTTTTTTTCCTTGTCAAAT+TGG - chr1_2:5462841-5462860 Msa0051350:intron 20.0%
!! ATTAACAAAATATGGAAAAG+AGG + chr1_2:5463011-5463030 None:intergenic 20.0%
!! ATAATAAAAAAGTTCAGTGT+CGG - chr1_2:5463031-5463050 Msa0051350:intron 20.0%
!! GTAAATTAAGAATCACAAAA+GGG + chr1_2:5463083-5463102 None:intergenic 20.0%
!! AGATAAAACAACATTATTTG+GGG + chr1_2:5463107-5463126 None:intergenic 20.0%
!! GAGATAAAACAACATTATTT+GGG + chr1_2:5463108-5463127 None:intergenic 20.0%
!! AGAGATAAAACAACATTATT+TGG + chr1_2:5463109-5463128 None:intergenic 20.0%
!!! AGCATTCATCTTTTTATATA+TGG - chr1_2:5463213-5463232 Msa0051350:intron 20.0%
!!! ATTCATCTTTTTATATATGG+AGG - chr1_2:5463216-5463235 Msa0051350:intron 20.0%
!! AGAAAACTTTACATAACAAT+GGG + chr1_2:5463356-5463375 None:intergenic 20.0%
!! AAGAAAACTTTACATAACAA+TGG + chr1_2:5463357-5463376 None:intergenic 20.0%
! GAAATGAATGAACTGAAAAT+GGG + chr1_2:5446664-5446683 None:intergenic 25.0%
! TGAAATGAATGAACTGAAAA+TGG + chr1_2:5446665-5446684 None:intergenic 25.0%
!!! AGTTTTGAGCTTTTGATTTA+TGG - chr1_2:5446836-5446855 Msa0051350:intron 25.0%
!!! GTTTTGAGCTTTTGATTTAT+GGG - chr1_2:5446837-5446856 Msa0051350:intron 25.0%
! TGTGAGAATTTATATAGGAT+TGG - chr1_2:5446985-5447004 Msa0051350:intron 25.0%
! AGAGGAAATTAGAGAAATTA+GGG - chr1_2:5447447-5447466 Msa0051350:intron 25.0%
! AAAAGAAAAGGAAGTGAAAA+AGG - chr1_2:5447850-5447869 Msa0051350:intron 25.0%
!!! ATTGAGTTGAAGAATAATGT+TGG + chr1_2:5448019-5448038 None:intergenic 25.0%
!!! TCTTATTTTGTTGGAAAATG+TGG - chr1_2:5448334-5448353 Msa0051350:intron 25.0%
!! AGTTGTTGCTTAAAATCTTT+GGG + chr1_2:5448529-5448548 None:intergenic 25.0%
!! AAGTTGTTGCTTAAAATCTT+TGG + chr1_2:5448530-5448549 None:intergenic 25.0%
! TCAATCATTTACAACATGAA+AGG + chr1_2:5448588-5448607 None:intergenic 25.0%
! ACCCAAATAACAATTTAGAA+AGG + chr1_2:5448627-5448646 None:intergenic 25.0%
! TTACAATTCCTTTAACTAAG+GGG - chr1_2:5448725-5448744 Msa0051350:intron 25.0%
! CAGTTAAAGGAATTGTAAAA+AGG + chr1_2:5448922-5448941 None:intergenic 25.0%
! TATTATTTAATACGCTGCTA+AGG - chr1_2:5448989-5449008 Msa0051350:intron 25.0%
!!! GATTTTAGTGTAGTTTTTCT+TGG - chr1_2:5449223-5449242 Msa0051350:intron 25.0%
! CATGTTATCAAGATGATTAA+TGG - chr1_2:5449291-5449310 Msa0051350:intron 25.0%
! TTCCTTGTCTTTAATTACAA+TGG - chr1_2:5449612-5449631 Msa0051350:intron 25.0%
!!! AAAGAAGCTTCTTATTTTGT+CGG - chr1_2:5449684-5449703 Msa0051350:intron 25.0%
! TGGTTTATATGAGAAATTTC+AGG - chr1_2:5449809-5449828 Msa0051350:intron 25.0%
! TTTCAGGATCTTAACAATAT+AGG - chr1_2:5449825-5449844 Msa0051350:intron 25.0%
!! AGCATTAAAAGTCTTTTCAT+TGG + chr1_2:5449880-5449899 None:intergenic 25.0%
!! AATGAAAAGACTTTTAATGC+TGG - chr1_2:5449879-5449898 Msa0051350:intron 25.0%
! CTTATGACCAATATAAAAAC+AGG + chr1_2:5450451-5450470 None:intergenic 25.0%
!! TTTTATATTGGTCATAAGCA+TGG - chr1_2:5450453-5450472 Msa0051350:intron 25.0%
! ATCAAATGACAAAAGAAAAG+TGG + chr1_2:5450661-5450680 None:intergenic 25.0%
! ATTATAAAAGAGAGAATGAG+AGG - chr1_2:5450867-5450886 Msa0051350:intron 25.0%
! TATATTTCAACGTTGTGAAT+AGG - chr1_2:5451564-5451583 Msa0051350:intron 25.0%
! ATATTTCAACGTTGTGAATA+GGG - chr1_2:5451565-5451584 Msa0051350:intron 25.0%
!!! TAATGGGCTTGATTAATTAA+GGG - chr1_2:5451626-5451645 Msa0051350:intron 25.0%
! GTAAATTGAGAATCACAAAA+GGG + chr1_2:5452053-5452072 None:intergenic 25.0%
! TAAAAACAACATTATTTGGG+AGG + chr1_2:5452075-5452094 None:intergenic 25.0%
!! ATTATGGATGGAATTTTCAT+TGG + chr1_2:5452271-5452290 None:intergenic 25.0%
! CATTAATTAGGATGGAATTA+TGG + chr1_2:5452287-5452306 None:intergenic 25.0%
! CAATAAAAACATTTAAGGGA+AGG + chr1_2:5452554-5452573 None:intergenic 25.0%
! CCGTTCAATAAAAACATTTA+AGG + chr1_2:5452559-5452578 None:intergenic 25.0%
!!! TTCCTAATACCGATTTATAA+TGG - chr1_2:5452696-5452715 Msa0051350:intron 25.0%
!! TATTCCATATGAATTTTCGA+AGG - chr1_2:5452732-5452751 Msa0051350:intron 25.0%
! ATAATCTTTATCTTGCAGTT+TGG + chr1_2:5452766-5452785 None:intergenic 25.0%
! CAATAAAAATTACCATCTAC+TGG + chr1_2:5453272-5453291 None:intergenic 25.0%
! GTATTCAACATTTATCCTTT+GGG + chr1_2:5453428-5453447 None:intergenic 25.0%
! AGTATTCAACATTTATCCTT+TGG + chr1_2:5453429-5453448 None:intergenic 25.0%
!!! TGGAAGGTAGAAATTTTTTA+AGG + chr1_2:5453454-5453473 None:intergenic 25.0%
!! GTCTTTGTTTACAGTTAAAA+TGG + chr1_2:5453493-5453512 None:intergenic 25.0%
! TTTCACAAAATAAGGAAATG+GGG + chr1_2:5453626-5453645 None:intergenic 25.0%
! TCCAAATTAACAATCGTTTA+AGG - chr1_2:5454581-5454600 Msa0051350:intron 25.0%
! ACCTTAAACGATTGTTAATT+TGG + chr1_2:5454585-5454604 None:intergenic 25.0%
! ACAAACAGATGTTACAAATT+TGG + chr1_2:5454967-5454986 None:intergenic 25.0%
! TGTTAAAGAATGATGCTATA+AGG - chr1_2:5454984-5455003 Msa0051350:intron 25.0%
! AGTTTATCTGATTGAAACAT+CGG - chr1_2:5455149-5455168 Msa0051350:intron 25.0%
!! GTATTTTCGTCTAATGAAAT+AGG + chr1_2:5455230-5455249 None:intergenic 25.0%
! GTCATTACCTACTAAATATT+AGG - chr1_2:5455328-5455347 Msa0051350:intron 25.0%
!!! GGCGTTTTTTTTTTTTTTTG+AGG - chr1_2:5455557-5455576 Msa0051350:intron 25.0%
! AAAACTCATGAATAAATGAG+GGG - chr1_2:5455726-5455745 Msa0051350:intron 25.0%
! AAAAAGACATCTAATTTGAG+AGG + chr1_2:5455868-5455887 None:intergenic 25.0%
! CAAATAAAATGCAGTTACAA+AGG - chr1_2:5456000-5456019 Msa0051350:intron 25.0%
! TTGTCAAAACAAAAAGTGAT+GGG - chr1_2:5456109-5456128 Msa0051350:intron 25.0%
! AACACAAAATAGCAAATCAT+GGG - chr1_2:5456141-5456160 Msa0051350:intron 25.0%
!! TACAAGTTGTTGTTGAAAAT+CGG + chr1_2:5456227-5456246 None:intergenic 25.0%
!!! AATGTTGAGCTTTTGATTAT+TGG - chr1_2:5456372-5456391 Msa0051350:three_prime_UTR 25.0%
!! ATTTTGCTTATAATAGTGAC+CGG + chr1_2:5456533-5456552 None:intergenic 25.0%
!! ATTTTGCTTATAATAGTGAC+CGG - chr1_2:5456533-5456552 Msa0051350:CDS 25.0%
!!! CTATCACTTTTTCATCAATT+TGG + chr1_2:5456722-5456741 None:intergenic 25.0%
! TGATGAAAAAGTGATAGTAT+AGG - chr1_2:5456725-5456744 Msa0051350:CDS 25.0%
! CAAAATTAGAAACTTCAACA+TGG + chr1_2:5456865-5456884 None:intergenic 25.0%
!!! TCTTATTTTGTTCTAGAATG+TGG - chr1_2:5457384-5457403 Msa0051350:CDS 25.0%
!!! CTAACTTTTGAAACTACTAA+TGG - chr1_2:5457552-5457571 Msa0051350:CDS 25.0%
!! AATGGAAATACTTTTAATGC+TGG - chr1_2:5457570-5457589 Msa0051350:CDS 25.0%
! TAGATGAGTTAGAATTCATA+TGG + chr1_2:5457752-5457771 None:intergenic 25.0%
!! CATCTAGTAACTATAACTTT+TGG - chr1_2:5457766-5457785 Msa0051350:CDS 25.0%
!! ATCTTGATTTTGTACTAAAC+TGG - chr1_2:5457937-5457956 Msa0051350:intron 25.0%
! AAATCTAGTGTGTATCTATA+TGG - chr1_2:5457975-5457994 Msa0051350:intron 25.0%
!! AAAATTCATGATAGTGAATC+AGG + chr1_2:5458021-5458040 None:intergenic 25.0%
!!! CGATTTTTGTTTTTACTGAT+AGG - chr1_2:5458068-5458087 Msa0051350:intron 25.0%
!!! TGAGTTTTAAGAAAAAGGAT+AGG + chr1_2:5458513-5458532 None:intergenic 25.0%
! TTTAACAAAATATGGAACAG+AGG + chr1_2:5458622-5458641 None:intergenic 25.0%
! ATAATCAAAACGTTTCATGT+CGG - chr1_2:5458642-5458661 Msa0051350:CDS 25.0%
! CAAATGAAACAAAACACAAA+AGG + chr1_2:5458748-5458767 None:intergenic 25.0%
!! TGCATTCATCTTTTTATGTA+TGG - chr1_2:5458813-5458832 Msa0051350:intron 25.0%
!! ATTCATCTTTTTATGTATGG+AGG - chr1_2:5458816-5458835 Msa0051350:intron 25.0%
!! TCGTTCAATACAAACTTTTA+AGG + chr1_2:5459145-5459164 None:intergenic 25.0%
! ATCTCCAATCTTAATGTTAT+TGG + chr1_2:5459475-5459494 None:intergenic 25.0%
!!! TTCTAAAACAACTTGAAGAA+AGG - chr1_2:5459811-5459830 Msa0051350:intron 25.0%
! TATTATTAATATACTCCCTC+CGG - chr1_2:5459985-5460004 Msa0051350:intron 25.0%
! CATTCTCATATAACTAATGA+AGG - chr1_2:5460062-5460081 Msa0051350:intron 25.0%
! ATAACTAATGAAGGAACAAA+TGG - chr1_2:5460071-5460090 Msa0051350:intron 25.0%
!!! TTGAGACTTTTTTGTGAAAA+AGG + chr1_2:5460419-5460438 None:intergenic 25.0%
! AACGGCCATTTAAAAAAAAT+TGG - chr1_2:5460877-5460896 Msa0051350:CDS 25.0%
! TTACCATATCAAATTTACGT+GGG - chr1_2:5461102-5461121 Msa0051350:intron 25.0%
!!! TCAAGCTTTTTTGTTTTAGT+AGG + chr1_2:5461344-5461363 None:intergenic 25.0%
! TGAACTATTTCATTCTCAAA+TGG - chr1_2:5461369-5461388 Msa0051350:intron 25.0%
! GAACTATTTCATTCTCAAAT+GGG - chr1_2:5461370-5461389 Msa0051350:intron 25.0%
!! AACAAGTTGTTGTTGAAAAT+GGG + chr1_2:5461476-5461495 None:intergenic 25.0%
!! TAACAAGTTGTTGTTGAAAA+TGG + chr1_2:5461477-5461496 None:intergenic 25.0%
! TCAATACTATAGTCAAAGAA+AGG + chr1_2:5461557-5461576 None:intergenic 25.0%
!! ATGTATCTTTTAATCTCAGA+TGG - chr1_2:5461760-5461779 Msa0051350:intron 25.0%
!!! TCTTATTTTGTTCTAGAATG+TGG - chr1_2:5457384-5457403 Msa0051350:CDS 25.0%
! TTTCTGTTTGTAGTTTCAAA+AGG + chr1_2:5462233-5462252 None:intergenic 25.0%
! TTGACAAGGAAAAAAAAAAG+TGG + chr1_2:5462839-5462858 None:intergenic 25.0%
! AATGATAAAACAAAAGCGAT+TGG + chr1_2:5462872-5462891 None:intergenic 25.0%
! GGTAAATTAAGAATCACAAA+AGG + chr1_2:5463084-5463103 None:intergenic 25.0%
! ATAAAACAACATTATTTGGG+GGG + chr1_2:5463105-5463124 None:intergenic 25.0%
! GATAAAACAACATTATTTGG+GGG + chr1_2:5463106-5463125 None:intergenic 25.0%
!!! CAATTACTTTAAAATAAGGG+CGG + chr1_2:5463132-5463151 None:intergenic 25.0%
!! TAAAAAGATGAATGCTGTTT+CGG + chr1_2:5463209-5463228 None:intergenic 25.0%
!! ATCTTTTTATATATGGAGGA+TGG - chr1_2:5463220-5463239 Msa0051350:intron 25.0%
! CTTATTTCATGTACATTTAG+TGG - chr1_2:5459933-5459952 Msa0051350:intron 25.0%
ATGTTATTCAATAATGGCTC+AGG - chr1_2:5446870-5446889 Msa0051350:intron 30.0%
TCCTATATAAATTCTCACAC+CGG + chr1_2:5446984-5447003 None:intergenic 30.0%
TTAAGTTCACCTCAAAATCA+TGG + chr1_2:5447029-5447048 None:intergenic 30.0%
CACAAAAGTTTGATTCTGTT+GGG + chr1_2:5447255-5447274 None:intergenic 30.0%
GAGAGGAAATTAGAGAAATT+AGG - chr1_2:5447446-5447465 Msa0051350:intron 30.0%
! ATTTCTCTTGGTGATCAATT+GGG - chr1_2:5447470-5447489 Msa0051350:intron 30.0%
AAAGAGAAAGGTAGGAATTA+GGG - chr1_2:5447529-5447548 Msa0051350:intron 30.0%
GCTCTTTATATTGTTGTCTT+TGG - chr1_2:5447706-5447725 Msa0051350:intron 30.0%
TTTGCTTGGACTATTTAGTT+TGG - chr1_2:5447750-5447769 Msa0051350:intron 30.0%
AACAGTGGAACAAATATCAA+TGG + chr1_2:5447779-5447798 None:intergenic 30.0%
!!! ATTTGTTCCACTGTTTTTGT+TGG - chr1_2:5447784-5447803 Msa0051350:intron 30.0%
GTTAAAACCAACAAAAACAG+TGG + chr1_2:5447794-5447813 None:intergenic 30.0%
GGGCAAAAAATGAAAAGAAA+AGG - chr1_2:5447838-5447857 Msa0051350:intron 30.0%
TAGATAATGTTTGCAGAACA+AGG + chr1_2:5447914-5447933 None:intergenic 30.0%
GATACCATTTACTTCACAAA+TGG - chr1_2:5448187-5448206 Msa0051350:intron 30.0%
TTCCTTGTCTTTAAGTACAA+TGG - chr1_2:5448253-5448272 Msa0051350:intron 30.0%
TCCTTGTCTTTAAGTACAAT+GGG - chr1_2:5448254-5448273 Msa0051350:intron 30.0%
GACTTCTTCAACAGAATTAT+TGG + chr1_2:5448401-5448420 None:intergenic 30.0%
GAAATGGATGAACTGAAAAT+GGG + chr1_2:5448494-5448513 None:intergenic 30.0%
TGAAATGGATGAACTGAAAA+TGG + chr1_2:5448495-5448514 None:intergenic 30.0%
! AAAATCTTTGGGAAGAAGTT+GGG + chr1_2:5448518-5448537 None:intergenic 30.0%
! TAAAATCTTTGGGAAGAAGT+TGG + chr1_2:5448519-5448538 None:intergenic 30.0%
TACAATTCCTTTAACTAAGG+GGG - chr1_2:5448726-5448745 Msa0051350:intron 30.0%
AGCCTCTTGTGTAAAAAATA+GGG - chr1_2:5448815-5448834 Msa0051350:intron 30.0%
!!! TACCCTATTTTTTACACAAG+AGG + chr1_2:5448820-5448839 None:intergenic 30.0%
AAAGAACTAAGTGCAGTTAA+AGG + chr1_2:5448935-5448954 None:intergenic 30.0%
AGCTTATCCATTATTCAGAA+AGG + chr1_2:5449121-5449140 None:intergenic 30.0%
TTGAATTTGCATTGCAATAG+AGG - chr1_2:5449154-5449173 Msa0051350:intron 30.0%
! ATAGATAATTTTGCAGAGCA+AGG + chr1_2:5449265-5449284 None:intergenic 30.0%
CACCATTGTAATTAAAGACA+AGG + chr1_2:5449617-5449636 None:intergenic 30.0%
!!! TCTTATTTTGTCGGAAAATG+CGG - chr1_2:5449693-5449712 Msa0051350:intron 30.0%
!! TTTTCATTGGTAGTTTCAAC+AGG + chr1_2:5449867-5449886 None:intergenic 30.0%
AACTTCATTAACAGACTTCT+TGG + chr1_2:5450199-5450218 None:intergenic 30.0%
AACAGGAAAACAAACTAGTT+TGG + chr1_2:5450434-5450453 None:intergenic 30.0%
ACTACGATAAATTCCAAACT+TGG - chr1_2:5450596-5450615 Msa0051350:intron 30.0%
AATGACAAAAGAAAAGTGGT+TGG + chr1_2:5450657-5450676 None:intergenic 30.0%
AAGGGAATAAGCCTAAAATA+TGG - chr1_2:5450825-5450844 Msa0051350:intron 30.0%
! ACCTAAACTCTCCATATTTT+AGG + chr1_2:5450839-5450858 None:intergenic 30.0%
AGAGAAAGTGAGAATTAGTA+GGG - chr1_2:5450898-5450917 Msa0051350:intron 30.0%
!! TTTGTAGAGCATTGCTATTT+GGG - chr1_2:5451008-5451027 Msa0051350:intron 30.0%
CAAGAAATTAAAGACAAACC+GGG + chr1_2:5451102-5451121 None:intergenic 30.0%
GCAAGAAATTAAAGACAAAC+CGG + chr1_2:5451103-5451122 None:intergenic 30.0%
! TGAAATCATTGGTAATCAAG+CGG - chr1_2:5451492-5451511 Msa0051350:intron 30.0%
!! CTAATGGGCTTGATTAATTA+AGG - chr1_2:5451625-5451644 Msa0051350:intron 30.0%
! CAAGCTTTGGCATAAATATA+AGG + chr1_2:5451799-5451818 None:intergenic 30.0%
TTAAACAAAAGGACAAGCTT+TGG + chr1_2:5451812-5451831 None:intergenic 30.0%
AAAAGAGGAGGTAAATGATT+GGG + chr1_2:5451966-5451985 None:intergenic 30.0%
AACAAAATATGGAAAAGAGG+AGG + chr1_2:5451978-5451997 None:intergenic 30.0%
GGTAAATTGAGAATCACAAA+AGG + chr1_2:5452054-5452073 None:intergenic 30.0%
CACAAGTTACTTAAAGATGA+GGG + chr1_2:5452106-5452125 None:intergenic 30.0%
ACACAAGTTACTTAAAGATG+AGG + chr1_2:5452107-5452126 None:intergenic 30.0%
! TCATCTTTAAGTAACTTGTG+TGG - chr1_2:5452106-5452125 Msa0051350:intron 30.0%
! ATACTTTTATGTATGGAGGA+TGG - chr1_2:5452192-5452211 Msa0051350:intron 30.0%
AATTAGGATGGAATTATGGA+TGG + chr1_2:5452283-5452302 None:intergenic 30.0%
! GATTGACTCATTAATTAGGA+TGG + chr1_2:5452295-5452314 None:intergenic 30.0%
! CCAAGATTGACTCATTAATT+AGG + chr1_2:5452299-5452318 None:intergenic 30.0%
CCTAATTAATGAGTCAATCT+TGG - chr1_2:5452296-5452315 Msa0051350:intron 30.0%
ATTTCAATACCTAGTGAAGA+TGG - chr1_2:5452368-5452387 Msa0051350:intron 30.0%
CAATAACAATTGGTACTTCT+TGG + chr1_2:5452519-5452538 None:intergenic 30.0%
GTCCATTATAAATCGGTATT+AGG + chr1_2:5452701-5452720 None:intergenic 30.0%
GCATTGTGTCCATTATAAAT+CGG + chr1_2:5452708-5452727 None:intergenic 30.0%
TGATCCTTCGAAAATTCATA+TGG + chr1_2:5452739-5452758 None:intergenic 30.0%
! GTCTGTATTTTCGAACTTAT+AGG - chr1_2:5452913-5452932 Msa0051350:intron 30.0%
!! GAGCTGATTTTATGTTTCTT+CGG + chr1_2:5453069-5453088 None:intergenic 30.0%
! TTTCAAACTATCATTAGCCT+GGG + chr1_2:5453557-5453576 None:intergenic 30.0%
! TTTTCAAACTATCATTAGCC+TGG + chr1_2:5453558-5453577 None:intergenic 30.0%
!! ACAACTATTCACACTTTTTG+TGG - chr1_2:5453894-5453913 Msa0051350:intron 30.0%
!! CGTGATAATGACATCAATTT+TGG - chr1_2:5453936-5453955 Msa0051350:intron 30.0%
AAGGTCTTGATCATCAAAAT+GGG - chr1_2:5454027-5454046 Msa0051350:intron 30.0%
CAATGAAGATGTATATGTTG+TGG - chr1_2:5454125-5454144 Msa0051350:intron 30.0%
! TTGATGCATTTTATGCATGT+CGG - chr1_2:5454165-5454184 Msa0051350:intron 30.0%
! TTTTCCATAACCTTAAACGA+CGG + chr1_2:5454345-5454364 None:intergenic 30.0%
ACCAAATTCGTAATACAAGT+TGG - chr1_2:5454822-5454841 Msa0051350:intron 30.0%
TCCAACTTGTATTACGAATT+TGG + chr1_2:5454826-5454845 None:intergenic 30.0%
TAGCATCATAAGGAAATGTA+GGG + chr1_2:5454944-5454963 None:intergenic 30.0%
! ACAAATTTGGTAGCATCATA+AGG + chr1_2:5454954-5454973 None:intergenic 30.0%
! TTATCTAGACATTTTCTCGA+TGG + chr1_2:5455088-5455107 None:intergenic 30.0%
TCAGATAAACTATATGGATG+CGG + chr1_2:5455140-5455159 None:intergenic 30.0%
CAACTGAAAAGGATACTAAA+AGG + chr1_2:5455252-5455271 None:intergenic 30.0%
AAAGCAATGGTTGAAATACA+AGG - chr1_2:5455380-5455399 Msa0051350:intron 30.0%
AAGCAATGGTTGAAATACAA+GGG - chr1_2:5455381-5455400 Msa0051350:intron 30.0%
! TGCTATTTGGATCTAGTAAA+AGG - chr1_2:5455502-5455521 Msa0051350:intron 30.0%
AGCAACGTTCAAAAACAATT+TGG - chr1_2:5455535-5455554 Msa0051350:intron 30.0%
GCAACGTTCAAAAACAATTT+GGG - chr1_2:5455536-5455555 Msa0051350:intron 30.0%
CTTGTCAAAACAAAAAGTGA+TGG - chr1_2:5456108-5456127 Msa0051350:intron 30.0%
GAACACAAAATAGCAAATCA+TGG - chr1_2:5456140-5456159 Msa0051350:intron 30.0%
GAAATGGATGAACTGAAAAT+GGG + chr1_2:5448494-5448513 None:intergenic 30.0%
TGAAATGGATGAACTGAAAA+TGG + chr1_2:5448495-5448514 None:intergenic 30.0%
GGATAGAGAATTTAAAAGGT+GGG + chr1_2:5456322-5456341 None:intergenic 30.0%
AGGATAGAGAATTTAAAAGG+TGG + chr1_2:5456323-5456342 None:intergenic 30.0%
GCAGTTAAAGGAAATGTAAA+AGG + chr1_2:5456343-5456362 None:intergenic 30.0%
! ATTTTCTTCAGTGCAGTTAA+AGG + chr1_2:5456355-5456374 None:intergenic 30.0%
! CACTCAATTTTGTTAACTGA+GGG - chr1_2:5456630-5456649 Msa0051350:CDS 30.0%
TTGGATAGGAGAATAGTTTA+GGG - chr1_2:5456666-5456685 Msa0051350:CDS 30.0%
!!! TGAACAAAGTTTTGAGCTTT+TGG - chr1_2:5456829-5456848 Msa0051350:intron 30.0%
!!! AAGTTTTGAGCTTTTGGTTA+TGG - chr1_2:5456835-5456854 Msa0051350:intron 30.0%
CAATGTTTCTTACTCTTAAC+TGG - chr1_2:5457085-5457104 Msa0051350:intron 30.0%
! AAATTGTCCGAGAATGTTTT+AGG + chr1_2:5457138-5457157 None:intergenic 30.0%
TTCCTTGTCTTTAAGTACAA+TGG - chr1_2:5448253-5448272 Msa0051350:intron 30.0%
GTTTCAAAAGTTAGAGCTAA+AGG + chr1_2:5457546-5457565 None:intergenic 30.0%
ACCAAAAGAAGCTAATTCTT+GGG - chr1_2:5457665-5457684 Msa0051350:CDS 30.0%
! ACTATAACTTTTGGATGTCA+TGG - chr1_2:5457775-5457794 Msa0051350:CDS 30.0%
!!! ACTAGATTTTCGTATCGATT+GGG + chr1_2:5457964-5457983 None:intergenic 30.0%
TAAGAAAAGAGAGAATGATG+AGG - chr1_2:5458170-5458189 Msa0051350:intron 30.0%
GTTAGAATTAGTTGGTTAGT+TGG - chr1_2:5458208-5458227 Msa0051350:intron 30.0%
!! GGATGAATCATTGTTTTGTT+TGG - chr1_2:5458279-5458298 Msa0051350:intron 30.0%
! ATTGTTTGATTTCTGTGTAG+AGG - chr1_2:5458309-5458328 Msa0051350:intron 30.0%
CCAGAAGTAAGAAATTAAAG+AGG + chr1_2:5458402-5458421 None:intergenic 30.0%
! CCTCTTTAATTTCTTACTTC+TGG - chr1_2:5458399-5458418 Msa0051350:intron 30.0%
AAAGTTATCAAGAAGTGATG+AGG - chr1_2:5458572-5458591 Msa0051350:CDS 30.0%
! ATCTTTTTATGTATGGAGGA+TGG - chr1_2:5458820-5458839 Msa0051350:intron 30.0%
AGAATAGTTCAAATCTACCA+AGG + chr1_2:5452316-5452335 None:intergenic 30.0%
ATTGGTACTTCTTGAAGAAA+TGG + chr1_2:5459097-5459116 None:intergenic 30.0%
CTTCAAATGGGAAATATTTG+AGG + chr1_2:5459192-5459211 None:intergenic 30.0%
TCTATGGCACATCTTAAAAA+AGG - chr1_2:5459330-5459349 Msa0051350:intron 30.0%
ATAATATGAAGGGAGAATGT+TGG - chr1_2:5459373-5459392 Msa0051350:intron 30.0%
CATGCCAATAACATTAAGAT+TGG - chr1_2:5459468-5459487 Msa0051350:intron 30.0%
! GTTTCATATGCTCATTTTGA+TGG + chr1_2:5459599-5459618 None:intergenic 30.0%
! AGACAGATGAATCAATTTTG+TGG - chr1_2:5459677-5459696 Msa0051350:intron 30.0%
TGATATGAACTACAAAGCAA+TGG + chr1_2:5459776-5459795 None:intergenic 30.0%
!! CTTCTAAAACAACTTGAAGA+CGG - chr1_2:5459810-5459829 Msa0051350:intron 30.0%
ATTAGAGTCACTTGCATAAT+CGG - chr1_2:5459881-5459900 Msa0051350:intron 30.0%
! CATTTTGTTACGACTTTCTT+TGG + chr1_2:5460515-5460534 None:intergenic 30.0%
!! TCTTTGAGACTGTTGAAAAA+TGG + chr1_2:5460642-5460661 None:intergenic 30.0%
!! ATTTTTCAACAGTCTCAAAG+AGG - chr1_2:5460641-5460660 Msa0051350:CDS 30.0%
! AACTTGACCATATTTCTGAT+TGG - chr1_2:5460937-5460956 Msa0051350:CDS 30.0%
! ACCATATTTCTGATTGGTTA+AGG - chr1_2:5460943-5460962 Msa0051350:CDS 30.0%
ACCTTAACCAATCAGAAATA+TGG + chr1_2:5460947-5460966 None:intergenic 30.0%
! TATTTCTGATTGGTTAAGGT+TGG - chr1_2:5460947-5460966 Msa0051350:CDS 30.0%
! ATTTCTGATTGGTTAAGGTT+GGG - chr1_2:5460948-5460967 Msa0051350:CDS 30.0%
CTTACCATATCAAATTTACG+TGG - chr1_2:5461101-5461120 Msa0051350:intron 30.0%
AAACCCACGTAAATTTGATA+TGG + chr1_2:5461108-5461127 None:intergenic 30.0%
GAAAATGGGTGTTAAACAAA+TGG - chr1_2:5461181-5461200 Msa0051350:intron 30.0%
TGAAATGGATGAACTGAAAA+TGG + chr1_2:5448495-5448514 None:intergenic 30.0%
TGTTTCATTTAGAAGATGGA+AGG + chr1_2:5461525-5461544 None:intergenic 30.0%
TGATTTCAGCAATGATTTAC+AGG + chr1_2:5461705-5461724 None:intergenic 30.0%
AGATGATACTGTTTACTTCA+CGG - chr1_2:5461908-5461927 Msa0051350:intron 30.0%
TTCCTTGTCTTTAAGTACAA+TGG - chr1_2:5448253-5448272 Msa0051350:intron 30.0%
GTTTGTAGTTTCAAAAGGTA+CGG + chr1_2:5462228-5462247 None:intergenic 30.0%
! AACAGAAAGACTTTTAATGC+TGG - chr1_2:5462245-5462264 Msa0051350:CDS 30.0%
TTAGGACCATTATAAAAAGG+GGG + chr1_2:5462632-5462651 None:intergenic 30.0%
CTTAGGACCATTATAAAAAG+GGG + chr1_2:5462633-5462652 None:intergenic 30.0%
GCTTAGGACCATTATAAAAA+GGG + chr1_2:5462634-5462653 None:intergenic 30.0%
TTATCAGTATCAAATGACAC+AGG - chr1_2:5462659-5462678 Msa0051350:intron 30.0%
ATCTGGATTTGATACTAAAC+TGG - chr1_2:5462690-5462709 Msa0051350:intron 30.0%
ACATGTAGTGTGTATCAATA+TGG - chr1_2:5462728-5462747 Msa0051350:intron 30.0%
TGGTTGATTACTCTAAGTAT+AGG + chr1_2:5462819-5462838 None:intergenic 30.0%
TTGGTTATACCAATTTGACA+AGG + chr1_2:5462853-5462872 None:intergenic 30.0%
AACAAAATATGGAAAAGAGG+AGG + chr1_2:5451978-5451997 None:intergenic 30.0%
TGCAATATCTGTATCACTAT+GGG + chr1_2:5463322-5463341 None:intergenic 30.0%
TTGCAATATCTGTATCACTA+TGG + chr1_2:5463323-5463342 None:intergenic 30.0%
! GTTTCATATGCTCATTTTGA+TGG + chr1_2:5459599-5459618 None:intergenic 30.0%
TGATATGAACTAAAAAGCAG+TGG + chr1_2:5463945-5463964 None:intergenic 30.0%
ATGAAAGTGACTCTAATAGT+TGG + chr1_2:5464010-5464029 None:intergenic 30.0%
!! CACAAGTTGGTGTTGAAAAT+CGG + chr1_2:5446709-5446728 None:intergenic 35.0%
CCTATATAAATTCTCACACC+GGG + chr1_2:5446983-5447002 None:intergenic 35.0%
GATTCTACTGCAATGTGATA+CGG + chr1_2:5447059-5447078 None:intergenic 35.0%
ACATTGCAGTAGAATCTGTT+GGG - chr1_2:5447063-5447082 Msa0051350:intron 35.0%
! TAGAATCTGTTGGGGATTTT+GGG - chr1_2:5447072-5447091 Msa0051350:intron 35.0%
AAATATTCCATGACCATGAG+AGG - chr1_2:5447119-5447138 Msa0051350:intron 35.0%
CCACAAAAGTTTGATTCTGT+TGG + chr1_2:5447256-5447275 None:intergenic 35.0%
! CCAACAGAATCAAACTTTTG+TGG - chr1_2:5447253-5447272 Msa0051350:intron 35.0%
! TTGTCTAAAACAAAAGGCAC+AGG - chr1_2:5447313-5447332 Msa0051350:intron 35.0%
! TGTCTAAAACAAAAGGCACA+GGG - chr1_2:5447314-5447333 Msa0051350:intron 35.0%
TCTTGAGTGATTATGAAGTG+AGG - chr1_2:5447417-5447436 Msa0051350:intron 35.0%
CTTGAGTGATTATGAAGTGA+GGG - chr1_2:5447418-5447437 Msa0051350:intron 35.0%
TTGAGTGATTATGAAGTGAG+GGG - chr1_2:5447419-5447438 Msa0051350:intron 35.0%
GAGAAATTAGGGATTTCTCT+TGG - chr1_2:5447458-5447477 Msa0051350:intron 35.0%
! GATTTCTCTTGGTGATCAAT+TGG - chr1_2:5447469-5447488 Msa0051350:intron 35.0%
! TTTCTCTTGGTGATCAATTG+GGG - chr1_2:5447471-5447490 Msa0051350:intron 35.0%
GATCAATTGGGGATATTTCT+TGG - chr1_2:5447482-5447501 Msa0051350:intron 35.0%
GAAAGAGAAAGGTAGGAATT+AGG - chr1_2:5447528-5447547 Msa0051350:intron 35.0%
CCAAGATTGTTTACACAGTT+AGG + chr1_2:5447671-5447690 None:intergenic 35.0%
CCTAACTGTGTAAACAATCT+TGG - chr1_2:5447668-5447687 Msa0051350:intron 35.0%
GTGTTGAATCGTTATTTGCT+TGG - chr1_2:5447736-5447755 Msa0051350:intron 35.0%
!!! TTGTTGGTTTTAACAACGAG+TGG - chr1_2:5447800-5447819 Msa0051350:intron 35.0%
AGTGGTTTGAATTCACAACA+GGG - chr1_2:5447818-5447837 Msa0051350:intron 35.0%
CATGTACTTGAGATGATTAC+TGG - chr1_2:5447940-5447959 Msa0051350:intron 35.0%
CAATGTTTCTTAGTCTCAAC+TGG - chr1_2:5448035-5448054 Msa0051350:intron 35.0%
!!! GTCTGAAAATGTTTTGGGAA+GGG + chr1_2:5448083-5448102 None:intergenic 35.0%
!!! TGTCTGAAAATGTTTTGGGA+AGG + chr1_2:5448084-5448103 None:intergenic 35.0%
CCATCCATTTGTGAAGTAAA+TGG + chr1_2:5448194-5448213 None:intergenic 35.0%
CCATTTACTTCACAAATGGA+TGG - chr1_2:5448191-5448210 Msa0051350:intron 35.0%
CCTTGTCTTTAAGTACAATG+GGG - chr1_2:5448255-5448274 Msa0051350:intron 35.0%
!!! AAGGCAGCTTCTTATTTTGT+TGG - chr1_2:5448325-5448344 Msa0051350:intron 35.0%
TACAACATGAAAGGAAAGAG+TGG + chr1_2:5448579-5448598 None:intergenic 35.0%
!! GTTGTTTTCACTTGACTGAA+AGG - chr1_2:5448769-5448788 Msa0051350:intron 35.0%
CAGCCTCTTGTGTAAAAAAT+AGG - chr1_2:5448814-5448833 Msa0051350:intron 35.0%
GTACAAAACACCAAAATGGT+GGG - chr1_2:5448847-5448866 Msa0051350:intron 35.0%
!! AATAATGGGTACTGTGACAT+TGG - chr1_2:5449071-5449090 Msa0051350:intron 35.0%
!! CTGGCTTTAAGGAAAAGAAA+AGG - chr1_2:5449187-5449206 Msa0051350:intron 35.0%
GAAGAATCTAAGAGTGATGT+TGG + chr1_2:5449370-5449389 None:intergenic 35.0%
GAAGTCAATACTGCTTCTAA+TGG - chr1_2:5449774-5449793 Msa0051350:intron 35.0%
GTTTCAACAGGTACAGATAA+TGG + chr1_2:5449855-5449874 None:intergenic 35.0%
TTCTGATGTAGTCACTATAG+CGG - chr1_2:5450146-5450165 Msa0051350:intron 35.0%
!! TAACAGACTTCTTGGTCTTT+TGG + chr1_2:5450191-5450210 None:intergenic 35.0%
! ACCTCTAGTGTTTTTCTACT+TGG - chr1_2:5450545-5450564 Msa0051350:intron 35.0%
TCCAAGTAGAAAAACACTAG+AGG + chr1_2:5450549-5450568 None:intergenic 35.0%
GGAATTTATCGTAGTGAATC+AGG + chr1_2:5450591-5450610 None:intergenic 35.0%
TTAACCTTAGCAGATGACAT+GGG - chr1_2:5450791-5450810 Msa0051350:intron 35.0%
GCCTAAAATATGGAGAGTTT+AGG - chr1_2:5450835-5450854 Msa0051350:intron 35.0%
ATAAAAGAGAGAATGAGAGG+TGG - chr1_2:5450870-5450889 Msa0051350:intron 35.0%
GAGAGAAAGTGAGAATTAGT+AGG - chr1_2:5450897-5450916 Msa0051350:intron 35.0%
GAGAAAGTGAGAATTAGTAG+GGG - chr1_2:5450899-5450918 Msa0051350:intron 35.0%
GTAGGGGATTTAGTTATATG+AGG - chr1_2:5450915-5450934 Msa0051350:intron 35.0%
GGGATTTAGTTATATGAGGT+GGG - chr1_2:5450919-5450938 Msa0051350:intron 35.0%
!! GGAAGAATCATTGTTTTGCT+TGG - chr1_2:5450968-5450987 Msa0051350:intron 35.0%
TACAAAGACAAAACACGCAA+TGG + chr1_2:5450994-5451013 None:intergenic 35.0%
!! CTTTGTAGAGCATTGCTATT+TGG - chr1_2:5451007-5451026 Msa0051350:intron 35.0%
GGAACGTGAGTATTTATTGA+TGG + chr1_2:5451069-5451088 None:intergenic 35.0%
ATTCTCTTATTGGAGGATAG+TGG - chr1_2:5451230-5451249 Msa0051350:intron 35.0%
CTACAGGTTCATGGTTAAAT+TGG + chr1_2:5451330-5451349 None:intergenic 35.0%
!! CTTTTAACTCTACAGGTTCA+TGG + chr1_2:5451339-5451358 None:intergenic 35.0%
CATGAACCTGTAGAGTTAAA+AGG - chr1_2:5451337-5451356 Msa0051350:intron 35.0%
!! ATCTCTCCTTTTAACTCTAC+AGG + chr1_2:5451346-5451365 None:intergenic 35.0%
TCTGGTTAATGGTTGCTTAA+GGG - chr1_2:5451431-5451450 Msa0051350:intron 35.0%
GATGCTGTTACTGAAATCAT+TGG - chr1_2:5451481-5451500 Msa0051350:intron 35.0%
!! ATAGGCTCTTCTAAAGCTAA+TGG - chr1_2:5451609-5451628 Msa0051350:intron 35.0%
!! TAGGCTCTTCTAAAGCTAAT+GGG - chr1_2:5451610-5451629 Msa0051350:intron 35.0%
! AACAGCCTTTGATTTCATTC+TGG - chr1_2:5451690-5451709 Msa0051350:intron 35.0%
GAGAACCAGAATGAAATCAA+AGG + chr1_2:5451698-5451717 None:intergenic 35.0%
!! AGACAAGTATCAGTTTGCTA+GGG + chr1_2:5451751-5451770 None:intergenic 35.0%
! TAGACAAGTATCAGTTTGCT+AGG + chr1_2:5451752-5451771 None:intergenic 35.0%
TAGCAAACTGATACTTGTCT+AGG - chr1_2:5451751-5451770 Msa0051350:intron 35.0%
GAAAAGAGGAGGTAAATGAT+TGG + chr1_2:5451967-5451986 None:intergenic 35.0%
AAGTTACTTAAAGATGAGGG+CGG + chr1_2:5452103-5452122 None:intergenic 35.0%
GCTTGAGAAACTGATATTGT+TGG - chr1_2:5452139-5452158 Msa0051350:intron 35.0%
ATTTGCACTTCAATGCATGT+TGG - chr1_2:5452339-5452358 Msa0051350:intron 35.0%
TTATGTCATAGCAGTGGAAA+AGG + chr1_2:5452454-5452473 None:intergenic 35.0%
AATGTGTTATGTCATAGCAG+TGG + chr1_2:5452460-5452479 None:intergenic 35.0%
ATAATTTGAAGGGAGAACAG+TGG - chr1_2:5452791-5452810 Msa0051350:intron 35.0%
!! AGTTCTAGGAACAGAATTGA+CGG + chr1_2:5452818-5452837 None:intergenic 35.0%
TACAGACATCTCCAATCTTT+AGG + chr1_2:5452900-5452919 None:intergenic 35.0%
ATCAATGAGGTTGGAAAAGA+TGG - chr1_2:5452958-5452977 Msa0051350:intron 35.0%
TCAATGAGGTTGGAAAAGAT+GGG - chr1_2:5452959-5452978 Msa0051350:intron 35.0%
GCATAAATCTGGAAGTCTTA+TGG + chr1_2:5453047-5453066 None:intergenic 35.0%
ATGTTTCTTCGGCATAAATC+TGG + chr1_2:5453058-5453077 None:intergenic 35.0%
TCTACCGGATTTCTTTAACT+CGG + chr1_2:5453163-5453182 None:intergenic 35.0%
AGCTTCAAATACTTCGAAGA+AGG - chr1_2:5453182-5453201 Msa0051350:intron 35.0%
AAAAGCTGCCCATAAAAAGT+CGG - chr1_2:5453224-5453243 Msa0051350:intron 35.0%
! AACCATACCCGACTTTTTAT+GGG + chr1_2:5453235-5453254 None:intergenic 35.0%
! AAACCATACCCGACTTTTTA+TGG + chr1_2:5453236-5453255 None:intergenic 35.0%
TAGTGAAAGAAAGAACCCAA+AGG - chr1_2:5453410-5453429 Msa0051350:intron 35.0%
GACTGAAGTCATAATTTGGA+AGG + chr1_2:5453470-5453489 None:intergenic 35.0%
ATGGGACTGAAGTCATAATT+TGG + chr1_2:5453474-5453493 None:intergenic 35.0%
ATGAAGAAGTTCAATGTCTG+TGG - chr1_2:5453649-5453668 Msa0051350:intron 35.0%
TAACTTCTGTATTGCAAGCA+GGG + chr1_2:5453812-5453831 None:intergenic 35.0%
TTGTTTCCCCTTGAACATAT+GGG + chr1_2:5453878-5453897 None:intergenic 35.0%
!! ACTATTCACACTTTTTGTGG+CGG - chr1_2:5453897-5453916 Msa0051350:intron 35.0%
GATGTCATTATCACGAACAA+AGG + chr1_2:5453931-5453950 None:intergenic 35.0%
TGATGCAAGTTCGTATATCT+GGG - chr1_2:5453994-5454013 Msa0051350:intron 35.0%
GAAGGTCTTGATCATCAAAA+TGG - chr1_2:5454026-5454045 Msa0051350:intron 35.0%
TTTCTCACAAACATGAACGT+TGG + chr1_2:5454091-5454110 None:intergenic 35.0%
CTCATAATAACCGTCGTTTA+AGG - chr1_2:5454332-5454351 Msa0051350:intron 35.0%
! ATAACCGTCGTTTAAGGTTA+TGG - chr1_2:5454338-5454357 Msa0051350:intron 35.0%
GTAGCATCATAAGGAAATGT+AGG + chr1_2:5454945-5454964 None:intergenic 35.0%
!! CTTTGAAACGGTTAAGTACA+TGG + chr1_2:5455013-5455032 None:intergenic 35.0%
AGGGCAATTTAACCCTTAAT+TGG - chr1_2:5455400-5455419 Msa0051350:intron 35.0%
TTAACCCTTAATTGGAGTCA+AGG - chr1_2:5455408-5455427 Msa0051350:intron 35.0%
ATGCAGTTACAAAGGCTTAA+AGG - chr1_2:5456008-5456027 Msa0051350:intron 35.0%
TGCAGTTACAAAGGCTTAAA+GGG - chr1_2:5456009-5456028 Msa0051350:intron 35.0%
TTCACGAGGAAGAACATAAA+TGG + chr1_2:5456040-5456059 None:intergenic 35.0%
! AAACAAAAAGTGATGGGAGA+AGG - chr1_2:5456115-5456134 Msa0051350:intron 35.0%
ACAAAATAGCAAATCATGGG+AGG - chr1_2:5456144-5456163 Msa0051350:intron 35.0%
! AAGTTGTTGTTGAAAATCGG+TGG + chr1_2:5456224-5456243 None:intergenic 35.0%
CCTCAGTTAACAAAATTGAG+TGG + chr1_2:5456632-5456651 None:intergenic 35.0%
! CCACTCAATTTTGTTAACTG+AGG - chr1_2:5456629-5456648 Msa0051350:CDS 35.0%
! TCAATTTTGTTAACTGAGGG+AGG - chr1_2:5456633-5456652 Msa0051350:CDS 35.0%
! CAATTTTGTTAACTGAGGGA+GGG - chr1_2:5456634-5456653 Msa0051350:CDS 35.0%
GTTGGATAGGAGAATAGTTT+AGG - chr1_2:5456665-5456684 Msa0051350:CDS 35.0%
AAAAGAACAAGCTGCAGTTA+AGG + chr1_2:5456810-5456829 None:intergenic 35.0%
GGCTGAAAAGAAAGTGAAAA+AGG - chr1_2:5456893-5456912 Msa0051350:CDS 35.0%
CTGAAGAATCTAAGAGATGA+TGG + chr1_2:5457063-5457082 None:intergenic 35.0%
AATATAGGGCTGAATACTAC+AGG - chr1_2:5457213-5457232 Msa0051350:intron 35.0%
CACCATTGTACTTAAAGACA+AGG + chr1_2:5457308-5457327 None:intergenic 35.0%
ACAAGCTCATACTAAACAAG+CGG - chr1_2:5457407-5457426 Msa0051350:CDS 35.0%
!! AGGAGTATTGACTTCTTCAA+CGG + chr1_2:5457460-5457479 None:intergenic 35.0%
GAAGAAGTCAATACTCCTAA+TGG - chr1_2:5457462-5457481 Msa0051350:CDS 35.0%
CACCAAAAGAAGCTAATTCT+TGG - chr1_2:5457664-5457683 Msa0051350:CDS 35.0%
!! TCCCAAGAATTAGCTTCTTT+TGG + chr1_2:5457669-5457688 None:intergenic 35.0%
! ACTAGTTTGCACAATGAACA+TGG + chr1_2:5457848-5457867 None:intergenic 35.0%
! TAGTTTTTCCCCCTCTTTAA+TGG - chr1_2:5457864-5457883 Msa0051350:intron 35.0%
GATAATCATAAACCACGCTT+AGG + chr1_2:5457891-5457910 None:intergenic 35.0%
TTATCAGTATCTAGCGATAC+AGG - chr1_2:5457906-5457925 Msa0051350:intron 35.0%
!! CACTAGATTTTCGTATCGAT+TGG + chr1_2:5457965-5457984 None:intergenic 35.0%
AAGGTAATAAGCCCAAAGTA+TGG - chr1_2:5458127-5458146 Msa0051350:intron 35.0%
GCATAAACTCTCCATACTTT+GGG + chr1_2:5458141-5458160 None:intergenic 35.0%
GAGGGAAAGTTAGAATTAGT+TGG - chr1_2:5458200-5458219 Msa0051350:intron 35.0%
!! TAGTTGGTTAGTTGGTGATT+CGG - chr1_2:5458216-5458235 Msa0051350:intron 35.0%
CACATTTCATTTGCGATTCT+CGG - chr1_2:5458373-5458392 Msa0051350:intron 35.0%
!! TGACAAGTATCAGTTTGCTA+GGG + chr1_2:5458446-5458465 None:intergenic 35.0%
! ATGACAAGTATCAGTTTGCT+AGG + chr1_2:5458447-5458466 None:intergenic 35.0%
TAGCAAACTGATACTTGTCA+TGG - chr1_2:5458446-5458465 Msa0051350:intron 35.0%
TTAAGAAAAAGGATAGGCTC+TGG + chr1_2:5458507-5458526 None:intergenic 35.0%
AATTGTTCAATTCCACACAG+AGG - chr1_2:5458539-5458558 Msa0051350:CDS 35.0%
ATTTGCTTGAGAAACTGATC+TGG - chr1_2:5458763-5458782 Msa0051350:intron 35.0%
!!! TCTTTGAGACCATCTTTTAC+TGG + chr1_2:5458889-5458908 None:intergenic 35.0%
GCATCATACGAAATTATGGA+TGG + chr1_2:5458917-5458936 None:intergenic 35.0%
ACAGGCATCATACGAAATTA+TGG + chr1_2:5458921-5458940 None:intergenic 35.0%
! GTTGACTCATTAATTAGGAC+AGG + chr1_2:5458939-5458958 None:intergenic 35.0%
! CCAAGGTTGACTCATTAATT+AGG + chr1_2:5458944-5458963 None:intergenic 35.0%
CCTAATTAATGAGTCAACCT+TGG - chr1_2:5458941-5458960 Msa0051350:intron 35.0%
TTGACAAACTTCTCAACTAC+TGG - chr1_2:5459046-5459065 Msa0051350:intron 35.0%
! TATACCCCGTCAATTTTCTA+TGG - chr1_2:5459314-5459333 Msa0051350:intron 35.0%
ATGTGCCATAGAAAATTGAC+GGG + chr1_2:5459322-5459341 None:intergenic 35.0%
GATGTGCCATAGAAAATTGA+CGG + chr1_2:5459323-5459342 None:intergenic 35.0%
!! CTTTTTGGCACTTTAGATGT+GGG + chr1_2:5459414-5459433 None:intergenic 35.0%
!! ACTTTTTGGCACTTTAGATG+TGG + chr1_2:5459415-5459434 None:intergenic 35.0%
!!! CGTCTTCAAGTTGTTTTAGA+AGG + chr1_2:5459854-5459873 None:intergenic 35.0%
ATGCAAGTGACTCTAATAGT+TGG + chr1_2:5459878-5459897 None:intergenic 35.0%
ACTTGCATAATCGGTTAATG+CGG - chr1_2:5459890-5459909 Msa0051350:intron 35.0%
! AGTGGTTTGATGGATAAACT+AGG - chr1_2:5459951-5459970 Msa0051350:intron 35.0%
AAAGTAACGTGTCTTTGTCT+TGG + chr1_2:5461305-5461324 None:intergenic 35.0%
CTATTTCATTCTCAAATGGG+AGG - chr1_2:5461373-5461392 Msa0051350:intron 35.0%
TACTCAGAAATTGGGTGAAA+TGG + chr1_2:5461450-5461469 None:intergenic 35.0%
! AAGTTGTTGTTGAAAATGGG+TGG + chr1_2:5461473-5461492 None:intergenic 35.0%
GAACTAACAAGTGCAGTTAA+AGG + chr1_2:5461629-5461648 None:intergenic 35.0%
CACCATTGTACTTAAAGACA+AGG + chr1_2:5457308-5457327 None:intergenic 35.0%
TTCAAAGAATTCTGTCAGAG+AGG - chr1_2:5462121-5462140 Msa0051350:CDS 35.0%
CATTCAACACCAGCATTAAA+AGG + chr1_2:5462155-5462174 None:intergenic 35.0%
! TTTAATGCTGGTGTTGAATG+TGG - chr1_2:5462155-5462174 Msa0051350:CDS 35.0%
TTAAGACGCTGAAATTTCTC+GGG + chr1_2:5462185-5462204 None:intergenic 35.0%
GTTAAGACGCTGAAATTTCT+CGG + chr1_2:5462186-5462205 None:intergenic 35.0%
! TCGCTAGAATTAGCTTCTTT+GGG + chr1_2:5462422-5462441 None:intergenic 35.0%
ACTATAACATTCTGATGCCA+TGG - chr1_2:5462542-5462561 Msa0051350:intron 35.0%
CTATAACATTCTGATGCCAT+GGG - chr1_2:5462543-5462562 Msa0051350:intron 35.0%
TAGGACCATTATAAAAAGGG+GGG + chr1_2:5462631-5462650 None:intergenic 35.0%
CGCTTAGGACCATTATAAAA+AGG + chr1_2:5462635-5462654 None:intergenic 35.0%
GATACTGATAAAACACGCTT+AGG + chr1_2:5462650-5462669 None:intergenic 35.0%
ACTACATGTTCGTACAGATT+CGG + chr1_2:5462717-5462736 None:intergenic 35.0%
AAAACTGATCATAGGGAATC+AGG + chr1_2:5462774-5462793 None:intergenic 35.0%
AATTGTTCAATTCCACACAG+AGG - chr1_2:5458539-5458558 Msa0051350:CDS 35.0%
CTGTCAAAAGTCATCAAGAA+AGG - chr1_2:5462955-5462974 Msa0051350:intron 35.0%
! ATAAAAAAGTTCAGTGTCGG+TGG - chr1_2:5463034-5463053 Msa0051350:intron 35.0%
ATCACTATGGGAATTATGGA+TGG + chr1_2:5463310-5463329 None:intergenic 35.0%
CTGTATCACTATGGGAATTA+TGG + chr1_2:5463314-5463333 None:intergenic 35.0%
TCTTCCTATTCAACTGTGAT+TGG - chr1_2:5463373-5463392 Msa0051350:intron 35.0%
AATGCCAATCACAGTTGAAT+AGG + chr1_2:5463380-5463399 None:intergenic 35.0%
! TGTACCCTGTGAATTTTCAA+TGG - chr1_2:5463449-5463468 Msa0051350:intron 35.0%
! TGTGCCATTGAAAATTCACA+GGG + chr1_2:5463456-5463475 None:intergenic 35.0%
! ATGTGCCATTGAAAATTCAC+AGG + chr1_2:5463457-5463476 None:intergenic 35.0%
ATAATTTGAAGGGAGAACGT+TGG - chr1_2:5463508-5463527 Msa0051350:intron 35.0%
ATGTACATTTAGTGGCTTGA+TGG - chr1_2:5464072-5464091 Msa0051350:five_prime_UTR 35.0%
ACTGTCTTGCGTTCGAAAAT+GGG - chr1_2:5446591-5446610 Msa0051350:three_prime_UTR 40.0%
CTTGGGAGAAAGAGATTTAC+TGG - chr1_2:5446637-5446656 Msa0051350:intron 40.0%
!! AAGTTGGTGTTGAAAATCGG+TGG + chr1_2:5446706-5446725 None:intergenic 40.0%
!! CAAGCAAGTTGGTTCATGAA+GGG + chr1_2:5446927-5446946 None:intergenic 40.0%
CCCGGTGTGAGAATTTATAT+AGG - chr1_2:5446980-5446999 Msa0051350:intron 40.0%
CTCAAAATCATGGCTCAAAG+GGG + chr1_2:5447019-5447038 None:intergenic 40.0%
CCTCAAAATCATGGCTCAAA+GGG + chr1_2:5447020-5447039 None:intergenic 40.0%
ACCTCAAAATCATGGCTCAA+AGG + chr1_2:5447021-5447040 None:intergenic 40.0%
CACATTGCAGTAGAATCTGT+TGG - chr1_2:5447062-5447081 Msa0051350:intron 40.0%
CATTGCAGTAGAATCTGTTG+GGG - chr1_2:5447064-5447083 Msa0051350:intron 40.0%
! GTAGAATCTGTTGGGGATTT+TGG - chr1_2:5447071-5447090 Msa0051350:intron 40.0%
! AGAATCTGTTGGGGATTTTG+GGG - chr1_2:5447073-5447092 Msa0051350:intron 40.0%
! ACCTCATGCCTTAAGGTTTT+GGG + chr1_2:5447161-5447180 None:intergenic 40.0%
! TACCTCATGCCTTAAGGTTT+TGG + chr1_2:5447162-5447181 None:intergenic 40.0%
ACCTTAAGGCATGAGGTATA+TGG - chr1_2:5447164-5447183 Msa0051350:intron 40.0%
CCTTAAGGCATGAGGTATAT+GGG - chr1_2:5447165-5447184 Msa0051350:intron 40.0%
! TGTTGGGTTTAAAGTGTGAG+TGG + chr1_2:5447239-5447258 None:intergenic 40.0%
! GTCTAAAACAAAAGGCACAG+GGG - chr1_2:5447315-5447334 Msa0051350:intron 40.0%
! TCTAAAACAAAAGGCACAGG+GGG - chr1_2:5447316-5447335 Msa0051350:intron 40.0%
CTCTCTTGAGAGAAAGAGAA+AGG - chr1_2:5447517-5447536 Msa0051350:intron 40.0%
CTTGAGAGAAAGAGAAAGGT+AGG - chr1_2:5447521-5447540 Msa0051350:intron 40.0%
GGTCTGTTCATGTTGAACAT+TGG - chr1_2:5447550-5447569 Msa0051350:intron 40.0%
CTGTTCATGTTGAACATTGG+AGG - chr1_2:5447553-5447572 Msa0051350:intron 40.0%
!! GTTGATAGTGAATCAGAGAG+CGG - chr1_2:5447615-5447634 Msa0051350:intron 40.0%
CCAAATTGACCTACGTTTAG+GGG + chr1_2:5447647-5447666 None:intergenic 40.0%
CCCAAATTGACCTACGTTTA+GGG + chr1_2:5447648-5447667 None:intergenic 40.0%
CCCTAAACGTAGGTCAATTT+GGG - chr1_2:5447645-5447664 Msa0051350:intron 40.0%
GAGTGGTTTGAATTCACAAC+AGG - chr1_2:5447817-5447836 Msa0051350:intron 40.0%
GAAAAAGGAGATTGTAGCGT+AGG - chr1_2:5447865-5447884 Msa0051350:intron 40.0%
! GATTGTAGCGTAGGTTTTCT+TGG - chr1_2:5447874-5447893 Msa0051350:intron 40.0%
AACTCCACTAGGACCTTTAA+GGG + chr1_2:5448137-5448156 None:intergenic 40.0%
CCCCATTGTACTTAAAGACA+AGG + chr1_2:5448258-5448277 None:intergenic 40.0%
TGGAGATAGTTTCTGTGAGA+AGG - chr1_2:5448306-5448325 Msa0051350:intron 40.0%
GACAAGCTCATACTGAACAA+GGG - chr1_2:5448356-5448375 Msa0051350:intron 40.0%
! TACTGAACAAGGGTGTAACA+AGG - chr1_2:5448366-5448385 Msa0051350:intron 40.0%
! ACTGAACAAGGGTGTAACAA+GGG - chr1_2:5448367-5448386 Msa0051350:intron 40.0%
ATTCAACACCGCCATTAGAA+GGG + chr1_2:5448429-5448448 None:intergenic 40.0%
CAGTTCGCCTGAAAAATCAT+GGG - chr1_2:5448450-5448469 Msa0051350:intron 40.0%
! TCTTCCTCCCATGATTTTTC+AGG + chr1_2:5448460-5448479 None:intergenic 40.0%
GAGTGGTGTGAAAGAGAAAA+AGG + chr1_2:5448562-5448581 None:intergenic 40.0%
TCACTTGACTGAAAGGTCAT+AGG - chr1_2:5448776-5448795 Msa0051350:intron 40.0%
CTGCGTACAAAACACCAAAA+TGG - chr1_2:5448843-5448862 Msa0051350:intron 40.0%
CGTACAAAACACCAAAATGG+TGG - chr1_2:5448846-5448865 Msa0051350:intron 40.0%
TTTCCTTAAAGCCAGATGCA+TGG + chr1_2:5449182-5449201 None:intergenic 40.0%
!! CCTTTAAGGGTCACATTTTC+TGG + chr1_2:5449483-5449502 None:intergenic 40.0%
CCAGAAAATGTGACCCTTAA+AGG - chr1_2:5449480-5449499 Msa0051350:intron 40.0%
! TATTTTCCATGCAACACCAC+CGG + chr1_2:5449508-5449527 None:intergenic 40.0%
!! GTGGTGTTGCATGGAAAATA+GGG - chr1_2:5449508-5449527 Msa0051350:intron 40.0%
AGACGATACTGTTTACTTCG+TGG - chr1_2:5449542-5449561 Msa0051350:intron 40.0%
GATACTGTTTACTTCGTGGA+CGG - chr1_2:5449546-5449565 Msa0051350:intron 40.0%
GCCATACTCAAACTGAACTA+GGG - chr1_2:5449715-5449734 Msa0051350:intron 40.0%
CCATACTCAAACTGAACTAG+GGG - chr1_2:5449716-5449735 Msa0051350:intron 40.0%
CATACTCAAACTGAACTAGG+GGG - chr1_2:5449717-5449736 Msa0051350:intron 40.0%
GTCAATACTGCTTCTAATGG+TGG - chr1_2:5449777-5449796 Msa0051350:intron 40.0%
! TCTAATGGTGGTGTTGAATG+TGG - chr1_2:5449789-5449808 Msa0051350:intron 40.0%
TATCAGCTATGAACTGCTCA+GGG + chr1_2:5449920-5449939 None:intergenic 40.0%
! TCTTCTCTTGCTCCTTTTTC+CGG + chr1_2:5449985-5450004 None:intergenic 40.0%
CGACATCAGCTAATTGTTGT+TGG - chr1_2:5450009-5450028 Msa0051350:intron 40.0%
GCTTATAACAAGCAACACTC+AGG - chr1_2:5450050-5450069 Msa0051350:intron 40.0%
TCTGTTAATGAAGTTACGCC+TGG - chr1_2:5450204-5450223 Msa0051350:intron 40.0%
CAAGCAAAAACAGCTACTTC+TGG - chr1_2:5450249-5450268 Msa0051350:intron 40.0%
GCTTGTAACAAGGAAAACTC+AGG - chr1_2:5450294-5450313 Msa0051350:intron 40.0%
GTGAATCAGGTTTCAGTATG+AGG + chr1_2:5450578-5450597 None:intergenic 40.0%
CATGTCATCTGCTAAGGTTA+AGG + chr1_2:5450792-5450811 None:intergenic 40.0%
CTTAACCTTAGCAGATGACA+TGG - chr1_2:5450790-5450809 Msa0051350:intron 40.0%
GGGGATTTAGTTATATGAGG+TGG - chr1_2:5450918-5450937 Msa0051350:intron 40.0%
!! AGCATTGCTATTTGGGTAGT+AGG - chr1_2:5451015-5451034 Msa0051350:intron 40.0%
!! GCATTGCTATTTGGGTAGTA+GGG - chr1_2:5451016-5451035 Msa0051350:intron 40.0%
!! CATTGCTATTTGGGTAGTAG+GGG - chr1_2:5451017-5451036 Msa0051350:intron 40.0%
GGTAAAAAAGACACGCTGAA+GGG + chr1_2:5451048-5451067 None:intergenic 40.0%
TGGTAAAAAAGACACGCTGA+AGG + chr1_2:5451049-5451068 None:intergenic 40.0%
CACGTTCCATTTGTAATTCC+CGG - chr1_2:5451081-5451100 Msa0051350:intron 40.0%
GACAAACCGGGAATTACAAA+TGG + chr1_2:5451090-5451109 None:intergenic 40.0%
AACAAATTAGTCCTACCTGC+CGG - chr1_2:5451143-5451162 Msa0051350:intron 40.0%
ATTAGTGGAAAGGAATGGCA+AGG - chr1_2:5451166-5451185 Msa0051350:intron 40.0%
!! AAACTGACAGAGAGAGTACT+AGG - chr1_2:5451200-5451219 Msa0051350:intron 40.0%
AGGAGTTCGCATTCTCTTAT+TGG - chr1_2:5451220-5451239 Msa0051350:intron 40.0%
AGTTCGCATTCTCTTATTGG+AGG - chr1_2:5451223-5451242 Msa0051350:intron 40.0%
GTCTGGTTAATGGTTGCTTA+AGG - chr1_2:5451430-5451449 Msa0051350:intron 40.0%
AAGCTCCACTGAGAATATCA+TGG + chr1_2:5451904-5451923 None:intergenic 40.0%
GCTATCTCTTTCTCATCATG+TGG + chr1_2:5451944-5451963 None:intergenic 40.0%
! TGAGATGTAGAAGCTTGCTT+AGG + chr1_2:5452419-5452438 None:intergenic 40.0%
!! CTTGCATGCAATCTAGTTCT+AGG + chr1_2:5452832-5452851 None:intergenic 40.0%
CATGCAAGTCACATTCTATG+CGG - chr1_2:5452844-5452863 Msa0051350:intron 40.0%
! GGATGGTTGAATTTTGTTCG+TGG - chr1_2:5452868-5452887 Msa0051350:intron 40.0%
ATTACGTGTTCGCATCAATG+AGG - chr1_2:5452945-5452964 Msa0051350:intron 40.0%
!!! ACAAGCTAGTTTTCCAACCT+GGG + chr1_2:5452992-5453011 None:intergenic 40.0%
!!! TACAAGCTAGTTTTCCAACC+TGG + chr1_2:5452993-5453012 None:intergenic 40.0%
TAGTATGCTTAGTGCAAGAC+AGG - chr1_2:5453011-5453030 Msa0051350:intron 40.0%
TCCTCCGAGTTAAAGAAATC+CGG - chr1_2:5453156-5453175 Msa0051350:intron 40.0%
! CGAAGTATTTGAAGCTCTAC+CGG + chr1_2:5453178-5453197 None:intergenic 40.0%
TCAAATACTTCGAAGAAGGC+AGG - chr1_2:5453186-5453205 Msa0051350:intron 40.0%
CAAATACTTCGAAGAAGGCA+GGG - chr1_2:5453187-5453206 Msa0051350:intron 40.0%
!!! TTATGGGCAGCTTTTGACTT+GGG + chr1_2:5453219-5453238 None:intergenic 40.0%
!! TTTATGGGCAGCTTTTGACT+TGG + chr1_2:5453220-5453239 None:intergenic 40.0%
AAAGCTGCCCATAAAAAGTC+GGG - chr1_2:5453225-5453244 Msa0051350:intron 40.0%
TCATCAACATGGTGTTTCCT+CGG + chr1_2:5453523-5453542 None:intergenic 40.0%
! AGGAAACACCATGTTGATGA+TGG - chr1_2:5453523-5453542 Msa0051350:intron 40.0%
AGCTTAGTCCATCATCAACA+TGG + chr1_2:5453534-5453553 None:intergenic 40.0%
TGTCTGTGGATCATACACTT+TGG - chr1_2:5453663-5453682 Msa0051350:intron 40.0%
TGTGGATCATACACTTTGGT+GGG - chr1_2:5453667-5453686 Msa0051350:intron 40.0%
GTAACTTCTGTATTGCAAGC+AGG + chr1_2:5453813-5453832 None:intergenic 40.0%
GCAATTCAAGAGGCAAATGT+TGG - chr1_2:5453838-5453857 Msa0051350:intron 40.0%
! GTTGTTTCCCCTTGAACATA+TGG + chr1_2:5453879-5453898 None:intergenic 40.0%
GTGATGCAAGTTCGTATATC+TGG - chr1_2:5453993-5454012 Msa0051350:intron 40.0%
GATGCAAGTTCGTATATCTG+GGG - chr1_2:5453995-5454014 Msa0051350:intron 40.0%
CGTTGTCTATAACATCCAGT+AGG - chr1_2:5454259-5454278 Msa0051350:intron 40.0%
! GGAGTGCTATTGAAATACAC+AGG - chr1_2:5454843-5454862 Msa0051350:intron 40.0%
TTGTGTCTAAGGGACGAAAA+TGG + chr1_2:5455116-5455135 None:intergenic 40.0%
AGACGTTAGTCACAAAGCAA+TGG - chr1_2:5455367-5455386 Msa0051350:intron 40.0%
ACCTCCTTGACTCCAATTAA+GGG + chr1_2:5455415-5455434 None:intergenic 40.0%
TACCTCCTTGACTCCAATTA+AGG + chr1_2:5455416-5455435 None:intergenic 40.0%
CTCATGAATAAATGAGGGGA+TGG - chr1_2:5455730-5455749 Msa0051350:intron 40.0%
AGTTACAAAGGCTTAAAGGG+AGG - chr1_2:5456012-5456031 Msa0051350:intron 40.0%
! ACGACACAAACAAAGGTACA+AGG + chr1_2:5456085-5456104 None:intergenic 40.0%
CAAGAGAACGACACAAACAA+AGG + chr1_2:5456092-5456111 None:intergenic 40.0%
CATGGGAGGAAGAGATTTAT+TGG - chr1_2:5456158-5456177 Msa0051350:intron 40.0%
TGCTCAGAAAAAGGGTGAAA+TGG + chr1_2:5456201-5456220 None:intergenic 40.0%
TGCTTATAATAGTGACCGGA+GGG + chr1_2:5456537-5456556 None:intergenic 40.0%
TTGCTTATAATAGTGACCGG+AGG + chr1_2:5456536-5456555 None:intergenic 40.0%
TTGCTTATAATAGTGACCGG+AGG - chr1_2:5456536-5456555 Msa0051350:CDS 40.0%
TGCTTATAATAGTGACCGGA+GGG - chr1_2:5456537-5456556 Msa0051350:CDS 40.0%
AAGCATATATGTACTCCCTC+CGG + chr1_2:5456555-5456574 None:intergenic 40.0%
GAGGGACTATATAGTTGGAT+AGG - chr1_2:5456652-5456671 Msa0051350:CDS 40.0%
!! CCTTTAAGGGTCACATTTTC+TGG + chr1_2:5449483-5449502 None:intergenic 40.0%
CCAGAAAATGTGACCCTTAA+AGG - chr1_2:5449480-5449499 Msa0051350:intron 40.0%
AACTCCACTAGGACCTTTAA+GGG + chr1_2:5448137-5448156 None:intergenic 40.0%
ATATTCCACACAACTCCACT+AGG + chr1_2:5457198-5457217 None:intergenic 40.0%
AGTGGAGTTGTGTGGAATAT+AGG - chr1_2:5457198-5457217 Msa0051350:intron 40.0%
GTGGAGTTGTGTGGAATATA+GGG - chr1_2:5457199-5457218 Msa0051350:intron 40.0%
CAATGGTGAATCACTCTTTG+AGG - chr1_2:5457320-5457339 Msa0051350:CDS 40.0%
CAAGCTCATACTAAACAAGC+GGG - chr1_2:5457408-5457427 Msa0051350:CDS 40.0%
ACTAAACAAGCGGGTAACAA+AGG - chr1_2:5457417-5457436 Msa0051350:CDS 40.0%
GAAGTCAATACTCCTAATGG+TGG - chr1_2:5457465-5457484 Msa0051350:CDS 40.0%
CATTCAACAACACCACCATT+AGG + chr1_2:5457480-5457499 None:intergenic 40.0%
TCAAGACTCCGAAATTTCTC+AGG + chr1_2:5457510-5457529 None:intergenic 40.0%
TTCTATAACAGGCTTCTCAG+GGG + chr1_2:5457610-5457629 None:intergenic 40.0%
CTTCTATAACAGGCTTCTCA+GGG + chr1_2:5457611-5457630 None:intergenic 40.0%
ACTTCTATAACAGGCTTCTC+AGG + chr1_2:5457612-5457631 None:intergenic 40.0%
ACAGGCGTAACTTCTATAAC+AGG + chr1_2:5457621-5457640 None:intergenic 40.0%
TTCTTGCTCGCTTATTAGTC+TGG + chr1_2:5457644-5457663 None:intergenic 40.0%
ACGCTTAGGACCATTAAAGA+GGG + chr1_2:5457877-5457896 None:intergenic 40.0%
CTTAACCTTAGCAGATGACA+TGG - chr1_2:5450790-5450809 Msa0051350:intron 40.0%
GCTTATTACCTTTGTCACTG+AGG + chr1_2:5458119-5458138 None:intergenic 40.0%
CGCATAAACTCTCCATACTT+TGG + chr1_2:5458142-5458161 None:intergenic 40.0%
AAGTATGGAGAGTTTATGCG+AGG - chr1_2:5458142-5458161 Msa0051350:intron 40.0%
GAAAAGAGAGAATGATGAGG+TGG - chr1_2:5458173-5458192 Msa0051350:intron 40.0%
!! GTTGGTGATTCGGTTATATG+AGG - chr1_2:5458226-5458245 Msa0051350:intron 40.0%
!! GTGATTCGGTTATATGAGGT+GGG - chr1_2:5458230-5458249 Msa0051350:intron 40.0%
TGTGTAGAGGATTGCTCTTT+GGG - chr1_2:5458322-5458341 Msa0051350:intron 40.0%
!! GACAAGTATCAGTTTGCTAG+GGG + chr1_2:5451750-5451769 None:intergenic 40.0%
ATCAAAACGTTTCATGTCGG+TGG - chr1_2:5458645-5458664 Msa0051350:CDS 40.0%
! TGCTTTATTCCATGCTTACC+AGG + chr1_2:5458848-5458867 None:intergenic 40.0%
TCTTGCACTTCAATGCATGT+TGG - chr1_2:5458984-5459003 Msa0051350:intron 40.0%
ACTTTCCTATTCACTGTGCT+TGG - chr1_2:5459238-5459257 Msa0051350:intron 40.0%
TAATGCCAAGCACAGTGAAT+AGG + chr1_2:5459246-5459265 None:intergenic 40.0%
TGTGCCATAGAAAATTGACG+GGG + chr1_2:5459321-5459340 None:intergenic 40.0%
! GCACATAGAGTGTGACTTTT+TGG + chr1_2:5459429-5459448 None:intergenic 40.0%
AAAAGTCACACTCTATGTGC+AGG - chr1_2:5459429-5459448 Msa0051350:intron 40.0%
ATCACTGAGGTTGGAAAAGA+AGG - chr1_2:5459540-5459559 Msa0051350:intron 40.0%
TCACTGAGGTTGGAAAAGAA+GGG - chr1_2:5459541-5459560 Msa0051350:intron 40.0%
GCAGAATGTTAGCAGGTATA+TGG + chr1_2:5459652-5459671 None:intergenic 40.0%
TAACGTGTCTTTGTCTTGGT+GGG + chr1_2:5461301-5461320 None:intergenic 40.0%
TTTCATTCTCAAATGGGAGG+TGG - chr1_2:5461376-5461395 Msa0051350:intron 40.0%
ATGGGTGGTACTCAGAAATT+GGG + chr1_2:5461458-5461477 None:intergenic 40.0%
AATGGGTGGTACTCAGAAAT+TGG + chr1_2:5461459-5461478 None:intergenic 40.0%
!! CCTTTAAGGGTCACATTTTC+TGG + chr1_2:5449483-5449502 None:intergenic 40.0%
CCAGAAAATGTGACCCTTAA+AGG - chr1_2:5449480-5449499 Msa0051350:intron 40.0%
AACTCCACTAGGACCTTTAA+GGG + chr1_2:5448137-5448156 None:intergenic 40.0%
GATACTGTTTACTTCACGGA+CGG - chr1_2:5461912-5461931 Msa0051350:intron 40.0%
CAATGGTGAATCACTCTTTG+AGG - chr1_2:5457320-5457339 Msa0051350:CDS 40.0%
GACAAGCTCATACTGAACAA+GGG - chr1_2:5448356-5448375 Msa0051350:intron 40.0%
ACAAGCTCATACTGAACAAG+GGG - chr1_2:5448357-5448376 Msa0051350:intron 40.0%
! GTCAATGCTCCTTTTAATGC+TGG - chr1_2:5462143-5462162 Msa0051350:CDS 40.0%
! GTTTCAAAAGGTACGGCTAA+TGG + chr1_2:5462221-5462240 None:intergenic 40.0%
ATCAGCCATGCATTTCTTAG+GGG + chr1_2:5462285-5462304 None:intergenic 40.0%
CATCAGCCATGCATTTCTTA+GGG + chr1_2:5462286-5462305 None:intergenic 40.0%
! CTTCTTCTTAGTCCTTTTGC+CGG + chr1_2:5462351-5462370 None:intergenic 40.0%
! CTAGAATTAGCTTCTTTGGG+TGG + chr1_2:5462419-5462438 None:intergenic 40.0%
! CTCGCTAGAATTAGCTTCTT+TGG + chr1_2:5462423-5462442 None:intergenic 40.0%
TGATTTGAGGGCTTGTAACA+AGG - chr1_2:5462451-5462470 Msa0051350:intron 40.0%
GCTTGTAACAAGGAACATTC+TGG - chr1_2:5462461-5462480 Msa0051350:intron 40.0%
TGTGCAGCATAAAAAACCCA+TGG + chr1_2:5462562-5462581 None:intergenic 40.0%
! CATGTCCCCCCTTTTTATAA+TGG - chr1_2:5462623-5462642 Msa0051350:intron 40.0%
TATATGGAGGATGGTTAGCA+TGG - chr1_2:5463229-5463248 Msa0051350:intron 40.0%
TCAATGGCACATCTTCCAAA+AGG - chr1_2:5463465-5463484 Msa0051350:intron 40.0%
!! CTGCCTTTTAGCTATAGCAA+CGG + chr1_2:5463544-5463563 None:intergenic 40.0%
ACAAGTCACATTCTATCTGC+AGG - chr1_2:5463570-5463589 Msa0051350:intron 40.0%
ATCTCCAACCTTTATGCCAT+TGG + chr1_2:5463616-5463635 None:intergenic 40.0%
AAGAGTCGCAGAAGACTTTA+TGG - chr1_2:5463842-5463861 Msa0051350:CDS 40.0%
ATCTTCCTCGTGAACTGTTG+AGG - chr1_2:5446479-5446498 Msa0051350:three_prime_UTR 45.0%
TTAAGCCTCAACAGTTCACG+AGG + chr1_2:5446487-5446506 None:intergenic 45.0%
! GACGAGAAGAGAAAAGGTAC+AGG + chr1_2:5446512-5446531 None:intergenic 45.0%
! GTTCTGGACGAGAAGAGAAA+AGG + chr1_2:5446518-5446537 None:intergenic 45.0%
GAGAAAGTTGCAAGCTGTTC+TGG + chr1_2:5446534-5446553 None:intergenic 45.0%
GAACAGCTTGCAACTTTCTC+TGG - chr1_2:5446534-5446553 Msa0051350:three_prime_UTR 45.0%
CACTGTCTTGCGTTCGAAAA+TGG - chr1_2:5446590-5446609 Msa0051350:three_prime_UTR 45.0%
AGGTGGAAGCAGCAAATCTT+GGG - chr1_2:5446620-5446639 Msa0051350:three_prime_UTR 45.0%
! CGGTGGTGGTTTGAAGAAAT+TGG + chr1_2:5446689-5446708 None:intergenic 45.0%
!! TTGGTGTTGAAAATCGGTGG+TGG + chr1_2:5446703-5446722 None:intergenic 45.0%
AAGTGCATGCACTCACAAGT+TGG + chr1_2:5446722-5446741 None:intergenic 45.0%
!! GCAAGCAAGTTGGTTCATGA+AGG + chr1_2:5446928-5446947 None:intergenic 45.0%
TGACTTCCAAGTTCCAACGT+GGG + chr1_2:5446956-5446975 None:intergenic 45.0%
ATGACTTCCAAGTTCCAACG+TGG + chr1_2:5446957-5446976 None:intergenic 45.0%
GAACTTGGAAGTCATGAACC+CGG - chr1_2:5446962-5446981 Msa0051350:intron 45.0%
! CCCTTTGAGCCATGATTTTG+AGG - chr1_2:5447017-5447036 Msa0051350:intron 45.0%
! GAATCTGTTGGGGATTTTGG+GGG - chr1_2:5447074-5447093 Msa0051350:intron 45.0%
! AATCTGTTGGGGATTTTGGG+GGG - chr1_2:5447075-5447094 Msa0051350:intron 45.0%
!!! TAAGGTTTTGGGTGGAGATG+TGG + chr1_2:5447150-5447169 None:intergenic 45.0%
CATCTCCACCCAAAACCTTA+AGG - chr1_2:5447150-5447169 Msa0051350:intron 45.0%
!!! TCATGCCTTAAGGTTTTGGG+TGG + chr1_2:5447158-5447177 None:intergenic 45.0%
ACCCAAAACCTTAAGGCATG+AGG - chr1_2:5447157-5447176 Msa0051350:intron 45.0%
CCCATATACCTCATGCCTTA+AGG + chr1_2:5447168-5447187 None:intergenic 45.0%
! CTAAAACAAAAGGCACAGGG+GGG - chr1_2:5447317-5447336 Msa0051350:intron 45.0%
! TAAAACAAAAGGCACAGGGG+GGG - chr1_2:5447318-5447337 Msa0051350:intron 45.0%
CCCCTAAACGTAGGTCAATT+TGG - chr1_2:5447644-5447663 Msa0051350:intron 45.0%
GCCCAAATTGACCTACGTTT+AGG + chr1_2:5447649-5447668 None:intergenic 45.0%
! CCTTTAAGGGTCACATTGTC+TGG + chr1_2:5448124-5448143 None:intergenic 45.0%
CCAGACAATGTGACCCTTAA+AGG - chr1_2:5448121-5448140 Msa0051350:intron 45.0%
CAACTCCACTAGGACCTTTA+AGG + chr1_2:5448138-5448157 None:intergenic 45.0%
ACATTCCACACAACTCCACT+AGG + chr1_2:5448148-5448167 None:intergenic 45.0%
AGTGGAGTTGTGTGGAATGT+CGG - chr1_2:5448148-5448167 Msa0051350:intron 45.0%
GGACAAGCTCATACTGAACA+AGG - chr1_2:5448355-5448374 Msa0051350:intron 45.0%
GAAGTCAGTACCCCTTCTAA+TGG - chr1_2:5448415-5448434 Msa0051350:intron 45.0%
TTCAACACCGCCATTAGAAG+GGG + chr1_2:5448428-5448447 None:intergenic 45.0%
CATTCAACACCGCCATTAGA+AGG + chr1_2:5448430-5448449 None:intergenic 45.0%
GCAGTTCGCCTGAAAAATCA+TGG - chr1_2:5448449-5448468 Msa0051350:intron 45.0%
TTCGCCTGAAAAATCATGGG+AGG - chr1_2:5448453-5448472 Msa0051350:intron 45.0%
CATGGGAGGAAGACATTTAC+TGG - chr1_2:5448467-5448486 Msa0051350:intron 45.0%
TGGGAAGAAGTTGGGTGAAA+TGG + chr1_2:5448510-5448529 None:intergenic 45.0%
AAGGTCATAGGTTCAAGTCC+TGG - chr1_2:5448788-5448807 Msa0051350:intron 45.0%
AGGTCATAGGTTCAAGTCCT+GGG - chr1_2:5448789-5448808 Msa0051350:intron 45.0%
ATGCAGGACCTTTAGTGATC+CGG - chr1_2:5448891-5448910 Msa0051350:intron 45.0%
GAATTGTAAAAAGGGCAGCC+CGG + chr1_2:5448913-5448932 None:intergenic 45.0%
CAATAGAGGAACCATGCATC+TGG - chr1_2:5449168-5449187 Msa0051350:intron 45.0%
!! GAACCATGCATCTGGCTTTA+AGG - chr1_2:5449176-5449195 Msa0051350:intron 45.0%
AATGTGACCCTTAAAGGTCC+CGG - chr1_2:5448127-5448146 Msa0051350:intron 45.0%
! ATTTTCCATGCAACACCACC+GGG + chr1_2:5449507-5449526 None:intergenic 45.0%
!! GGTGGTGTTGCATGGAAAAT+AGG - chr1_2:5449507-5449526 Msa0051350:intron 45.0%
GGCCATACTCAAACTGAACT+AGG - chr1_2:5449714-5449733 Msa0051350:intron 45.0%
CCCCTAGTTCAGTTTGAGTA+TGG + chr1_2:5449719-5449738 None:intergenic 45.0%
ATCAGCTATGAACTGCTCAG+GGG + chr1_2:5449919-5449938 None:intergenic 45.0%
GTATCAGCTATGAACTGCTC+AGG + chr1_2:5449921-5449940 None:intergenic 45.0%
GTAGGGAAACTGTATAGCTG+TGG + chr1_2:5449955-5449974 None:intergenic 45.0%
!! CTTTTTCCGGTTGGTTGGTA+GGG + chr1_2:5449972-5449991 None:intergenic 45.0%
!! TTGTTGGAGAGCACTTGACT+GGG - chr1_2:5450025-5450044 Msa0051350:intron 45.0%
!! TTTTGGCTGGTTGTATGGGA+GGG + chr1_2:5450174-5450193 None:intergenic 45.0%
!! GGTCTTTTGGCTGGTTGTAT+GGG + chr1_2:5450178-5450197 None:intergenic 45.0%
!! TGGTCTTTTGGCTGGTTGTA+TGG + chr1_2:5450179-5450198 None:intergenic 45.0%
!! AGACTTCTTGGTCTTTTGGC+TGG + chr1_2:5450187-5450206 None:intergenic 45.0%
TTAATGAAGTTACGCCTGGC+CGG - chr1_2:5450208-5450227 Msa0051350:intron 45.0%
TGGCGAGAGAGCAATTGATT+GGG - chr1_2:5450269-5450288 Msa0051350:intron 45.0%
! TGATTGGGTGGCTTGTAACA+AGG - chr1_2:5450284-5450303 Msa0051350:intron 45.0%
GCAGTTCACTACTCCAAGTT+TGG + chr1_2:5450612-5450631 None:intergenic 45.0%
GCTTATTCCCTTTGTCACTC+AGG + chr1_2:5450817-5450836 None:intergenic 45.0%
!! TGGAGAGATAGAGGGTATCA+TGG - chr1_2:5450947-5450966 Msa0051350:intron 45.0%
GCCATTCCTTTCCACTAATC+CGG + chr1_2:5451165-5451184 None:intergenic 45.0%
TGGAAAGGAATGGCAAGGTT+CGG - chr1_2:5451171-5451190 Msa0051350:intron 45.0%
AAGAAACTTGTCTCTGCGTG+TGG - chr1_2:5451275-5451294 Msa0051350:intron 45.0%
AGAAACTTGTCTCTGCGTGT+GGG - chr1_2:5451276-5451295 Msa0051350:intron 45.0%
AGGAGAGATCAGTAGTGAGA+TGG - chr1_2:5451357-5451376 Msa0051350:intron 45.0%
GGAGAGATCAGTAGTGAGAT+GGG - chr1_2:5451358-5451377 Msa0051350:intron 45.0%
GAGAGATCAGTAGTGAGATG+GGG - chr1_2:5451359-5451378 Msa0051350:intron 45.0%
! CAGACTTTATCCCGCTGTTT+TGG + chr1_2:5451415-5451434 None:intergenic 45.0%
CAAAACAGCGGGATAAAGTC+TGG - chr1_2:5451413-5451432 Msa0051350:intron 45.0%
GCGGGATAAAGTCTGGTTAA+TGG - chr1_2:5451420-5451439 Msa0051350:intron 45.0%
GGTTGCTTAAGGGTTTCCTT+TGG - chr1_2:5451441-5451460 Msa0051350:intron 45.0%
ACAGCATCACTACGAGACTT+CGG + chr1_2:5451469-5451488 None:intergenic 45.0%
! CATTGGTAATCAAGCGGAGA+TGG - chr1_2:5451498-5451517 Msa0051350:intron 45.0%
AACTGTTCAATTCCTCGCAG+AGG - chr1_2:5451844-5451863 Msa0051350:intron 45.0%
CAGCCAACCTGAATAGAAGT+GGG - chr1_2:5451867-5451886 Msa0051350:intron 45.0%
CTTCCCACTTCTATTCAGGT+TGG + chr1_2:5451873-5451892 None:intergenic 45.0%
CAACCTGAATAGAAGTGGGA+AGG - chr1_2:5451871-5451890 Msa0051350:intron 45.0%
AATAGAAGTGGGAAGGCAGA+TGG - chr1_2:5451878-5451897 Msa0051350:intron 45.0%
GATGGCCATGATATTCTCAG+TGG - chr1_2:5451896-5451915 Msa0051350:intron 45.0%
TGTTGAACGTCCACGTATTC+TGG - chr1_2:5452018-5452037 Msa0051350:intron 45.0%
GAACAACTCACCAGAATACG+TGG + chr1_2:5452031-5452050 None:intergenic 45.0%
TACCTAGTGAAGATGGTGCT+TGG - chr1_2:5452375-5452394 Msa0051350:intron 45.0%
CGTGGCAATAGCCTAAAGAT+TGG - chr1_2:5452886-5452905 Msa0051350:intron 45.0%
!! AAAAGATGGGTTAGACTCCC+AGG - chr1_2:5452972-5452991 Msa0051350:intron 45.0%
AATCAGCTCAAAGTGCAGTG+CGG - chr1_2:5453080-5453099 Msa0051350:intron 45.0%
ACCGGATTTCTTTAACTCGG+AGG + chr1_2:5453160-5453179 None:intergenic 45.0%
!!! TATGGGCAGCTTTTGACTTG+GGG + chr1_2:5453218-5453237 None:intergenic 45.0%
TGCCCATAAAAAGTCGGGTA+TGG - chr1_2:5453230-5453249 Msa0051350:intron 45.0%
TCCTCTATTTGCCCAGTAGA+TGG - chr1_2:5453257-5453276 Msa0051350:intron 45.0%
ACCATCTACTGGGCAAATAG+AGG + chr1_2:5453261-5453280 None:intergenic 45.0%
AAACAAAGACAGCTGTACCG+AGG - chr1_2:5453503-5453522 Msa0051350:intron 45.0%
CTGTGGATCATACACTTTGG+TGG - chr1_2:5453666-5453685 Msa0051350:intron 45.0%
GTTACGCTTCGCAATTCAAG+AGG - chr1_2:5453828-5453847 Msa0051350:intron 45.0%
AACTCCGTCCCATATGTTCA+AGG - chr1_2:5453867-5453886 Msa0051350:intron 45.0%
ACTCCGTCCCATATGTTCAA+GGG - chr1_2:5453868-5453887 Msa0051350:intron 45.0%
TTCCCCTTGAACATATGGGA+CGG + chr1_2:5453874-5453893 None:intergenic 45.0%
!! TTCACACTTTTTGTGGCGGA+TGG - chr1_2:5453901-5453920 Msa0051350:intron 45.0%
! CAAGTTCGTATATCTGGGGT+TGG - chr1_2:5453999-5454018 Msa0051350:intron 45.0%
! TCGTATATCTGGGGTTGGAA+AGG - chr1_2:5454004-5454023 Msa0051350:intron 45.0%
! ATATCTGGGGTTGGAAAGGA+AGG - chr1_2:5454008-5454027 Msa0051350:intron 45.0%
ATGAACGTTGGCAGGTAGAT+GGG + chr1_2:5454079-5454098 None:intergenic 45.0%
TCACAAACATGAACGTTGGC+AGG + chr1_2:5454087-5454106 None:intergenic 45.0%
! TCAACATTTTGCGAGCCTAC+TGG + chr1_2:5454277-5454296 None:intergenic 45.0%
!! CACTCATGGAGGCTTTGAAA+CGG + chr1_2:5455025-5455044 None:intergenic 45.0%
! ACATTTTCTCGATGGCAGCA+AGG + chr1_2:5455080-5455099 None:intergenic 45.0%
TCTAAGGGACGAAAATGGCA+TGG + chr1_2:5455111-5455130 None:intergenic 45.0%
ACTTAGCAGTGATCACGAGT+AGG - chr1_2:5455300-5455319 Msa0051350:intron 45.0%
ACCCTTAATTGGAGTCAAGG+AGG - chr1_2:5455411-5455430 Msa0051350:intron 45.0%
! TCCTCGAGTGTAGTGCTATT+TGG - chr1_2:5455489-5455508 Msa0051350:intron 45.0%
TCCAAATAGCACTACACTCG+AGG + chr1_2:5455493-5455512 None:intergenic 45.0%
!! GCGTTTTAACACTCGACTAG+AGG - chr1_2:5455592-5455611 Msa0051350:intron 45.0%
! TTCCTCGTGAAGTGCTATCA+AGG - chr1_2:5456049-5456068 Msa0051350:intron 45.0%
ATCGGTGGTGCTCAGAAAAA+GGG + chr1_2:5456209-5456228 None:intergenic 45.0%
AATCGGTGGTGCTCAGAAAA+AGG + chr1_2:5456210-5456229 None:intergenic 45.0%
GTTTAGGGATATACTCCCTC+CGG - chr1_2:5456402-5456421 Msa0051350:three_prime_UTR 45.0%
TGAGGGAGGGACTATATAGT+TGG - chr1_2:5456647-5456666 Msa0051350:CDS 45.0%
AAGTGATAGTATAGGCCCTC+TGG - chr1_2:5456733-5456752 Msa0051350:CDS 45.0%
GAAAAAGGAGATTGTAGCGC+AGG - chr1_2:5456908-5456927 Msa0051350:CDS 45.0%
! GATTGTAGCGCAGGTTTTCA+TGG - chr1_2:5456917-5456936 Msa0051350:CDS 45.0%
GGCGCTTCCTAAAACATTCT+CGG - chr1_2:5457128-5457147 Msa0051350:intron 45.0%
CAACTCCACTAGGACCTTTA+AGG + chr1_2:5448138-5448157 None:intergenic 45.0%
AGGTGACACTGTTTACTTCG+TGG - chr1_2:5457233-5457252 Msa0051350:intron 45.0%
GACACTGTTTACTTCGTGGA+TGG - chr1_2:5457237-5457256 Msa0051350:intron 45.0%
CTGTTTACTTCGTGGATGGT+TGG - chr1_2:5457241-5457260 Msa0051350:intron 45.0%
GTGCTTCGCCTGAGAAATTT+CGG - chr1_2:5457499-5457518 Msa0051350:CDS 45.0%
GCTTAGGACCATTAAAGAGG+GGG + chr1_2:5457875-5457894 None:intergenic 45.0%
CGCTTAGGACCATTAAAGAG+GGG + chr1_2:5457876-5457895 None:intergenic 45.0%
CACGCTTAGGACCATTAAAG+AGG + chr1_2:5457878-5457897 None:intergenic 45.0%
CTCTTTAATGGTCCTAAGCG+TGG - chr1_2:5457876-5457895 Msa0051350:intron 45.0%
!! GGTGATTCGGTTATATGAGG+TGG - chr1_2:5458229-5458248 Msa0051350:intron 45.0%
GTTATATGAGGTGGGAGTTG+TGG - chr1_2:5458238-5458257 Msa0051350:intron 45.0%
CTGTGTAGAGGATTGCTCTT+TGG - chr1_2:5458321-5458340 Msa0051350:intron 45.0%
AGGATTGCTCTTTGGGTAGT+AGG - chr1_2:5458329-5458348 Msa0051350:intron 45.0%
GGATTGCTCTTTGGGTAGTA+GGG - chr1_2:5458330-5458349 Msa0051350:intron 45.0%
TGTCGGTGGTTCATGTGTTA+TGG - chr1_2:5458659-5458678 Msa0051350:CDS 45.0%
GCTTGAGAAACTGATCTGGT+TGG - chr1_2:5458767-5458786 Msa0051350:intron 45.0%
TATGTATGGAGGATGGAACC+TGG - chr1_2:5458827-5458846 Msa0051350:intron 45.0%
ATTACGTGTTCGCATCACTG+AGG - chr1_2:5459527-5459546 Msa0051350:intron 45.0%
CTCACAAGCAGAATGTTAGC+AGG + chr1_2:5459659-5459678 None:intergenic 45.0%
CAGTGTCAAGAACTCTGCAT+TGG + chr1_2:5460024-5460043 None:intergenic 45.0%
GTAACGTGTCTTTGTCTTGG+TGG + chr1_2:5461302-5461321 None:intergenic 45.0%
CATGGGAGGAAGAGATTTAC+TGG - chr1_2:5461407-5461426 Msa0051350:intron 45.0%
CAACTCCACTAGGACCTTTA+AGG + chr1_2:5448138-5448157 None:intergenic 45.0%
ATATCCCACACAACTCCACT+AGG + chr1_2:5461873-5461892 None:intergenic 45.0%
AGTGGAGTTGTGTGGGATAT+TGG - chr1_2:5461873-5461892 Msa0051350:intron 45.0%
GTGGAGTTGTGTGGGATATT+GGG - chr1_2:5461874-5461893 Msa0051350:intron 45.0%
GGACAAGCTCATACTGAACA+AGG - chr1_2:5448355-5448374 Msa0051350:intron 45.0%
CAAGCTCATACTGAACAAGG+GGG - chr1_2:5448358-5448377 Msa0051350:intron 45.0%
ACTGAACAAGGGGGTAACAA+AGG - chr1_2:5462092-5462111 Msa0051350:CDS 45.0%
TGCTTCCCCTAAGAAATGCA+TGG - chr1_2:5462277-5462296 Msa0051350:CDS 45.0%
GCATCAGCCATGCATTTCTT+AGG + chr1_2:5462287-5462306 None:intergenic 45.0%
! TTCTTAGTCCTTTTGCCGGT+TGG + chr1_2:5462347-5462366 None:intergenic 45.0%
!! CTTCTTAGTCTTGACAGCCA+CGG + chr1_2:5462387-5462406 None:intergenic 45.0%
!! CGAGAGAGCACTTGATTTGA+GGG - chr1_2:5462439-5462458 Msa0051350:CDS 45.0%
GCTTGAGAAACTGATCTGCT+CGG - chr1_2:5463167-5463186 Msa0051350:intron 45.0%
AGGCCGTTGCTATAGCTAAA+AGG - chr1_2:5463538-5463557 Msa0051350:intron 45.0%
GTCACATTCTATCTGCAGGA+TGG - chr1_2:5463574-5463593 Msa0051350:intron 45.0%
CATTCTATCTGCAGGATGGT+TGG - chr1_2:5463578-5463597 Msa0051350:intron 45.0%
!! TTGGCTTTTGTTCGTGCCAA+TGG - chr1_2:5463597-5463616 Msa0051350:intron 45.0%
TGTTCGTGCCAATGGCATAA+AGG - chr1_2:5463605-5463624 Msa0051350:intron 45.0%
! AGTGCTGAGGTTGGAAAAGA+TGG - chr1_2:5463681-5463700 Msa0051350:intron 45.0%
GTGCTGAGGTTGGAAAAGAT+GGG - chr1_2:5463682-5463701 Msa0051350:intron 45.0%
AACGTTAGCAGGTAGAAGGA+TGG + chr1_2:5463789-5463808 None:intergenic 45.0%
ACAGAACGTTAGCAGGTAGA+AGG + chr1_2:5463793-5463812 None:intergenic 45.0%
CTTACGAACAGAACGTTAGC+AGG + chr1_2:5463800-5463819 None:intergenic 45.0%
!! AAAAAATATAAATAGAAAAA+AGG + chr1_2:5448672-5448691 None:intergenic 5.0%
!! AAAAGATAAAAAAAAATAAA+AGG + chr1_2:5448706-5448725 None:intergenic 5.0%
!! ATAAAAAAATATAATAATCA+TGG + chr1_2:5449028-5449047 None:intergenic 5.0%
!!! ATTAATAATATTGATTTTAA+TGG - chr1_2:5455910-5455929 Msa0051350:intron 5.0%
!! TTTATTATATTAACAAAATA+TGG + chr1_2:5463019-5463038 None:intergenic 5.0%
GTCTTGCGTTCGAAAATGGG+AGG - chr1_2:5446594-5446613 Msa0051350:three_prime_UTR 50.0%
CAGGTGGAAGCAGCAAATCT+TGG - chr1_2:5446619-5446638 Msa0051350:three_prime_UTR 50.0%
GTGGGACAATGCAAGCAAGT+TGG + chr1_2:5446938-5446957 None:intergenic 50.0%
TTGCTTGCATTGTCCCACGT+TGG - chr1_2:5446940-5446959 Msa0051350:intron 50.0%
CATTGTCCCACGTTGGAACT+TGG - chr1_2:5446947-5446966 Msa0051350:intron 50.0%
! AAAACAAAAGGCACAGGGGG+GGG - chr1_2:5447319-5447338 Msa0051350:intron 50.0%
ATGAAGTGAGGGGTTCAGAG+AGG - chr1_2:5447429-5447448 Msa0051350:intron 50.0%
GTGACCCTTAAAGGTCCTAG+TGG - chr1_2:5448130-5448149 Msa0051350:intron 50.0%
AAGGTCCTAGTGGAGTTGTG+TGG - chr1_2:5448140-5448159 Msa0051350:intron 50.0%
GTGGAGTTGTGTGGAATGTC+GGG - chr1_2:5448149-5448168 Msa0051350:intron 50.0%
GTCAGTACCCCTTCTAATGG+CGG - chr1_2:5448418-5448437 Msa0051350:intron 50.0%
CAAGGCTCCCCCTTAGTTAA+AGG + chr1_2:5448736-5448755 None:intergenic 50.0%
CTTTAACTAAGGGGGAGCCT+TGG - chr1_2:5448734-5448753 Msa0051350:intron 50.0%
TTACACAAGAGGCTGTTCCC+AGG + chr1_2:5448809-5448828 None:intergenic 50.0%
CTAAAGGTCCTGCATACGCA+GGG + chr1_2:5448886-5448905 None:intergenic 50.0%
ACTAAAGGTCCTGCATACGC+AGG + chr1_2:5448887-5448906 None:intergenic 50.0%
TGCAGGACCTTTAGTGATCC+GGG - chr1_2:5448892-5448911 Msa0051350:intron 50.0%
AACACCACCGGGACCTTTAA+GGG + chr1_2:5449496-5449515 None:intergenic 50.0%
CTGTTTACTTCGTGGACGGT+TGG - chr1_2:5449550-5449569 Msa0051350:intron 50.0%
ACTAGGGGGTAGCAAAGCAA+AGG - chr1_2:5449731-5449750 Msa0051350:intron 50.0%
CAGTTTCCCTACCAACCAAC+CGG - chr1_2:5449963-5449982 Msa0051350:intron 50.0%
!! CCTTTTTCCGGTTGGTTGGT+AGG + chr1_2:5449973-5449992 None:intergenic 50.0%
CCTACCAACCAACCGGAAAA+AGG - chr1_2:5449970-5449989 Msa0051350:intron 50.0%
! TGCTCCTTTTTCCGGTTGGT+TGG + chr1_2:5449977-5449996 None:intergenic 50.0%
! CTCTTGCTCCTTTTTCCGGT+TGG + chr1_2:5449981-5450000 None:intergenic 50.0%
!! GTTGTTGGAGAGCACTTGAC+TGG - chr1_2:5450024-5450043 Msa0051350:intron 50.0%
!! CTTTTGGCTGGTTGTATGGG+AGG + chr1_2:5450175-5450194 None:intergenic 50.0%
CTGGCGAGAGAGCAATTGAT+TGG - chr1_2:5450268-5450287 Msa0051350:intron 50.0%
CGAGAGAGCAATTGATTGGG+TGG - chr1_2:5450272-5450291 Msa0051350:intron 50.0%
ACATGGGCCTGAGTGACAAA+GGG - chr1_2:5450807-5450826 Msa0051350:intron 50.0%
AGAGAGAATGAGAGGTGGCA+AGG - chr1_2:5450875-5450894 Msa0051350:intron 50.0%
TTTCCACTAATCCGGCAGGT+AGG + chr1_2:5451157-5451176 None:intergenic 50.0%
!! TACCTGCCGGATTAGTGGAA+AGG - chr1_2:5451156-5451175 Msa0051350:intron 50.0%
TTCCTTTCCACTAATCCGGC+AGG + chr1_2:5451161-5451180 None:intergenic 50.0%
!! GCCGGATTAGTGGAAAGGAA+TGG - chr1_2:5451161-5451180 Msa0051350:intron 50.0%
TGGAAACGCATGATCTGCTG+AGG + chr1_2:5451310-5451329 None:intergenic 50.0%
CAGTAGTGAGATGGGGCATA+TGG - chr1_2:5451366-5451385 Msa0051350:intron 50.0%
TGCTAGGAGGACCAAAACAG+CGG - chr1_2:5451401-5451420 Msa0051350:intron 50.0%
CTACGAGACTTCGGAACCAA+AGG + chr1_2:5451460-5451479 None:intergenic 50.0%
GCAGCCAACCTGAATAGAAG+TGG - chr1_2:5451866-5451885 Msa0051350:intron 50.0%
CTGCCTTCCCACTTCTATTC+AGG + chr1_2:5451877-5451896 None:intergenic 50.0%
TGCCAAGCACCATCTTCACT+AGG + chr1_2:5452380-5452399 None:intergenic 50.0%
TTCATCCCATTCCCTGTGCT+TGG - chr1_2:5452656-5452675 Msa0051350:intron 50.0%
GAATGCCAAGCACAGGGAAT+GGG + chr1_2:5452664-5452683 None:intergenic 50.0%
TGAATGCCAAGCACAGGGAA+TGG + chr1_2:5452665-5452684 None:intergenic 50.0%
CAGTGTGAATGCCAAGCACA+GGG + chr1_2:5452670-5452689 None:intergenic 50.0%
TCAGTGTGAATGCCAAGCAC+AGG + chr1_2:5452671-5452690 None:intergenic 50.0%
GCAAGTCACATTCTATGCGG+AGG - chr1_2:5452847-5452866 Msa0051350:intron 50.0%
GTCACATTCTATGCGGAGGA+TGG - chr1_2:5452851-5452870 Msa0051350:intron 50.0%
CGTGTTCGCATCAATGAGGT+TGG - chr1_2:5452949-5452968 Msa0051350:intron 50.0%
!!! ATGGGCAGCTTTTGACTTGG+GGG + chr1_2:5453217-5453236 None:intergenic 50.0%
!! TGATGATGGACTAAGCTCCC+AGG - chr1_2:5453537-5453556 Msa0051350:intron 50.0%
GTGCAGTAGAGAACTGGCAT+GGG + chr1_2:5453785-5453804 None:intergenic 50.0%
TGTGCAGTAGAGAACTGGCA+TGG + chr1_2:5453786-5453805 None:intergenic 50.0%
GGAGATGTGCAGTAGAGAAC+TGG + chr1_2:5453791-5453810 None:intergenic 50.0%
CTCCGTCCCATATGTTCAAG+GGG - chr1_2:5453869-5453888 Msa0051350:intron 50.0%
CATGAACGTTGGCAGGTAGA+TGG + chr1_2:5454080-5454099 None:intergenic 50.0%
CGTTTCAAAGCCTCCATGAG+TGG - chr1_2:5455023-5455042 Msa0051350:intron 50.0%
TGGATGCGGCTTGTGTCTAA+GGG + chr1_2:5455126-5455145 None:intergenic 50.0%
ATGGATGCGGCTTGTGTCTA+AGG + chr1_2:5455127-5455146 None:intergenic 50.0%
CACTTCAACATTCCTGCCTG+AGG - chr1_2:5455185-5455204 Msa0051350:intron 50.0%
GAACTCCACGTTGAAACCTC+AGG + chr1_2:5455204-5455223 None:intergenic 50.0%
! TGCCTTGATAGCACTTCACG+AGG + chr1_2:5456054-5456073 None:intergenic 50.0%
! TCGTGAAGTGCTATCAAGGC+AGG - chr1_2:5456053-5456072 Msa0051350:intron 50.0%
GGTGGGCAATTTAGTCCAGA+GGG + chr1_2:5456751-5456770 None:intergenic 50.0%
AGGTGGGCAATTTAGTCCAG+AGG + chr1_2:5456752-5456771 None:intergenic 50.0%
GTGACCCTTAAAGGTCCTAG+TGG - chr1_2:5448130-5448149 Msa0051350:intron 50.0%
AAGGTCCTAGTGGAGTTGTG+TGG - chr1_2:5448140-5448159 Msa0051350:intron 50.0%
! GCTCGCTTATTAGTCTGGAC+AGG + chr1_2:5457639-5457658 None:intergenic 50.0%
! TTGGGAGAGAGCGTGTAACA+AGG - chr1_2:5457683-5457702 Msa0051350:CDS 50.0%
GCGTGTAACAAGGAACACTC+AGG - chr1_2:5457693-5457712 Msa0051350:CDS 50.0%
TGAGGCCATGTCATCTGCTA+AGG + chr1_2:5458101-5458120 None:intergenic 50.0%
TGACATGGCCTCAGTGACAA+AGG - chr1_2:5458108-5458127 Msa0051350:intron 50.0%
GAGAGAATGATGAGGTGGCA+AGG - chr1_2:5458178-5458197 Msa0051350:intron 50.0%
AGAATGATGAGGTGGCAAGG+AGG - chr1_2:5458181-5458200 Msa0051350:intron 50.0%
GAATGATGAGGTGGCAAGGA+GGG - chr1_2:5458182-5458201 Msa0051350:intron 50.0%
!! TGGAGAGATGGAGGGTATCA+TGG - chr1_2:5458258-5458277 Msa0051350:intron 50.0%
AGGATGGAACCTGGTAAGCA+TGG - chr1_2:5458836-5458855 Msa0051350:intron 50.0%
GTCACACTCTATGTGCAGGA+TGG - chr1_2:5459433-5459452 Msa0051350:intron 50.0%
AAAAGAAGGGCTAGACTGCC+AGG - chr1_2:5459554-5459573 Msa0051350:intron 50.0%
CAAGACCTTCCTTTCCAACC+TGG + chr1_2:5454016-5454035 None:intergenic 50.0%
! AGAAGGCGCGTCTTCAAGTA+TGG + chr1_2:5459837-5459856 None:intergenic 50.0%
TGCAGAGTTCTTGACACTGC+TGG - chr1_2:5460025-5460044 Msa0051350:intron 50.0%
GCAGAGTTCTTGACACTGCT+GGG - chr1_2:5460026-5460045 Msa0051350:intron 50.0%
TGGGAGGTGGAAGAAGATCA+TGG - chr1_2:5461389-5461408 Msa0051350:intron 50.0%
GGGAGGTGGAAGAAGATCAT+GGG - chr1_2:5461390-5461409 Msa0051350:intron 50.0%
AGGTGGAAGAAGATCATGGG+AGG - chr1_2:5461393-5461412 Msa0051350:intron 50.0%
GTGACCCTTAAAGGTCCTAG+TGG - chr1_2:5448130-5448149 Msa0051350:intron 50.0%
AAGGTCCTAGTGGAGTTGTG+TGG - chr1_2:5448140-5448159 Msa0051350:intron 50.0%
AGGTCCTAGTGGAGTTGTGT+GGG - chr1_2:5448141-5448160 Msa0051350:intron 50.0%
CTGTTTACTTCACGGACGGT+TGG - chr1_2:5461916-5461935 Msa0051350:intron 50.0%
GAAGCCTGTTAAAGAAGCCG+TGG - chr1_2:5462367-5462386 Msa0051350:CDS 50.0%
ACAGCCACGGCTTCTTTAAC+AGG + chr1_2:5462374-5462393 None:intergenic 50.0%
GCTGTCAAGACTAAGAAGCG+AGG - chr1_2:5462389-5462408 Msa0051350:CDS 50.0%
!! GCGAGAGAGCACTTGATTTG+AGG - chr1_2:5462438-5462457 Msa0051350:CDS 50.0%
GGGAGAACGTTGGACTGTTA+AGG - chr1_2:5463518-5463537 Msa0051350:intron 50.0%
CGTGCCAATGGCATAAAGGT+TGG - chr1_2:5463609-5463628 Msa0051350:intron 50.0%
GTTATGTGTTCGCAGTGCTG+AGG - chr1_2:5463668-5463687 Msa0051350:intron 50.0%
!! AAAAGATGGGCTAGACTGCC+AGG - chr1_2:5463695-5463714 Msa0051350:intron 50.0%
CAAGACCTTCCTTTCCAACC+TGG + chr1_2:5454016-5454035 None:intergenic 50.0%
CGTTCGAAAATGGGAGGAGC+AGG - chr1_2:5446600-5446619 Msa0051350:three_prime_UTR 55.0%
TCGAAAATGGGAGGAGCAGG+TGG - chr1_2:5446603-5446622 Msa0051350:three_prime_UTR 55.0%
!! AGATGTGGTGTCGCCTCTCA+TGG + chr1_2:5447135-5447154 None:intergenic 55.0%
! AAACAAAAGGCACAGGGGGG+GGG - chr1_2:5447320-5447339 Msa0051350:intron 55.0%
GGGGGAGTGAAATCTTGCTC+TGG - chr1_2:5447346-5447365 Msa0051350:intron 55.0%
TGGAAGTCTGTTCATGCGCG+AGG - chr1_2:5447366-5447385 Msa0051350:intron 55.0%
ACAACTTTCCCGTTGCGCCA+AGG + chr1_2:5448754-5448773 None:intergenic 55.0%
CAACACCACCGGGACCTTTA+AGG + chr1_2:5449497-5449516 None:intergenic 55.0%
!! TTGGAGAGCACTTGACTGGG+TGG - chr1_2:5450028-5450047 Msa0051350:intron 55.0%
GTCTTCCCCGCTTCTTACTC+CGG + chr1_2:5450230-5450249 None:intergenic 55.0%
CAGGCCCATGTCATCTGCTA+AGG + chr1_2:5450798-5450817 None:intergenic 55.0%
GACATGGGCCTGAGTGACAA+AGG - chr1_2:5450806-5450825 Msa0051350:intron 55.0%
! AGTCCTACCTGCCGGATTAG+TGG - chr1_2:5451151-5451170 Msa0051350:intron 55.0%
GTCTCTGCGTGTGGGTAGAT+TGG - chr1_2:5451284-5451303 Msa0051350:intron 55.0%
! ATGGCCTTGCAGAGCTTGCT+AGG - chr1_2:5451385-5451404 Msa0051350:intron 55.0%
TCCTCCTAGCAAGCTCTGCA+AGG + chr1_2:5451392-5451411 None:intergenic 55.0%
GCTAGGAGGACCAAAACAGC+GGG - chr1_2:5451402-5451421 Msa0051350:intron 55.0%
!! GATGGGTTAGACTCCCAGGT+TGG - chr1_2:5452976-5452995 Msa0051350:intron 55.0%
TCCTGCCTGAGGTTTCAACG+TGG - chr1_2:5455196-5455215 Msa0051350:intron 55.0%
TCCACGTTGAAACCTCAGGC+AGG + chr1_2:5455200-5455219 None:intergenic 55.0%
AGGTGGGAGTTGTGGAGAGA+TGG - chr1_2:5458246-5458265 Msa0051350:intron 55.0%
TGGGAGTTGTGGAGAGATGG+AGG - chr1_2:5458249-5458268 Msa0051350:intron 55.0%
GGGAGTTGTGGAGAGATGGA+GGG - chr1_2:5458250-5458269 Msa0051350:intron 55.0%
TTGACAGTGCTGCCTCTGTG+TGG + chr1_2:5458554-5458573 None:intergenic 55.0%
CGTGTTCGCATCACTGAGGT+TGG - chr1_2:5459531-5459550 Msa0051350:intron 55.0%
! GCTAGACTGCCAGGTTGGAA+AGG - chr1_2:5459563-5459582 Msa0051350:intron 55.0%
! GACTGCCAGGTTGGAAAGGA+AGG - chr1_2:5459567-5459586 Msa0051350:intron 55.0%
!! TCTGCATTGGTTGAAGCCGC+GGG + chr1_2:5460011-5460030 None:intergenic 55.0%
!! CTCTGCATTGGTTGAAGCCG+CGG + chr1_2:5460012-5460031 None:intergenic 55.0%
CAGTTTCCCTTCCAGCCAAC+CGG - chr1_2:5462329-5462348 Msa0051350:CDS 55.0%
!! CTTTTGCCGGTTGGCTGGAA+GGG + chr1_2:5462338-5462357 None:intergenic 55.0%
!! TAGTCCTTTTGCCGGTTGGC+TGG + chr1_2:5462343-5462362 None:intergenic 55.0%
TGACACAGGCGAGTCGTATC+TGG - chr1_2:5462673-5462692 Msa0051350:intron 55.0%
TTGACAGTGCTGCCTCTGTG+TGG + chr1_2:5458554-5458573 None:intergenic 55.0%
! TGTGTTCGCAGTGCTGAGGT+TGG - chr1_2:5463672-5463691 Msa0051350:intron 55.0%
! GCTAGACTGCCAGGTTGGAA+AGG - chr1_2:5459563-5459582 Msa0051350:intron 55.0%
! GACTGCCAGGTTGGAAAGGA+AGG - chr1_2:5459567-5459586 Msa0051350:intron 55.0%
!! GTTGGGGATTTTGGGGGGTG+CGG - chr1_2:5447080-5447099 Msa0051350:intron 60.0%
!! TTGGGGATTTTGGGGGGTGC+GGG - chr1_2:5447081-5447100 Msa0051350:intron 60.0%
! GGTGTCGCCTCTCATGGTCA+TGG + chr1_2:5447129-5447148 None:intergenic 60.0%
! AACAAAAGGCACAGGGGGGG+GGG - chr1_2:5447321-5447340 Msa0051350:intron 60.0%
CGGCTCTCTCCCCTAAACGT+AGG - chr1_2:5447635-5447654 Msa0051350:intron 60.0%
! GGGAAGGGGTCCCACCATTT+TGG + chr1_2:5448860-5448879 None:intergenic 60.0%
CATACGCAGGGTCTGGGAAG+GGG + chr1_2:5448874-5448893 None:intergenic 60.0%
GCATACGCAGGGTCTGGGAA+GGG + chr1_2:5448875-5448894 None:intergenic 60.0%
TGCATACGCAGGGTCTGGGA+AGG + chr1_2:5448876-5448895 None:intergenic 60.0%
TTCCCAGACCCTGCGTATGC+AGG - chr1_2:5448875-5448894 Msa0051350:intron 60.0%
GTCCTGCATACGCAGGGTCT+GGG + chr1_2:5448880-5448899 None:intergenic 60.0%
AGGGCAGCCCGGATCACTAA+AGG + chr1_2:5448902-5448921 None:intergenic 60.0%
GTGACCCTTAAAGGTCCCGG+TGG - chr1_2:5449489-5449508 Msa0051350:intron 60.0%
!! AAGGTCCCGGTGGTGTTGCA+TGG - chr1_2:5449499-5449518 Msa0051350:intron 60.0%
!! GCCTTGCAGAGCTTGCTAGG+AGG - chr1_2:5451388-5451407 Msa0051350:intron 60.0%
CTCCATGAGTGGCCGTGCTT+CGG - chr1_2:5455034-5455053 Msa0051350:intron 60.0%
CAACGACTGACGCCGAAGCA+CGG + chr1_2:5455049-5455068 None:intergenic 60.0%
GCTTCGGCGTCAGTCGTTGT+AGG - chr1_2:5455050-5455069 Msa0051350:intron 60.0%
GAAGGGCTAGACTGCCAGGT+TGG - chr1_2:5459558-5459577 Msa0051350:intron 60.0%
AATATACTCCCTCCGGCCCG+CGG - chr1_2:5459992-5460011 Msa0051350:intron 60.0%
!! CCTTTTGCCGGTTGGCTGGA+AGG + chr1_2:5462339-5462358 None:intergenic 60.0%
CCTTCCAGCCAACCGGCAAA+AGG - chr1_2:5462336-5462355 Msa0051350:CDS 60.0%
!! GATGGGCTAGACTGCCAGGT+TGG - chr1_2:5463699-5463718 Msa0051350:intron 60.0%
! GGGGGGTGCGGGAGAAACAA+CGG - chr1_2:5447092-5447111 Msa0051350:intron 65.0%
! GGGGGTGCGGGAGAAACAAC+GGG - chr1_2:5447093-5447112 Msa0051350:intron 65.0%
! ACAAAAGGCACAGGGGGGGG+GGG - chr1_2:5447322-5447341 Msa0051350:intron 65.0%
AAGGGGGAGCCTTGGCGCAA+CGG - chr1_2:5448742-5448761 Msa0051350:intron 65.0%
GGTCCTGCATACGCAGGGTC+TGG + chr1_2:5448881-5448900 None:intergenic 65.0%
CGCCTGGCCGGAGTAAGAAG+CGG - chr1_2:5450220-5450239 Msa0051350:intron 65.0%
GCCTGGCCGGAGTAAGAAGC+GGG - chr1_2:5450221-5450240 Msa0051350:intron 65.0%
CCTGGCCGGAGTAAGAAGCG+GGG - chr1_2:5450222-5450241 Msa0051350:intron 65.0%
!! TCAGGTTGGCTGCCTCTGCG+AGG + chr1_2:5451859-5451878 None:intergenic 65.0%
CGAAGCACGGCCACTCATGG+AGG + chr1_2:5455036-5455055 None:intergenic 65.0%
! CATTGGTTGAAGCCGCGGGC+CGG + chr1_2:5460007-5460026 None:intergenic 65.0%
! CAAAAGGCACAGGGGGGGGG+GGG - chr1_2:5447323-5447342 Msa0051350:intron 70.0%
! AAAAGGCACAGGGGGGGGGG+GGG - chr1_2:5447324-5447343 Msa0051350:intron 70.0%
AGGGGGAGCCTTGGCGCAAC+GGG - chr1_2:5448743-5448762 Msa0051350:intron 70.0%
CCCCGCTTCTTACTCCGGCC+AGG + chr1_2:5450225-5450244 None:intergenic 70.0%
CGCCGAAGCACGGCCACTCA+TGG + chr1_2:5455039-5455058 None:intergenic 70.0%
! AAAGGCACAGGGGGGGGGGG+GGG - chr1_2:5447325-5447344 Msa0051350:intron 75.0%
GGTTGAAGCCGCGGGCCGGA+GGG + chr1_2:5460003-5460022 None:intergenic 75.0%
TGGTTGAAGCCGCGGGCCGG+AGG + chr1_2:5460004-5460023 None:intergenic 75.0%
! AAGGCACAGGGGGGGGGGGG+GGG - chr1_2:5447326-5447345 Msa0051350:intron 80.0%
! AGGCACAGGGGGGGGGGGGG+GGG - chr1_2:5447327-5447346 Msa0051350:intron 85.0%
! GGCACAGGGGGGGGGGGGGG+GGG - chr1_2:5447328-5447347 Msa0051350:intron 90.0%
Chromosome Type Strat End Strand Name
chr1_2 gene 5446444 5464099 5446444 ID=Msa0051350;Name=Msa0051350
chr1_2 mRNA 5446444 5464099 5446444 ID=Msa0051350-mRNA-1;Parent=Msa0051350;Name=Msa0051350-mRNA-1;_AED=0.41;_eAED=0.41;_QI=165|0.87|0.77|1|0.87|0.77|9|363|846
chr1_2 exon 5446444 5446647 5446444 ID=Msa0051350-mRNA-1:exon:1631;Parent=Msa0051350-mRNA-1
chr1_2 exon 5456320 5456766 5456320 ID=Msa0051350-mRNA-1:exon:1630;Parent=Msa0051350-mRNA-1
chr1_2 exon 5456859 5457032 5456859 ID=Msa0051350-mRNA-1:exon:1629;Parent=Msa0051350-mRNA-1
chr1_2 exon 5457292 5457813 5457292 ID=Msa0051350-mRNA-1:exon:1628;Parent=Msa0051350-mRNA-1
chr1_2 exon 5458504 5458679 5458504 ID=Msa0051350-mRNA-1:exon:1627;Parent=Msa0051350-mRNA-1
chr1_2 exon 5460228 5460386 5460228 ID=Msa0051350-mRNA-1:exon:1626;Parent=Msa0051350-mRNA-1
chr1_2 exon 5460472 5461105 5460472 ID=Msa0051350-mRNA-1:exon:1625;Parent=Msa0051350-mRNA-1
chr1_2 exon 5461994 5462464 5461994 ID=Msa0051350-mRNA-1:exon:1624;Parent=Msa0051350-mRNA-1
chr1_2 exon 5463818 5464099 5463818 ID=Msa0051350-mRNA-1:exon:1623;Parent=Msa0051350-mRNA-1
chr1_2 five_prime_UTR 5463935 5464099 5463935 ID=Msa0051350-mRNA-1:five_prime_utr;Parent=Msa0051350-mRNA-1
chr1_2 CDS 5463818 5463934 5463818 ID=Msa0051350-mRNA-1:cds;Parent=Msa0051350-mRNA-1
chr1_2 CDS 5461994 5462464 5461994 ID=Msa0051350-mRNA-1:cds;Parent=Msa0051350-mRNA-1
chr1_2 CDS 5460472 5461105 5460472 ID=Msa0051350-mRNA-1:cds;Parent=Msa0051350-mRNA-1
chr1_2 CDS 5460228 5460386 5460228 ID=Msa0051350-mRNA-1:cds;Parent=Msa0051350-mRNA-1
chr1_2 CDS 5458504 5458679 5458504 ID=Msa0051350-mRNA-1:cds;Parent=Msa0051350-mRNA-1
chr1_2 CDS 5457292 5457813 5457292 ID=Msa0051350-mRNA-1:cds;Parent=Msa0051350-mRNA-1
chr1_2 CDS 5456859 5457032 5456859 ID=Msa0051350-mRNA-1:cds;Parent=Msa0051350-mRNA-1
chr1_2 CDS 5456479 5456766 5456479 ID=Msa0051350-mRNA-1:cds;Parent=Msa0051350-mRNA-1
chr1_2 three_prime_UTR 5456320 5456478 5456320 ID=Msa0051350-mRNA-1:three_prime_utr;Parent=Msa0051350-mRNA-1
chr1_2 three_prime_UTR 5446444 5446647 5446444 ID=Msa0051350-mRNA-1:three_prime_utr;Parent=Msa0051350-mRNA-1
Gene Sequence

>Msa0051350

ATGGGAGGAGCAGGTGGAAGCAGCAAATCTTGGGAGAAAGAGATTTACTGGACCCATTTTCAGTTCATTCATTTCATCCAATTTCTTCAAACCACCACCGATTTTCAACACCAACTTGCCCTTCCCAAAACATTTTCAGACAATTTAAAGAAGAAGTTGCCAGACAATGTGACCCTTAAAGGTCCTAGTGGAGTTGTGTGGAATGTCGGGCTGACAGCTAGAGATGATACCATTTACTTCACAAATGGATGGCAAAGATTCGTGAAAGATCACTCTTTGAAAGAGAATGATTTCCTTGTCTTTAAGTACAATGGGGAATCACTCTTTGAAGTTTTAATCTTTCATGGAGATAGTTTCTGTGAGAAGGCAGCTTCTTATTTTGTTGGAAAATGTGGACAAGCTCATACTGAACAAGGGTGTAACAAGGGAAAAAGCTCCAATAATTCTGTTGAAGAAGTCAGTACCCCTTCTAATGGCGGTGTTGAATGCAGTTCGCCTGAAAAATCATGGGAGGAAGACATTTACTGGACCCATTTTCAGTTCATCCATTTCACCCAACTTCTTCCCAAAGATTTTAAGCAACAACTTGCACTTCCTAAAACATTTTCAGACAATTTAAATAAGAAGTTGCCAGAAAATGTGACCCTTAAAGGTCCCGGTGGTGTTGCATGGAAAATAGGGCTCATAACTAGAGACGATACTGTTTACTTCGTGGACGGTTGGCAACAATTCGTGAACGATCACTCTTTGAAAGATAATGATTTCCTTGTCTTTAATTACAATGGTGAATCACACTTTGATGTTTTAATCTTTGATGGAGAATGCTTCTGTGAGAAAGAAGCTTCTTATTTTGTCGGAAAATGCGGCCATACTCAAACTGAACTAGGGGGTAGCAAAGCAAAGGAAACAAACAATTCTATTGAAGAAGTCAATACTGCTTCTAATGGTGGTGTTGAATGTGGTTTATATGAGAAATTTCAGGATCTTAACAATATAGGAACACCATTATCTGTACCTGTTGAAACTACCAATGAAAAGACTTTTAATGCTGGTGTCAAATCTGATTCCCCTGAGCAGTTCATAGCTGATACAGTCACTAAGACCACAGCTATACAGTTTCCCTACCAACCAACCGGAAAAAGGAGCAAGAGAAGATCATCGACATCAGCTAATTGTTGTTGGAGAGCACTTGACTGGGTGGCTTATAACAAGCAACACTCAGTCACTATAGCGGTTCCCTCCCATACAACCAGCCAAAAGACCAAGAAGTCTGTTAATGAAGTTACGCCTGGCCGGAGTAAGAAGCGGGGAAGACAAGCAAAAACAGCTACTTCTGGCGAGAGAGCAATTGATTGGGTGGCTTGTAACAAGGAAAACTCAGAGGCAGCCAACCTGAATAGAAGTGGGAAGGCAGATGGCCATGATATTCTCAGTGGAGCTTCACTGTCTAAGTTATCACCACATGATGAGAAAGAGATAGCCCAATCATTTACCTCCTCTTTTCCATATTTTGTTAAAATAATGAAAACGTTCAATGTTGAACGTCCACGTATTCTGAATATTCCATATGAATTTTCGAAGGATCATCTTCCAAACTGCAAGATAAAGATTATTCTTCATAATTTGAAGGGAGAACAGTGGACCGTCAATTCTGTTCCTAGAACTAGATTGCATGCAAGTCACATTCTATGCGGAGGATGGTTGAATTTTGTTCGTGGCAATAGCCTAAAGATTGGAGATGTCTGTATTTTCGAACTTATAGGTGAGTGTGAATTACGTGTTCGCATCAATGAGGTTGGAAAAGATGGGTTAGACTCCCAGGTTGGAAAACTAGCTTGTAGTATGCTTAGTGCAAGACAGGATGTCGCTAGCCATAAGACTTCCAGATTTATGCCGAAGAAACATAAAATCAGCTCAAAGTGCAGTGCGGAAGTTGATCTATTAGATAAAAAGTTGTCAGAGATATGTCAAGAAGCTGCTTTATCCTCCGAGTTAAAGAAATCCGGTAGAGCTTCAAATACTTCGAAGAAGGCAGGGCTTTCCCCCAAGTCAAAAGCTGCCCATAAAAAGTCGGGTATGACAGCTGTACCGAGGAAACACCATGTTGATGATGGACTAAGCTCCCAGGCTAATGATAGTTTGAAAATGTTGTTTGCACTCGACGAACAAAGAGTAGCTGAAGCTTTCACTTCCCCATTTCCTTATTTTGTGAAAATCATGAAGAAGTTCAATGTCTGTGGATCATACACTTTGAAAATCCCATGCCAGTTCTCTACTGCACATCTCCCTGCTTGCAATACAGAAGTTACGCTTCGCAATTCAAGAGGCAAATGTTGGACTGTGAACTCCGTCCCATATGTTCAAGGGGAAACAACTATTCACACTTTTTGTGGCGGATGGAATGCCTTTGTTCGTGATAATGACATCAATTTTGGTGACACTTGTATTTTTGAGCTCGTTTCTGATTATGTGATGCAAGTTCGTATATCTGGGGTTGGAAAGGAAGGTCTTGATCATCAAAATGGGAATGTGAAACAATAG
Protein sequence

>Msa0051350

MGGAGGSSKSWEKEIYWTHFQFIHFIQFLQTTTDFQHQLALPKTFSDNLKKKLPDNVTLKGPSGVVWNVGLTARDDTIYFTNGWQRFVKDHSLKENDFLVFKYNGESLFEVLIFHGDSFCEKAASYFVGKCGQAHTEQGCNKGKSSNNSVEEVSTPSNGGVECSSPEKSWEEDIYWTHFQFIHFTQLLPKDFKQQLALPKTFSDNLNKKLPENVTLKGPGGVAWKIGLITRDDTVYFVDGWQQFVNDHSLKDNDFLVFNYNGESHFDVLIFDGECFCEKEASYFVGKCGHTQTELGGSKAKETNNSIEEVNTASNGGVECGLYEKFQDLNNIGTPLSVPVETTNEKTFNAGVKSDSPEQFIADTVTKTTAIQFPYQPTGKRSKRRSSTSANCCWRALDWVAYNKQHSVTIAVPSHTTSQKTKKSVNEVTPGRSKKRGRQAKTATSGERAIDWVACNKENSEAANLNRSGKADGHDILSGASLSKLSPHDEKEIAQSFTSSFPYFVKIMKTFNVERPRILNIPYEFSKDHLPNCKIKIILHNLKGEQWTVNSVPRTRLHASHILCGGWLNFVRGNSLKIGDVCIFELIGECELRVRINEVGKDGLDSQVGKLACSMLSARQDVASHKTSRFMPKKHKISSKCSAEVDLLDKKLSEICQEAALSSELKKSGRASNTSKKAGLSPKSKAAHKKSGMTAVPRKHHVDDGLSSQANDSLKMLFALDEQRVAEAFTSPFPYFVKIMKKFNVCGSYTLKIPCQFSTAHLPACNTEVTLRNSRGKCWTVNSVPYVQGETTIHTFCGGWNAFVRDNDINFGDTCIFELVSDYVMQVRISGVGKEGLDHQNGNVKQ*