AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0051360

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0051360 MtrunA17_Chr1g0154041 95.270 592 22 1 1 592 1 586 0.0 1176
Msa0051360 MtrunA17_Chr1g0154041 46.067 356 141 8 720 1039 15 355 3.48e-81 276
Msa0051360 MtrunA17_Chr1g0154041 54.676 139 63 0 222 360 451 589 1.32e-41 162
Msa0051360 MtrunA17_Chr1g0154041 27.083 576 375 17 494 1039 24 584 6.86e-36 145
Msa0051360 MtrunA17_Chr1g0154041 33.636 110 61 2 584 682 7 115 3.13e-11 67.4
Msa0051360 MtrunA17_Chr1g0154071 87.821 468 31 3 592 1043 38 495 0.0 818
Msa0051360 MtrunA17_Chr1g0154071 47.006 334 159 5 29 355 169 491 2.80e-81 273
Msa0051360 MtrunA17_Chr1g0154071 70.866 127 36 1 709 834 16 142 6.16e-52 190
Msa0051360 MtrunA17_Chr1g0154071 41.702 235 99 6 497 696 39 270 1.45e-42 163
Msa0051360 MtrunA17_Chr1g0154071 48.837 129 66 0 439 567 345 473 6.62e-32 131
Msa0051360 MtrunA17_Chr1g0154101 57.218 568 118 6 596 1039 40 606 0.0 608
Msa0051360 MtrunA17_Chr1g0154101 74.805 385 85 3 209 592 460 833 0.0 571
Msa0051360 MtrunA17_Chr1g0154101 65.000 160 52 2 696 853 2 159 2.40e-56 210
Msa0051360 MtrunA17_Chr1g0154101 33.133 332 174 9 47 362 539 838 4.93e-39 157
Msa0051360 MtrunA17_Chr1g0154101 31.944 360 176 10 718 1039 503 831 1.10e-34 143
Msa0051360 MtrunA17_Chr1g0154101 30.220 182 97 5 15 167 183 363 1.73e-15 81.6
Msa0051360 MtrunA17_Chr1g0154101 36.893 103 63 2 15 115 24 126 7.11e-14 76.3
Msa0051360 MtrunA17_Chr1g0154131 63.420 462 120 7 596 1037 40 472 0.0 569
Msa0051360 MtrunA17_Chr1g0154131 44.012 334 125 9 27 353 194 472 4.78e-72 247
Msa0051360 MtrunA17_Chr1g0154131 67.296 159 50 2 696 853 2 159 5.18e-60 213
Msa0051360 MtrunA17_Chr1g0154131 39.181 171 93 2 422 592 319 478 1.05e-31 130
Msa0051360 MtrunA17_Chr1g0154131 35.644 101 64 1 16 115 26 126 9.19e-14 75.1
Msa0051360 MtrunA17_Chr1g0154211 55.968 377 120 6 707 1040 9 382 8.61e-135 412
Msa0051360 MtrunA17_Chr1g0154211 41.555 373 185 8 15 361 22 387 8.10e-78 260
Msa0051360 MtrunA17_Chr1g0154211 64.844 128 26 1 596 704 37 164 8.52e-46 170
Msa0051360 MtrunA17_Chr1g0154211 41.935 155 86 1 426 580 227 377 6.49e-34 135
Msa0051360 MtrunA17_Chr1g0154111 55.376 372 123 9 705 1043 10 371 4.66e-118 375
Msa0051360 MtrunA17_Chr1g0154111 49.296 284 124 7 426 706 212 478 4.10e-73 254
Msa0051360 MtrunA17_Chr1g0154111 40.730 356 185 8 17 359 26 368 4.63e-68 239
Msa0051360 MtrunA17_Chr1g0154111 64.662 133 29 1 596 710 41 173 7.20e-47 178
Msa0051360 MtrunA17_Chr1g0154111 53.293 167 63 6 734 885 368 534 4.90e-36 145
Msa0051360 MtrunA17_Chr1g0154191 55.307 358 134 6 705 1039 6 360 1.51e-116 363
Msa0051360 MtrunA17_Chr1g0154191 33.962 371 205 8 17 367 22 372 2.24e-56 199
Msa0051360 MtrunA17_Chr1g0154191 64.444 135 29 1 596 711 37 171 6.04e-48 175
Msa0051360 MtrunA17_Chr1g0154191 37.700 313 152 9 293 577 56 353 9.56e-48 175
Msa0051360 MtrunA17_Chr1g0154171 55.524 353 125 8 707 1039 9 349 1.18e-112 353
Msa0051360 MtrunA17_Chr1g0154171 35.655 359 196 9 15 362 22 356 8.78e-54 192
Msa0051360 MtrunA17_Chr1g0154171 37.719 342 172 12 252 574 20 339 1.60e-48 177
Msa0051360 MtrunA17_Chr1g0154171 65.891 129 31 1 596 711 37 165 7.35e-48 175
Msa0051360 MtrunA17_Chr1g0154161 54.491 334 113 5 707 1038 16 312 5.31e-104 328
Msa0051360 MtrunA17_Chr1g0154161 35.613 351 164 8 15 362 29 320 1.12e-52 187
Msa0051360 MtrunA17_Chr1g0154161 38.272 324 152 11 252 574 27 303 1.25e-50 181
Msa0051360 MtrunA17_Chr1g0154161 80.412 97 19 0 596 692 45 141 9.23e-47 170
Msa0051360 MtrunA17_Chr1g0154151 53.846 325 107 9 734 1039 19 319 5.38e-91 294
Msa0051360 MtrunA17_Chr1g0154151 37.464 347 174 9 31 367 20 333 2.24e-56 198
Msa0051360 MtrunA17_Chr1g0154151 57.480 127 46 1 593 711 16 142 2.15e-41 155
Msa0051360 MtrunA17_Chr1g0154151 34.951 309 176 7 272 574 20 309 1.03e-39 150
Msa0051360 MtrunA17_Chr1g0154251 41.406 384 151 11 707 1019 13 393 1.24e-71 247
Msa0051360 MtrunA17_Chr1g0154251 73.196 97 26 0 596 692 41 137 1.14e-41 160
Msa0051360 MtrunA17_Chr1g0154251 35.294 102 65 1 15 115 26 127 5.75e-13 72.8
Msa0051360 MtrunA17_Chr1g0154241 58.673 196 70 4 707 899 8 195 2.44e-64 219
Msa0051360 MtrunA17_Chr1g0154241 77.228 101 23 0 596 696 36 136 6.52e-48 172
Msa0051360 MtrunA17_Chr1g0154241 33.333 102 67 1 15 115 21 122 2.49e-13 71.6
Msa0051360 MtrunA17_Chr6g0464121 80.000 75 15 0 965 1039 122 196 6.22e-33 130
Msa0051360 MtrunA17_Chr6g0464121 66.667 84 26 2 274 355 113 196 9.20e-28 115
Msa0051360 MtrunA17_Chr1g0154121 67.442 86 26 1 278 361 1 86 1.02e-31 119
Msa0051360 MtrunA17_Chr1g0154121 62.500 80 27 2 962 1039 2 80 1.12e-24 99.4
Msa0051360 MtrunA17_Chr1g0154121 41.892 74 41 1 508 579 2 75 4.15e-13 66.6
Msa0051360 MtrunA17_Chr7g0233561 28.000 325 200 10 721 1037 19 317 6.73e-24 103
Msa0051360 MtrunA17_Chr7g0233561 30.645 124 82 2 11 133 13 133 1.75e-12 70.1
Msa0051360 MtrunA17_Chr1g0163071 24.606 317 204 6 31 347 2 283 9.91e-22 97.4
Msa0051360 MtrunA17_Chr3g0131891 26.606 327 192 9 721 1037 20 308 2.04e-21 97.1
Msa0051360 MtrunA17_Chr8g0390841 21.786 560 314 19 28 568 52 506 2.99e-21 99.0
Msa0051360 MtrunA17_Chr8g0390841 23.145 337 222 14 714 1043 35 341 3.27e-18 89.4
Msa0051360 MtrunA17_Chr7g0233541 26.861 309 195 9 735 1037 2 285 1.90e-20 93.2
Msa0051360 MtrunA17_Chr7g0233521 24.233 326 181 9 31 353 2 264 3.94e-18 85.9
Msa0051360 MtrunA17_Chr3g0077461 28.708 209 127 6 501 697 146 344 8.64e-16 81.6
Msa0051360 MtrunA17_Chr1g0162441 23.485 396 245 13 13 353 4 396 1.10e-15 80.9
Msa0051360 MtrunA17_Chr4g0033961 40.217 92 54 1 14 104 4 95 1.22e-15 80.9
Msa0051360 MtrunA17_Chr3g0103171 24.567 289 179 7 735 1023 6 255 8.12e-15 75.9
Msa0051360 MtrunA17_Chr3g0077411 27.230 213 126 6 501 697 171 370 9.01e-14 75.5
Msa0051360 MtrunA17_Chr7g0233571 28.571 133 90 2 716 846 5 134 6.73e-13 69.3
Msa0051360 MtrunA17_Chr7g0233531 38.667 75 46 0 735 809 2 76 1.26e-11 66.6
Msa0051360 MtrunA17_Chr1g0162411 35.870 92 58 1 14 104 5 96 2.11e-11 67.4
Msa0051360 MtrunA17_Chr4g0009491 28.272 191 106 5 519 697 161 332 7.49e-11 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0051360 AT4G33280.1 32.317 328 171 9 707 1019 11 302 9.96e-44 162
Msa0051360 AT4G33280.1 48.276 116 59 1 592 706 34 149 2.95e-28 117
Msa0051360 AT4G33280.3 29.570 372 184 10 707 1019 11 363 3.99e-40 154
Msa0051360 AT4G33280.3 49.107 112 55 2 592 702 34 144 2.46e-27 116
Msa0051360 AT4G33280.3 24.022 358 218 14 15 336 24 363 6.93e-13 72.4
Msa0051360 AT4G33280.2 50.781 128 62 1 707 833 11 138 1.14e-37 143
Msa0051360 AT4G33280.2 50.000 108 52 2 596 702 38 144 2.25e-28 116
Msa0051360 AT3G18990.1 26.100 341 215 10 718 1032 5 334 3.59e-23 102
Msa0051360 AT3G18990.1 25.562 356 218 12 13 347 3 332 3.91e-23 102
Msa0051360 AT3G18990.2 25.562 356 218 12 13 347 3 332 5.19e-23 102
Msa0051360 AT3G18990.2 25.369 339 220 9 718 1032 5 334 5.33e-23 102
Msa0051360 AT4G34400.2 37.079 89 55 1 592 680 27 114 3.93e-14 76.3
Msa0051360 AT4G34400.2 34.343 99 62 1 718 816 17 112 4.91e-13 72.8
Msa0051360 AT4G34400.1 37.079 89 55 1 592 680 27 114 3.93e-14 76.3
Msa0051360 AT4G34400.1 34.343 99 62 1 718 816 17 112 4.91e-13 72.8
Msa0051360 AT5G66980.1 22.190 347 216 11 15 348 9 314 1.57e-13 73.6
Msa0051360 AT5G66980.1 24.251 334 202 13 721 1032 11 315 6.01e-12 68.9
Msa0051360 AT3G06220.1 28.302 106 75 1 14 118 8 113 3.58e-12 66.2
Msa0051360 AT3G06220.1 28.889 90 64 0 597 686 25 114 1.67e-11 64.3
Msa0051360 AT3G06220.1 27.338 139 97 2 721 856 11 148 3.56e-11 63.5
Msa0051360 AT5G42700.2 30.556 144 89 3 216 354 42 179 1.85e-11 64.7
Msa0051360 AT5G42700.1 30.556 144 89 3 216 354 87 224 3.86e-11 64.7
Msa0051360 AT3G06160.2 25.743 101 75 0 14 114 67 167 5.91e-11 66.2
Msa0051360 AT3G06160.5 25.743 101 75 0 14 114 8 108 5.92e-11 65.5
Msa0051360 AT3G06160.4 25.743 101 75 0 14 114 8 108 5.92e-11 65.5
Msa0051360 AT3G06160.3 25.743 101 75 0 14 114 8 108 5.92e-11 65.5
Msa0051360 AT3G06160.1 25.743 101 75 0 14 114 23 123 6.03e-11 65.5

Find 204 sgRNAs with CRISPR-Local

Find 926 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAACTCCACTAGGACCTTTA+AGG 0.191352 1_2:+5468981 None:intergenic
CATTTCACTGCGCAAGTATT+TGG 0.196728 1_2:-5480847 Msa0051360:CDS
CGTGATAATGACATCAATTT+TGG 0.202243 1_2:-5478050 Msa0051360:CDS
AACAAGTTGTCGTTCAAAAT+TGG 0.231202 1_2:+5469769 None:intergenic
CCAGAAAATGTGACCCTTAA+AGG 0.236805 1_2:-5468995 Msa0051360:CDS
GATCACCAAAAGCTGCTAAT+TGG 0.248794 1_2:-5468577 Msa0051360:CDS
CCCATTAATCTCTCTCTCTT+TGG 0.250383 1_2:+5482076 None:intergenic
GAGCTAACTTTAGGTTTCTT+TGG 0.250603 1_2:+5478972 None:intergenic
GCATATATCTGGAAGTATTA+TGG 0.252813 1_2:+5478994 None:intergenic
TCTACCTTCCCACTTCTATT+CGG 0.257101 1_2:+5467569 None:intergenic
CACTGAATAGCTGCGGTCTT+AGG 0.262227 1_2:+5468641 None:intergenic
CCAGCAAATGTGACACTTAA+AGG 0.270345 1_2:-5470121 Msa0051360:CDS
TGCGGATTAGTTTCATTAAC+TGG 0.291460 1_2:-5481009 Msa0051360:CDS
ATTGTTCTGCCTTTGGCATC+TGG 0.293818 1_2:+5478107 None:intergenic
AGGTTTCTTTGGCATATATC+TGG 0.305794 1_2:+5478983 None:intergenic
TGGTCTAACCAACTCATAAT+TGG 0.307433 1_2:+5480624 None:intergenic
CCTTTAAGTGTCACATTTGC+TGG 0.308650 1_2:+5470121 None:intergenic
TATGGGCGGAAGACATTTAC+TGG 0.310032 1_2:-5469832 Msa0051360:CDS
CTGCACTTTGAGCTAACTTT+AGG 0.312808 1_2:+5478963 None:intergenic
ATAATCTTTGTCTTGCAGTT+TGG 0.320704 1_2:+5479275 None:intergenic
ACTAGCTGAACATTCTTTGC+AGG 0.325035 1_2:+5480573 None:intergenic
TGTGCAGCAGAGAACTGATA+TGG 0.328537 1_2:+5478200 None:intergenic
ATCACCAAAAGCTGCTAATT+GGG 0.331816 1_2:-5468576 Msa0051360:CDS
GCACCCCAATTAGCAGCTTT+TGG 0.336856 1_2:+5468572 None:intergenic
CTTCCTTCCCACTTCTATAC+AGG 0.338352 1_2:+5480319 None:intergenic
GTTTCTCTGATCATACTAAT+TGG 0.342872 1_2:+5480604 None:intergenic
CAAAATTGGTGTGAAGCAAT+AGG 0.343511 1_2:+5469783 None:intergenic
GCGAAATTGTGTGGAATATA+GGG 0.343728 1_2:-5470093 Msa0051360:CDS
ACCAAAGAGAGAGAGATTAA+TGG 0.346186 1_2:-5482077 Msa0051360:exon
TGTGACATCGAAAATTGATA+TGG 0.348004 1_2:+5479302 None:intergenic
GTGGAGTTACATGGAATATA+AGG 0.351253 1_2:-5468967 Msa0051360:CDS
TGGTGATCTTCTTCTCCTCT+TGG 0.352191 1_2:+5468592 None:intergenic
CTACCTTCCCACTTCTATTC+GGG 0.356067 1_2:+5467570 None:intergenic
ATTAATGGGTTGTGAGTGTA+AGG 0.359057 1_2:-5482062 Msa0051360:exon
AGCGAAATTGTGTGGAATAT+AGG 0.359861 1_2:-5470094 Msa0051360:CDS
TTTACAATATGGCGACCTTT+TGG 0.367843 1_2:-5480893 Msa0051360:CDS
GGAGATCATCATTTACAATA+TGG 0.369169 1_2:-5480904 Msa0051360:CDS
TTCTCAAACCAGCTTTAGCC+TGG 0.378926 1_2:+5478429 None:intergenic
TTGAATTCAATGGCTAAAAC+AGG 0.382436 1_2:+5478891 None:intergenic
GAGCCTGAGTTGGCTATTGC+TGG 0.383202 1_2:-5480658 Msa0051360:CDS
CCAAAGAGAGAGAGATTAAT+GGG 0.386089 1_2:-5482076 Msa0051360:exon
ATCGCTGAGGTTGGAAAAGA+TGG 0.386379 1_2:-5466882 Msa0051360:CDS
ACCGGATTTCTTGAATTCAA+TGG 0.386457 1_2:+5478881 None:intergenic
GCATCATCCGTGAACTGCTC+AGG 0.396249 1_2:+5468668 None:intergenic
ATTGCTGAGGTTGGAAAAGA+TGG 0.398863 1_2:-5479080 Msa0051360:CDS
ATTTCATCTTTGAATGTTGT+TGG 0.409910 1_2:-5480724 Msa0051360:CDS
GAAAAGAGGACGTAAATGAT+TGG 0.410999 1_2:+5480229 None:intergenic
GCCATTGAATTCAAGAAATC+CGG 0.411437 1_2:-5478882 Msa0051360:CDS
AAGGAAATCATTCTGCTTCA+AGG 0.417749 1_2:+5470006 None:intergenic
CTTGTATGCACTCTAGTTGT+TGG 0.420097 1_2:+5479209 None:intergenic
TGTTCGTGGCAATAGCATAA+AGG 0.424717 1_2:-5466961 Msa0051360:CDS
TCATCAATATGATATGATAA+TGG 0.426978 1_2:+5482446 None:intergenic
AAAATCGGTGTATCGCTGTT+TGG 0.430651 1_2:+5467080 None:intergenic
ATGTCGTGCCCTCCATTTGA+TGG 0.432582 1_2:+5481031 None:intergenic
GATTATTCTTTATAATTTGA+AGG 0.433632 1_2:-5479258 Msa0051360:CDS
TTACTATTTCCTGTTTGAAA+AGG 0.440868 1_2:+5480538 None:intergenic
CTCTCTATGTGGAGGATGGA+TGG 0.441035 1_2:-5466988 Msa0051360:CDS
TTCAACTTCGATGATATTGA+AGG 0.442101 1_2:-5480769 Msa0051360:CDS
AATCATCTGTTCTTTCATCA+TGG 0.447056 1_2:-5480943 Msa0051360:CDS
TCATGGATGGTCAACATTTG+TGG 0.447379 1_2:-5480926 Msa0051360:CDS
TTTAACAAAATATGGAAATG+AGG 0.449590 1_2:+5467466 None:intergenic
ACAGATCAATCAATCTCAAA+TGG 0.450374 1_2:-5477869 Msa0051360:intron
CACCATTGTACTTAAATACA+AGG 0.450916 1_2:+5469987 None:intergenic
GCAAGTTCGTTTAGTTGAGC+AGG 0.453021 1_2:-5480968 Msa0051360:CDS
CGTGTTCGCATTGCTGAGGT+TGG 0.454549 1_2:-5479089 Msa0051360:CDS
ACTGAATAGCTGCGGTCTTA+GGG 0.455599 1_2:+5468642 None:intergenic
TTCTTCAACCTCTCAATCTC+TGG 0.460887 1_2:-5481993 Msa0051360:intron
TTTAACAAAATATGGAAAAG+AGG 0.462248 1_2:+5480215 None:intergenic
CGTTTCTCATTATGTGATGC+AGG 0.466485 1_2:-5478006 Msa0051360:intron
CGAAGTAGTTGAAGCTCTAC+CGG 0.467583 1_2:+5478863 None:intergenic
GTCAATACTGCTTCTAATGC+TGG 0.468501 1_2:-5468698 Msa0051360:CDS
GGTGTGAATTGTTCTGCCTT+TGG 0.469200 1_2:+5478100 None:intergenic
CAATGGTGAATCACAGTTTG+AGG 0.469927 1_2:-5469972 Msa0051360:CDS
CTGGTCCTAGTGGAAATACT+TGG 0.471402 1_2:-5480990 Msa0051360:CDS
CACTCTATGTGGAGGATGGA+TGG 0.472108 1_2:-5479183 Msa0051360:CDS
TTCAACTACTTCGAAGAAGA+TGG 0.472680 1_2:-5478853 Msa0051360:CDS
CTTCCCACTTCTATTCGGGC+TGG 0.473485 1_2:+5467574 None:intergenic
AGAGATTGAGAGGTTGAAGA+AGG 0.474879 1_2:+5481995 None:intergenic
GAAATGAGGAGGAAAATGAT+TGG 0.481463 1_2:+5467480 None:intergenic
CAGTGTCCCTTCCTACCAAC+CGG 0.487408 1_2:-5468623 Msa0051360:CDS
CTAAGTTCCCAGGCTAAAGC+TGG 0.489551 1_2:-5478437 Msa0051360:CDS
AAAAGAGGACGTAAATGATT+GGG 0.490021 1_2:+5480230 None:intergenic
CATCATCCGTGAACTGCTCA+GGG 0.491192 1_2:+5468669 None:intergenic
ACGAGAACCACTGACATTGA+AGG 0.493660 1_2:+5467433 None:intergenic
CAATGGTGAATCGCACTTTG+AGG 0.494915 1_2:-5468846 Msa0051360:CDS
ATTTGATGGACAAAACCATC+TGG 0.494945 1_2:+5481045 None:intergenic
AAAATTGGTGTGAAGCAATA+GGG 0.495077 1_2:+5469784 None:intergenic
AACTCCACTAGGACCTTTAA+GGG 0.495173 1_2:+5468982 None:intergenic
ATATGAACCACTGACATTGA+AGG 0.496754 1_2:+5480182 None:intergenic
GTTCGCATCATCGCTGAGGT+TGG 0.499004 1_2:-5466891 Msa0051360:CDS
CTATTTACTTCACGAACGGT+TGG 0.500392 1_2:-5470051 Msa0051360:CDS
AAAAGATGGGTTAGACTGCC+AGG 0.502243 1_2:-5479066 Msa0051360:CDS
ATTATTCTTTATAATTTGAA+GGG 0.502841 1_2:-5479257 Msa0051360:CDS
TGGAAATACTTTCTGTGAGA+AGG 0.503331 1_2:-5469936 Msa0051360:CDS
CCCCTTGTGCTGTTTGAGCA+TGG 0.505067 1_2:+5468759 None:intergenic
AGGTTGAAGAAGGGTTAAAG+AGG 0.505560 1_2:+5482005 None:intergenic
GTGCGACGCCATTGAGAACC+AGG 0.505570 1_2:-5480680 Msa0051360:CDS
ATCTGTTCTTTCATCATGGA+TGG 0.506290 1_2:-5480939 Msa0051360:CDS
CATGGATGGTCAACATTTGT+GGG 0.508036 1_2:-5480925 Msa0051360:CDS
ACTGTATTCAACACCACCAC+TGG 0.515696 1_2:+5469868 None:intergenic
GGAAATAGTAATGAAGTTGA+AGG 0.516580 1_2:-5480526 Msa0051360:intron
GATGCGCAGTCGAAAATTGA+TGG 0.517848 1_2:+5467105 None:intergenic
TTCCTTGTATTTAAGTACAA+TGG 0.518389 1_2:-5469989 Msa0051360:CDS
AGAAATTACCAGAGATTGAG+AGG 0.520071 1_2:+5481985 None:intergenic
CTCAGGCTCCTGGTTCTCAA+TGG 0.520233 1_2:+5480672 None:intergenic
ACACGGAGCGACAGTGTTGT+TGG 0.524076 1_2:+5482384 None:intergenic
CTGTTTACTTCGTGGACGGT+TGG 0.525501 1_2:-5468925 Msa0051360:CDS
TGATTCCCCTGAGCAGTTCA+CGG 0.528517 1_2:-5468675 Msa0051360:CDS
AAATGAGGAGGAAAATGATT+GGG 0.529211 1_2:+5467481 None:intergenic
TAACCAACTCATAATTGGAT+AGG 0.529426 1_2:+5480629 None:intergenic
AAAATTTGAAGGGAGAACAC+TGG 0.530161 1_2:-5467052 Msa0051360:CDS
TCTTCAACACGATGTTTCCT+CGG 0.530379 1_2:+5478464 None:intergenic
CAATAGCCAACTCAGGCTCC+TGG 0.530813 1_2:+5480662 None:intergenic
AAACCTATCCAATTATGAGT+TGG 0.533124 1_2:-5480632 Msa0051360:CDS
TCAACTACTTCGAAGAAGAT+GGG 0.533657 1_2:-5478852 Msa0051360:CDS
TTAAAGAGGTGATAGAAGTG+AGG 0.536876 1_2:+5482019 None:intergenic
GCAATTCAAGAGGCCAGTGT+TGG 0.538663 1_2:-5478145 Msa0051360:CDS
CGTGGCAATAGCATAAAAGT+TGG 0.540845 1_2:-5479152 Msa0051360:CDS
GGCACTGTTTACTTCGTGGA+CGG 0.546441 1_2:-5468929 Msa0051360:CDS
ATGCGCAGTCGAAAATTGAT+GGG 0.549894 1_2:+5467106 None:intergenic
CACCATTGTACTTACAGACA+AGG 0.550322 1_2:+5468861 None:intergenic
GGCCATGCTCAAACAGCACA+AGG 0.557535 1_2:-5468761 Msa0051360:CDS
AAGGTCCTAGTGGAGTTACA+TGG 0.559188 1_2:-5468976 Msa0051360:CDS
CCTCGTATCTGAAAACCAAA+AGG 0.559251 1_2:+5480878 None:intergenic
TTCCTGTTTGAAAAGGAACA+TGG 0.559808 1_2:+5480545 None:intergenic
GATGGGTTAGACTGCCAGGT+TGG 0.562198 1_2:-5479062 Msa0051360:CDS
CCATGCTCAAACAGCACAAG+GGG 0.563471 1_2:-5468759 Msa0051360:CDS
AGATGGCACTGTTTACTTCG+TGG 0.564148 1_2:-5468933 Msa0051360:CDS
GATACTATTTACTTCACGAA+CGG 0.565840 1_2:-5470055 Msa0051360:CDS
GTCACTCTCTATGTGGAGGA+TGG 0.566600 1_2:-5466992 Msa0051360:CDS
TGTCAGTGGTTCATATACTC+TGG 0.566827 1_2:-5480175 Msa0051360:intron
ATAATTTGAAGGGAGAACAC+TGG 0.567172 1_2:-5479247 Msa0051360:CDS
TTTCACAAAATTAGGAAATG+GGG 0.568261 1_2:+5478361 None:intergenic
GCAGCCAGCCCGAATAGAAG+TGG 0.568438 1_2:-5467578 Msa0051360:CDS
TTTGACCAGGTGTTGCGCGA+AGG 0.571539 1_2:-5482208 Msa0051360:intron
CAAATGGAGGGCACGACATG+CGG 0.572358 1_2:-5481027 Msa0051360:CDS
TTACCAGCAATAGCCAACTC+AGG 0.573877 1_2:+5480655 None:intergenic
CGTGGCAATAGCATAAAGGT+TGG 0.575050 1_2:-5466957 Msa0051360:CDS
GTTACGCTTCGCAATTCAAG+AGG 0.575759 1_2:-5478155 Msa0051360:CDS
AACAAAATATGGAAATGAGG+AGG 0.576763 1_2:+5467469 None:intergenic
ATATTCCACACAATTTCGCT+AGG 0.577458 1_2:+5470097 None:intergenic
GTTTCATTAACTGGTCCTAG+TGG 0.577634 1_2:-5481000 Msa0051360:CDS
ATGAAGAAGTTCAATGTCAG+TGG 0.577831 1_2:-5478335 Msa0051360:CDS
GAGATTGAGAGGTTGAAGAA+GGG 0.578022 1_2:+5481996 None:intergenic
CATACAAGTCACACTCTATG+TGG 0.582424 1_2:-5479194 Msa0051360:CDS
ATTAAAGCCTTCAATGTCAG+TGG 0.584287 1_2:-5467440 Msa0051360:CDS
GCAGCAATCCTGTATAGAAG+TGG 0.586525 1_2:-5480327 Msa0051360:CDS
TGAGAACCAGGAGCCTGAGT+TGG 0.586623 1_2:-5480668 Msa0051360:CDS
GTCACACTCTATGTGGAGGA+TGG 0.589858 1_2:-5479187 Msa0051360:CDS
TCTCAAACCAGCTTTAGCCT+GGG 0.589973 1_2:+5478430 None:intergenic
TGAAGATGAACTAAGTTCCC+AGG 0.590157 1_2:-5478447 Msa0051360:CDS
CATACAAGTCACTCTCTATG+TGG 0.592515 1_2:-5466999 Msa0051360:CDS
GTGCAGCAGAGAACTGATAT+GGG 0.592876 1_2:+5478201 None:intergenic
GATGTCATTATCACGAACAA+AGG 0.594099 1_2:+5478058 None:intergenic
ATATTCCATGTAACTCCACT+AGG 0.595976 1_2:+5468971 None:intergenic
ATCAAAACCTTCAATGTCAG+TGG 0.599816 1_2:-5480189 Msa0051360:CDS
AATCATTCTGCTTCAAGGAG+TGG 0.605301 1_2:+5470011 None:intergenic
GCCATGCTCAAACAGCACAA+GGG 0.608681 1_2:-5468760 Msa0051360:CDS
CAGGTGTTGCGCGAAGGCGA+AGG 0.610319 1_2:-5482202 Msa0051360:five_prime_UTR
TTGCTGAGGTTGGAAAAGAT+GGG 0.610413 1_2:-5479079 Msa0051360:CDS
TGTCAGTGGATCATACACTT+TGG 0.614461 1_2:-5478321 Msa0051360:intron
AAGGTCCTAGCGAAATTGTG+TGG 0.616080 1_2:-5470102 Msa0051360:CDS
CTTTGGGTTGAGTAGTTACG+AGG 0.616493 1_2:+5482357 None:intergenic
CAGCAATCCTGTATAGAAGT+GGG 0.617200 1_2:-5480326 Msa0051360:CDS
TCACCAAAAGCTGCTAATTG+GGG 0.618986 1_2:-5468575 Msa0051360:intron
GATGACCACGATATTCTTAG+CGG 0.619282 1_2:-5480297 Msa0051360:CDS
CAACTACTTCGAAGAAGATG+GGG 0.619729 1_2:-5478851 Msa0051360:CDS
ATAAGGCTGACAACTAGAGA+TGG 0.621631 1_2:-5468950 Msa0051360:CDS
GCTCATAGTCCTTCCAGTGG+TGG 0.622038 1_2:-5469881 Msa0051360:CDS
CAGCCAGCCCGAATAGAAGT+GGG 0.622825 1_2:-5467577 Msa0051360:CDS
TCGTGTTCGCATCATCGCTG+AGG 0.627143 1_2:-5466895 Msa0051360:CDS
TATTCAACACCACCACTGGA+AGG 0.627646 1_2:+5469872 None:intergenic
AAAAGCTAGTCTTTCAACGA+GGG 0.627778 1_2:+5466850 None:intergenic
GTGACCCTTAAAGGTCCTAG+TGG 0.630968 1_2:-5468986 Msa0051360:CDS
TCGCTGAGGTTGGAAAAGAT+GGG 0.633760 1_2:-5466881 Msa0051360:CDS
ACTTGCCAAGTATTTCCACT+AGG 0.637449 1_2:+5480985 None:intergenic
ATTACGTGTTCGCATTGCTG+AGG 0.639477 1_2:-5479093 Msa0051360:CDS
AACTCTGTTCCAGATGCCAA+AGG 0.640736 1_2:-5478116 Msa0051360:CDS
GTGATGTTCAGAAGAAAATG+AGG 0.641443 1_2:-5480702 Msa0051360:CDS
AAAGTCAACAGCACTTGTTG+AGG 0.643971 1_2:-5467513 Msa0051360:CDS
AATATAGGGCTTACAACTAG+AGG 0.644207 1_2:-5470079 Msa0051360:CDS
CAGCCCGAATAGAAGTGGGA+AGG 0.644571 1_2:-5467573 Msa0051360:CDS
TTCCTTGTCTGTAAGTACAA+TGG 0.651999 1_2:-5468863 Msa0051360:CDS
AAGCTCCGCTGTAAATACAA+TGG 0.661159 1_2:+5467543 None:intergenic
AATCCTGTATAGAAGTGGGA+AGG 0.661650 1_2:-5480322 Msa0051360:CDS
CAACCGGCAAAAGAACCAAG+AGG 0.662281 1_2:-5468607 Msa0051360:CDS
ACAAGTCACTCTCTATGTGG+AGG 0.663448 1_2:-5466996 Msa0051360:CDS
CTCGTAACTACTCAACCCAA+AGG 0.665100 1_2:-5482356 Msa0051360:intron
AGTAGTTACGAGGAGAAACA+CGG 0.669808 1_2:+5482367 None:intergenic
TAGCTCAAAGTGCAGAACGA+AGG 0.671058 1_2:-5478955 Msa0051360:CDS
ACAAGTCACACTCTATGTGG+AGG 0.673956 1_2:-5479191 Msa0051360:CDS
GACGACCATTGTATTTACAG+CGG 0.683968 1_2:-5467548 Msa0051360:CDS
GAAGGGACACTGAATAGCTG+CGG 0.686057 1_2:+5468634 None:intergenic
CAGAGTTTACAATCCAACAC+TGG 0.686442 1_2:+5478132 None:intergenic
TTAATGCAGAGAGTTCCAGA+TGG 0.692519 1_2:-5481060 Msa0051360:intron
CAAGCTCATAGTCCTTCCAG+TGG 0.692805 1_2:-5469884 Msa0051360:CDS
TGCGCAGTCGAAAATTGATG+GGG 0.696177 1_2:+5467107 None:intergenic
AGGACAGAAAAGTGATGCTG+AGG 0.705655 1_2:-5480749 Msa0051360:CDS
TTAATGGGTTGTGAGTGTAA+GGG 0.706467 1_2:-5482061 Msa0051360:CDS
AAGCTCCGCTAAGAATATCG+TGG 0.708377 1_2:+5480292 None:intergenic
AAACAAAGACAGCTGTACCG+AGG 0.720792 1_2:-5478481 Msa0051360:intron
ATCATCCGTGAACTGCTCAG+GGG 0.723242 1_2:+5468670 None:intergenic
TAAAAGCTAGTCTTTCAACG+AGG 0.738663 1_2:+5466849 None:intergenic
CATGCTCAAACAGCACAAGG+GGG 0.765396 1_2:-5468758 Msa0051360:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTAATTTTTTTTTTTTTT+TGG + chr1_2:5471954-5471973 None:intergenic 0.0%
!! AAAAAAAAAAAAATTAAAAA+AGG - chr1_2:5471955-5471974 Msa0051360:intron 0.0%
!! AATTAAAGTTATATACATTT+AGG + chr1_2:5467397-5467416 None:intergenic 10.0%
!!! TATTTGAGATTTAAAAAAAA+TGG - chr1_2:5467788-5467807 Msa0051360:intron 10.0%
!!! TTGATTATTTTAACAAAATA+TGG + chr1_2:5469102-5469121 None:intergenic 10.0%
!! ATTATTCTTTATAATTTGAA+GGG - chr1_2:5470049-5470068 Msa0051360:CDS 10.0%
!!! TATTTATTTGATTTATAACT+TGG + chr1_2:5471823-5471842 None:intergenic 10.0%
!!! CGAAAAAATATTAATTTTTT+AGG - chr1_2:5472150-5472169 Msa0051360:intron 10.0%
!!! TATTTTATTTTTTATACCAA+AGG - chr1_2:5472471-5472490 Msa0051360:intron 10.0%
!!! TAATAAAAGTCATTTTTATT+TGG + chr1_2:5472588-5472607 None:intergenic 10.0%
!!! GTTTTATTTCAAAAAAAAAA+AGG + chr1_2:5472990-5473009 None:intergenic 10.0%
!!! ATTATTTTCTTAATTTCTAA+CGG + chr1_2:5473024-5473043 None:intergenic 10.0%
!! ATCTATAAAAATACATAAAA+AGG + chr1_2:5474620-5474639 None:intergenic 10.0%
!!! CAAAAATACAATTTAAAATA+GGG + chr1_2:5474979-5474998 None:intergenic 10.0%
!!! ACAAAAATACAATTTAAAAT+AGG + chr1_2:5474980-5474999 None:intergenic 10.0%
!!! TTTTTTATAAGAAAATTTTG+AGG + chr1_2:5475693-5475712 None:intergenic 10.0%
!! TATTTATGTTATTAAAGTTT+AGG - chr1_2:5476154-5476173 Msa0051360:intron 10.0%
!!! ACATAAGATTTTTTTTTTAA+AGG - chr1_2:5476535-5476554 Msa0051360:intron 10.0%
!! TAAAAAAAATAGAAAAATGA+CGG + chr1_2:5479690-5479709 None:intergenic 10.0%
!!! TTATTGTTGTTTTTAAATAA+TGG - chr1_2:5479885-5479904 Msa0051360:intron 10.0%
!!! TATTGTTGTTTTTAAATAAT+GGG - chr1_2:5479886-5479905 Msa0051360:intron 10.0%
!! AGATTAAAAAATAATTGAAG+GGG + chr1_2:5467045-5467064 None:intergenic 15.0%
!! CAGATTAAAAAATAATTGAA+GGG + chr1_2:5467046-5467065 None:intergenic 15.0%
!! ACAGATTAAAAAATAATTGA+AGG + chr1_2:5467047-5467066 None:intergenic 15.0%
!!! TTTGTTGAATTAATTTTCAA+TGG - chr1_2:5467151-5467170 Msa0051360:intron 15.0%
!! GATAAATTATAAATGACAAA+AGG + chr1_2:5469167-5469186 None:intergenic 15.0%
!! TAAAATAAGTCAATCAAAAT+GGG - chr1_2:5469642-5469661 Msa0051360:intron 15.0%
!!! GTTTCTTATTTTAAGTTTAA+TGG - chr1_2:5469888-5469907 Msa0051360:CDS 15.0%
!! GATTATTCTTTATAATTTGA+AGG - chr1_2:5470048-5470067 Msa0051360:CDS 15.0%
!!! TATTTTTTTTACAATTGCAA+TGG - chr1_2:5470695-5470714 Msa0051360:intron 15.0%
!!! ATTTTTTTTTTTTTTTGGTC+AGG + chr1_2:5471949-5471968 None:intergenic 15.0%
!!! AATGACTTTTATTACTTTAA+TGG - chr1_2:5472594-5472613 Msa0051360:intron 15.0%
!!! AAATCTATTTTTTAACTCTA+AGG - chr1_2:5472704-5472723 Msa0051360:intron 15.0%
!!! AATCTATTTTTTAACTCTAA+GGG - chr1_2:5472705-5472724 Msa0051360:intron 15.0%
!! AATACATCAAATATAGATTT+GGG + chr1_2:5473176-5473195 None:intergenic 15.0%
!!! TTTTTACAACAATAAAGAAA+AGG + chr1_2:5473310-5473329 None:intergenic 15.0%
!! CACTTATAAAAAGAAAAATT+TGG - chr1_2:5473995-5474014 Msa0051360:intron 15.0%
!!! TATATGTTTTGTATTTTACA+GGG + chr1_2:5474173-5474192 None:intergenic 15.0%
!!! ATATATGTTTTGTATTTTAC+AGG + chr1_2:5474174-5474193 None:intergenic 15.0%
!! TAAGAAATTCATAATTATGA+GGG + chr1_2:5474385-5474404 None:intergenic 15.0%
!! TTAAGAAATTCATAATTATG+AGG + chr1_2:5474386-5474405 None:intergenic 15.0%
!!! ATTTTTTCATGATTTATTAG+AGG + chr1_2:5474804-5474823 None:intergenic 15.0%
!!! AATACATGTTATTTAATTAC+AGG - chr1_2:5474903-5474922 Msa0051360:intron 15.0%
!!! ATACATGTTATTTAATTACA+GGG - chr1_2:5474904-5474923 Msa0051360:intron 15.0%
!! AAATTAATTTATGTACTTTG+AGG - chr1_2:5475496-5475515 Msa0051360:intron 15.0%
!! TTCAAATTATTGTTAAGTAA+AGG + chr1_2:5476451-5476470 None:intergenic 15.0%
!! TAAGAAAAAGAAATCTAATT+TGG - chr1_2:5477186-5477205 Msa0051360:intron 15.0%
!!! TTCTATAAAAATATTTTGCA+AGG - chr1_2:5477379-5477398 Msa0051360:intron 15.0%
!! GGTATTATTCTTAAAAATTT+GGG + chr1_2:5477531-5477550 None:intergenic 15.0%
!! TGGTATTATTCTTAAAAATT+TGG + chr1_2:5477532-5477551 None:intergenic 15.0%
!! TATATAAACTTTAACATCAT+AGG + chr1_2:5477626-5477645 None:intergenic 15.0%
!! ATAAAACTAATAATCACAAA+AGG - chr1_2:5477778-5477797 Msa0051360:intron 15.0%
!!! TTAATTCTTATCCTTAATTT+TGG - chr1_2:5477899-5477918 Msa0051360:intron 15.0%
!!! ATTTTTTTTGACCAAAATTA+AGG + chr1_2:5477913-5477932 None:intergenic 15.0%
!! AACATTTCATATTATTGTTA+AGG + chr1_2:5477942-5477961 None:intergenic 15.0%
!! TCAAAACGAAAAATAATTAA+CGG - chr1_2:5477962-5477981 Msa0051360:intron 15.0%
!! ATAAGATGATAAATGATAAA+GGG - chr1_2:5478019-5478038 Msa0051360:CDS 15.0%
!!! AAAATGTTTAATTGCAATTT+TGG + chr1_2:5478073-5478092 None:intergenic 15.0%
!! AATATAAAAGTGATAGAATT+AGG - chr1_2:5478110-5478129 Msa0051360:CDS 15.0%
!! ATATAAAAGTGATAGAATTA+GGG - chr1_2:5478111-5478130 Msa0051360:CDS 15.0%
!!! AAGATAAAAATTTAAAACGT+GGG + chr1_2:5479718-5479737 None:intergenic 15.0%
!!! AAAGATAAAAATTTAAAACG+TGG + chr1_2:5479719-5479738 None:intergenic 15.0%
!! TTTAATATCGTAAAAGTTAA+TGG + chr1_2:5480822-5480841 None:intergenic 15.0%
!!! TTAACTTTTACGATATTAAA+TGG - chr1_2:5480822-5480841 Msa0051360:CDS 15.0%
!! AAAGTTAACCAAAAAAAAAA+TGG + chr1_2:5480947-5480966 None:intergenic 15.0%
!! TTTACTTAAAAATGACATAT+CGG - chr1_2:5481078-5481097 Msa0051360:intron 15.0%
!!! AAAATTGATTTATTTGAACT+AGG + chr1_2:5481104-5481123 None:intergenic 15.0%
!! GTATATTAAAAATCACAAAA+GGG + chr1_2:5481915-5481934 None:intergenic 15.0%
!! AATATGATAACAATAACAAT+TGG + chr1_2:5481989-5482008 None:intergenic 15.0%
!!! TTCAAATTTTGAAGAAAAAT+CGG + chr1_2:5482244-5482263 None:intergenic 15.0%
!!! ATTTTTCTTCAAAATTTGAA+GGG - chr1_2:5482244-5482263 Msa0051360:intron 15.0%
!! ATAAATTGAAACATGCAATT+AGG + chr1_2:5467364-5467383 None:intergenic 20.0%
!!! ATTTTGTACACAAGTAAAAT+TGG - chr1_2:5467469-5467488 Msa0051360:CDS 20.0%
!!! ACTCTAAAAGAAAATACTTT+CGG + chr1_2:5467716-5467735 None:intergenic 20.0%
!!! ATTTTCTTTTAGAGTATGTT+TGG - chr1_2:5467721-5467740 Msa0051360:intron 20.0%
!!! AATACTTTTTGGTAAAGTTA+GGG + chr1_2:5468040-5468059 None:intergenic 20.0%
!!! TTTACCAAAAAGTATTGATT+TGG - chr1_2:5468044-5468063 Msa0051360:intron 20.0%
!!! AATTCCAAATCAATACTTTT+TGG + chr1_2:5468051-5468070 None:intergenic 20.0%
!! TTAAATAAAATGATAAGCTC+TGG + chr1_2:5468927-5468946 None:intergenic 20.0%
!! TTTAACAAAATATGGAAAAG+AGG + chr1_2:5469094-5469113 None:intergenic 20.0%
!! CTAAAATAAGTCAATCAAAA+TGG - chr1_2:5469641-5469660 Msa0051360:intron 20.0%
!!! TTTTCACAAAATTAGGAAAT+GGG + chr1_2:5470949-5470968 None:intergenic 20.0%
!!! ATTTTCACAAAATTAGGAAA+TGG + chr1_2:5470950-5470969 None:intergenic 20.0%
!!! TTCATGATTTTCACAAAATT+AGG + chr1_2:5470956-5470975 None:intergenic 20.0%
!! AATAAAATTATACATGCACA+AGG - chr1_2:5472399-5472418 Msa0051360:intron 20.0%
!! ATAAAATTATACATGCACAA+GGG - chr1_2:5472400-5472419 Msa0051360:intron 20.0%
!!! TAGATTTTAGAAAAACTACT+AGG + chr1_2:5472691-5472710 None:intergenic 20.0%
!!! AAGGGTTTGATTTTTTATTT+TGG + chr1_2:5472843-5472862 None:intergenic 20.0%
!! ATACATCAAATATAGATTTG+GGG + chr1_2:5473175-5473194 None:intergenic 20.0%
!! CAATACATCAAATATAGATT+TGG + chr1_2:5473177-5473196 None:intergenic 20.0%
!! ATGACTAAAGAATTTAAGTA+AGG - chr1_2:5473266-5473285 Msa0051360:intron 20.0%
!! CTTTATTGTTGTAAAAAGAT+CGG - chr1_2:5473313-5473332 Msa0051360:intron 20.0%
!! GAATAAAGTTAGAGTTATTT+AGG + chr1_2:5473387-5473406 None:intergenic 20.0%
!!! TATTCCTCTTTTATAATTTG+CGG - chr1_2:5473402-5473421 Msa0051360:intron 20.0%
!!! CTTTTTATAAGTGTGTTAAT+GGG + chr1_2:5473988-5474007 None:intergenic 20.0%
!!! TCTTTTTATAAGTGTGTTAA+TGG + chr1_2:5473989-5474008 None:intergenic 20.0%
!! AAATTAAATTTCTTCGACTA+TGG - chr1_2:5474335-5474354 Msa0051360:intron 20.0%
!!! AATTTCAATTTTGCACATTT+TGG - chr1_2:5474539-5474558 Msa0051360:intron 20.0%
!! AAACTCAAAAAACAAAACAA+CGG + chr1_2:5474690-5474709 None:intergenic 20.0%
!! ATCATTTCTCTTATAATGTA+TGG - chr1_2:5475141-5475160 Msa0051360:intron 20.0%
!!! ATATGAAACACTAGTAATTT+TGG + chr1_2:5475785-5475804 None:intergenic 20.0%
!! GTAATAAAACTAATCACAAA+AGG - chr1_2:5476322-5476341 Msa0051360:intron 20.0%
!!! TCATGTTCATACATATTTTA+GGG + chr1_2:5476372-5476391 None:intergenic 20.0%
!!! TTCATGTTCATACATATTTT+AGG + chr1_2:5476373-5476392 None:intergenic 20.0%
!! AATCCAACATAAGATTATAA+AGG - chr1_2:5476561-5476580 Msa0051360:intron 20.0%
!! ATCCAACATAAGATTATAAA+GGG - chr1_2:5476562-5476581 Msa0051360:intron 20.0%
!! ATCATTTCTCTTATAATGTA+TGG - chr1_2:5475141-5475160 Msa0051360:intron 20.0%
!! ACTCATCAAATTATTTAAGA+CGG + chr1_2:5476939-5476958 None:intergenic 20.0%
!! AATAATTTGATGAGTATTCA+AGG - chr1_2:5476944-5476963 Msa0051360:intron 20.0%
!!! ACAAAGTTATTTTTTCAAGA+AGG - chr1_2:5477091-5477110 Msa0051360:intron 20.0%
!!! CAAAGTTATTTTTTCAAGAA+GGG - chr1_2:5477092-5477111 Msa0051360:intron 20.0%
!!! AAAGTTATTTTTTCAAGAAG+GGG - chr1_2:5477093-5477112 Msa0051360:intron 20.0%
!!! AGAAACTTTTGATGTTAAAT+GGG + chr1_2:5477459-5477478 None:intergenic 20.0%
!!! AAGAAACTTTTGATGTTAAA+TGG + chr1_2:5477460-5477479 None:intergenic 20.0%
!! TATCATTTATCATCTTATGT+TGG + chr1_2:5478017-5478036 None:intergenic 20.0%
!! CATAAGATGATAAATGATAA+AGG - chr1_2:5478018-5478037 Msa0051360:CDS 20.0%
!! TTATGTAAACAAAACGAAAA+TGG - chr1_2:5478043-5478062 Msa0051360:CDS 20.0%
!! AGATACAAAATTTAAGAGAT+GGG + chr1_2:5478457-5478476 None:intergenic 20.0%
!! AAGATACAAAATTTAAGAGA+TGG + chr1_2:5478458-5478477 None:intergenic 20.0%
!!! AAAAAACATTTATCTAGAGT+AGG - chr1_2:5479004-5479023 Msa0051360:CDS 20.0%
!!! TATTATTTTCTTGAGAAACA+TGG + chr1_2:5479053-5479072 None:intergenic 20.0%
!!! CAATGTTTATTAGTCTTAAA+TGG - chr1_2:5479099-5479118 Msa0051360:CDS 20.0%
!!! AAATTGTCTGAAAATGTTTT+CGG + chr1_2:5479152-5479171 None:intergenic 20.0%
!!! TTTGAGGTTTTAATCTTTAA+TGG - chr1_2:5479350-5479369 Msa0051360:intron 20.0%
!!! TCATATTTTGTTCAAAAATG+TGG - chr1_2:5479398-5479417 Msa0051360:intron 20.0%
!!! GTTTTTATTTTTCATTCATG+TGG + chr1_2:5479615-5479634 None:intergenic 20.0%
!! AAAGAACTAAATGCATTTAA+AGG + chr1_2:5479750-5479769 None:intergenic 20.0%
!!! AATAATGAGCTTTTGATTAT+TGG - chr1_2:5479807-5479826 Msa0051360:intron 20.0%
!!! TTATTATTCTTTTCCTTGTT+CGG - chr1_2:5480077-5480096 Msa0051360:intron 20.0%
!!! AATAGTTATGTTTAGCTTTT+CGG - chr1_2:5480157-5480176 Msa0051360:intron 20.0%
!! TAATGTTTCTTAATCTCATT+TGG - chr1_2:5480225-5480244 Msa0051360:CDS 20.0%
!!! GAAATTTATACTTTTATTGC+AGG - chr1_2:5480247-5480266 Msa0051360:CDS 20.0%
!!! AAATTGTCTGAAAATGTTTT+AGG + chr1_2:5479152-5479171 None:intergenic 20.0%
!!! AGAAAGAAATATTTTAACCT+GGG + chr1_2:5480796-5480815 None:intergenic 20.0%
!!! AAGAAAGAAATATTTTAACC+TGG + chr1_2:5480797-5480816 None:intergenic 20.0%
!! ATCAAATGAAAAAAGAAAAG+TGG + chr1_2:5480980-5480999 None:intergenic 20.0%
!!! TGTTTATGTTGATGATATTA+AGG + chr1_2:5481451-5481470 None:intergenic 20.0%
!! AATCATGAGTTACAAATAAA+AGG + chr1_2:5481687-5481706 None:intergenic 20.0%
!! TTTAACAAAATATGGAAATG+AGG + chr1_2:5481843-5481862 None:intergenic 20.0%
!! GGTATATTAAAAATCACAAA+AGG + chr1_2:5481916-5481935 None:intergenic 20.0%
!!! CAATAAAAAATTTTAAGCGA+AGG + chr1_2:5482014-5482033 None:intergenic 20.0%
!!! GTTTCCTATTTAAAGTTTAT+TGG - chr1_2:5482071-5482090 Msa0051360:exon 20.0%
!!! GATTTTTCTTCAAAATTTGA+AGG - chr1_2:5482243-5482262 Msa0051360:intron 20.0%
!!! TTCATTATTTTTGTTTGACC+AGG - chr1_2:5467085-5467104 Msa0051360:CDS 25.0%
! AAGTAAAATTGGAAGCAAAT+GGG - chr1_2:5467480-5467499 Msa0051360:CDS 25.0%
!!! TCTAAGATGTTTATCTTTTG+AGG - chr1_2:5467504-5467523 Msa0051360:CDS 25.0%
!! CGATTTTCTTTTATGAATCA+AGG + chr1_2:5467883-5467902 None:intergenic 25.0%
!!! CAATACTTTTTGGTAAAGTT+AGG + chr1_2:5468041-5468060 None:intergenic 25.0%
!!! AGTATTGATTTGGAATTGAT+TGG - chr1_2:5468054-5468073 Msa0051360:intron 25.0%
!! GTTATTCTCTGCATTTTTAA+GGG + chr1_2:5468080-5468099 None:intergenic 25.0%
!! TGTTATTCTCTGCATTTTTA+AGG + chr1_2:5468081-5468100 None:intergenic 25.0%
!! TGGATATCATAAAATGCTTT+TGG - chr1_2:5468198-5468217 Msa0051360:intron 25.0%
! ATTTCATCTTTGAATGTTGT+TGG - chr1_2:5468582-5468601 Msa0051360:CDS 25.0%
! TTACTATTTCCTGTTTGAAA+AGG + chr1_2:5468771-5468790 None:intergenic 25.0%
! TAGCAAATTCAATTTCATTC+TGG - chr1_2:5468805-5468824 Msa0051360:CDS 25.0%
! AGCAAATTCAATTTCATTCT+GGG - chr1_2:5468806-5468825 Msa0051360:CDS 25.0%
! AGAAGATAACAGCATTATTT+GGG + chr1_2:5469191-5469210 None:intergenic 25.0%
! AAGAAGATAACAGCATTATT+TGG + chr1_2:5469192-5469211 None:intergenic 25.0%
! TTTGTTTGCATAAGCTATTT+AGG + chr1_2:5469497-5469516 None:intergenic 25.0%
! TATTATTCATAAGCTTGTCA+AGG + chr1_2:5469593-5469612 None:intergenic 25.0%
!!! TTTTTTTGACAAAGAGTAGA+AGG + chr1_2:5469843-5469862 None:intergenic 25.0%
! ATAAGAAACATGTAAGTAGA+AGG + chr1_2:5469877-5469896 None:intergenic 25.0%
! GATAAAAAGTTGTCAAAGAT+TGG - chr1_2:5470385-5470404 Msa0051360:intron 25.0%
!! AATATAATTTGCCATCTAGT+GGG + chr1_2:5470539-5470558 None:intergenic 25.0%
!! AATATAATTTGCCATCTAGT+GGG + chr1_2:5470539-5470558 None:intergenic 25.0%
! TAGTGAAAGAAAGAACAAAA+AGG - chr1_2:5470729-5470748 Msa0051360:intron 25.0%
! TTTCACAAAATTAGGAAATG+GGG + chr1_2:5470948-5470967 None:intergenic 25.0%
!!! AATACTACTATAGCCTTTTT+TGG - chr1_2:5471889-5471908 Msa0051360:intron 25.0%
! AGACAAATTATAAGCTATTC+AGG + chr1_2:5472290-5472309 None:intergenic 25.0%
!!! TATTTTGGTAGTGTTTACAA+GGG + chr1_2:5472828-5472847 None:intergenic 25.0%
!!! TTATTTTGGTAGTGTTTACA+AGG + chr1_2:5472829-5472848 None:intergenic 25.0%
! TATGTCACATCTATAATACA+TGG - chr1_2:5473232-5473251 Msa0051360:intron 25.0%
!!! ATACTATTTTGATGTGTGAT+GGG - chr1_2:5473428-5473447 Msa0051360:intron 25.0%
!!! ATACTATTTTGATGTGTGAT+GGG + chr1_2:5473428-5473447 None:intergenic 25.0%
! TCTCAACTAATCATATATTG+CGG + chr1_2:5473541-5473560 None:intergenic 25.0%
!! CCATTACTAGCTTATAATTT+CGG + chr1_2:5473611-5473630 None:intergenic 25.0%
! CGAAATTATAAGCTAGTAAT+GGG - chr1_2:5473609-5473628 Msa0051360:intron 25.0%
! GTAGTGTGCTAAATAAAATT+AGG + chr1_2:5474072-5474091 None:intergenic 25.0%
! TTTATTTAGCACACTACTAA+CGG - chr1_2:5474075-5474094 Msa0051360:intron 25.0%
!!! GTTCATCTCTCTTATTTTAA+CGG - chr1_2:5474098-5474117 Msa0051360:intron 25.0%
!!! TTCATCTCTCTTATTTTAAC+GGG - chr1_2:5474099-5474118 Msa0051360:intron 25.0%
! CAGACATAATGTATATTACA+GGG + chr1_2:5474142-5474161 None:intergenic 25.0%
! TCAGACATAATGTATATTAC+AGG + chr1_2:5474143-5474162 None:intergenic 25.0%
! AGTGAAAAAATTCAACATGT+AGG + chr1_2:5474268-5474287 None:intergenic 25.0%
! ACTACAAAATTTCATTGTGA+AGG - chr1_2:5474439-5474458 Msa0051360:intron 25.0%
!!! ATTTAGTTCCCTAATTTTGT+AGG + chr1_2:5474487-5474506 None:intergenic 25.0%
! GAGTTAAGAACGTTAAAATA+TGG + chr1_2:5474780-5474799 None:intergenic 25.0%
!!! GTATTTTTGTTGACAAAATG+AGG - chr1_2:5474990-5475009 Msa0051360:intron 25.0%
! GTCATAAATCGAAATAAAAG+AGG + chr1_2:5475018-5475037 None:intergenic 25.0%
! ACTCGTCAAATTATTTAAGA+CGG + chr1_2:5475168-5475187 None:intergenic 25.0%
! CAATGTGTAAAACATAATGA+AGG - chr1_2:5475191-5475210 Msa0051360:intron 25.0%
!! AAAGTTCTTTTTGTCAAGAA+GGG - chr1_2:5475321-5475340 Msa0051360:intron 25.0%
! GATAATCTCTCGAATTAATA+TGG - chr1_2:5475361-5475380 Msa0051360:intron 25.0%
!!! CTAATTTGGTGTATTATGAT+TGG - chr1_2:5475423-5475442 Msa0051360:intron 25.0%
! TTGTCCTTAAGATGTTTATA+TGG - chr1_2:5475451-5475470 Msa0051360:intron 25.0%
! TGAGAAAGAAATAAAGACAT+TGG + chr1_2:5475541-5475560 None:intergenic 25.0%
! AAGAGACTCATAAATTGTAT+AGG + chr1_2:5475573-5475592 None:intergenic 25.0%
!!! AGAAAATTTTGAGGTTAAGT+GGG + chr1_2:5475684-5475703 None:intergenic 25.0%
!!! AAGAAAATTTTGAGGTTAAG+TGG + chr1_2:5475685-5475704 None:intergenic 25.0%
!!! ATATACATGGATATTTTAGG+AGG + chr1_2:5475856-5475875 None:intergenic 25.0%
!! CACATATACATGGATATTTT+AGG + chr1_2:5475859-5475878 None:intergenic 25.0%
!! TTGTGAATTTATGCGTTTTA+AGG - chr1_2:5475947-5475966 Msa0051360:intron 25.0%
!!! TTCTAATTTTTTTGACGTAG+AGG + chr1_2:5476248-5476267 None:intergenic 25.0%
! AAACGAGAAATAATAAACGA+TGG - chr1_2:5476483-5476502 Msa0051360:intron 25.0%
! AAATCTTATGTTCGATTTCT+TGG + chr1_2:5476526-5476545 None:intergenic 25.0%
! AACCCTTTATAATCTTATGT+TGG + chr1_2:5476567-5476586 None:intergenic 25.0%
! AAAAAATTAGAAGCTAGTGA+TGG - chr1_2:5476597-5476616 Msa0051360:intron 25.0%
! AAAAATTAGAAGCTAGTGAT+GGG - chr1_2:5476598-5476617 Msa0051360:intron 25.0%
!!! CAAGAACTTGTTTTCTTATT+TGG - chr1_2:5477035-5477054 Msa0051360:intron 25.0%
! TTATTTGGTTGACTATTGTT+GGG - chr1_2:5477050-5477069 Msa0051360:intron 25.0%
! GATAATCTCTCGAATTAATA+TGG - chr1_2:5475361-5475380 Msa0051360:intron 25.0%
!!! CTAATTTGGTGTATTATGAT+TGG - chr1_2:5475423-5475442 Msa0051360:intron 25.0%
!!! TTCTAGTTTTTTTTGTCGTA+GGG + chr1_2:5477743-5477762 None:intergenic 25.0%
!!! TTTCTAGTTTTTTTTGTCGT+AGG + chr1_2:5477744-5477763 None:intergenic 25.0%
!! CAATGTTCATGTGTATTTTA+GGG + chr1_2:5477828-5477847 None:intergenic 25.0%
!! TCAATGTTCATGTGTATTTT+AGG + chr1_2:5477829-5477848 None:intergenic 25.0%
! ATGAATGAAATAAACAGAAC+AGG + chr1_2:5478267-5478286 None:intergenic 25.0%
! TTCATTCATTCATTCATTCA+TGG - chr1_2:5478278-5478297 Msa0051360:intron 25.0%
! ATTTGTTCAAGAGAATTAAG+TGG + chr1_2:5478499-5478518 None:intergenic 25.0%
!! TCTCTCATTCAATACAATTT+TGG - chr1_2:5478814-5478833 Msa0051360:CDS 25.0%
!! CAAGTACATGATTTAAAACA+AGG + chr1_2:5478955-5478974 None:intergenic 25.0%
!!! CTTGTTTTAAATCATGTACT+TGG - chr1_2:5478953-5478972 Msa0051360:CDS 25.0%
! TTCCTTGTATTTAAGTACAA+TGG - chr1_2:5479317-5479336 Msa0051360:intron 25.0%
!!! TTTCTAGAGTGTTCATATTT+GGG - chr1_2:5479641-5479660 Msa0051360:intron 25.0%
!!! TTTTTAAATAATGGGAACTG+TGG - chr1_2:5479894-5479913 Msa0051360:intron 25.0%
! ATAAGGAAAAGAAAAGGAAA+TGG - chr1_2:5480023-5480042 Msa0051360:intron 25.0%
! AAAAGAAAAGGAAATGGATA+AGG - chr1_2:5480029-5480048 Msa0051360:intron 25.0%
!!! TTTGAGGTTTTAATCTTTGA+TGG - chr1_2:5480476-5480495 Msa0051360:intron 25.0%
!!! TCTTATTTTGTCGAAAAATG+CGG - chr1_2:5480524-5480543 Msa0051360:intron 25.0%
!!! GTAGCTAACCATTTTTTTTT+TGG - chr1_2:5480936-5480955 Msa0051360:CDS 25.0%
! AATGAAAAAAGAAAAGTGGT+TGG + chr1_2:5480976-5480995 None:intergenic 25.0%
!! AATACTACTTCTCTTCATTT+TGG - chr1_2:5481373-5481392 Msa0051360:intron 25.0%
! CTTTAAATAGGAAACATTTG+AGG + chr1_2:5482066-5482085 None:intergenic 25.0%
! ACGACCAATAAACTTTAAAT+AGG + chr1_2:5482078-5482097 None:intergenic 25.0%
CAAGTAAAATTGGAAGCAAA+TGG - chr1_2:5467479-5467498 Msa0051360:CDS 30.0%
AGTAAAATTGGAAGCAAATG+GGG - chr1_2:5467481-5467500 Msa0051360:CDS 30.0%
TCAAAAGCTAAATGTGTGTT+TGG - chr1_2:5467528-5467547 Msa0051360:CDS 30.0%
TAAATGTGTGTTTGGATTGA+TGG - chr1_2:5467536-5467555 Msa0051360:CDS 30.0%
!! GTTTTGGTAAAACTACAGTT+TGG - chr1_2:5467581-5467600 Msa0051360:CDS 30.0%
! TTTAGAGTATGTTTGGATGA+AGG - chr1_2:5467728-5467747 Msa0051360:intron 30.0%
TTAGAGTATGTTTGGATGAA+GGG - chr1_2:5467729-5467748 Msa0051360:intron 30.0%
TATGTTTGGATGAAAGTTCT+CGG + chr1_2:5467927-5467946 None:intergenic 30.0%
ATACATGATACTGGAAATTG+AGG + chr1_2:5468146-5468165 None:intergenic 30.0%
CTTGTTTAGATACATGATAC+TGG + chr1_2:5468155-5468174 None:intergenic 30.0%
!! ATGATGTCAATTTGTTGCTT+TGG - chr1_2:5468178-5468197 Msa0051360:intron 30.0%
AATCATCTGTTCTTTCATCA+TGG - chr1_2:5468363-5468382 Msa0051360:intron 30.0%
GGAGATCATCATTTACAATA+TGG - chr1_2:5468402-5468421 Msa0051360:intron 30.0%
TTCAACTTCGATGATATTGA+AGG - chr1_2:5468537-5468556 Msa0051360:intron 30.0%
AAACCTATCCAATTATGAGT+TGG - chr1_2:5468674-5468693 Msa0051360:CDS 30.0%
TAACCAACTCATAATTGGAT+AGG + chr1_2:5468680-5468699 None:intergenic 30.0%
GTTTCTCTGATCATACTAAT+TGG + chr1_2:5468705-5468724 None:intergenic 30.0%
GGAAATAGTAATGAAGTTGA+AGG - chr1_2:5468780-5468799 Msa0051360:CDS 30.0%
! AGACAAGTATCAGTTTTCTA+GGG + chr1_2:5468866-5468885 None:intergenic 30.0%
! TAGACAAGTATCAGTTTTCT+AGG + chr1_2:5468867-5468886 None:intergenic 30.0%
! TAAGCTCTGGCATAAATATA+AGG + chr1_2:5468914-5468933 None:intergenic 30.0%
AAAAGAGGACGTAAATGATT+GGG + chr1_2:5469079-5469098 None:intergenic 30.0%
TAAAGGGAGAAACACTATTT+GGG + chr1_2:5469250-5469269 None:intergenic 30.0%
ATAAAGGGAGAAACACTATT+TGG + chr1_2:5469251-5469270 None:intergenic 30.0%
TTAGTATCAGTATGGATGTA+TGG + chr1_2:5469351-5469370 None:intergenic 30.0%
AAATGTCATAGCAGTAGAAA+AGG + chr1_2:5469682-5469701 None:intergenic 30.0%
TGAATCTAAAAGTTTGAGCA+AGG + chr1_2:5469798-5469817 None:intergenic 30.0%
TGTGACATCGAAAATTGATA+TGG + chr1_2:5470007-5470026 None:intergenic 30.0%
ATAATCTTTGTCTTGCAGTT+TGG + chr1_2:5470034-5470053 None:intergenic 30.0%
!! GCATATATCTGGAAGTATTA+TGG + chr1_2:5470315-5470334 None:intergenic 30.0%
TTGAATTCAATGGCTAAAAC+AGG + chr1_2:5470418-5470437 None:intergenic 30.0%
AAAAGCTTCCCATAAAAAGA+CGG - chr1_2:5470492-5470511 Msa0051360:intron 30.0%
! CAATATAATTTGCCATCTAG+TGG + chr1_2:5470540-5470559 None:intergenic 30.0%
! CAATATAATTTGCCATCTAG+TGG + chr1_2:5470540-5470559 None:intergenic 30.0%
! AAGGTAGAAACTTTTACAGA+AGG + chr1_2:5470773-5470792 None:intergenic 30.0%
GACTGAAGTCATAATTTGAA+AGG + chr1_2:5470792-5470811 None:intergenic 30.0%
!! CGTGATAATGACATCAATTT+TGG - chr1_2:5471256-5471275 Msa0051360:intron 30.0%
ACAGATCAATCAATCTCAAA+TGG - chr1_2:5471437-5471456 Msa0051360:intron 30.0%
!!! TCTCAAATGGAGATTTTTTG+TGG - chr1_2:5471450-5471469 Msa0051360:intron 30.0%
GATTGTCTATAACATTCAGT+AGG - chr1_2:5471628-5471647 Msa0051360:intron 30.0%
! AAGGTTGATCATATTCTGAT+TGG - chr1_2:5471783-5471802 Msa0051360:intron 30.0%
! GATCATATTCTGATTGGTTA+AGG - chr1_2:5471789-5471808 Msa0051360:intron 30.0%
! ATATTCTGATTGGTTAAGGT+TGG - chr1_2:5471793-5471812 Msa0051360:intron 30.0%
! CTTTATGACTTTGTTATGTG+TGG - chr1_2:5471982-5472001 Msa0051360:intron 30.0%
AGCATGAAAATAATGCATAG+CGG - chr1_2:5472339-5472358 Msa0051360:intron 30.0%
! ATGCTCTAAGTAAATTGAGA+GGG + chr1_2:5472523-5472542 None:intergenic 30.0%
TTACTTAGAGCATGTTTGTT+TGG - chr1_2:5472530-5472549 Msa0051360:intron 30.0%
TACTTAGAGCATGTTTGTTT+GGG - chr1_2:5472531-5472550 Msa0051360:intron 30.0%
ACCCTTGTAAAATGAATCTT+CGG - chr1_2:5472857-5472876 Msa0051360:intron 30.0%
TCACTAATTGAATCCTCAAA+CGG - chr1_2:5473057-5473076 Msa0051360:intron 30.0%
TACTAGTTGAACTAAGCTTA+TGG - chr1_2:5473201-5473220 Msa0051360:intron 30.0%
ACAACAATAAAGAAAAGGAG+CGG + chr1_2:5473305-5473324 None:intergenic 30.0%
TATTGTTGTAAAAAGATCGG+AGG - chr1_2:5473316-5473335 Msa0051360:intron 30.0%
ATTGTTGTAAAAAGATCGGA+GGG - chr1_2:5473317-5473336 Msa0051360:intron 30.0%
TCATCCGCAAATTATAAAAG+AGG + chr1_2:5473409-5473428 None:intergenic 30.0%
!!! GATACTATTTTGATGTGTGA+TGG - chr1_2:5473427-5473446 Msa0051360:intron 30.0%
TATGTGAAGCTTAGAATGAA+TGG - chr1_2:5473481-5473500 Msa0051360:intron 30.0%
!!! GATACTATTTTGATGTGTGA+TGG + chr1_2:5473427-5473446 None:intergenic 30.0%
! TATATGATTAGTTGAGACAG+TGG - chr1_2:5473544-5473563 Msa0051360:intron 30.0%
CCGAAATTATAAGCTAGTAA+TGG - chr1_2:5473608-5473627 Msa0051360:intron 30.0%
! AATTATAAGCTAGTAATGGG+TGG - chr1_2:5473612-5473631 Msa0051360:intron 30.0%
! TATGATTTGGAGTTACTTCA+AGG - chr1_2:5473784-5473803 Msa0051360:intron 30.0%
! ATGATTTGGAGTTACTTCAA+GGG - chr1_2:5473785-5473804 Msa0051360:intron 30.0%
AAAGATGGTCTGAATAGAAA+AGG - chr1_2:5473820-5473839 Msa0051360:intron 30.0%
AAGATGGTCTGAATAGAAAA+GGG - chr1_2:5473821-5473840 Msa0051360:intron 30.0%
GAAAATTCTCATACGCAAAT+AGG - chr1_2:5474026-5474045 Msa0051360:intron 30.0%
GTGTGCTAAATAAAATTAGG+AGG + chr1_2:5474069-5474088 None:intergenic 30.0%
TTATTTAGCACACTACTAAC+GGG - chr1_2:5474076-5474095 Msa0051360:intron 30.0%
TAGACTACGCGTATATTATA+GGG + chr1_2:5474236-5474255 None:intergenic 30.0%
TTAGACTACGCGTATATTAT+AGG + chr1_2:5474237-5474256 None:intergenic 30.0%
TAGTCATGCCTACAAAATTA+GGG - chr1_2:5474476-5474495 Msa0051360:intron 30.0%
GAGCTCAAAATTCGATTTAT+AGG - chr1_2:5474655-5474674 Msa0051360:intron 30.0%
ACTCTTTATGCATATGAACT+TGG - chr1_2:5475223-5475242 Msa0051360:intron 30.0%
! CAAAGTTCTTTTTGTCAAGA+AGG - chr1_2:5475320-5475339 Msa0051360:intron 30.0%
! AAGTTCTTTTTGTCAAGAAG+GGG - chr1_2:5475322-5475341 Msa0051360:intron 30.0%
!!! GTGTTTTGATGATGATTTGT+TGG - chr1_2:5475383-5475402 Msa0051360:intron 30.0%
AGCTGGTAAGAAATCTAATT+TGG - chr1_2:5475409-5475428 Msa0051360:intron 30.0%
GCTACCATATAAACATCTTA+AGG + chr1_2:5475458-5475477 None:intergenic 30.0%
CATAAATTGTATAGGCTCAT+CGG + chr1_2:5475565-5475584 None:intergenic 30.0%
AGTCAGACACAAAAAATACA+TGG - chr1_2:5475724-5475743 Msa0051360:intron 30.0%
!! TTACGTATTCGATTTTGAGT+AGG + chr1_2:5476306-5476325 None:intergenic 30.0%
!! TAGTGATCCAGTTTTGATAA+GGG - chr1_2:5476704-5476723 Msa0051360:intron 30.0%
TTTGATAAGGGATTTGGAAA+AGG - chr1_2:5476716-5476735 Msa0051360:intron 30.0%
! TATGATTTGGAGTTACTTCA+AGG - chr1_2:5473784-5473803 Msa0051360:intron 30.0%
! ATGATTTGGAGTTACTTCAA+GGG - chr1_2:5473785-5473804 Msa0051360:intron 30.0%
GTTAGCAACTAAAGAAGATT+TGG - chr1_2:5476799-5476818 Msa0051360:intron 30.0%
AACACAAGACATATCATGAA+TGG + chr1_2:5476845-5476864 None:intergenic 30.0%
CAAGGTGTAAAACATAATGA+AGG - chr1_2:5476962-5476981 Msa0051360:intron 30.0%
TCTCTTTATGCATATGAACT+TGG - chr1_2:5476994-5477013 Msa0051360:intron 30.0%
CTTATTTGGTTGACTATTGT+TGG - chr1_2:5477049-5477068 Msa0051360:intron 30.0%
!!! GTGTTTTGATGATGATTTGT+TGG - chr1_2:5475383-5475402 Msa0051360:intron 30.0%
!! TCGTCTTTAAGATGTTTATC+TGG - chr1_2:5477228-5477247 Msa0051360:intron 30.0%
AGAGAGAGAAATAAAGTCAA+TGG + chr1_2:5477318-5477337 None:intergenic 30.0%
! CATAAATTTTATACGCACGT+CGG + chr1_2:5477342-5477361 None:intergenic 30.0%
ATATGTCAGAGTAAGATCTT+GGG - chr1_2:5477432-5477451 Msa0051360:intron 30.0%
AGTCACACCCAAAAAATATA+TGG - chr1_2:5477500-5477519 Msa0051360:intron 30.0%
!! CTCAAGTGTGTGTTATTTAA+AGG - chr1_2:5477579-5477598 Msa0051360:intron 30.0%
!!! TAGTTTTGAACTTTTAACCG+CGG - chr1_2:5477985-5478004 Msa0051360:intron 30.0%
TGTAAACAAAACGAAAATGG+AGG - chr1_2:5478046-5478065 Msa0051360:CDS 30.0%
TTTAAGCAGTTCACAAGAAA+CGG + chr1_2:5478174-5478193 None:intergenic 30.0%
! ATGAAATGGTTCAAAGGTTT+TGG + chr1_2:5478236-5478255 None:intergenic 30.0%
TTCATTCATTCATTCATGGA+AGG - chr1_2:5478286-5478305 Msa0051360:intron 30.0%
AATGATTTCCTCCAATGATT+TGG + chr1_2:5478335-5478354 None:intergenic 30.0%
CATTGGAGGAAATCATTTAT+TGG - chr1_2:5478338-5478357 Msa0051360:CDS 30.0%
GAAATGGATGAACTGAAAAT+GGG + chr1_2:5478365-5478384 None:intergenic 30.0%
TGAAATGGATGAACTGAAAA+TGG + chr1_2:5478366-5478385 None:intergenic 30.0%
!! TACAAGTTGATGGTGAAAAT+GGG + chr1_2:5478407-5478426 None:intergenic 30.0%
!! TTACAAGTTGATGGTGAAAA+TGG + chr1_2:5478408-5478427 None:intergenic 30.0%
! GACATTTATACTTTTGTTGC+AGG - chr1_2:5479121-5479140 Msa0051360:CDS 30.0%
GATACTATTTACTTCACGAA+CGG - chr1_2:5479251-5479270 Msa0051360:CDS 30.0%
CACCATTGTACTTAAATACA+AGG + chr1_2:5479322-5479341 None:intergenic 30.0%
ACAGTTCACCTGAAAAATTA+TGG - chr1_2:5479456-5479475 Msa0051360:intron 30.0%
CAGTTCACCTGAAAAATTAT+GGG - chr1_2:5479457-5479476 Msa0051360:intron 30.0%
AAAATTGGTGTGAAGCAATA+GGG + chr1_2:5479525-5479544 None:intergenic 30.0%
AACAAGTTGTCGTTCAAAAT+TGG + chr1_2:5479540-5479559 None:intergenic 30.0%
AAGGAAAGAAAAAGAGGTAA+AGG + chr1_2:5479585-5479604 None:intergenic 30.0%
! TTTTTCATTCATGTGGAACA+TGG + chr1_2:5479608-5479627 None:intergenic 30.0%
! CAAATATGAACACTCTAGAA+AGG + chr1_2:5479642-5479661 None:intergenic 30.0%
!! CTTTCTAGAGTGTTCATATT+TGG - chr1_2:5479640-5479659 Msa0051360:intron 30.0%
!! GATTTTAGTGCAGTTTTTCT+TGG - chr1_2:5480053-5480072 Msa0051360:intron 30.0%
CATGTACTTGAGATGATTAA+TGG - chr1_2:5480120-5480139 Msa0051360:intron 30.0%
!! ACTAGATATTCGTATTGACT+GGG + chr1_2:5480850-5480869 None:intergenic 30.0%
GATGTTCATACATGATGTAT+CGG - chr1_2:5481026-5481045 Msa0051360:CDS 30.0%
TTATGTCATCCTTCACAAAT+AGG + chr1_2:5481274-5481293 None:intergenic 30.0%
AAGAGAAGTAGTATTATCGA+TGG + chr1_2:5481368-5481387 None:intergenic 30.0%
TTTAATAGCCATTAAGGGAA+AGG + chr1_2:5481399-5481418 None:intergenic 30.0%
GACAGTTTAATAGCCATTAA+GGG + chr1_2:5481404-5481423 None:intergenic 30.0%
AGACAGTTTAATAGCCATTA+AGG + chr1_2:5481405-5481424 None:intergenic 30.0%
! CTTTAGTTCAAACATTCACA+AGG + chr1_2:5481495-5481514 None:intergenic 30.0%
TAAGCTCTGTTATGAATATC+TGG + chr1_2:5481663-5481682 None:intergenic 30.0%
AAATGAGGAGGAAAATGATT+GGG + chr1_2:5481828-5481847 None:intergenic 30.0%
AACAAAATATGGAAATGAGG+AGG + chr1_2:5481840-5481859 None:intergenic 30.0%
CAATAACAATTGGTACTTCT+TGG + chr1_2:5481979-5481998 None:intergenic 30.0%
ACCAAAGAGAGAGAGATTAA+TGG - chr1_2:5467229-5467248 Msa0051360:intron 35.0%
CCAAAGAGAGAGAGATTAAT+GGG - chr1_2:5467230-5467249 Msa0051360:intron 35.0%
!! ATTAATGGGTTGTGAGTGTA+AGG - chr1_2:5467244-5467263 Msa0051360:intron 35.0%
!! TTAATGGGTTGTGAGTGTAA+GGG - chr1_2:5467245-5467264 Msa0051360:intron 35.0%
TTAAAGAGGTGATAGAAGTG+AGG + chr1_2:5467290-5467309 None:intergenic 35.0%
AGAAATTACCAGAGATTGAG+AGG + chr1_2:5467324-5467343 None:intergenic 35.0%
TGGTGACTTTGACGAAATTA+CGG - chr1_2:5467556-5467575 Msa0051360:CDS 35.0%
! TATGTTTGGATGAAGGGTTT+TGG - chr1_2:5467735-5467754 Msa0051360:intron 35.0%
! TTCTCAGCTTTGTATATGCT+GGG + chr1_2:5467987-5468006 None:intergenic 35.0%
! TTTCTCAGCTTTGTATATGC+TGG + chr1_2:5467988-5468007 None:intergenic 35.0%
TTTGGTAAAGTTAGGGCTAT+CGG + chr1_2:5468033-5468052 None:intergenic 35.0%
! ATTTGATGGACAAAACCATC+TGG + chr1_2:5468264-5468283 None:intergenic 35.0%
!!! AGATGGTTTTGTCCATCAAA+TGG - chr1_2:5468263-5468282 Msa0051360:intron 35.0%
!! TGCGGATTAGTTTCATTAAC+TGG - chr1_2:5468297-5468316 Msa0051360:intron 35.0%
ATCTGTTCTTTCATCATGGA+TGG - chr1_2:5468367-5468386 Msa0051360:intron 35.0%
! TTTACAATATGGCGACCTTT+TGG - chr1_2:5468413-5468432 Msa0051360:intron 35.0%
!!! CTTTTGGTTTTCAGATACGA+GGG - chr1_2:5468429-5468448 Msa0051360:intron 35.0%
GTGATGTTCAGAAGAAAATG+AGG - chr1_2:5468604-5468623 Msa0051360:CDS 35.0%
TGGTCTAACCAACTCATAAT+TGG + chr1_2:5468685-5468704 None:intergenic 35.0%
TTCCTGTTTGAAAAGGAACA+TGG + chr1_2:5468764-5468783 None:intergenic 35.0%
GAAAAGAGGACGTAAATGAT+TGG + chr1_2:5469080-5469099 None:intergenic 35.0%
ATCAAAACCTTCAATGTCAG+TGG - chr1_2:5469117-5469136 Msa0051360:intron 35.0%
ATATGAACCACTGACATTGA+AGG + chr1_2:5469127-5469146 None:intergenic 35.0%
ATCTTCTTGAGAAACTGATC+TGG - chr1_2:5469204-5469223 Msa0051360:intron 35.0%
AGTGTTTCTCCCTTTATGTA+TGG - chr1_2:5469254-5469273 Msa0051360:intron 35.0%
TACCATCCTCCATACATAAA+GGG + chr1_2:5469266-5469285 None:intergenic 35.0%
TTACCATCCTCCATACATAA+AGG + chr1_2:5469267-5469286 None:intergenic 35.0%
ACTAGGACTTAGTATCAGTA+TGG + chr1_2:5469359-5469378 None:intergenic 35.0%
AGAATAGTTCAAATCTACCC+AGG + chr1_2:5469393-5469412 None:intergenic 35.0%
TGGAGTGATCTTTCAATACT+TGG - chr1_2:5469436-5469455 Msa0051360:intron 35.0%
TAGAAAAGGTCTCAAACTTG+GGG + chr1_2:5469668-5469687 None:intergenic 35.0%
GTAGAAAAGGTCTCAAACTT+GGG + chr1_2:5469669-5469688 None:intergenic 35.0%
AGTAGAAAAGGTCTCAAACT+TGG + chr1_2:5469670-5469689 None:intergenic 35.0%
GACAAGAGTAGTAGTAGAAA+AGG + chr1_2:5469776-5469795 None:intergenic 35.0%
ATAATTTGAAGGGAGAACAC+TGG - chr1_2:5470059-5470078 Msa0051360:CDS 35.0%
AGGTTTCTTTGGCATATATC+TGG + chr1_2:5470326-5470345 None:intergenic 35.0%
! GAGCTAACTTTAGGTTTCTT+TGG + chr1_2:5470337-5470356 None:intergenic 35.0%
GCCATTGAATTCAAGAAATC+CGG - chr1_2:5470424-5470443 Msa0051360:intron 35.0%
ACCGGATTTCTTGAATTCAA+TGG + chr1_2:5470428-5470447 None:intergenic 35.0%
TTCAACTACTTCGAAGAAGA+TGG - chr1_2:5470453-5470472 Msa0051360:intron 35.0%
TCAACTACTTCGAAGAAGAT+GGG - chr1_2:5470454-5470473 Msa0051360:intron 35.0%
!!! TTATGGGAAGCTTTTGACTT+GGG + chr1_2:5470487-5470506 None:intergenic 35.0%
!! TTTATGGGAAGCTTTTGACT+TGG + chr1_2:5470488-5470507 None:intergenic 35.0%
AAAGCTTCCCATAAAAAGAC+GGG - chr1_2:5470493-5470512 Msa0051360:intron 35.0%
! AACCTTACCCGTCTTTTTAT+GGG + chr1_2:5470503-5470522 None:intergenic 35.0%
! AAACCTTACCCGTCTTTTTA+TGG + chr1_2:5470504-5470523 None:intergenic 35.0%
ATATCATAAGTCCCACTAGA+TGG - chr1_2:5470572-5470591 Msa0051360:intron 35.0%
ATGAAGAAGTTCAATGTCAG+TGG - chr1_2:5470971-5470990 Msa0051360:intron 35.0%
! AAGCGTAACTTCTGTTTTGT+AGG + chr1_2:5471140-5471159 None:intergenic 35.0%
! AGAACAATTCACACCTTTTG+TGG - chr1_2:5471214-5471233 Msa0051360:intron 35.0%
! GAACAATTCACACCTTTTGT+GGG - chr1_2:5471215-5471234 Msa0051360:intron 35.0%
! AACAATTCACACCTTTTGTG+GGG - chr1_2:5471216-5471235 Msa0051360:intron 35.0%
GATGTCATTATCACGAACAA+AGG + chr1_2:5471251-5471270 None:intergenic 35.0%
AAGGTCTTGACCATCAAATT+GGG - chr1_2:5471347-5471366 Msa0051360:intron 35.0%
TAGCGATGATACAACTAACT+GGG + chr1_2:5471539-5471558 None:intergenic 35.0%
TTAGCGATGATACAACTAAC+TGG + chr1_2:5471540-5471559 None:intergenic 35.0%
! CTCATGTTAAGTGTCATTCA+AGG - chr1_2:5471698-5471717 Msa0051360:intron 35.0%
! AGGCTATAGTAGTATTGAAC+CGG + chr1_2:5471885-5471904 None:intergenic 35.0%
!!! ATAGCCTTTTTTGGTCACAT+TGG - chr1_2:5471898-5471917 Msa0051360:intron 35.0%
AGGAAGAGTGAAGAGAAATT+TGG - chr1_2:5472021-5472040 Msa0051360:intron 35.0%
GGAAGAGTGAAGAGAAATTT+GGG - chr1_2:5472022-5472041 Msa0051360:intron 35.0%
TGCATACACTTATGGTTCAA+CGG + chr1_2:5472073-5472092 None:intergenic 35.0%
!! GGTTGTTTTGCATACACTTA+TGG + chr1_2:5472081-5472100 None:intergenic 35.0%
ACAAACATGCTCAAAATCCA+GGG + chr1_2:5472102-5472121 None:intergenic 35.0%
AACAAACATGCTCAAAATCC+AGG + chr1_2:5472103-5472122 None:intergenic 35.0%
!! GATTTTGAGCATGTTTGTTG+AGG - chr1_2:5472104-5472123 Msa0051360:intron 35.0%
! AGTGCATTTTTCTTAAGCGA+TGG + chr1_2:5472372-5472391 None:intergenic 35.0%
! TGAAATGGTTGTCCTTTTCT+TGG + chr1_2:5472435-5472454 None:intergenic 35.0%
AGAAAAGGACAACCATTTCA+TGG - chr1_2:5472435-5472454 Msa0051360:intron 35.0%
GAAAAGGACAACCATTTCAT+GGG - chr1_2:5472436-5472455 Msa0051360:intron 35.0%
AATTGAGAGGGTTATTCTAC+CGG + chr1_2:5472511-5472530 None:intergenic 35.0%
! CATGCTCTAAGTAAATTGAG+AGG + chr1_2:5472524-5472543 None:intergenic 35.0%
! CCCGAAGATTCATTTTACAA+GGG + chr1_2:5472861-5472880 None:intergenic 35.0%
CCCTTGTAAAATGAATCTTC+GGG - chr1_2:5472858-5472877 Msa0051360:intron 35.0%
! ACCCGAAGATTCATTTTACA+AGG + chr1_2:5472862-5472881 None:intergenic 35.0%
CAATGCATATGGGTGATAAA+AGG - chr1_2:5472883-5472902 Msa0051360:intron 35.0%
GTGGTAGAAAAAAAGAGAGT+AGG - chr1_2:5473092-5473111 Msa0051360:intron 35.0%
AAAAAAGAGAGTAGGAGAAG+CGG - chr1_2:5473100-5473119 Msa0051360:intron 35.0%
AACAATAAAGAAAAGGAGCG+GGG + chr1_2:5473303-5473322 None:intergenic 35.0%
CAACAATAAAGAAAAGGAGC+GGG + chr1_2:5473304-5473323 None:intergenic 35.0%
CAATCTAGTGATCCACTTTA+TGG - chr1_2:5473709-5473728 Msa0051360:intron 35.0%
TAGTGATCCACTTTATGGTA+AGG - chr1_2:5473714-5473733 Msa0051360:intron 35.0%
AGTGATCCACTTTATGGTAA+GGG - chr1_2:5473715-5473734 Msa0051360:intron 35.0%
!! TATGGTAAGGGCTTTGAAAA+AGG - chr1_2:5473727-5473746 Msa0051360:intron 35.0%
!! ATCATAACCTTAGCCTTAGA+CGG + chr1_2:5473770-5473789 None:intergenic 35.0%
CTAAGGCTAAGGTTATGATT+TGG - chr1_2:5473771-5473790 Msa0051360:intron 35.0%
AGCACAAGACATATCATGAA+TGG + chr1_2:5473856-5473875 None:intergenic 35.0%
TCACGTAATATTGAAGCTCA+GGG - chr1_2:5473883-5473902 Msa0051360:intron 35.0%
!!! AAGTGTGTTAATGGGCTTTT+GGG + chr1_2:5473980-5473999 None:intergenic 35.0%
!!! TAAGTGTGTTAATGGGCTTT+TGG + chr1_2:5473981-5474000 None:intergenic 35.0%
CTAGTCATGCCTACAAAATT+AGG - chr1_2:5474475-5474494 Msa0051360:intron 35.0%
CTTGTGAGTATAAACTTACG+CGG - chr1_2:5474511-5474530 Msa0051360:intron 35.0%
!!! CAATCTCTTCGTTGCTTTTT+TGG - chr1_2:5474825-5474844 Msa0051360:intron 35.0%
CAGACTTCACGTATATTACA+TGG - chr1_2:5474936-5474955 Msa0051360:intron 35.0%
!!! TTTGCGATAACTTTTTTGCC+CGG - chr1_2:5475064-5475083 Msa0051360:intron 35.0%
TCTTGTCAAACACTTATTCG+AGG + chr1_2:5475249-5475268 None:intergenic 35.0%
! TTATTTCGTCGACTATCGTT+GGG - chr1_2:5475278-5475297 Msa0051360:intron 35.0%
TCAACGTGATCACATATACA+TGG + chr1_2:5475869-5475888 None:intergenic 35.0%
CTTCACTTCATCTATGTCTA+CGG - chr1_2:5476034-5476053 Msa0051360:intron 35.0%
!! CTAGTGATCCAGTTTTGATA+AGG - chr1_2:5476703-5476722 Msa0051360:intron 35.0%
!! TCCAGTTTTGATAAGGGATT+TGG - chr1_2:5476710-5476729 Msa0051360:intron 35.0%
TCCAAATCCCTTATCAAAAC+TGG + chr1_2:5476714-5476733 None:intergenic 35.0%
GTAACTCCAAATCATAACCT+TGG + chr1_2:5473780-5473799 None:intergenic 35.0%
AAAGAAGATTTGGCTAGAAC+AGG - chr1_2:5476809-5476828 Msa0051360:intron 35.0%
AAGAAGATTTGGCTAGAACA+GGG - chr1_2:5476810-5476829 Msa0051360:intron 35.0%
ACAAGACATATCATGAATGG+TGG + chr1_2:5473853-5473872 None:intergenic 35.0%
TTGACTATTGTTGGGTTCTT+TGG - chr1_2:5477058-5477077 Msa0051360:intron 35.0%
TATTGTTGGGTTCTTTGGTT+GGG - chr1_2:5477063-5477082 Msa0051360:intron 35.0%
GATATGTCAGAGTAAGATCT+TGG - chr1_2:5477431-5477450 Msa0051360:intron 35.0%
!!! GGTGCGACCATATATTTTTT+GGG + chr1_2:5477510-5477529 None:intergenic 35.0%
! GATACGAACACGAGTAATTT+TGG + chr1_2:5477552-5477571 None:intergenic 35.0%
GAGAGAATGAAATGGTTCAA+AGG + chr1_2:5478242-5478261 None:intergenic 35.0%
AACAGGATGAGAGAATGAAA+TGG + chr1_2:5478250-5478269 None:intergenic 35.0%
! TGCATGTACTTACAAGTTGA+TGG + chr1_2:5478417-5478436 None:intergenic 35.0%
AACTCGCAAACAAAGTCTAA+AGG + chr1_2:5478599-5478618 None:intergenic 35.0%
! TTAGACTTTGTTTGCGAGTT+TGG - chr1_2:5478599-5478618 Msa0051360:intron 35.0%
! GAAGGGAAAATAGGGTTTTA+GGG - chr1_2:5478626-5478645 Msa0051360:intron 35.0%
!! AAGGGAAAATAGGGTTTTAG+GGG - chr1_2:5478627-5478646 Msa0051360:intron 35.0%
ATATTCCACACAATTTCGCT+AGG + chr1_2:5479212-5479231 None:intergenic 35.0%
AGCGAAATTGTGTGGAATAT+AGG - chr1_2:5479212-5479231 Msa0051360:CDS 35.0%
GCGAAATTGTGTGGAATATA+GGG - chr1_2:5479213-5479232 Msa0051360:CDS 35.0%
AATATAGGGCTTACAACTAG+AGG - chr1_2:5479227-5479246 Msa0051360:CDS 35.0%
AAGGAAATCATTCTGCTTCA+AGG + chr1_2:5479303-5479322 None:intergenic 35.0%
TGGAAATACTTTCTGTGAGA+AGG - chr1_2:5479370-5479389 Msa0051360:intron 35.0%
TTCACCTGAAAAATTATGGG+CGG - chr1_2:5479460-5479479 Msa0051360:intron 35.0%
CAAAATTGGTGTGAAGCAAT+AGG + chr1_2:5479526-5479545 None:intergenic 35.0%
ACATGGAAGGAAAGAAAAAG+AGG + chr1_2:5479591-5479610 None:intergenic 35.0%
ATTGGATACGCTGTTAAAGT+TGG - chr1_2:5479825-5479844 Msa0051360:intron 35.0%
ATGAGTTTACATTGCAAGAG+AGG - chr1_2:5479982-5480001 Msa0051360:intron 35.0%
!! ACCATGTTTTTGTGGCTATA+AGG - chr1_2:5480006-5480025 Msa0051360:intron 35.0%
TCCTTATAGCCACAAAAACA+TGG + chr1_2:5480010-5480029 None:intergenic 35.0%
GTGGCTATAAGGAAAAGAAA+AGG - chr1_2:5480017-5480036 Msa0051360:intron 35.0%
ATATTCCATGTAACTCCACT+AGG + chr1_2:5480338-5480357 None:intergenic 35.0%
GTGGAGTTACATGGAATATA+AGG - chr1_2:5480339-5480358 Msa0051360:intron 35.0%
TTCCTTGTCTGTAAGTACAA+TGG - chr1_2:5480443-5480462 Msa0051360:intron 35.0%
ATCACCAAAAGCTGCTAATT+GGG - chr1_2:5480730-5480749 Msa0051360:CDS 35.0%
! CACTAGATATTCGTATTGAC+TGG + chr1_2:5480851-5480870 None:intergenic 35.0%
GGAGAGAGGAATATATATAG+AGG + chr1_2:5481133-5481152 None:intergenic 35.0%
!! TCGAGATAAAAGTGCTTAGT+TGG + chr1_2:5481191-5481210 None:intergenic 35.0%
! TCTCGAGTGTTGTCAAATAT+CGG - chr1_2:5481205-5481224 Msa0051360:intron 35.0%
!!! GTGGTGGATTTTTTAACAAC+CGG - chr1_2:5481243-5481262 Msa0051360:intron 35.0%
AGAAGTAGTATTATCGATGG+CGG + chr1_2:5481365-5481384 None:intergenic 35.0%
TAGTTCAAACATTCACAAGG+AGG + chr1_2:5481492-5481511 None:intergenic 35.0%
TTGGGCTATAAGAAAAGTCA+AGG + chr1_2:5481528-5481547 None:intergenic 35.0%
CAGAATGAAATCAAATGCAG+TGG + chr1_2:5481556-5481575 None:intergenic 35.0%
! CACTGCATTTGATTTCATTC+TGG - chr1_2:5481554-5481573 Msa0051360:intron 35.0%
!! AGACAAGTATCAGTTTGCTA+GGG + chr1_2:5481615-5481634 None:intergenic 35.0%
! TAGACAAGTATCAGTTTGCT+AGG + chr1_2:5481616-5481635 None:intergenic 35.0%
TAGCAAACTGATACTTGTCT+AGG - chr1_2:5481615-5481634 Msa0051360:intron 35.0%
GAAATGAGGAGGAAAATGAT+TGG + chr1_2:5481829-5481848 None:intergenic 35.0%
ATTAAAGCCTTCAATGTCAG+TGG - chr1_2:5481866-5481885 Msa0051360:intron 35.0%
ATAGGAAACATTTGAGGAGA+AGG + chr1_2:5482060-5482079 None:intergenic 35.0%
AAAATTTGAAGGGAGAACAC+TGG - chr1_2:5482254-5482273 Msa0051360:intron 35.0%
AGTAGTTACGAGGAGAAACA+CGG + chr1_2:5466942-5466961 None:intergenic 40.0%
CCCATTAATCTCTCTCTCTT+TGG + chr1_2:5467233-5467252 None:intergenic 40.0%
AGGTTGAAGAAGGGTTAAAG+AGG + chr1_2:5467304-5467323 None:intergenic 40.0%
GAGATTGAGAGGTTGAAGAA+GGG + chr1_2:5467313-5467332 None:intergenic 40.0%
AGAGATTGAGAGGTTGAAGA+AGG + chr1_2:5467314-5467333 None:intergenic 40.0%
TTCTTCAACCTCTCAATCTC+TGG - chr1_2:5467313-5467332 Msa0051360:intron 40.0%
TGACTTTGACGAAATTACGG+TGG - chr1_2:5467559-5467578 Msa0051360:CDS 40.0%
! TGACGAAATTACGGTGGTTT+TGG - chr1_2:5467565-5467584 Msa0051360:CDS 40.0%
TGAGTTTGACGAAATCACAG+TGG + chr1_2:5467628-5467647 None:intergenic 40.0%
ATTGCCAATCCAAACATGCA+CGG - chr1_2:5467647-5467666 Msa0051360:intron 40.0%
TTTGGATGAAAGTTCTCGGA+GGG + chr1_2:5467923-5467942 None:intergenic 40.0%
TCCAAACATACCCTTAAGCA+AGG - chr1_2:5467937-5467956 Msa0051360:intron 40.0%
! ACCTTGCTTAAGGGTATGTT+TGG + chr1_2:5467941-5467960 None:intergenic 40.0%
TAAGCCTTCACCTTGCTTAA+GGG + chr1_2:5467950-5467969 None:intergenic 40.0%
TTGGTAAAGTTAGGGCTATC+GGG + chr1_2:5468032-5468051 None:intergenic 40.0%
CATGATACTGGAAATTGAGG+AGG + chr1_2:5468143-5468162 None:intergenic 40.0%
TTAATGCAGAGAGTTCCAGA+TGG - chr1_2:5468246-5468265 Msa0051360:intron 40.0%
!!! TGGTTTTGTCCATCAAATGG+AGG - chr1_2:5468266-5468285 Msa0051360:intron 40.0%
!! GGTTTTGTCCATCAAATGGA+GGG - chr1_2:5468267-5468286 Msa0051360:intron 40.0%
GTTTCATTAACTGGTCCTAG+TGG - chr1_2:5468306-5468325 Msa0051360:intron 40.0%
ACTTGCCAAGTATTTCCACT+AGG + chr1_2:5468324-5468343 None:intergenic 40.0%
TCATGGATGGTCAACATTTG+TGG - chr1_2:5468380-5468399 Msa0051360:intron 40.0%
CATGGATGGTCAACATTTGT+GGG - chr1_2:5468381-5468400 Msa0051360:intron 40.0%
CCTCGTATCTGAAAACCAAA+AGG + chr1_2:5468431-5468450 None:intergenic 40.0%
!!! CCTTTTGGTTTTCAGATACG+AGG - chr1_2:5468428-5468447 Msa0051360:intron 40.0%
CATTTCACTGCGCAAGTATT+TGG - chr1_2:5468459-5468478 Msa0051360:intron 40.0%
ACTAGCTGAACATTCTTTGC+AGG + chr1_2:5468736-5468755 None:intergenic 40.0%
! GTCCATGTTCCTTTTCAAAC+AGG - chr1_2:5468759-5468778 Msa0051360:CDS 40.0%
CAGCAATCCTGTATAGAAGT+GGG - chr1_2:5468980-5468999 Msa0051360:CDS 40.0%
AATCCTGTATAGAAGTGGGA+AGG - chr1_2:5468984-5469003 Msa0051360:CDS 40.0%
GATGACCACGATATTCTTAG+CGG - chr1_2:5469009-5469028 Msa0051360:CDS 40.0%
TGTCAGTGGTTCATATACTC+TGG - chr1_2:5469131-5469150 Msa0051360:intron 40.0%
TCTTGAGAAACTGATCTGGT+TGG - chr1_2:5469208-5469227 Msa0051360:intron 40.0%
CTTGAGAAACTGATCTGGTT+GGG - chr1_2:5469209-5469228 Msa0051360:intron 40.0%
TTGAGAAACTGATCTGGTTG+GGG - chr1_2:5469210-5469229 Msa0051360:intron 40.0%
GTTTCTCCCTTTATGTATGG+AGG - chr1_2:5469257-5469276 Msa0051360:intron 40.0%
TCCTAGTTAATGAGTCAACC+TGG - chr1_2:5469372-5469391 Msa0051360:intron 40.0%
CCTAGTTAATGAGTCAACCT+GGG - chr1_2:5469373-5469392 Msa0051360:intron 40.0%
AGTGTGATGTAGAAGCTTCT+TGG + chr1_2:5469743-5469762 None:intergenic 40.0%
! TCAGCAAGAGCTTTGTGTTA+AGG + chr1_2:5469951-5469970 None:intergenic 40.0%
CTTGTATGCACTCTAGTTGT+TGG + chr1_2:5470100-5470119 None:intergenic 40.0%
CATACAAGTCACACTCTATG+TGG - chr1_2:5470112-5470131 Msa0051360:CDS 40.0%
CGTGGCAATAGCATAAAAGT+TGG - chr1_2:5470154-5470173 Msa0051360:CDS 40.0%
ATTGCTGAGGTTGGAAAAGA+TGG - chr1_2:5470226-5470245 Msa0051360:intron 40.0%
TTGCTGAGGTTGGAAAAGAT+GGG - chr1_2:5470227-5470246 Msa0051360:intron 40.0%
!!! TACAAGCTAGTTTTCCAACC+TGG + chr1_2:5470261-5470280 None:intergenic 40.0%
CTGCACTTTGAGCTAACTTT+AGG + chr1_2:5470346-5470365 None:intergenic 40.0%
CAACTACTTCGAAGAAGATG+GGG - chr1_2:5470455-5470474 Msa0051360:intron 40.0%
!!! TATGGGAAGCTTTTGACTTG+GGG + chr1_2:5470486-5470505 None:intergenic 40.0%
TTCCCATAAAAAGACGGGTA+AGG - chr1_2:5470498-5470517 Msa0051360:intron 40.0%
TGTCAGTGGATCATACACTT+TGG - chr1_2:5470985-5471004 Msa0051360:intron 40.0%
AGTGGATCATACACTTTGGT+GGG - chr1_2:5470989-5471008 Msa0051360:intron 40.0%
! TAACTTCTGTTTTGTAGGCG+GGG + chr1_2:5471135-5471154 None:intergenic 40.0%
! GTAACTTCTGTTTTGTAGGC+GGG + chr1_2:5471136-5471155 None:intergenic 40.0%
! CGTAACTTCTGTTTTGTAGG+CGG + chr1_2:5471137-5471156 None:intergenic 40.0%
CAGAGTTTACAATCCAACAC+TGG + chr1_2:5471177-5471196 None:intergenic 40.0%
! ACAATTCACACCTTTTGTGG+GGG - chr1_2:5471217-5471236 Msa0051360:intron 40.0%
CGTTTCTCATTATGTGATGC+AGG - chr1_2:5471300-5471319 Msa0051360:intron 40.0%
GTGATGCAGGTTCATATATC+CGG - chr1_2:5471313-5471332 Msa0051360:intron 40.0%
TGATGCAGGTTCATATATCC+GGG - chr1_2:5471314-5471333 Msa0051360:intron 40.0%
GAAGGTCTTGACCATCAAAT+TGG - chr1_2:5471346-5471365 Msa0051360:intron 40.0%
GTTTCACATGCCCAATTTGA+TGG + chr1_2:5471360-5471379 None:intergenic 40.0%
CAAGAACGTTAGCAAGTAGA+TGG + chr1_2:5471409-5471428 None:intergenic 40.0%
TGATACAACTAACTGGGATC+TGG + chr1_2:5471533-5471552 None:intergenic 40.0%
! ATCTACTAAGCCACTGCTTT+TGG - chr1_2:5471584-5471603 Msa0051360:intron 40.0%
ATGACAAGAACCAAAAGCAG+TGG + chr1_2:5471597-5471616 None:intergenic 40.0%
CTAGATCGCTGAACAAGTTA+AGG - chr1_2:5471764-5471783 Msa0051360:intron 40.0%
CTGCTCTAACATCTTTCATC+CGG - chr1_2:5471863-5471882 Msa0051360:intron 40.0%
!!! CCTTTTTTGGTCACATTGGA+GGG - chr1_2:5471902-5471921 Msa0051360:intron 40.0%
AAGTGTATGCAAAACAACCC+TGG - chr1_2:5472082-5472101 Msa0051360:intron 40.0%
TCATGCTCGATGAAGAAATG+TGG + chr1_2:5472326-5472345 None:intergenic 40.0%
AGAGAGTAGATCCCATGAAA+TGG + chr1_2:5472450-5472469 None:intergenic 40.0%
!!! AAAGGCATTTTGACGTTGTC+CGG - chr1_2:5472489-5472508 Msa0051360:intron 40.0%
ATGACAATGTGCAACTCGTT+TGG + chr1_2:5472964-5472983 None:intergenic 40.0%
ATAGCAAGGAGGATGGAAAT+AGG - chr1_2:5473343-5473362 Msa0051360:intron 40.0%
TGATGGGAATTGAGACTCTA+TGG - chr1_2:5473444-5473463 Msa0051360:intron 40.0%
TTAGTTGAGACAGTGGTTAG+TGG - chr1_2:5473551-5473570 Msa0051360:intron 40.0%
TAGTTGAGACAGTGGTTAGT+GGG - chr1_2:5473552-5473571 Msa0051360:intron 40.0%
!! AAGCTAGTAATGGGTGGATT+TGG - chr1_2:5473618-5473637 Msa0051360:intron 40.0%
TCAAAGCCCTTACCATAAAG+TGG + chr1_2:5473724-5473743 None:intergenic 40.0%
!! TAAGGGCTTTGAAAAAGGTG+TGG - chr1_2:5473732-5473751 Msa0051360:intron 40.0%
!! AAGGGCTTTGAAAAAGGTGT+GGG - chr1_2:5473733-5473752 Msa0051360:intron 40.0%
! ATTTGGAGTTACTTCAAGGG+AGG - chr1_2:5473788-5473807 Msa0051360:intron 40.0%
CTCACGTAATATTGAAGCTC+AGG - chr1_2:5473882-5473901 Msa0051360:intron 40.0%
CACGTAATATTGAAGCTCAG+GGG - chr1_2:5473884-5473903 Msa0051360:intron 40.0%
CAAAAATTATCGATCGAGCC+CGG + chr1_2:5473943-5473962 None:intergenic 40.0%
!!! TGTTAATGGGCTTTTGGGTT+GGG + chr1_2:5473975-5473994 None:intergenic 40.0%
TTCTCATACGCAAATAGGCT+CGG - chr1_2:5474031-5474050 Msa0051360:intron 40.0%
ACTACGCGTATATTATAGGG+TGG + chr1_2:5474233-5474252 None:intergenic 40.0%
! AAGAGATGCTTACTAGCTTC+TGG + chr1_2:5475113-5475132 None:intergenic 40.0%
! CTTATTTCGTCGACTATCGT+TGG - chr1_2:5475277-5475296 Msa0051360:intron 40.0%
CTCAAAGCTCAGAGAATGTT+TGG + chr1_2:5475637-5475656 None:intergenic 40.0%
!! TCTGAGCTTTGAGATATGTC+AGG - chr1_2:5475644-5475663 Msa0051360:intron 40.0%
!! CTGAGCTTTGAGATATGTCA+GGG - chr1_2:5475645-5475664 Msa0051360:intron 40.0%
ATATGTCAGGGTAAGATCTC+AGG - chr1_2:5475657-5475676 Msa0051360:intron 40.0%
! AATTAGAAGCTAGTGATGGG+TGG - chr1_2:5476601-5476620 Msa0051360:intron 40.0%
CTCGTGAACATTGTTCAACA+GGG + chr1_2:5476631-5476650 None:intergenic 40.0%
ACTCGTGAACATTGTTCAAC+AGG + chr1_2:5476632-5476651 None:intergenic 40.0%
TAAGGGATTTGGAAAAGGTG+TGG - chr1_2:5476721-5476740 Msa0051360:intron 40.0%
! AAGGGATTTGGAAAAGGTGT+GGG - chr1_2:5476722-5476741 Msa0051360:intron 40.0%
GGAGATTGATGTTTCGTCTT+AGG - chr1_2:5476743-5476762 Msa0051360:intron 40.0%
CTTAGGCCAAGGTTATGATT+TGG - chr1_2:5476760-5476779 Msa0051360:intron 40.0%
! ATTTGGAGTTACTTCAAGGG+AGG - chr1_2:5473788-5473807 Msa0051360:intron 40.0%
CTATTGTTGGGTTCTTTGGT+TGG - chr1_2:5477062-5477081 Msa0051360:intron 40.0%
!!! TTTTTTCAAGAAGGGGTTGC+AGG - chr1_2:5477100-5477119 Msa0051360:intron 40.0%
TCTCAAAGCACAGAGATTGT+TGG + chr1_2:5477413-5477432 None:intergenic 40.0%
!!! GGGTGCGACCATATATTTTT+TGG + chr1_2:5477511-5477530 None:intergenic 40.0%
TCTTATGTTGGATTTCTCCG+CGG + chr1_2:5478005-5478024 None:intergenic 40.0%
GGTATTATCGAGAGAAACTG+CGG + chr1_2:5478215-5478234 None:intergenic 40.0%
!! TGTTGGAAGCACCAAATCAT+TGG - chr1_2:5478321-5478340 Msa0051360:intron 40.0%
TGCTCAGAAAAAGGGTGAAA+TGG + chr1_2:5478381-5478400 None:intergenic 40.0%
ATGGGTGATGCTCAGAAAAA+GGG + chr1_2:5478389-5478408 None:intergenic 40.0%
AATGGGTGATGCTCAGAAAA+AGG + chr1_2:5478390-5478409 None:intergenic 40.0%
! ACTTTGTTTGCGAGTTTGGA+GGG - chr1_2:5478603-5478622 Msa0051360:intron 40.0%
! GGAAGGGAAAATAGGGTTTT+AGG - chr1_2:5478625-5478644 Msa0051360:intron 40.0%
!!! AGGGAAAATAGGGTTTTAGG+GGG - chr1_2:5478628-5478647 Msa0051360:intron 40.0%
! TTTGGAGTTCCTCCAATTTG+AGG - chr1_2:5478832-5478851 Msa0051360:CDS 40.0%
TTGGAGTTCCTCCAATTTGA+GGG - chr1_2:5478833-5478852 Msa0051360:CDS 40.0%
AATCTCACCAACAGAGTCTT+AGG - chr1_2:5478879-5478898 Msa0051360:CDS 40.0%
ATCTCACCAACAGAGTCTTA+GGG - chr1_2:5478880-5478899 Msa0051360:CDS 40.0%
AGAGTCTTAGGGTGTGTAAA+AGG - chr1_2:5478891-5478910 Msa0051360:CDS 40.0%
GTAAAAGGAGATTGCAGTGT+AGG - chr1_2:5478906-5478925 Msa0051360:CDS 40.0%
! GATTGCAGTGTAGGTTTTCT+TGG - chr1_2:5478915-5478934 Msa0051360:CDS 40.0%
CCTTTAAGTGTCACATTTGC+TGG + chr1_2:5479188-5479207 None:intergenic 40.0%
CCAGCAAATGTGACACTTAA+AGG - chr1_2:5479185-5479204 Msa0051360:CDS 40.0%
CTATTTACTTCACGAACGGT+TGG - chr1_2:5479255-5479274 Msa0051360:CDS 40.0%
AATCATTCTGCTTCAAGGAG+TGG + chr1_2:5479298-5479317 None:intergenic 40.0%
CAATGGTGAATCACAGTTTG+AGG - chr1_2:5479334-5479353 Msa0051360:intron 40.0%
! TCTTCCGCCCATAATTTTTC+AGG + chr1_2:5479467-5479486 None:intergenic 40.0%
TCATTCATGTGGAACATGGA+AGG + chr1_2:5479604-5479623 None:intergenic 40.0%
!! AGAGAGGAACCATGTTTTTG+TGG - chr1_2:5479998-5480017 Msa0051360:intron 40.0%
TAGATAGTGTTTGCCGAACA+AGG + chr1_2:5480093-5480112 None:intergenic 40.0%
AATCTGCAAACATCCCTCTT+AGG - chr1_2:5480190-5480209 Msa0051360:CDS 40.0%
!! CCTTTAAGGGTCACATTTTC+TGG + chr1_2:5480314-5480333 None:intergenic 40.0%
CCAGAAAATGTGACCCTTAA+AGG - chr1_2:5480311-5480330 Msa0051360:CDS 40.0%
AACTCCACTAGGACCTTTAA+GGG + chr1_2:5480327-5480346 None:intergenic 40.0%
TAACTCCACTAGGACCTTTA+AGG + chr1_2:5480328-5480347 None:intergenic 40.0%
ATAAGGCTGACAACTAGAGA+TGG - chr1_2:5480356-5480375 Msa0051360:intron 40.0%
CACCATTGTACTTACAGACA+AGG + chr1_2:5480448-5480467 None:intergenic 40.0%
GTCAATACTGCTTCTAATGC+TGG - chr1_2:5480608-5480627 Msa0051360:CDS 40.0%
GATCACCAAAAGCTGCTAAT+TGG - chr1_2:5480729-5480748 Msa0051360:CDS 40.0%
TCACCAAAAGCTGCTAATTG+GGG - chr1_2:5480731-5480750 Msa0051360:CDS 40.0%
ATAGGGAGAGAAACACACAT+GGG + chr1_2:5481154-5481173 None:intergenic 40.0%
TGGCAAGTTAGCTAGAGATA+GGG + chr1_2:5481171-5481190 None:intergenic 40.0%
TTGGCAAGTTAGCTAGAGAT+AGG + chr1_2:5481172-5481191 None:intergenic 40.0%
TGTGAAGGATGACATAACCA+TGG - chr1_2:5481277-5481296 Msa0051360:intron 40.0%
! GACATAACCATGGTGTTTTG+TGG - chr1_2:5481287-5481306 Msa0051360:intron 40.0%
! ATAACCATGGTGTTTTGTGG+TGG - chr1_2:5481290-5481309 Msa0051360:intron 40.0%
ATATCCACCACAAAACACCA+TGG + chr1_2:5481297-5481316 None:intergenic 40.0%
!!! ATGGTGTTTTGTGGTGGATA+TGG - chr1_2:5481296-5481315 Msa0051360:intron 40.0%
!! CATTTTGGCCTTTCCCTTAA+TGG - chr1_2:5481388-5481407 Msa0051360:intron 40.0%
TCTCTCAGTCAAGTAATCTC+TGG - chr1_2:5481422-5481441 Msa0051360:intron 40.0%
TGAACTGTTCAATTCCTCAG+AGG - chr1_2:5481706-5481725 Msa0051360:intron 40.0%
TCTACCTTCCCACTTCTATT+CGG + chr1_2:5481740-5481759 None:intergenic 40.0%
GACGACCATTGTATTTACAG+CGG - chr1_2:5481758-5481777 Msa0051360:intron 40.0%
AAGCTCCGCTGTAAATACAA+TGG + chr1_2:5481766-5481785 None:intergenic 40.0%
! AAAGTCAACAGCACTTGTTG+AGG - chr1_2:5481793-5481812 Msa0051360:intron 40.0%
TGCACAGAACTGAAGACAAT+TGG + chr1_2:5481937-5481956 None:intergenic 40.0%
TTCTTCCTATTCACTGTGCT+TGG - chr1_2:5482118-5482137 Msa0051360:five_prime_UTR 40.0%
TAATGCCAAGCACAGTGAAT+AGG + chr1_2:5482126-5482145 None:intergenic 40.0%
ATGCGCAGTCGAAAATTGAT+GGG + chr1_2:5482203-5482222 None:intergenic 40.0%
AAAATCGGTGTATCGCTGTT+TGG + chr1_2:5482229-5482248 None:intergenic 40.0%
CATACAAGTCACTCTCTATG+TGG - chr1_2:5482307-5482326 Msa0051360:intron 40.0%
TGTTCGTGGCAATAGCATAA+AGG - chr1_2:5470150-5470169 Msa0051360:CDS 40.0%
!! CTTTGGGTTGAGTAGTTACG+AGG + chr1_2:5466952-5466971 None:intergenic 45.0%
CTCGTAACTACTCAACCCAA+AGG - chr1_2:5466950-5466969 Msa0051360:CDS 45.0%
AGAGAGAGATGAGAGAGAGA+GGG + chr1_2:5467002-5467021 None:intergenic 45.0%
ACGAAATCACAGTGGTAGTC+TGG + chr1_2:5467620-5467639 None:intergenic 45.0%
!! GTTTGGATGAAGGGTTTTGG+AGG - chr1_2:5467738-5467757 Msa0051360:intron 45.0%
TTGGATGAAAGTTCTCGGAG+GGG + chr1_2:5467922-5467941 None:intergenic 45.0%
GTTTGGATGAAAGTTCTCGG+AGG + chr1_2:5467924-5467943 None:intergenic 45.0%
CATACCCTTAAGCAAGGTGA+AGG - chr1_2:5467943-5467962 Msa0051360:intron 45.0%
GTAAGCCTTCACCTTGCTTA+AGG + chr1_2:5467951-5467970 None:intergenic 45.0%
TATGCTGGGAGAGAAAGTGA+GGG + chr1_2:5467973-5467992 None:intergenic 45.0%
ATATGCTGGGAGAGAAAGTG+AGG + chr1_2:5467974-5467993 None:intergenic 45.0%
CTGGTCCTAGTGGAAATACT+TGG - chr1_2:5468316-5468335 Msa0051360:intron 45.0%
GCAAGTTCGTTTAGTTGAGC+AGG - chr1_2:5468338-5468357 Msa0051360:intron 45.0%
AGGACAGAAAAGTGATGCTG+AGG - chr1_2:5468557-5468576 Msa0051360:intron 45.0%
TTACCAGCAATAGCCAACTC+AGG + chr1_2:5468654-5468673 None:intergenic 45.0%
TACAGGATTGCTGCATCTGT+GGG + chr1_2:5468973-5468992 None:intergenic 45.0%
ATACAGGATTGCTGCATCTG+TGG + chr1_2:5468974-5468993 None:intergenic 45.0%
GCAGCAATCCTGTATAGAAG+TGG - chr1_2:5468979-5468998 Msa0051360:CDS 45.0%
CTTCCTTCCCACTTCTATAC+AGG + chr1_2:5468990-5469009 None:intergenic 45.0%
AAGCTCCGCTAAGAATATCG+TGG + chr1_2:5469017-5469036 None:intergenic 45.0%
CTCCCTTTATGTATGGAGGA+TGG - chr1_2:5469261-5469280 Msa0051360:intron 45.0%
! CCCAGGTTGACTCATTAACT+AGG + chr1_2:5469376-5469395 None:intergenic 45.0%
CCAACATGCATTGAAGTGCA+AGG + chr1_2:5469419-5469438 None:intergenic 45.0%
CCTTGCACTTCAATGCATGT+TGG - chr1_2:5469416-5469435 Msa0051360:intron 45.0%
! TACTTGGTGAAGATGCTGCT+TGG - chr1_2:5469452-5469471 Msa0051360:intron 45.0%
ACAAGTCACACTCTATGTGG+AGG - chr1_2:5470115-5470134 Msa0051360:CDS 45.0%
ATTACGTGTTCGCATTGCTG+AGG - chr1_2:5470213-5470232 Msa0051360:intron 45.0%
!! AAAAGATGGGTTAGACTGCC+AGG - chr1_2:5470240-5470259 Msa0051360:intron 45.0%
TAGCTCAAAGTGCAGAACGA+AGG - chr1_2:5470351-5470370 Msa0051360:intron 45.0%
CGAAGTAGTTGAAGCTCTAC+CGG + chr1_2:5470446-5470465 None:intergenic 45.0%
!!! ATGGGAAGCTTTTGACTTGG+GGG + chr1_2:5470485-5470504 None:intergenic 45.0%
TCCTCTATTTGCCCACTAGA+TGG - chr1_2:5470525-5470544 Msa0051360:intron 45.0%
AAACAAAGACAGCTGTACCG+AGG - chr1_2:5470825-5470844 Msa0051360:intron 45.0%
! TCTCAAACCAGCTTTAGCCT+GGG + chr1_2:5470879-5470898 None:intergenic 45.0%
! TTCTCAAACCAGCTTTAGCC+TGG + chr1_2:5470880-5470899 None:intergenic 45.0%
CAGTGGATCATACACTTTGG+TGG - chr1_2:5470988-5471007 Msa0051360:intron 45.0%
GTGCAGCAGAGAACTGATAT+GGG + chr1_2:5471108-5471127 None:intergenic 45.0%
TGTGCAGCAGAGAACTGATA+TGG + chr1_2:5471109-5471128 None:intergenic 45.0%
GTTACGCTTCGCAATTCAAG+AGG - chr1_2:5471151-5471170 Msa0051360:intron 45.0%
AACTCTGTTCCAGATGCCAA+AGG - chr1_2:5471190-5471209 Msa0051360:intron 45.0%
ATTGTTCTGCCTTTGGCATC+TGG + chr1_2:5471202-5471221 None:intergenic 45.0%
GGTGTGAATTGTTCTGCCTT+TGG + chr1_2:5471209-5471228 None:intergenic 45.0%
GATGCAGGTTCATATATCCG+GGG - chr1_2:5471315-5471334 Msa0051360:intron 45.0%
TCATATATCCGGGGTTGGAA+AGG - chr1_2:5471324-5471343 Msa0051360:intron 45.0%
TCAGTAGGCTCGTGAAATGT+TGG - chr1_2:5471643-5471662 Msa0051360:intron 45.0%
GTGAAATGTTGGACAGGTAG+AGG - chr1_2:5471654-5471673 Msa0051360:intron 45.0%
!!! GCCTTTTTTGGTCACATTGG+AGG - chr1_2:5471901-5471920 Msa0051360:intron 45.0%
CCCTCCAATGTGACCAAAAA+AGG + chr1_2:5471905-5471924 None:intergenic 45.0%
TCTCTTCACTCTTCCTGTGT+AGG + chr1_2:5472017-5472036 None:intergenic 45.0%
GGGCAAGATCTACCAAGAAA+AGG - chr1_2:5472420-5472439 Msa0051360:intron 45.0%
GGACAACGTCAAAATGCCTT+TGG + chr1_2:5472490-5472509 None:intergenic 45.0%
ATCTTCGGGTGCAATGCATA+TGG - chr1_2:5472872-5472891 Msa0051360:intron 45.0%
TCTTCGGGTGCAATGCATAT+GGG - chr1_2:5472873-5472892 Msa0051360:intron 45.0%
AAGCAGCAGTCAAAAACAGC+TGG - chr1_2:5472915-5472934 Msa0051360:intron 45.0%
AGCAGCAGTCAAAAACAGCT+GGG - chr1_2:5472916-5472935 Msa0051360:intron 45.0%
! CAAATAGAGCACTCCGTTTG+AGG + chr1_2:5473073-5473092 None:intergenic 45.0%
! CAAACGGAGTGCTCTATTTG+TGG - chr1_2:5473073-5473092 Msa0051360:intron 45.0%
AAGCTACTGCTTGTGGTGTT+AGG - chr1_2:5473585-5473604 Msa0051360:intron 45.0%
GGAGATTGATGTTCCGTCTA+AGG - chr1_2:5473754-5473773 Msa0051360:intron 45.0%
! TGATGTTCCGTCTAAGGCTA+AGG - chr1_2:5473760-5473779 Msa0051360:intron 45.0%
GTAATATTGAAGCTCAGGGG+CGG - chr1_2:5473887-5473906 Msa0051360:intron 45.0%
!!! GTGTTAATGGGCTTTTGGGT+TGG + chr1_2:5473976-5473995 None:intergenic 45.0%
! AGATGCTTACTAGCTTCTGG+CGG + chr1_2:5475110-5475129 None:intergenic 45.0%
CTATCGTTGGGTTCTTTCGT+TGG - chr1_2:5475290-5475309 Msa0051360:intron 45.0%
! TTTTGTCAAGAAGGGGTTGC+AGG - chr1_2:5475329-5475348 Msa0051360:intron 45.0%
!! TGATGATTTGTTGGTCGAGC+TGG - chr1_2:5475392-5475411 Msa0051360:intron 45.0%
!! ATGGATATTTTAGGAGGCGC+GGG + chr1_2:5475850-5475869 None:intergenic 45.0%
!! CATGGATATTTTAGGAGGCG+CGG + chr1_2:5475851-5475870 None:intergenic 45.0%
GAACGTAAACTCGTTCATGC+AGG + chr1_2:5476224-5476243 None:intergenic 45.0%
TGATGTTTCGTCTTAGGCCA+AGG - chr1_2:5476749-5476768 Msa0051360:intron 45.0%
!! TGATGATTTGTTGGTCGAGC+TGG - chr1_2:5475392-5475411 Msa0051360:intron 45.0%
GAACGTAAACTCGTTCATGC+AGG + chr1_2:5476224-5476243 None:intergenic 45.0%
CACAAGAAACGGCAGTCAAA+CGG + chr1_2:5478163-5478182 None:intergenic 45.0%
GAGAAACTGCGGAAGAGAAA+TGG + chr1_2:5478204-5478223 None:intergenic 45.0%
GAAGGAACACGAAACTGTGT+TGG - chr1_2:5478304-5478323 Msa0051360:intron 45.0%
!! TGGAAGCACCAAATCATTGG+AGG - chr1_2:5478324-5478343 Msa0051360:CDS 45.0%
! GACTTTGTTTGCGAGTTTGG+AGG - chr1_2:5478602-5478621 Msa0051360:intron 45.0%
! CTTTGTTTGCGAGTTTGGAG+GGG - chr1_2:5478604-5478623 Msa0051360:intron 45.0%
TTTGGAGGGGAAGGGAAAAT+AGG - chr1_2:5478617-5478636 Msa0051360:intron 45.0%
TTGGAGGGGAAGGGAAAATA+GGG - chr1_2:5478618-5478637 Msa0051360:intron 45.0%
!! TTTTAGGGGGAAGAGAGTAG+AGG - chr1_2:5478641-5478660 Msa0051360:intron 45.0%
TTTAGGGGGAAGAGAGTAGA+GGG - chr1_2:5478642-5478661 Msa0051360:intron 45.0%
TACACACCCTAAGACTCTGT+TGG + chr1_2:5478889-5478908 None:intergenic 45.0%
AAGGTCCTAGCGAAATTGTG+TGG - chr1_2:5479204-5479223 Msa0051360:CDS 45.0%
TATTCAACACCACCACTGGA+AGG + chr1_2:5479437-5479456 None:intergenic 45.0%
ACTGTATTCAACACCACCAC+TGG + chr1_2:5479441-5479460 None:intergenic 45.0%
TATGGGCGGAAGACATTTAC+TGG - chr1_2:5479474-5479493 Msa0051360:intron 45.0%
AAGCTCAAGAGAGCCTAAGA+GGG + chr1_2:5480206-5480225 None:intergenic 45.0%
TAAGCTCAAGAGAGCCTAAG+AGG + chr1_2:5480207-5480226 None:intergenic 45.0%
AAGGTCCTAGTGGAGTTACA+TGG - chr1_2:5480330-5480349 Msa0051360:CDS 45.0%
AGATGGCACTGTTTACTTCG+TGG - chr1_2:5480373-5480392 Msa0051360:intron 45.0%
CAATGGTGAATCGCACTTTG+AGG - chr1_2:5480460-5480479 Msa0051360:intron 45.0%
ACTGAATAGCTGCGGTCTTA+GGG + chr1_2:5480667-5480686 None:intergenic 45.0%
!! TCTCCTCTTGGTTCTTTTGC+CGG + chr1_2:5480705-5480724 None:intergenic 45.0%
TGGTGATCTTCTTCTCCTCT+TGG + chr1_2:5480717-5480736 None:intergenic 45.0%
ACTTGTAACAAGCAACACCC+AGG - chr1_2:5480776-5480795 Msa0051360:CDS 45.0%
GATAGGGAGAGAAACACACA+TGG + chr1_2:5481155-5481174 None:intergenic 45.0%
GTGTTGTCAAATATCGGCCA+TGG - chr1_2:5481211-5481230 Msa0051360:intron 45.0%
TTGTCAAATATCGGCCATGG+CGG - chr1_2:5481214-5481233 Msa0051360:intron 45.0%
CCTTCACAAATAGGTCATGC+CGG + chr1_2:5481265-5481284 None:intergenic 45.0%
!!! GTGTTTTGTGGTGGATATGG+CGG - chr1_2:5481299-5481318 Msa0051360:intron 45.0%
GGAAAGCCAAAAATCCCCAT+AGG + chr1_2:5481327-5481346 None:intergenic 45.0%
!!! GGATTTTTGGCTTTCCGTCA+CGG - chr1_2:5481331-5481350 Msa0051360:intron 45.0%
!! GTAGTATTATCGATGGCGGA+TGG + chr1_2:5481361-5481380 None:intergenic 45.0%
TCAAATGCAGTGGTGTGCTT+GGG + chr1_2:5481546-5481565 None:intergenic 45.0%
ATCAAATGCAGTGGTGTGCT+TGG + chr1_2:5481547-5481566 None:intergenic 45.0%
CTACCTTCCCACTTCTATTC+GGG + chr1_2:5481739-5481758 None:intergenic 45.0%
ACGAGAACCACTGACATTGA+AGG + chr1_2:5481876-5481895 None:intergenic 45.0%
TGCGCAGTCGAAAATTGATG+GGG + chr1_2:5482202-5482221 None:intergenic 45.0%
GATGCGCAGTCGAAAATTGA+TGG + chr1_2:5482204-5482223 None:intergenic 45.0%
ACAAGTCACTCTCTATGTGG+AGG - chr1_2:5482310-5482329 Msa0051360:intron 45.0%
!! GGATGGATGGATTTTGTTCG+TGG - chr1_2:5482331-5482350 Msa0051360:intron 45.0%
CGTGGCAATAGCATAAAGGT+TGG - chr1_2:5482349-5482368 Msa0051360:intron 45.0%
ATCGCTGAGGTTGGAAAAGA+TGG - chr1_2:5482424-5482443 Msa0051360:five_prime_UTR 45.0%
TCGCTGAGGTTGGAAAAGAT+GGG - chr1_2:5482425-5482444 Msa0051360:five_prime_UTR 45.0%
!!! AAAATAAAATAATCTTTTTA+AGG - chr1_2:5472789-5472808 Msa0051360:intron 5.0%
!!! ATTAAATTTTAATTAGATTT+GGG + chr1_2:5475755-5475774 None:intergenic 5.0%
!!! TATTAAATTTTAATTAGATT+TGG + chr1_2:5475756-5475775 None:intergenic 5.0%
!!! ATTATTTTTTATTTTTTTTG+AGG - chr1_2:5478531-5478550 Msa0051360:intron 5.0%
!!! AGTTTTTTTTTTTTTTTTTA+AGG - chr1_2:5478739-5478758 Msa0051360:intron 5.0%
!!! TTAATTATTTTAACAAAATA+TGG + chr1_2:5481851-5481870 None:intergenic 5.0%
AGAGATGAGAGAGAGAGGGA+GGG + chr1_2:5466998-5467017 None:intergenic 50.0%
GAGAGAGAGATGAGAGAGAG+AGG + chr1_2:5467003-5467022 None:intergenic 50.0%
TGCACCGTGCATGTTTGGAT+TGG + chr1_2:5467654-5467673 None:intergenic 50.0%
ACAGATGCACCGTGCATGTT+TGG + chr1_2:5467659-5467678 None:intergenic 50.0%
ATGTCGTGCCCTCCATTTGA+TGG + chr1_2:5468278-5468297 None:intergenic 50.0%
GTCACACTCTATGTGGAGGA+TGG - chr1_2:5470119-5470138 Msa0051360:CDS 50.0%
CACTCTATGTGGAGGATGGA+TGG - chr1_2:5470123-5470142 Msa0051360:CDS 50.0%
! GGATGGATGGCTTTTGTTCG+TGG - chr1_2:5470136-5470155 Msa0051360:CDS 50.0%
! GCCATCTAGTGGGCAAATAG+AGG + chr1_2:5470529-5470548 None:intergenic 50.0%
CTAAGTTCCCAGGCTAAAGC+TGG - chr1_2:5470869-5470888 Msa0051360:intron 50.0%
GCAATTCAAGAGGCCAGTGT+TGG - chr1_2:5471161-5471180 Msa0051360:intron 50.0%
! TTCACACCTTTTGTGGGGGA+TGG - chr1_2:5471221-5471240 Msa0051360:intron 50.0%
CAGGTTCATATATCCGGGGT+TGG - chr1_2:5471319-5471338 Msa0051360:intron 50.0%
ATATCCGGGGTTGGAAAGGA+AGG - chr1_2:5471328-5471347 Msa0051360:intron 50.0%
AAGACCTTCCTTTCCAACCC+CGG + chr1_2:5471335-5471354 None:intergenic 50.0%
AGGCTCGTGAAATGTTGGAC+AGG - chr1_2:5471648-5471667 Msa0051360:intron 50.0%
CACTCTTCCTGTGTAGGAGT+AGG + chr1_2:5472011-5472030 None:intergenic 50.0%
GCAGCAGTCAAAAACAGCTG+GGG - chr1_2:5472917-5472936 Msa0051360:intron 50.0%
AAGAAAAGGAGCGGGGTCAA+GGG + chr1_2:5473296-5473315 None:intergenic 50.0%
AAAGAAAAGGAGCGGGGTCA+AGG + chr1_2:5473297-5473316 None:intergenic 50.0%
AGATCGGAGGGATGATAGCA+AGG - chr1_2:5473329-5473348 Msa0051360:intron 50.0%
AGGGATGATAGCAAGGAGGA+TGG - chr1_2:5473336-5473355 Msa0051360:intron 50.0%
! AGTGGTTAGTGGGTGTGGAA+TGG - chr1_2:5473562-5473581 Msa0051360:intron 50.0%
GGAATGGAAGCTACTGCTTG+TGG - chr1_2:5473578-5473597 Msa0051360:intron 50.0%
GGGAGGCTAGCAACTAAAGA+TGG - chr1_2:5473805-5473824 Msa0051360:intron 50.0%
CCAGGAAATTTATGGAGGCC+GGG + chr1_2:5475085-5475104 None:intergenic 50.0%
GCCAGGAAATTTATGGAGGC+CGG + chr1_2:5475086-5475105 None:intergenic 50.0%
CGGAGCCAGGAAATTTATGG+AGG + chr1_2:5475090-5475109 None:intergenic 50.0%
TGGCGGAGCCAGGAAATTTA+TGG + chr1_2:5475093-5475112 None:intergenic 50.0%
CTGCGGAAGAGAAATGGTAC+AGG + chr1_2:5478198-5478217 None:intergenic 50.0%
TTTGCGAGTTTGGAGGGGAA+GGG - chr1_2:5478609-5478628 Msa0051360:intron 50.0%
CAAGCTCATAGTCCTTCCAG+TGG - chr1_2:5479422-5479441 Msa0051360:intron 50.0%
GTGACCCTTAAAGGTCCTAG+TGG - chr1_2:5480320-5480339 Msa0051360:CDS 50.0%
GGCACTGTTTACTTCGTGGA+CGG - chr1_2:5480377-5480396 Msa0051360:intron 50.0%
CTGTTTACTTCGTGGACGGT+TGG - chr1_2:5480381-5480400 Msa0051360:intron 50.0%
GCCATGCTCAAACAGCACAA+GGG - chr1_2:5480546-5480565 Msa0051360:CDS 50.0%
CCATGCTCAAACAGCACAAG+GGG - chr1_2:5480547-5480566 Msa0051360:CDS 50.0%
CATGCTCAAACAGCACAAGG+GGG - chr1_2:5480548-5480567 Msa0051360:CDS 50.0%
TGATTCCCCTGAGCAGTTCA+CGG - chr1_2:5480631-5480650 Msa0051360:CDS 50.0%
ATCATCCGTGAACTGCTCAG+GGG + chr1_2:5480639-5480658 None:intergenic 50.0%
CATCATCCGTGAACTGCTCA+GGG + chr1_2:5480640-5480659 None:intergenic 50.0%
CACTGAATAGCTGCGGTCTT+AGG + chr1_2:5480668-5480687 None:intergenic 50.0%
GAAGGGACACTGAATAGCTG+CGG + chr1_2:5480675-5480694 None:intergenic 50.0%
!!! CTTTTGCCGGTTGGTAGGAA+GGG + chr1_2:5480692-5480711 None:intergenic 50.0%
!!! TCTTTTGCCGGTTGGTAGGA+AGG + chr1_2:5480693-5480712 None:intergenic 50.0%
!! TGGTTCTTTTGCCGGTTGGT+AGG + chr1_2:5480697-5480716 None:intergenic 50.0%
!! CTCTTGGTTCTTTTGCCGGT+TGG + chr1_2:5480701-5480720 None:intergenic 50.0%
CAACCGGCAAAAGAACCAAG+AGG - chr1_2:5480699-5480718 Msa0051360:CDS 50.0%
! GCACCCCAATTAGCAGCTTT+TGG + chr1_2:5480737-5480756 None:intergenic 50.0%
GAGAAACACACATGGGAGAG+AGG + chr1_2:5481147-5481166 None:intergenic 50.0%
CCGGCATGACCTATTTGTGA+AGG - chr1_2:5481262-5481281 Msa0051360:intron 50.0%
GTCACTCTCTATGTGGAGGA+TGG - chr1_2:5482314-5482333 Msa0051360:intron 50.0%
CTCTCTATGTGGAGGATGGA+TGG - chr1_2:5482318-5482337 Msa0051360:intron 50.0%
ACACGGAGCGACAGTGTTGT+TGG + chr1_2:5466925-5466944 None:intergenic 55.0%
GAGGGAGAGGGAGAACCTTT+GGG + chr1_2:5466968-5466987 None:intergenic 55.0%
ATGAGAGAGAGAGGGAGGGA+GGG + chr1_2:5466994-5467013 None:intergenic 55.0%
GAGAGATGAGAGAGAGAGGG+AGG + chr1_2:5466999-5467018 None:intergenic 55.0%
! TTTGACCAGGTGTTGCGCGA+AGG - chr1_2:5467098-5467117 Msa0051360:CDS 55.0%
TGAAAGTTCTCGGAGGGGAG+AGG + chr1_2:5467917-5467936 None:intergenic 55.0%
! CAAATGGAGGGCACGACATG+CGG - chr1_2:5468279-5468298 Msa0051360:intron 55.0%
! CTCAGGCTCCTGGTTCTCAA+TGG + chr1_2:5468637-5468656 None:intergenic 55.0%
TGAGAACCAGGAGCCTGAGT+TGG - chr1_2:5468638-5468657 Msa0051360:CDS 55.0%
CAATAGCCAACTCAGGCTCC+TGG + chr1_2:5468647-5468666 None:intergenic 55.0%
! GAGCCTGAGTTGGCTATTGC+TGG - chr1_2:5468648-5468667 Msa0051360:CDS 55.0%
CGTGTTCGCATTGCTGAGGT+TGG - chr1_2:5470217-5470236 Msa0051360:intron 55.0%
!! GATGGGTTAGACTGCCAGGT+TGG - chr1_2:5470244-5470263 Msa0051360:intron 55.0%
GGCTATCCATCCCCCACAAA+AGG + chr1_2:5471230-5471249 None:intergenic 55.0%
TCGGAGGGATGATAGCAAGG+AGG - chr1_2:5473332-5473351 Msa0051360:intron 55.0%
! GAGACAGTGGTTAGTGGGTG+TGG - chr1_2:5473557-5473576 Msa0051360:intron 55.0%
CCCGGCCTCCATAAATTTCC+TGG - chr1_2:5475082-5475101 Msa0051360:intron 55.0%
GTTTGCGAGTTTGGAGGGGA+AGG - chr1_2:5478608-5478627 Msa0051360:intron 55.0%
GCTCATAGTCCTTCCAGTGG+TGG - chr1_2:5479425-5479444 Msa0051360:intron 55.0%
GGCCATGCTCAAACAGCACA+AGG - chr1_2:5480545-5480564 Msa0051360:CDS 55.0%
!! CCCCTTGTGCTGTTTGAGCA+TGG + chr1_2:5480550-5480569 None:intergenic 55.0%
GCATCATCCGTGAACTGCTC+AGG + chr1_2:5480641-5480660 None:intergenic 55.0%
CAGTGTCCCTTCCTACCAAC+CGG - chr1_2:5480683-5480702 Msa0051360:CDS 55.0%
!! ATATCGGCCATGGCGGATTG+TGG - chr1_2:5481221-5481240 Msa0051360:intron 55.0%
CAGCCAGCCCGAATAGAAGT+GGG - chr1_2:5481729-5481748 Msa0051360:intron 55.0%
CTTCCCACTTCTATTCGGGC+TGG + chr1_2:5481735-5481754 None:intergenic 55.0%
CAGCCCGAATAGAAGTGGGA+AGG - chr1_2:5481733-5481752 Msa0051360:intron 55.0%
TCGTGTTCGCATCATCGCTG+AGG - chr1_2:5482411-5482430 Msa0051360:five_prime_UTR 55.0%
GTTCGCATCATCGCTGAGGT+TGG - chr1_2:5482415-5482434 Msa0051360:five_prime_UTR 55.0%
GGAGGGAGAGGGAGAACCTT+TGG + chr1_2:5466969-5466988 None:intergenic 60.0%
GATGAGAGAGAGAGGGAGGG+AGG + chr1_2:5466995-5467014 None:intergenic 60.0%
GTGCGACGCCATTGAGAACC+AGG - chr1_2:5468626-5468645 Msa0051360:CDS 60.0%
GTGGCGTCCTACTCCTACAC+AGG - chr1_2:5472001-5472020 Msa0051360:intron 60.0%
! TACTAGCTTCTGGCGGAGCC+AGG + chr1_2:5475103-5475122 None:intergenic 60.0%
! GGGTGCGAGAGCACATGCTT+GGG - chr1_2:5480751-5480770 Msa0051360:CDS 60.0%
TCCACCACCACAATCCGCCA+TGG + chr1_2:5481231-5481250 None:intergenic 60.0%
GTGGATATGGCGGCGCCTAT+GGG - chr1_2:5481309-5481328 Msa0051360:intron 60.0%
TGGATATGGCGGCGCCTATG+GGG - chr1_2:5481310-5481329 Msa0051360:intron 60.0%
! GCGGCGCCTATGGGGATTTT+TGG - chr1_2:5481318-5481337 Msa0051360:intron 60.0%
GCAGCCAGCCCGAATAGAAG+TGG - chr1_2:5481728-5481747 Msa0051360:intron 60.0%
GAGAGAGAGGGAGGGAGGGA+GGG + chr1_2:5466990-5467009 None:intergenic 65.0%
AGAGAGAGAGGGAGGGAGGG+AGG + chr1_2:5466991-5467010 None:intergenic 65.0%
CTTCGCCTTCGCGCAACACC+TGG + chr1_2:5467106-5467125 None:intergenic 65.0%
! CAGGTGTTGCGCGAAGGCGA+AGG - chr1_2:5467104-5467123 Msa0051360:CDS 65.0%
GTTCTCGGAGGGGAGAGGAG+TGG + chr1_2:5467912-5467931 None:intergenic 65.0%
TCAGGGGCGGTTTCACCTCC+CGG - chr1_2:5473900-5473919 Msa0051360:intron 65.0%
! GGGGTGCGAGAGCACATGCT+TGG - chr1_2:5480750-5480769 Msa0051360:CDS 65.0%
!! TCGGCCATGGCGGATTGTGG+TGG - chr1_2:5481224-5481243 Msa0051360:intron 65.0%
!! GCCATGGCGGATTGTGGTGG+TGG - chr1_2:5481227-5481246 Msa0051360:intron 65.0%
GGTGGATATGGCGGCGCCTA+TGG - chr1_2:5481308-5481327 Msa0051360:intron 65.0%
! TGGCGGATGGCAGACCGTGA+CGG + chr1_2:5481348-5481367 None:intergenic 65.0%
!! ATTCGGGCTGGCTGCCTCTG+AGG + chr1_2:5481723-5481742 None:intergenic 65.0%
GAGGGAGGGAGGGAGGGAGA+GGG + chr1_2:5466980-5466999 None:intergenic 70.0%
GAGAGGGAGGGAGGGAGGGA+GGG + chr1_2:5466986-5467005 None:intergenic 70.0%
AGAGAGGGAGGGAGGGAGGG+AGG + chr1_2:5466987-5467006 None:intergenic 70.0%
CTCGGAGGGGAGAGGAGTGG+AGG + chr1_2:5467909-5467928 None:intergenic 70.0%
GTTTCACCTCCCGGCGACCC+CGG - chr1_2:5473909-5473928 Msa0051360:intron 70.0%
TTTCACCTCCCGGCGACCCC+GGG - chr1_2:5473910-5473929 Msa0051360:intron 70.0%
GGAGGGAGGGAGGGAGGGAG+AGG + chr1_2:5466981-5467000 None:intergenic 75.0%
ATCGAGCCCGGACGACCGCC+CGG + chr1_2:5473931-5473950 None:intergenic 75.0%
! TCGAGCCCGGACGACCGCCC+GGG + chr1_2:5473930-5473949 None:intergenic 80.0%
! CACCTCCCGGCGACCCCGGG+CGG - chr1_2:5473913-5473932 Msa0051360:intron 85.0%
! GACGACCGCCCGGGGTCGCC+GGG + chr1_2:5473921-5473940 None:intergenic 85.0%
! GGACGACCGCCCGGGGTCGC+CGG + chr1_2:5473922-5473941 None:intergenic 85.0%
! GGCGACCCCGGGCGGTCGTC+CGG - chr1_2:5473921-5473940 Msa0051360:intron 85.0%
! GCGACCCCGGGCGGTCGTCC+GGG - chr1_2:5473922-5473941 Msa0051360:intron 85.0%
! CGAGCCCGGACGACCGCCCG+GGG + chr1_2:5473929-5473948 None:intergenic 85.0%
! GACCGCCCGGGGTCGCCGGG+AGG + chr1_2:5473918-5473937 None:intergenic 90.0%
Chromosome Type Strat End Strand Name
chr1_2 gene 5466863 5482465 5466863 ID=Msa0051360;Name=Msa0051360
chr1_2 mRNA 5466863 5482465 5466863 ID=Msa0051360-mRNA-1;Parent=Msa0051360;Name=Msa0051360-mRNA-1;_AED=0.40;_eAED=0.40;_QI=250|0.54|0.5|1|0.90|0.83|12|0|1043
chr1_2 exon 5466863 5467135 5466863 ID=Msa0051360-mRNA-1:exon:1622;Parent=Msa0051360-mRNA-1
chr1_2 exon 5467427 5467602 5467427 ID=Msa0051360-mRNA-1:exon:1621;Parent=Msa0051360-mRNA-1
chr1_2 exon 5468576 5469059 5468576 ID=Msa0051360-mRNA-1:exon:1620;Parent=Msa0051360-mRNA-1
chr1_2 exon 5469772 5470185 5469772 ID=Msa0051360-mRNA-1:exon:1619;Parent=Msa0051360-mRNA-1
chr1_2 exon 5477822 5477887 5477822 ID=Msa0051360-mRNA-1:exon:1618;Parent=Msa0051360-mRNA-1
chr1_2 exon 5478007 5478228 5478007 ID=Msa0051360-mRNA-1:exon:1617;Parent=Msa0051360-mRNA-1
chr1_2 exon 5478322 5478491 5478322 ID=Msa0051360-mRNA-1:exon:1616;Parent=Msa0051360-mRNA-1
chr1_2 exon 5478814 5479330 5478814 ID=Msa0051360-mRNA-1:exon:1615;Parent=Msa0051360-mRNA-1
chr1_2 exon 5480176 5480351 5480176 ID=Msa0051360-mRNA-1:exon:1614;Parent=Msa0051360-mRNA-1
chr1_2 exon 5480527 5481073 5480527 ID=Msa0051360-mRNA-1:exon:1613;Parent=Msa0051360-mRNA-1
chr1_2 exon 5481994 5482221 5481994 ID=Msa0051360-mRNA-1:exon:1612;Parent=Msa0051360-mRNA-1
chr1_2 exon 5482357 5482465 5482357 ID=Msa0051360-mRNA-1:exon:1611;Parent=Msa0051360-mRNA-1
chr1_2 five_prime_UTR 5482357 5482465 5482357 ID=Msa0051360-mRNA-1:five_prime_utr;Parent=Msa0051360-mRNA-1
chr1_2 five_prime_UTR 5482081 5482221 5482081 ID=Msa0051360-mRNA-1:five_prime_utr;Parent=Msa0051360-mRNA-1
chr1_2 CDS 5481994 5482080 5481994 ID=Msa0051360-mRNA-1:cds;Parent=Msa0051360-mRNA-1
chr1_2 CDS 5480527 5481073 5480527 ID=Msa0051360-mRNA-1:cds;Parent=Msa0051360-mRNA-1
chr1_2 CDS 5480176 5480351 5480176 ID=Msa0051360-mRNA-1:cds;Parent=Msa0051360-mRNA-1
chr1_2 CDS 5478814 5479330 5478814 ID=Msa0051360-mRNA-1:cds;Parent=Msa0051360-mRNA-1
chr1_2 CDS 5478322 5478491 5478322 ID=Msa0051360-mRNA-1:cds;Parent=Msa0051360-mRNA-1
chr1_2 CDS 5478007 5478228 5478007 ID=Msa0051360-mRNA-1:cds;Parent=Msa0051360-mRNA-1
chr1_2 CDS 5477822 5477887 5477822 ID=Msa0051360-mRNA-1:cds;Parent=Msa0051360-mRNA-1
chr1_2 CDS 5469772 5470185 5469772 ID=Msa0051360-mRNA-1:cds;Parent=Msa0051360-mRNA-1
chr1_2 CDS 5468576 5469059 5468576 ID=Msa0051360-mRNA-1:cds;Parent=Msa0051360-mRNA-1
chr1_2 CDS 5467427 5467602 5467427 ID=Msa0051360-mRNA-1:cds;Parent=Msa0051360-mRNA-1
chr1_2 CDS 5466863 5467135 5466863 ID=Msa0051360-mRNA-1:cds;Parent=Msa0051360-mRNA-1
Gene Sequence

>Msa0051360

ATGGGTTGTGAGTGTAAGGGAAAGTTAAATGTGAGAAAACCTCACTTCTATCACCTCTTTAACCCTTCTTCAACCTCTCAATCTCTGAGAGTTCCAGATGGTTTTGTCCATCAAATGGAGGGCACGACATGCGGATTAGTTTCATTAACTGGTCCTAGTGGAAATACTTGGCAAGTTCGTTTAGTTGAGCAGGACAATCATCTGTTCTTTCATCATGGATGGTCAACATTTGTGGGAGATCATCATTTACAATATGGCGACCTTTTGGTTTTCAGATACGAGGGTCACTTGCATTTCACTGCGCAAGTATTTGGTGAAAATGCTTGCGAGAAAGAAGCTGCATTTCATTCTGAGTGCAATCTAAATTCATTCAACTTCGATGATATTGAAGGACAGAAAAGTGATGCTGAGGTGATTTCATCTTTGAATGTTGTTGGTGATGTTCAGAAGAAAATGAGGTGCGACGCCATTGAGAACCAGGAGCCTGAGTTGGCTATTGCTGGTAAAAACCTATCCAATTATGAGTTGGTTAGACCAATTAGTATGATCAGAGAAACAGAAGAAACCTGCAAAGAATGTTCAGCTAGTACTGTCCATGTTCCTTTTCAAACAGGAAATAGTAATGAAGTTGAAGATGCAGCAATCCTGTATAGAAGTGGGAAGGAAGATGACCACGATATTCTTAGCGGAGCTTCACTATCAAAGTTATCAGCACATGATGAGAAAAAGATAGCCCAATCATTTACGTCCTCTTTTCCATATTTTGTTAAAATAATCAAAACCTTCAATGTCAGTGGTTCATATACTCTGAATGTTCCATATCAATTTTCGATGTCACATTTTCCAAACTGCAAGACAAAGATTATTCTTTATAATTTGAAGGGAGAACACTGGACTGTTAATTCTGTTCCAACAACTAGAGTGCATACAAGTCACACTCTATGTGGAGGATGGATGGCTTTTGTTCGTGGCAATAGCATAAAAGTTGGAGATGTCTGCATTTTCGAACTTATACGTGAGTGTGAATTACGTGTTCGCATTGCTGAGGTTGGAAAAGATGGGTTAGACTGCCAGGTTGGAAAACTAGCTTGTAGCATGCTTAGTGAACGACATGATGTTGCTAGCCATAATACTTCCAGATATATGCCAAAGAAACCTAAAGTTAGCTCAAAGTGCAGAACGAAGGTTGATCTATTAGATAAAAAGTTGTCAAAGATTGGTCAAGAACCTGTTTTAGCCATTGAATTCAAGAAATCCGGTAGAGCTTCAACTACTTCGAAGAAGATGGGGCTTTCCCCCAAGTCAAAAGCTTCCCATAAAAAGACGGCTGTACCGAGGAAACATCGTGTTGAAGATGAACTAAGTTCCCAGGCTAAAGCTGGTTTGAGAATGTTGTTTGCACTCGACGAACAAAGAGTAGCTGAAGCTTTTACTTCCCCATTTCCTAATTTTGTGAAAATCATGAAGAAGTTCAATGTCAGTGGATCATACACTTTGAAAATCCCATATCAGTTCTCTGCTGCACATCTCCCCGCCTACAAAACAGAAGTTACGCTTCGCAATTCAAGAGGCCAGTGTTGGATTGTAAACTCTGTTCCAGATGCCAAAGGCAGAACAATTCACACCTTTTGTGGGGGATGGATAGCCTTTGTTCGTGATAATGACATCAATTTTGGTGATACTTGCATTTTCGAGCTCGTTTCTCATTATGTGATGCAGATCAATCAATCTCAAATGGAGATTTTTTGTGGTAAGAGTCGCAAAAGACTTGAGCATTTTATGCATGCACTTCCGAAAACATTTTCAGACAATTTAAAGAAGAAGTTGCCAGCAAATGTGACACTTAAAGGTCCTAGCGAAATTGTGTGGAATATAGGGCTTACAACTAGAGGTGATACTATTTACTTCACGAACGGTTGGCAAAAATTCGTGAAAGACCACTCCTTGAAGCAGAATGATTTCCTTGTATTTAAGTACAATGGTGAATCACAGTTTGAGGTTTTAATCTTTAATGGAAATACTTTCTGTGAGAAGGCAGCGTCATATTTTGTTCAAAAATGTGGACAAGCTCATAGTCCTTCCAGTGGTGGTGTTGAATACAGTTCACCTGAAAAATTATGGGCGGAAGACATTTACTGGAGCTATTTCAAATTCACACATTTCACCCTATTGCTTCACACCAATTTTGAACGACAACTTGCACTTCCTAAAACATTTTCAGACAATTTAAATAAGAAGTTGCCAGAAAATGTGACCCTTAAAGGTCCTAGTGGAGTTACATGGAATATAAGGCTGACAACTAGAGATGGCACTGTTTACTTCGTGGACGGTTGGCAACAATTCATGAACGATCACTCGTTGAAAGCTAATGATTTCCTTGTCTGTAAGTACAATGGTGAATCGCACTTTGAGGTTTTAATCTTTGATGGAGAAAGCTTCTGCGAGAAAGAAGCTTCTTATTTTGTCGAAAAATGCGGCCATGCTCAAACAGCACAAGGGGGTAGCAATGCATCGCAAACAAACAATTCTGTTGAAGAAGTCAATACTGCTTCTAATGCTGGTGATTCCCCTGAGCAGTTCACGGATGATGCAGTCCCTAAGACCGCAGCTATTCAGTGTCCCTTCCTACCAACCGGCAAAAGAACCAAGAGGAGAAGAAGATCACCAAAAGCTGCTAATTGGGAGGCAGCCAGCCCGAATAGAAGTGGGAAGGTAGACGACCATTGTATTTACAGCGGAGCTTCACTGTCAAAGTCAACAGCACTTGTTGAGGAAAAGATAGCCCAATCATTTTCCTCCTCATTTCCATATTTTGTTAAAATAATTAAAGCCTTCAATGTCAGTGGTTCTCGTACTATTAATATACCCCATCAATTTTCGACTGCGCATCTTCCAAACAGCGATACACCGATTTTTCTTCAAAATTTGAAGGGAGAACACTGGCTTGTTAATTCTGTTACTAAAACTAAAATACATACAAGTCACTCTCTATGTGGAGGATGGATGGATTTTGTTCGTGGCAATAGCATAAAGGTTGGAGATGTCTGCATTTTCGAACTTGTACAAGAGTGTGAATTTCGTGTTCGCATCATCGCTGAGGTTGGAAAAGATGGGCTAGTACTCCCTCGTTGA
Protein sequence

>Msa0051360

MGCECKGKLNVRKPHFYHLFNPSSTSQSLRVPDGFVHQMEGTTCGLVSLTGPSGNTWQVRLVEQDNHLFFHHGWSTFVGDHHLQYGDLLVFRYEGHLHFTAQVFGENACEKEAAFHSECNLNSFNFDDIEGQKSDAEVISSLNVVGDVQKKMRCDAIENQEPELAIAGKNLSNYELVRPISMIRETEETCKECSASTVHVPFQTGNSNEVEDAAILYRSGKEDDHDILSGASLSKLSAHDEKKIAQSFTSSFPYFVKIIKTFNVSGSYTLNVPYQFSMSHFPNCKTKIILYNLKGEHWTVNSVPTTRVHTSHTLCGGWMAFVRGNSIKVGDVCIFELIRECELRVRIAEVGKDGLDCQVGKLACSMLSERHDVASHNTSRYMPKKPKVSSKCRTKVDLLDKKLSKIGQEPVLAIEFKKSGRASTTSKKMGLSPKSKASHKKTAVPRKHRVEDELSSQAKAGLRMLFALDEQRVAEAFTSPFPNFVKIMKKFNVSGSYTLKIPYQFSAAHLPAYKTEVTLRNSRGQCWIVNSVPDAKGRTIHTFCGGWIAFVRDNDINFGDTCIFELVSHYVMQINQSQMEIFCGKSRKRLEHFMHALPKTFSDNLKKKLPANVTLKGPSEIVWNIGLTTRGDTIYFTNGWQKFVKDHSLKQNDFLVFKYNGESQFEVLIFNGNTFCEKAASYFVQKCGQAHSPSSGGVEYSSPEKLWAEDIYWSYFKFTHFTLLLHTNFERQLALPKTFSDNLNKKLPENVTLKGPSGVTWNIRLTTRDGTVYFVDGWQQFMNDHSLKANDFLVCKYNGESHFEVLIFDGESFCEKEASYFVEKCGHAQTAQGGSNASQTNNSVEEVNTASNAGDSPEQFTDDAVPKTAAIQCPFLPTGKRTKRRRRSPKAANWEAASPNRSGKVDDHCIYSGASLSKSTALVEEKIAQSFSSSFPYFVKIIKAFNVSGSRTINIPHQFSTAHLPNSDTPIFLQNLKGEHWLVNSVTKTKIHTSHSLCGGWMDFVRGNSIKVGDVCIFELVQECEFRVRIIAEVGKDGLVLPR*