AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0055470

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0055470 MtrunA17_Chr1g0148791 98.343 905 11 2 1 904 1 902 0.0 1816
Msa0055470 MtrunA17_Chr3g0138311 83.807 914 121 8 1 904 1 897 0.0 1428
Msa0055470 MtrunA17_Chr1g0171711 58.469 431 155 7 484 904 370 786 9.91e-165 500
Msa0055470 MtrunA17_Chr1g0171711 39.474 418 154 17 1 396 1 341 4.20e-53 199
Msa0055470 MtrunA17_Chr7g0237271 40.465 818 353 23 120 904 68 784 2.85e-151 465
Msa0055470 MtrunA17_Chr7g0237271 82.759 87 15 0 2 88 8 94 4.56e-42 165
Msa0055470 MtrunA17_Chr7g0237241 53.271 428 171 8 487 904 367 775 9.14e-141 437
Msa0055470 MtrunA17_Chr7g0237241 80.682 88 17 0 2 89 8 95 1.96e-41 163
Msa0055470 MtrunA17_Chr7g0237241 32.444 225 113 8 120 326 68 271 1.02e-11 68.9
Msa0055470 MtrunA17_Chr4g0062881 49.649 427 176 9 479 904 69 457 9.19e-126 387
Msa0055470 MtrunA17_Chr2g0282401 52.395 334 139 5 585 904 461 788 8.83e-106 345
Msa0055470 MtrunA17_Chr4g0047051 42.336 274 154 3 632 904 38 308 2.93e-63 216
Msa0055470 MtrunA17_Chr4g0047071 41.696 283 150 7 632 904 5 282 3.14e-59 204
Msa0055470 MtrunA17_Chr4g0047091 38.811 286 167 5 622 904 86 366 4.55e-53 189
Msa0055470 MtrunA17_Chr4g0047061 41.473 258 141 5 650 904 80 330 2.25e-52 186
Msa0055470 MtrunA17_Chr4g0047101 38.843 242 127 5 621 857 23 248 8.56e-40 148
Msa0055470 MtrunA17_Chr4g0047111 40.000 150 65 3 708 857 7 131 1.04e-27 109
Msa0055470 MtrunA17_Chr1g0163021 75.385 65 14 1 792 854 19 83 9.92e-27 105
Msa0055470 MtrunA17_Chr1g0172501 28.428 299 197 10 612 903 264 552 2.74e-25 111
Msa0055470 MtrunA17_Chr3g0093681 28.283 297 196 10 614 903 266 552 1.71e-24 108
Msa0055470 MtrunA17_Chr4g0062891 31.343 201 88 3 12 212 22 172 6.60e-22 95.1
Msa0055470 MtrunA17_Chr5g0405851 28.115 313 191 13 614 903 148 449 6.74e-22 100
Msa0055470 MtrunA17_Chr3g0136971 28.947 228 154 6 627 849 422 646 1.22e-20 97.4
Msa0055470 MtrunA17_Chr6g0448921 28.879 232 153 8 637 863 30 254 8.13e-18 88.6
Msa0055470 MtrunA17_Chr6g0448921 24.762 210 150 4 699 903 6 212 7.42e-12 69.3
Msa0055470 MtrunA17_Chr1g0185501 26.316 285 162 8 624 903 27 268 2.24e-17 84.3
Msa0055470 MtrunA17_Chr4g0067151 27.686 242 158 8 632 862 86 321 3.39e-16 80.9
Msa0055470 MtrunA17_Chr4g0067151 26.829 287 151 10 632 903 35 277 1.65e-14 75.9
Msa0055470 MtrunA17_Chr1g0197551 26.582 237 158 6 631 866 58 279 4.01e-15 80.5
Msa0055470 MtrunA17_Chr2g0331981 24.365 197 137 4 630 817 63 256 2.74e-14 77.4
Msa0055470 MtrunA17_Chr4g0004241 24.873 197 136 4 630 817 63 256 2.80e-14 77.4
Msa0055470 MtrunA17_Chr1g0168391 27.807 187 129 4 638 819 238 423 3.31e-14 76.6
Msa0055470 MtrunA17_Chr5g0401661 23.843 281 150 9 620 841 386 661 6.95e-14 75.9
Msa0055470 MtrunA17_Chr5g0401661 27.168 173 113 4 617 778 513 683 1.46e-12 71.6
Msa0055470 MtrunA17_Chr5g0401661 21.231 325 216 11 612 903 323 640 3.97e-12 70.1
Msa0055470 MtrunA17_Chr2g0331961 21.801 211 159 3 613 817 48 258 1.67e-13 72.8
Msa0055470 MtrunA17_Chr4g0035611 25.316 237 161 6 631 866 58 279 2.51e-13 74.3
Msa0055470 MtrunA17_Chr4g0053651 30.061 163 101 4 626 777 415 575 2.74e-13 73.6
Msa0055470 MtrunA17_Chr4g0053651 25.448 279 146 10 620 841 281 554 1.10e-12 71.6
Msa0055470 MtrunA17_Chr4g0053651 21.875 320 212 11 615 903 221 533 1.87e-12 70.9
Msa0055470 MtrunA17_Chr2g0281451 25.909 220 152 7 637 851 29 242 5.49e-13 73.2
Msa0055470 MtrunA17_Chr2g0281451 24.762 210 150 4 699 903 5 211 1.94e-12 71.6
Msa0055470 MtrunA17_Chr8g0352821 21.192 302 217 11 612 903 174 464 1.28e-12 72.0
Msa0055470 MtrunA17_Chr8g0352821 22.422 223 166 4 603 820 204 424 1.05e-11 68.9
Msa0055470 MtrunA17_Chr7g0253861 23.132 281 205 8 632 902 63 342 2.55e-12 69.3
Msa0055470 MtrunA17_Chr5g0401671 29.268 164 103 4 626 778 432 593 4.03e-12 70.1
Msa0055470 MtrunA17_Chr5g0401671 23.767 223 151 7 632 841 355 571 6.70e-12 69.3
Msa0055470 MtrunA17_Chr5g0401671 21.053 323 217 11 612 903 235 550 1.73e-11 68.2
Msa0055470 MtrunA17_Chr4g0034491 25.316 237 148 9 681 904 34 254 4.17e-12 70.1
Msa0055470 MtrunA17_Chr8g0392701 25.403 248 162 11 638 871 30 268 5.09e-12 68.2
Msa0055470 MtrunA17_Chr2g0308391 23.636 330 210 11 609 904 111 432 1.56e-11 67.8
Msa0055470 MtrunA17_Chr1g0176241 25.424 295 159 11 660 903 113 397 2.08e-11 67.4
Msa0055470 MtrunA17_Chr4g0059031 24.138 203 138 5 638 826 462 662 7.93e-11 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0055470 AT4G32551.1 72.310 762 174 10 164 904 186 931 0.0 1043
Msa0055470 AT4G32551.2 97.727 88 2 0 1 88 1 88 5.45e-50 191
Msa0055470 AT2G32700.6 78.409 88 19 0 1 88 1 88 1.50e-39 158
Msa0055470 AT2G32700.6 35.407 209 103 7 137 326 80 275 2.68e-12 71.2
Msa0055470 AT2G32700.2 78.409 88 19 0 1 88 1 88 1.56e-39 158
Msa0055470 AT2G32700.2 35.407 209 103 7 137 326 80 275 2.97e-12 71.2
Msa0055470 AT2G32700.5 78.409 88 19 0 1 88 1 88 1.56e-39 158
Msa0055470 AT2G32700.5 35.407 209 103 7 137 326 80 275 2.97e-12 71.2
Msa0055470 AT2G32700.1 78.409 88 19 0 1 88 1 88 1.56e-39 158
Msa0055470 AT2G32700.1 35.407 209 103 7 137 326 80 275 2.97e-12 71.2
Msa0055470 AT2G32700.4 78.409 88 19 0 1 88 1 88 1.56e-39 158
Msa0055470 AT2G32700.4 35.407 209 103 7 137 326 80 275 2.97e-12 71.2
Msa0055470 AT2G32700.3 78.409 88 19 0 1 88 1 88 1.56e-39 158
Msa0055470 AT2G32700.3 35.407 209 103 7 137 326 80 275 2.97e-12 71.2
Msa0055470 AT2G32700.7 78.409 88 19 0 1 88 1 88 1.81e-39 158
Msa0055470 AT2G41500.1 28.369 282 188 9 629 903 261 535 7.72e-24 107
Msa0055470 AT2G41500.1 31.276 243 152 10 632 867 306 540 1.24e-17 87.8
Msa0055470 AT2G41500.2 28.369 282 188 9 629 903 261 535 7.72e-24 107
Msa0055470 AT2G41500.2 31.276 243 152 10 632 867 306 540 1.24e-17 87.8
Msa0055470 AT5G25150.1 28.509 228 155 6 627 849 421 645 1.67e-19 94.4
Msa0055470 AT5G25150.2 28.509 228 155 6 627 849 421 645 2.15e-19 94.0
Msa0055470 AT4G02730.1 25.166 302 211 10 614 904 33 330 4.80e-19 90.1
Msa0055470 AT2G33340.2 30.142 282 171 11 638 903 236 507 6.75e-19 91.7
Msa0055470 AT2G33340.1 30.142 282 171 11 638 903 236 507 6.75e-19 91.7
Msa0055470 AT5G08390.1 27.660 282 177 11 606 878 1 264 8.55e-19 92.4
Msa0055470 AT5G08390.1 25.714 210 148 4 699 903 6 212 4.70e-13 73.9
Msa0055470 AT2G33340.3 31.301 246 145 10 638 867 236 473 1.86e-18 90.1
Msa0055470 AT5G23430.3 27.305 282 178 11 606 878 1 264 3.09e-18 90.5
Msa0055470 AT5G23430.3 26.190 210 147 4 699 903 6 212 5.76e-13 73.6
Msa0055470 AT5G23430.2 27.305 282 178 11 606 878 1 264 3.09e-18 90.5
Msa0055470 AT5G23430.2 26.190 210 147 4 699 903 6 212 5.76e-13 73.6
Msa0055470 AT5G23430.1 27.305 282 178 11 606 878 1 264 3.26e-18 90.5
Msa0055470 AT5G23430.1 26.190 210 147 4 699 903 6 212 5.91e-13 73.6
Msa0055470 AT3G49660.1 25.676 296 200 11 623 903 22 312 3.37e-17 84.3
Msa0055470 AT1G61210.1 25.182 274 186 10 610 878 4 263 5.08e-16 83.6
Msa0055470 AT1G61210.1 25.943 212 145 5 699 903 5 211 2.61e-13 74.7
Msa0055470 AT1G61210.2 25.182 274 186 10 610 878 4 263 6.07e-16 83.6
Msa0055470 AT1G61210.2 25.943 212 145 5 699 903 5 211 3.45e-13 74.3
Msa0055470 AT1G61210.3 25.182 274 186 10 610 878 4 263 7.22e-16 83.2
Msa0055470 AT1G61210.3 25.943 212 145 5 699 903 5 211 4.50e-13 73.9
Msa0055470 AT1G04510.2 30.526 190 123 5 638 819 236 424 1.94e-15 80.9
Msa0055470 AT1G04510.1 30.526 190 123 5 638 819 236 424 2.13e-15 80.9
Msa0055470 AT3G15980.7 25.114 219 144 6 608 817 49 256 1.56e-14 78.6
Msa0055470 AT3G15980.3 25.114 219 144 6 608 817 49 256 1.59e-14 78.6
Msa0055470 AT3G15980.6 25.114 219 144 6 608 817 49 256 1.59e-14 78.6
Msa0055470 AT3G15980.2 25.114 219 144 6 608 817 49 256 1.59e-14 78.6
Msa0055470 AT3G15980.4 25.114 219 144 6 608 817 49 256 1.59e-14 78.6
Msa0055470 AT3G15980.1 25.114 219 144 6 608 817 49 256 1.60e-14 78.6
Msa0055470 AT3G15980.5 25.114 219 144 6 608 817 49 256 1.84e-14 78.6
Msa0055470 AT1G52360.4 23.762 202 132 4 630 817 63 256 2.12e-14 78.2
Msa0055470 AT1G52360.1 23.762 202 132 4 630 817 63 256 2.12e-14 78.2
Msa0055470 AT1G52360.3 23.762 202 132 4 630 817 63 256 2.34e-14 78.2
Msa0055470 AT2G21390.1 26.354 277 184 10 631 904 58 317 3.06e-14 77.8
Msa0055470 AT1G62020.1 25.000 276 189 8 631 904 58 317 3.57e-14 77.8
Msa0055470 AT1G52360.2 23.762 202 132 4 630 817 107 300 3.95e-14 77.4
Msa0055470 AT1G11160.1 25.455 220 153 7 637 851 29 242 4.25e-14 77.4
Msa0055470 AT1G11160.1 27.230 213 141 6 699 903 5 211 2.11e-13 75.1
Msa0055470 AT1G11160.1 24.868 189 131 7 681 864 31 213 1.92e-12 72.0
Msa0055470 AT1G11160.1 26.606 218 149 8 608 818 81 294 1.95e-11 68.6
Msa0055470 AT1G11160.2 25.455 220 153 7 637 851 29 242 5.22e-14 77.0
Msa0055470 AT1G11160.2 27.230 213 141 6 699 903 5 211 2.57e-13 74.7
Msa0055470 AT1G11160.2 24.868 189 131 7 681 864 31 213 2.44e-12 71.6
Msa0055470 AT1G11160.2 26.606 218 149 8 608 818 81 294 2.25e-11 68.6
Msa0055470 AT1G11160.4 25.455 220 153 7 637 851 29 242 6.97e-14 76.6
Msa0055470 AT1G11160.4 27.230 213 141 6 699 903 5 211 3.46e-13 74.3
Msa0055470 AT1G11160.4 24.868 189 131 7 681 864 31 213 2.99e-12 71.2
Msa0055470 AT1G11160.4 26.606 218 149 8 608 818 81 294 2.86e-11 68.2
Msa0055470 AT5G13480.1 24.775 222 160 5 604 820 145 364 1.68e-13 75.1
Msa0055470 AT5G13480.3 24.775 222 160 5 604 820 133 352 1.75e-13 74.7
Msa0055470 AT5G13480.4 24.775 222 160 5 604 820 133 352 1.91e-13 74.7
Msa0055470 AT5G13480.2 24.775 222 160 5 604 820 156 375 2.98e-13 74.3
Msa0055470 AT1G79990.1 22.791 215 144 4 617 817 50 256 7.95e-13 73.2
Msa0055470 AT1G79990.2 22.791 215 144 4 617 817 50 256 9.00e-13 72.8
Msa0055470 AT1G48630.1 30.667 225 123 11 624 820 105 324 1.45e-12 70.5
Msa0055470 AT3G42660.1 30.303 198 124 7 632 817 70 265 2.19e-12 71.6
Msa0055470 AT1G71840.1 25.939 293 196 9 625 904 114 398 2.20e-12 70.5
Msa0055470 AT1G18080.1 26.506 249 159 13 638 871 30 269 4.93e-12 68.6
Msa0055470 AT3G18130.1 29.778 225 125 10 624 820 105 324 6.41e-12 68.2
Msa0055470 AT3G18130.1 26.210 248 160 13 638 871 30 268 4.18e-11 65.9
Msa0055470 AT1G11160.3 26.606 218 149 8 608 818 39 252 2.35e-11 68.6
Msa0055470 AT1G11160.3 25.301 166 114 6 704 864 11 171 2.58e-11 68.2
Msa0055470 AT2G43770.1 23.967 242 161 10 620 846 92 325 4.90e-11 65.9

Find 246 sgRNAs with CRISPR-Local

Find 921 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCTACTGAATACTCGAAATA+TGG 0.215012 1_2:+10493145 Msa0055470:CDS
CTTTCTTCCAGGCTGGCTTT+TGG 0.220270 1_2:-10493800 None:intergenic
GGCTGCTTTCTCTTTCTTCC+AGG 0.229511 1_2:-10493811 None:intergenic
TCCCCTTCAAAGGGATTCTT+TGG 0.239715 1_2:+10490939 Msa0055470:CDS
TCTGTCAGGGTTTGGACTCT+TGG 0.262727 1_2:+10501491 Msa0055470:CDS
TTCAGTATTGAAGCATGATT+TGG 0.269507 1_2:-10491098 None:intergenic
GGATCCTTCTGGAGAGTTCC+TGG 0.277296 1_2:+10501451 Msa0055470:CDS
TCCTTCGGGACCCGCAGCTC+TGG 0.277649 1_2:-10491941 None:intergenic
CAGATAAGGTCATCTTTATT+AGG 0.280319 1_2:-10497323 None:intergenic
ATTTGAGATAAGCGGGAAAA+AGG 0.287558 1_2:-10502303 None:intergenic
TATTCGCTTCGTACCTTCAC+TGG 0.290402 1_2:+10497266 Msa0055470:CDS
TTTGCAGACTCAGTTAATTA+AGG 0.290580 1_2:+10490576 Msa0055470:intron
TCTGTTTGTTGGGATCCTTC+TGG 0.297006 1_2:+10501440 Msa0055470:CDS
CTGTTGCTGCTGCTGCTCCC+TGG 0.311995 1_2:-10490599 None:intergenic
TCAGTGCTAAACATCATTAA+TGG 0.313948 1_2:-10493988 None:intergenic
TCAGCATGTCTCAGACTAAC+TGG 0.318900 1_2:+10488910 Msa0055470:exon
GCAGCTACTGGCCAGCCGTC+AGG 0.331144 1_2:+10491128 Msa0055470:CDS
GCAACAGCAACAGCAACAAC+AGG 0.334166 1_2:+10490807 Msa0055470:CDS
GTCAATACATTCTGTTTGTT+GGG 0.338402 1_2:+10501430 Msa0055470:CDS
ATGACAAAACTGTCCGGGTT+TGG 0.345150 1_2:+10496744 Msa0055470:CDS
TGACAAAACTGTCCGGGTTT+GGG 0.347644 1_2:+10496745 Msa0055470:CDS
AAGTGGTGGTCATGACAAAA+AGG 0.363329 1_2:+10496426 Msa0055470:CDS
GCTGTTGCTGCTGTTGCTGC+TGG 0.364074 1_2:-10490720 None:intergenic
AAGCAGCCTGTATCTTCTTC+TGG 0.371031 1_2:+10493826 Msa0055470:CDS
ATTCGCCGTTCCTGAGCTAT+TGG 0.374104 1_2:-10493854 None:intergenic
CTGTCAGTGAGGACTCTGTC+AGG 0.374353 1_2:+10501477 Msa0055470:CDS
TATTCCGTACAGCAAAGATT+TGG 0.380314 1_2:+10491059 Msa0055470:intron
AACCAACCTTTAGAGAATAT+CGG 0.380809 1_2:-10497626 None:intergenic
GTGAGGACTCTGTCAGGGTT+TGG 0.381071 1_2:+10501483 Msa0055470:CDS
ATGCCTTCTTTACCTCATAA+TGG 0.384032 1_2:+10493952 Msa0055470:CDS
AGTCAATACATTCTGTTTGT+TGG 0.384526 1_2:+10501429 Msa0055470:CDS
ATCACCATTCTTGTTTACTT+TGG 0.387758 1_2:+10502230 Msa0055470:three_prime_UTR
CAGAGTCATCGTCTTGTTCT+CGG 0.399834 1_2:-10501937 None:intergenic
GGTTTGGATCAACTTCGTTC+TGG 0.400659 1_2:+10492972 Msa0055470:CDS
CCCTCTTCACAAGGTAATCA+TGG 0.400979 1_2:-10489391 None:intergenic
TGATAAGGATATTGAATTGC+AGG 0.401833 1_2:+10494139 Msa0055470:CDS
TCTGTATCCCCACGAGGAAA+TGG 0.402442 1_2:-10493248 None:intergenic
ATATTATATTGTCCAATTTG+AGG 0.406766 1_2:-10502271 None:intergenic
GCTTTCTCTTTCTTCCAGGC+TGG 0.411154 1_2:-10493807 None:intergenic
CTGGCCGTTTCAACTGTAAA+CGG 0.415285 1_2:+10501987 Msa0055470:CDS
TGAAGGTGAGGTAAGAGTTC+CGG 0.416306 1_2:-10494016 None:intergenic
CGTTTCAACTGTAAACGGTT+TGG 0.422095 1_2:+10501992 Msa0055470:CDS
AGCATGTCAAACTCCTTTAG+AGG 0.423665 1_2:+10493582 Msa0055470:CDS
AGGGTTTGGACTCTTGGATC+CGG 0.427106 1_2:+10501497 Msa0055470:CDS
TACCTCACCTTCAAACCAAT+TGG 0.427331 1_2:+10494026 Msa0055470:CDS
AATTGCCATCAATGATCCTT+CGG 0.429714 1_2:-10491956 None:intergenic
CACAATCACAAGAGCAGATA+AGG 0.434305 1_2:-10497337 None:intergenic
GGCTGTGGACTTTGTATGAA+AGG 0.435451 1_2:-10493014 None:intergenic
TATTCTTCACTGTTGGTCAT+TGG 0.436333 1_2:+10501593 Msa0055470:CDS
GTGATGGAGAGATAAGATAT+TGG 0.437754 1_2:+10497357 Msa0055470:CDS
GTTGCAAGACGAGGCATGCT+TGG 0.439452 1_2:-10496713 None:intergenic
CCTTCGGGACCCGCAGCTCT+GGG 0.440207 1_2:-10491940 None:intergenic
GCTATAGCATTTGCAGTGCT+AGG 0.440653 1_2:-10490886 None:intergenic
GGATCATTGATGGCAATTCC+TGG 0.445159 1_2:+10491961 Msa0055470:CDS
CTACTGAATACTCGAAATAT+GGG 0.447589 1_2:+10493146 Msa0055470:CDS
CTTACATCCATACGTCCAAC+TGG 0.450306 1_2:-10494248 None:intergenic
TGTTGAAGTTGCTGCTGTTG+TGG 0.451169 1_2:-10493456 None:intergenic
CTATAGCATTTGCAGTGCTA+GGG 0.452062 1_2:-10490885 None:intergenic
ATTGCCATCAATGATCCTTC+GGG 0.454467 1_2:-10491955 None:intergenic
GATTGCAGCTATTGACGCTC+CGG 0.455090 1_2:+10489562 Msa0055470:intron
TTGAATGGTGGTGGTGCAAA+TGG 0.456464 1_2:+10490850 Msa0055470:CDS
AGAAAAGAAAGAGGAATTTG+AGG 0.456890 1_2:-10488772 None:intergenic
TGGAGGACCACCTGCTTGAA+GGG 0.457373 1_2:-10493228 None:intergenic
CATCAGCAAGATAATAAAGT+AGG 0.460968 1_2:+10493528 Msa0055470:CDS
AAAGAAAGAGAGGAAATTGA+AGG 0.461183 1_2:-10488888 None:intergenic
ATGGAGGACCACCTGCTTGA+AGG 0.461767 1_2:-10493229 None:intergenic
GGTTAAAACTTCCCCTTCAA+AGG 0.463050 1_2:+10490929 Msa0055470:CDS
CTGAAGTCTTCTGCAGCTAC+TGG 0.463767 1_2:+10491116 Msa0055470:CDS
GGAGGTGGTGGAAGTGTCAC+CGG 0.464291 1_2:+10493552 Msa0055470:CDS
CTTCCAAAGAATCCCTTTGA+AGG 0.464358 1_2:-10490942 None:intergenic
CTCTTGGATCCGGGAGTGAA+GGG 0.464635 1_2:+10501507 Msa0055470:CDS
ATACGTCCAACTGGATCTCT+AGG 0.467235 1_2:-10494239 None:intergenic
TCTGGGACATATTCATTGCC+AGG 0.468489 1_2:+10489615 Msa0055470:CDS
AAGGTTTCCAAAAGCCAGCC+TGG 0.469080 1_2:+10493793 Msa0055470:intron
ATGACAGGTTTGTCAAGCTC+TGG 0.469781 1_2:+10502030 Msa0055470:CDS
TTTGGAAGATGCTGCAATGA+AGG 0.471073 1_2:+10490957 Msa0055470:CDS
TCGAAATATGGGCGTAGGTA+AGG 0.473330 1_2:+10493157 Msa0055470:CDS
TTGCTTCTGCCAGTCATGAC+AGG 0.476091 1_2:+10502015 Msa0055470:CDS
CAGCTACTGGCCAGCCGTCA+GGG 0.476806 1_2:+10491129 Msa0055470:CDS
TGTGGTGATTGCTGAGGTTG+TGG 0.478321 1_2:-10490631 None:intergenic
GTTAAAACTTCCCCTTCAAA+GGG 0.479667 1_2:+10490930 Msa0055470:CDS
GGATTTGAAAGCTTCTGCTC+AGG 0.480442 1_2:+10489412 Msa0055470:CDS
GCTCGTAGTCAGCAACTACC+AGG 0.480624 1_2:+10491792 Msa0055470:CDS
TTTGATACAACATCACCAAC+AGG 0.480943 1_2:-10493194 None:intergenic
TCACTCACCAATTGGTTTGA+AGG 0.481107 1_2:-10494033 None:intergenic
GTTCATGAGCTTAGCTGTAA+TGG 0.482292 1_2:+10501536 Msa0055470:CDS
TGCTTCAATTTGAGATAAGC+GGG 0.485783 1_2:-10502310 None:intergenic
ATGGTACACCGGCCAGGTTA+AGG 0.486392 1_2:-10502059 None:intergenic
CGAATGCTTCTCGTTCGTCC+TGG 0.487054 1_2:-10489633 None:intergenic
AAGATTTGGAGACCAACTCT+TGG 0.491258 1_2:+10491073 Msa0055470:CDS
GTTGGTCATTGGCTGTTACC+AGG 0.492797 1_2:+10501604 Msa0055470:CDS
GCCGTTCCTGAGCTATTGGC+AGG 0.493632 1_2:-10493850 None:intergenic
TTTGTTCCAGGATCAAATCA+AGG 0.493877 1_2:+10492187 Msa0055470:intron
GGTGGTGCAAATGGATTAGT+TGG 0.495463 1_2:+10490859 Msa0055470:CDS
AACACATTCCCCTTCACTCC+CGG 0.496713 1_2:-10501516 None:intergenic
CTCCTTTAGAGGAAATGATC+AGG 0.498610 1_2:+10493593 Msa0055470:CDS
GTGGTCCTCCATTTCCTCGT+GGG 0.498686 1_2:+10493240 Msa0055470:CDS
ATCAGCAAGATAATAAAGTA+GGG 0.498935 1_2:+10493529 Msa0055470:CDS
GCAGCTCTGGGATTCAATAC+AGG 0.499386 1_2:-10491928 None:intergenic
CTTCATATGACAAAACTGTC+CGG 0.501200 1_2:+10496738 Msa0055470:CDS
GGTGGAAGTGTCACCGGAGA+TGG 0.501260 1_2:+10493558 Msa0055470:CDS
AACATTGGAAGTTGATGAAA+AGG 0.502215 1_2:-10493035 None:intergenic
CGACGGTCTTATTGCTGCAC+TGG 0.504027 1_2:+10501968 Msa0055470:CDS
CTACCATTATGAGGTAAAGA+AGG 0.504668 1_2:-10493955 None:intergenic
GGCAACAATTTGACTCTGAA+AGG 0.505531 1_2:+10492211 Msa0055470:CDS
GGGTTTGGACTCTTGGATCC+GGG 0.509335 1_2:+10501498 Msa0055470:CDS
GATAGGGCTCATCTCTTGAA+TGG 0.510034 1_2:+10490835 Msa0055470:CDS
TCTGGTCCTGCCAATAGCTC+AGG 0.511262 1_2:+10493844 Msa0055470:CDS
CTCTGGAAGTGACCTTAACC+TGG 0.511872 1_2:+10502047 Msa0055470:exon
CACCAATTGGTTTGAAGGTG+AGG 0.512905 1_2:-10494028 None:intergenic
AAGTTGCTGCTGTTGTGGAT+TGG 0.513253 1_2:-10493451 None:intergenic
TAGAGATCCAGTTGGACGTA+TGG 0.514732 1_2:+10494241 Msa0055470:CDS
CCATGATTACCTTGTGAAGA+GGG 0.515237 1_2:+10489391 Msa0055470:CDS
ATTCGCTTCGTACCTTCACT+GGG 0.516583 1_2:+10497267 Msa0055470:CDS
ACTCTTGGATCCGGGAGTGA+AGG 0.516593 1_2:+10501506 Msa0055470:CDS
AGACTCAGTTAATTAAGGCC+AGG 0.517269 1_2:+10490581 Msa0055470:intron
TGCTGCTGCTGCTGTTGATG+TGG 0.517296 1_2:-10490649 None:intergenic
GGGTCCCGAAGGATCATTGA+TGG 0.518120 1_2:+10491951 Msa0055470:CDS
TCAGGAACGGCGAATACAGC+AGG 0.518900 1_2:+10493862 Msa0055470:CDS
GGTGATGTTGTATCAAATGT+TGG 0.519063 1_2:+10493200 Msa0055470:CDS
TATAGCAACAAAGATGTATG+AGG 0.521157 1_2:+10490903 Msa0055470:CDS
TATTGAATTGCAGGCAGATG+TGG 0.524531 1_2:+10494148 Msa0055470:CDS
GTTTGACATGCTACCATCTC+CGG 0.525166 1_2:-10493571 None:intergenic
CACTGGCAGAAGGTGATGCC+AGG 0.525453 1_2:-10493100 None:intergenic
TTAGAAGAACTACCATTATG+AGG 0.525961 1_2:-10493964 None:intergenic
TTAATGATGTTTAGCACTGA+TGG 0.526495 1_2:+10493991 Msa0055470:CDS
TCAGCACCCTCAACTCCCTC+AGG 0.530325 1_2:+10493898 Msa0055470:CDS
GGAGTTGAGGGTGCTGAACT+CGG 0.531351 1_2:-10493892 None:intergenic
ATCTGCTCTTGTGATTGTGA+TGG 0.532028 1_2:+10497341 Msa0055470:CDS
GTATTGAATCCCAGAGCTGC+GGG 0.532097 1_2:+10491931 Msa0055470:CDS
AGCAACAACAGGGTAGGGAT+AGG 0.532280 1_2:+10490818 Msa0055470:CDS
CAAACCGTTTACAGTTGAAA+CGG 0.534008 1_2:-10501991 None:intergenic
TTCCAAAGAATCCCTTTGAA+GGG 0.534349 1_2:-10490941 None:intergenic
TATGTTAGCTCAGCAGAACC+TGG 0.534495 1_2:+10493082 Msa0055470:CDS
CAGGACGAACGAGAAGCATT+CGG 0.536737 1_2:+10489634 Msa0055470:CDS
CTTGACAAACCTGTCATGAC+TGG 0.537092 1_2:-10502024 None:intergenic
GAGGCATGCTTGGACTGAAA+CGG 0.537352 1_2:-10496703 None:intergenic
GACCTGATCATTTCCTCTAA+AGG 0.538061 1_2:-10493595 None:intergenic
ATGAGATTTCAACCTCGGCT+AGG 0.539848 1_2:+10497540 Msa0055470:CDS
GCTCATCTCTTGAATGGTGG+TGG 0.541010 1_2:+10490841 Msa0055470:CDS
TTCATATGACAAAACTGTCC+GGG 0.541877 1_2:+10496739 Msa0055470:CDS
ATCTCCAAAGTAAACAAGAA+TGG 0.541887 1_2:-10502234 None:intergenic
GTTGAGCCTGAGGGAGTTGA+GGG 0.543304 1_2:-10493904 None:intergenic
TTTCACCAATTAGGGTGGCA+TGG 0.543529 1_2:+10497512 Msa0055470:intron
TGAGATTTCAACCTCGGCTA+GGG 0.544412 1_2:+10497541 Msa0055470:CDS
AAGAAAATTACCCTGACGGC+TGG 0.546194 1_2:-10491139 None:intergenic
GCAACAACAGGGTAGGGATA+GGG 0.546406 1_2:+10490819 Msa0055470:CDS
ATTGCAGCTATTGACGCTCC+GGG 0.546824 1_2:+10489563 Msa0055470:intron
ATGCTTCAATTTGAGATAAG+CGG 0.547287 1_2:-10502311 None:intergenic
TCAGGCTCAACTCATACGCC+TGG 0.547499 1_2:+10493916 Msa0055470:CDS
GCAGGACCAGAAGAAGATAC+AGG 0.547791 1_2:-10493832 None:intergenic
CTTTCAAATCCCTCTTCACA+AGG 0.552981 1_2:-10489400 None:intergenic
GACTCAGTTAATTAAGGCCA+GGG 0.553687 1_2:+10490582 Msa0055470:intron
ACAACAATGGTACACCGGCC+AGG 0.556515 1_2:-10502065 None:intergenic
CCCAGAGCTGCGGGTCCCGA+AGG 0.562961 1_2:+10491940 Msa0055470:CDS
GTTGGATCGCCCCTTCAAGC+AGG 0.563914 1_2:+10493218 Msa0055470:CDS
CACAGATGAGATTTCAACCT+CGG 0.564308 1_2:+10497535 Msa0055470:CDS
CATGATTTGGATCCAAGAGT+TGG 0.564748 1_2:-10491085 None:intergenic
GGAAAATTGCTTGCAAGTGG+TGG 0.565204 1_2:+10496412 Msa0055470:CDS
CAGCATGTCTCAGACTAACT+GGG 0.568318 1_2:+10488911 Msa0055470:exon
CAGTTGTGCTAGAGTGTCAA+AGG 0.569797 1_2:+10497394 Msa0055470:CDS
GGCATTGATATCACATCACC+AGG 0.574381 1_2:-10493934 None:intergenic
GAGTCTTCTACTATCATCAC+TGG 0.575360 1_2:-10493117 None:intergenic
CAACAGCAACAGCAACAACA+GGG 0.577764 1_2:+10490808 Msa0055470:CDS
AGTTGAGCCTGAGGGAGTTG+AGG 0.578185 1_2:-10493905 None:intergenic
AAGAAAGAGAGGAAATTGAA+GGG 0.578375 1_2:-10488887 None:intergenic
GAGGGTGCTGAACTCGGAGA+TGG 0.581484 1_2:-10493886 None:intergenic
AGCATGCCGATATTCTCTAA+AGG 0.582189 1_2:+10497620 Msa0055470:CDS
CAACAAAGATGTATGAGGAA+AGG 0.582289 1_2:+10490908 Msa0055470:CDS
CATTGTCAACATCCCAAACC+CGG 0.582820 1_2:-10496757 None:intergenic
TGTAGCCATTTCTCATCCGA+CGG 0.583371 1_2:+10496391 Msa0055470:CDS
TCCAAAGAATCCCTTTGAAG+GGG 0.584726 1_2:-10490940 None:intergenic
ACAGTGAAGAATACGTTGGA+TGG 0.585218 1_2:-10501583 None:intergenic
GCAACAATTTGACTCTGAAA+GGG 0.587520 1_2:+10492212 Msa0055470:CDS
TCTTGGATCCGGGAGTGAAG+GGG 0.588423 1_2:+10501508 Msa0055470:CDS
GGATACAGATATGCTAATGA+AGG 0.589638 1_2:+10493262 Msa0055470:CDS
TGTCAGTGAGGACTCTGTCA+GGG 0.589779 1_2:+10501478 Msa0055470:CDS
GGAAGTGACCTTAACCTGGC+CGG 0.591653 1_2:+10502051 Msa0055470:exon
AGCTGCAGAATGCCCAGTGA+AGG 0.591836 1_2:-10497279 None:intergenic
AATACTCGAAATATGGGCGT+AGG 0.592234 1_2:+10493152 Msa0055470:CDS
AGTCCTCACTGACAGATGCC+AGG 0.592927 1_2:-10501469 None:intergenic
ACACAGAGGAGAAAAGAAAG+AGG 0.593818 1_2:-10488781 None:intergenic
AACATTGTATTGTACAACAA+TGG 0.594770 1_2:-10502078 None:intergenic
TGTTGTTGCTGCTGATGTTG+CGG 0.595294 1_2:-10490778 None:intergenic
TCCAACGTATTCTTCACTGT+TGG 0.596123 1_2:+10501586 Msa0055470:CDS
GGGTATTGAAGAAATGAAAG+AGG 0.597480 1_2:-10488867 None:intergenic
GGATCGCCCCTTCAAGCAGG+TGG 0.597620 1_2:+10493221 Msa0055470:CDS
GATGGCCTTTCAAATCCTGT+TGG 0.598824 1_2:+10493179 Msa0055470:CDS
ATCTGCAGTCATTGGAGCTG+TGG 0.600675 1_2:+10501907 Msa0055470:intron
TGCAACATATGCTGTTACAG+AGG 0.602398 1_2:+10490692 Msa0055470:CDS
GCAACAGCAACAACAGGGTA+GGG 0.604132 1_2:+10490813 Msa0055470:CDS
TACGTCCAACTGGATCTCTA+GGG 0.604560 1_2:-10494238 None:intergenic
CGTTCTCTGCAGCTGCAGCA+AGG 0.605390 1_2:-10497569 None:intergenic
CATCACCAACAGGATTTGAA+AGG 0.605402 1_2:-10493184 None:intergenic
GGAGGACCACCTGCTTGAAG+GGG 0.605415 1_2:-10493227 None:intergenic
ATGTTTAGCACTGATGGCAC+CGG 0.605485 1_2:+10493997 Msa0055470:CDS
TGTTGATGTGGTGATTGCTG+AGG 0.605664 1_2:-10490637 None:intergenic
AGCAACAGCAACAACAGGGT+AGG 0.605756 1_2:+10490812 Msa0055470:CDS
GACGGAAAATTGCTTGCAAG+TGG 0.606521 1_2:+10496409 Msa0055470:CDS
AGGGCTCATCTCTTGAATGG+TGG 0.606617 1_2:+10490838 Msa0055470:CDS
CTACTATCATCACTGGCAGA+AGG 0.607982 1_2:-10493110 None:intergenic
GGTGGTCCTCCATTTCCTCG+TGG 0.608120 1_2:+10493239 Msa0055470:CDS
AAAGGTTTACTCACTGTGAG+TGG 0.609300 1_2:-10492238 None:intergenic
AGACATGCTGAAAGAAAGAG+AGG 0.610241 1_2:-10488898 None:intergenic
TCCATGATTACCTTGTGAAG+AGG 0.610323 1_2:+10489390 Msa0055470:CDS
AATATGGGCGTAGGTAAGGA+TGG 0.611082 1_2:+10493161 Msa0055470:CDS
TCTAAAGAAAATTACCCTGA+CGG 0.611543 1_2:-10491143 None:intergenic
TGACTACGAGCTTGAACTTG+TGG 0.613035 1_2:-10491780 None:intergenic
AGATGTGGACCGCTTTGTAG+AGG 0.617490 1_2:+10494163 Msa0055470:CDS
AAGTAACAGTTACAAAAGAG+AGG 0.621241 1_2:-10488817 None:intergenic
GAATGGTGATAATGTTACAA+AGG 0.624258 1_2:-10502217 None:intergenic
GGAAGTTGATGAAAAGGCTG+TGG 0.628184 1_2:-10493029 None:intergenic
ACAATTTGACTCTGAAAGGG+TGG 0.630266 1_2:+10492215 Msa0055470:CDS
GCAACTACCAGGGTCTACTC+CGG 0.631962 1_2:+10491803 Msa0055470:CDS
GTGGACCGCTTTGTAGAGGA+CGG 0.632310 1_2:+10494167 Msa0055470:CDS
TGGTCCTCCATTTCCTCGTG+GGG 0.634330 1_2:+10493241 Msa0055470:CDS
GGACGTATGGATGTAAGCAA+AGG 0.635039 1_2:+10494254 Msa0055470:CDS
GGCGTATGAGTTGAGCCTGA+GGG 0.635232 1_2:-10493913 None:intergenic
AGTTGCCGCGTCTTATATCG+AGG 0.635845 1_2:+10489658 Msa0055470:CDS
TATGAAGATGTTGCAAGACG+AGG 0.637608 1_2:-10496722 None:intergenic
TGTATTGAATCCCAGAGCTG+CGG 0.638089 1_2:+10491930 Msa0055470:CDS
GTATCCCCACGAGGAAATGG+AGG 0.651335 1_2:-10493245 None:intergenic
TAGTGTACCGGAGTAGACCC+TGG 0.651767 1_2:-10491810 None:intergenic
TGATGTTGTTGTGTCAACAT+TGG 0.655149 1_2:-10493050 None:intergenic
TCCTGCCAATAGCTCAGGAA+CGG 0.657617 1_2:+10493849 Msa0055470:CDS
TCAGCAAGATAATAAAGTAG+GGG 0.658150 1_2:+10493530 Msa0055470:CDS
CAGCAAGATAATAAAGTAGG+GGG 0.658348 1_2:+10493531 Msa0055470:CDS
ACCAACAGTGAAGAATACGT+TGG 0.659507 1_2:-10501587 None:intergenic
GATGCCAGGAACTCTCCAGA+AGG 0.660319 1_2:-10501455 None:intergenic
GCAAGGAATCTCCCTAGCCG+AGG 0.665628 1_2:-10497552 None:intergenic
ACAGACCCTAGAGATCCAGT+TGG 0.673213 1_2:+10494233 Msa0055470:CDS
AAGGTACGAAGCGAATACCC+AGG 0.675611 1_2:-10497260 None:intergenic
AGGCGTATGAGTTGAGCCTG+AGG 0.676286 1_2:-10493914 None:intergenic
ATTGTACAACAATGGTACAC+CGG 0.677165 1_2:-10502070 None:intergenic
CTCGTAGTCAGCAACTACCA+GGG 0.685612 1_2:+10491793 Msa0055470:CDS
AAAGTGTCTTCTGATCCTGT+TGG 0.686159 1_2:+10489452 Msa0055470:CDS
GTTCCTGGCATCTGTCAGTG+AGG 0.686596 1_2:+10501466 Msa0055470:CDS
AGATATTGGAGTATTAACAA+TGG 0.687323 1_2:+10497371 Msa0055470:CDS
ATGACTCTGTCTGCTCACGA+CGG 0.693324 1_2:+10501951 Msa0055470:CDS
GCAGCTATTGACGCTCCGGG+AGG 0.699589 1_2:+10489566 Msa0055470:intron
GAGATCCGTCCTCTACAAAG+CGG 0.708859 1_2:-10494172 None:intergenic
CATGTCTCAGACTAACTGGG+AGG 0.733150 1_2:+10488914 Msa0055470:exon
GTTCCAGGATCAAATCAAGG+TGG 0.734317 1_2:+10492190 Msa0055470:intron
ACCAACCTCGATATAAGACG+CGG 0.738906 1_2:-10489663 None:intergenic
GCACAGAAACATGAACACAG+AGG 0.749231 1_2:-10488795 None:intergenic
AGCATATCTGTATCCCCACG+AGG 0.751833 1_2:-10493254 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAATTAATATTAAAATAAA+AGG - chr1_2:10492259-10492278 None:intergenic 0.0%
!!! TTTTTTTCAGTTTTAAAAAA+TGG + chr1_2:10488979-10488998 Msa0055470:intron 10.0%
!!! TTTTTTCAGTTTTAAAAAAT+GGG + chr1_2:10488980-10488999 Msa0055470:intron 10.0%
!!! TTTTGTTCATTTTATTAATT+TGG + chr1_2:10489506-10489525 Msa0055470:intron 10.0%
!!! TCTTAATAATCAATTTTTAT+TGG + chr1_2:10489961-10489980 Msa0055470:intron 10.0%
!!! AGTTAACAATAAATTTTTAT+TGG + chr1_2:10490035-10490054 Msa0055470:intron 10.0%
!! AAATAAAACTTTATTCTTTA+AGG - chr1_2:10491536-10491555 None:intergenic 10.0%
!! ATTTATTAGATACAAATATT+GGG - chr1_2:10492891-10492910 None:intergenic 10.0%
!! AAATTATGATAGATAAAATT+TGG - chr1_2:10494291-10494310 None:intergenic 10.0%
!! TTATAAACAATAATTATTGA+AGG + chr1_2:10495430-10495449 Msa0055470:intron 10.0%
!! TATAAACAATAATTATTGAA+GGG + chr1_2:10495431-10495450 Msa0055470:intron 10.0%
!!! ACCTTAATAAAAATTTTAAA+TGG + chr1_2:10498691-10498710 Msa0055470:intron 10.0%
!!! AAATGAGAAAATATTTTATA+TGG - chr1_2:10498995-10499014 None:intergenic 10.0%
!! TTATGAAAATGAAATTAAAT+GGG - chr1_2:10500202-10500221 None:intergenic 10.0%
!! AAGAAAAAAAAAAATCGAAA+TGG - chr1_2:10488752-10488771 None:intergenic 15.0%
!!! ATTTTGTTTTTTGATGATTT+AGG + chr1_2:10489020-10489039 Msa0055470:intron 15.0%
!!! TTTTTTGTTTGTTTTTGTAA+TGG + chr1_2:10489531-10489550 Msa0055470:intron 15.0%
!! TATTCGTGTATTATTATATA+AGG + chr1_2:10489819-10489838 Msa0055470:intron 15.0%
!! GTATTATTATATAAGGAATA+AGG + chr1_2:10489826-10489845 Msa0055470:intron 15.0%
!! GCAAAAATATAAAAACAAAT+CGG - chr1_2:10490342-10490361 None:intergenic 15.0%
!! GAAAAAAGAAAAATCAATAA+AGG - chr1_2:10491175-10491194 None:intergenic 15.0%
!!! TGTTATTAGGTTTTTATATT+GGG + chr1_2:10492594-10492613 Msa0055470:intron 15.0%
!! CATTTATTAGATACAAATAT+TGG - chr1_2:10492892-10492911 None:intergenic 15.0%
!! AAATTTATATGCAAATGTAA+TGG - chr1_2:10494320-10494339 None:intergenic 15.0%
!! AATTTAACATGTATATATAC+CGG - chr1_2:10494345-10494364 None:intergenic 15.0%
!! TTGTAAAATTTATAAACTGT+AGG + chr1_2:10495189-10495208 Msa0055470:intron 15.0%
!!! AACTAAACTATAAGTTTTTT+TGG - chr1_2:10495321-10495340 None:intergenic 15.0%
!! AAAAACTTATAGTTTAGTTA+TGG + chr1_2:10495322-10495341 Msa0055470:intron 15.0%
!! AAAACTTATAGTTTAGTTAT+GGG + chr1_2:10495323-10495342 Msa0055470:intron 15.0%
!! ATAAACAATAATTATTGAAG+GGG + chr1_2:10495432-10495451 Msa0055470:intron 15.0%
!!! ATTCATGTAATATTTTGATA+AGG + chr1_2:10495920-10495939 Msa0055470:intron 15.0%
!!! TTCCTATATATAAATTTTGA+TGG + chr1_2:10497166-10497185 Msa0055470:intron 15.0%
!! ATCCATCAAAATTTATATAT+AGG - chr1_2:10497171-10497190 None:intergenic 15.0%
!!! TATATTTTTTTTCACCAATT+AGG + chr1_2:10497503-10497522 Msa0055470:intron 15.0%
!!! ATATTTTTTTTCACCAATTA+GGG + chr1_2:10497504-10497523 Msa0055470:intron 15.0%
!! AACAATCAATTTACTTAAAT+TGG - chr1_2:10497763-10497782 None:intergenic 15.0%
!!! ATTTGAAATGAAATTCAAAT+TGG - chr1_2:10497999-10498018 None:intergenic 15.0%
!! ATGAAAATAAAGATGTTATT+TGG - chr1_2:10498125-10498144 None:intergenic 15.0%
!! ATATACATAAATAAAAGAGT+CGG + chr1_2:10498217-10498236 Msa0055470:intron 15.0%
!! TCAAAGAAAAATTAAACTAA+AGG + chr1_2:10498434-10498453 Msa0055470:intron 15.0%
!! AAGATATTTAAATAATGAGA+AGG - chr1_2:10498619-10498638 None:intergenic 15.0%
!!! GCCATTTAAAATTTTTATTA+AGG - chr1_2:10498695-10498714 None:intergenic 15.0%
!! ATGAGATAATTTATATTGAA+TGG - chr1_2:10498972-10498991 None:intergenic 15.0%
!! AAATAATGAAAAGAGATAAA+TGG - chr1_2:10499043-10499062 None:intergenic 15.0%
!! AGAATTAAATATACAAACAA+TGG + chr1_2:10499601-10499620 Msa0055470:intron 15.0%
!! TTAAAAATATCAAATGACAT+CGG + chr1_2:10499741-10499760 Msa0055470:intron 15.0%
!! ATAATAATCATTGAAAAATG+AGG + chr1_2:10499999-10500018 Msa0055470:intron 15.0%
!! CTTATGAAAATGAAATTAAA+TGG - chr1_2:10500203-10500222 None:intergenic 15.0%
!!! ATCTTTGATTAGTTAATTTT+GGG - chr1_2:10500247-10500266 None:intergenic 15.0%
!!! AATCTTTGATTAGTTAATTT+TGG - chr1_2:10500248-10500267 None:intergenic 15.0%
!! TTGGAAAAGAAAATAAAAAT+AGG + chr1_2:10500491-10500510 Msa0055470:intron 15.0%
!! AAAATAAAAATAGGTGAAAT+GGG + chr1_2:10500500-10500519 Msa0055470:intron 15.0%
!! CTATAGATATTTATAAAACA+AGG - chr1_2:10501110-10501129 None:intergenic 15.0%
!! AGTCAAAATACTATAAATTA+TGG - chr1_2:10501185-10501204 None:intergenic 15.0%
!!! TTTTTTTGGTATTGATTTAT+AGG + chr1_2:10501686-10501705 Msa0055470:intron 15.0%
!! ATAGGTAAAACTTATAATAT+AGG + chr1_2:10501704-10501723 Msa0055470:intron 15.0%
!! TTTAGCTATAATTATTAGAA+TGG + chr1_2:10501817-10501836 Msa0055470:intron 15.0%
!! AAAAGTAAATACATGTTATT+TGG - chr1_2:10501852-10501871 None:intergenic 15.0%
!!! TTTTGTATGCTTTAATGATT+TGG + chr1_2:10489049-10489068 Msa0055470:intron 20.0%
!! TTTGTATGCTTTAATGATTT+GGG + chr1_2:10489050-10489069 Msa0055470:intron 20.0%
!!! TTTTAGATTATGCAAGTAAA+AGG + chr1_2:10489160-10489179 Msa0055470:intron 20.0%
!! TTGAATGAAATTGTTACATT+TGG + chr1_2:10489213-10489232 Msa0055470:intron 20.0%
!!! ATAATCAATTTTTATTGGAC+AGG + chr1_2:10489966-10489985 Msa0055470:intron 20.0%
!!! ACAATAAATTTTTATTGGAC+AGG + chr1_2:10490040-10490059 Msa0055470:intron 20.0%
!! AATTGAAATTTCTTATTCCT+GGG - chr1_2:10490468-10490487 None:intergenic 20.0%
!! AAATTGAAATTTCTTATTCC+TGG - chr1_2:10490469-10490488 None:intergenic 20.0%
!! AGGAATAAGAAATTTCAATT+TGG + chr1_2:10490468-10490487 Msa0055470:intron 20.0%
!! GGAATAAGAAATTTCAATTT+GGG + chr1_2:10490469-10490488 Msa0055470:intron 20.0%
!! ATTAATTTAACTATTGCTGT+TGG + chr1_2:10492270-10492289 Msa0055470:intron 20.0%
!! TTGAAGAATGGTATTTATAT+TGG - chr1_2:10492331-10492350 None:intergenic 20.0%
!! ATATTAAGTTCTCTGTTATT+AGG + chr1_2:10492581-10492600 Msa0055470:intron 20.0%
!!! CTGTTATTAGGTTTTTATAT+TGG + chr1_2:10492593-10492612 Msa0055470:intron 20.0%
!! ATCTAAGTTCTACATTTATA+AGG - chr1_2:10492662-10492681 None:intergenic 20.0%
!!! TTCTGATACCATTTTATATT+GGG + chr1_2:10492762-10492781 Msa0055470:intron 20.0%
!! TGAAAAGAATATAAAAAGAG+GGG - chr1_2:10492833-10492852 None:intergenic 20.0%
!! CTGAAAAGAATATAAAAAGA+GGG - chr1_2:10492834-10492853 None:intergenic 20.0%
!!! AACATTTTCCTTTACATAAT+AGG + chr1_2:10492950-10492969 Msa0055470:intron 20.0%
!!! ACATTTTCCTTTACATAATA+GGG + chr1_2:10492951-10492970 Msa0055470:intron 20.0%
!!! CTCTTAAGGATTTTTTAAAA+AGG - chr1_2:10493351-10493370 None:intergenic 20.0%
!!! ATAAAACATTTTGACTCTTA+AGG - chr1_2:10493365-10493384 None:intergenic 20.0%
!! AAATAATGTAAAGTCTGAAA+TGG + chr1_2:10493737-10493756 Msa0055470:intron 20.0%
!!! AATAATGTAAAGTCTGAAAT+GGG + chr1_2:10493738-10493757 Msa0055470:intron 20.0%
!!! CATTTGCATATAAATTTTTC+CGG + chr1_2:10494323-10494342 Msa0055470:intron 20.0%
!! GTAATAAACTGCATAAATAA+TGG + chr1_2:10495369-10495388 Msa0055470:intron 20.0%
!! TAAACAATAATTATTGAAGG+GGG + chr1_2:10495433-10495452 Msa0055470:intron 20.0%
!!! AGCTACTTTTTTCAATTATT+AGG - chr1_2:10495569-10495588 None:intergenic 20.0%
!!! TGTAATATTTTGATAAGGAA+AGG + chr1_2:10495925-10495944 Msa0055470:intron 20.0%
!! TAAAAAAACGAAAACATCTA+AGG + chr1_2:10496044-10496063 Msa0055470:intron 20.0%
!! TGCTATATGGTAATATTATT+CGG - chr1_2:10496140-10496159 None:intergenic 20.0%
!!! ATTTGTTGACTTTCATAAAA+AGG + chr1_2:10496264-10496283 Msa0055470:intron 20.0%
!! AATAAATGATACAAAAGTTC+TGG - chr1_2:10496564-10496583 None:intergenic 20.0%
!!! CATTCATTTAGGTTTATTTA+AGG + chr1_2:10497066-10497085 Msa0055470:intron 20.0%
!!! ATTTAGGTTTATTTAAGGTT+TGG + chr1_2:10497071-10497090 Msa0055470:intron 20.0%
!!! TTTAGGTTTATTTAAGGTTT+GGG + chr1_2:10497072-10497091 Msa0055470:intron 20.0%
!! TGATTGTTGAATTTCATTTA+AGG + chr1_2:10497775-10497794 Msa0055470:intron 20.0%
!!! ACAGGTTTTTTTTTTAAAAC+AGG - chr1_2:10498085-10498104 None:intergenic 20.0%
!! TAATAATCATCATCATCTTA+AGG + chr1_2:10498252-10498271 Msa0055470:intron 20.0%
!!! TGATTAAGTATCTTAACTTT+TGG - chr1_2:10498315-10498334 None:intergenic 20.0%
!!! ATTTTGAATCAATATCATTG+AGG - chr1_2:10498387-10498406 None:intergenic 20.0%
!!! AAGAACTTTTGGAATTATTA+TGG - chr1_2:10498468-10498487 None:intergenic 20.0%
!! TGATATGATATATTATGAGT+CGG - chr1_2:10498553-10498572 None:intergenic 20.0%
!! ATGTTAATTTCTTGATAAGA+TGG - chr1_2:10498734-10498753 None:intergenic 20.0%
!! AAATGGTGAAATAGTTTATA+TGG - chr1_2:10499026-10499045 None:intergenic 20.0%
!! AGATGATATCATGTTTAAAT+TGG - chr1_2:10499570-10499589 None:intergenic 20.0%
!! AATTTAAGAACTGTACTAAT+TGG - chr1_2:10499846-10499865 None:intergenic 20.0%
!!! TTAGTTAATTTTGGGATTAT+GGG - chr1_2:10500239-10500258 None:intergenic 20.0%
!!! ATTAGTTAATTTTGGGATTA+TGG - chr1_2:10500240-10500259 None:intergenic 20.0%
!!! ATTGTTTTATCATCAATTTG+AGG - chr1_2:10500305-10500324 None:intergenic 20.0%
!! ACTTTAATCAAGAATTTGAT+GGG - chr1_2:10500346-10500365 None:intergenic 20.0%
!! AACTTTAATCAAGAATTTGA+TGG - chr1_2:10500347-10500366 None:intergenic 20.0%
!! TTTCCTAAACTAAAATTGAT+TGG + chr1_2:10500438-10500457 Msa0055470:intron 20.0%
!!! TAACCAATCAATTTTAGTTT+AGG - chr1_2:10500444-10500463 None:intergenic 20.0%
!!! TTGATTGGTTAATCTAATTA+TGG + chr1_2:10500453-10500472 Msa0055470:intron 20.0%
!! GAAAATAAAAATAGGTGAAA+TGG + chr1_2:10500499-10500518 Msa0055470:intron 20.0%
!!! TTTATCGTATATTTTAGTTG+AGG - chr1_2:10500668-10500687 None:intergenic 20.0%
!!! AGTATCAGTTATTTTATCAT+TGG - chr1_2:10500807-10500826 None:intergenic 20.0%
!!! TGATACTGAATTTTTTCATA+CGG + chr1_2:10500820-10500839 Msa0055470:intron 20.0%
!!! AATTTATAGTATTTTGACTC+AGG + chr1_2:10501186-10501205 Msa0055470:intron 20.0%
!!! AGTTTTTTTCATATTCTTCT+TGG + chr1_2:10501350-10501369 Msa0055470:intron 20.0%
!!! GTTTTTTTCATATTCTTCTT+GGG + chr1_2:10501351-10501370 Msa0055470:intron 20.0%
!! AGGAAAAGAAAAAAAAAACA+AGG - chr1_2:10501643-10501662 None:intergenic 20.0%
!! AAAAACCAAAAACATAAAAG+GGG - chr1_2:10502148-10502167 None:intergenic 20.0%
!! CAAAAACCAAAAACATAAAA+GGG - chr1_2:10502149-10502168 None:intergenic 20.0%
!! ATTGTTACATAGAAAAAAGA+GGG - chr1_2:10502188-10502207 None:intergenic 20.0%
!! TATTGTTACATAGAAAAAAG+AGG - chr1_2:10502189-10502208 None:intergenic 20.0%
!! ATATTATATTGTCCAATTTG+AGG - chr1_2:10502274-10502293 None:intergenic 20.0%
! TATATAAAACTGAAGAACAC+AGG - chr1_2:10488959-10488978 None:intergenic 25.0%
! TTGTATGCTTTAATGATTTG+GGG + chr1_2:10489051-10489070 Msa0055470:intron 25.0%
! GTTTATTTCATCATTGTTTC+TGG + chr1_2:10489077-10489096 Msa0055470:intron 25.0%
!!! AATGTGTGAAGATATTTTGA+TGG + chr1_2:10489124-10489143 Msa0055470:intron 25.0%
!!! ATGTGTGAAGATATTTTGAT+GGG + chr1_2:10489125-10489144 Msa0055470:intron 25.0%
!!! ATATTTTGATGGGTATGTTA+GGG + chr1_2:10489135-10489154 Msa0055470:intron 25.0%
!! AAATGTTTGTTTCTTGCATT+AGG + chr1_2:10489242-10489261 Msa0055470:intron 25.0%
!! AATGTTTGTTTCTTGCATTA+GGG + chr1_2:10489243-10489262 Msa0055470:intron 25.0%
! AACAAACATTATTTGCTTCT+AGG - chr1_2:10489488-10489507 None:intergenic 25.0%
! GACTAGAAGTAATCTAAATA+CGG - chr1_2:10489709-10489728 None:intergenic 25.0%
! ATAAAACACGGAATCAAATA+AGG + chr1_2:10489770-10489789 Msa0055470:intron 25.0%
! TTGTGATTATGACTATTTAG+TGG + chr1_2:10490106-10490125 Msa0055470:intron 25.0%
! TGATTTAATCAGTAAAAGTG+AGG - chr1_2:10490142-10490161 None:intergenic 25.0%
! CAAAGCTAGGAAAAAAAAAA+AGG + chr1_2:10490228-10490247 Msa0055470:intron 25.0%
! GAAAAAAAAAAAGGAGAAGT+TGG + chr1_2:10490237-10490256 Msa0055470:intron 25.0%
! TTATGCAATTTAACAAAGCA+TGG - chr1_2:10490424-10490443 None:intergenic 25.0%
! TCATCTTATATTTACACAAC+CGG - chr1_2:10490995-10491014 None:intergenic 25.0%
!!! AACTTTATTCTTTAAGGTCA+TGG - chr1_2:10491530-10491549 None:intergenic 25.0%
! AGAGAAATAGAAAATTGAAC+AGG - chr1_2:10491661-10491680 None:intergenic 25.0%
!! TGTGTTATTCTTTATAGCAA+TGG + chr1_2:10491686-10491705 Msa0055470:intron 25.0%
!!! CTTGATTTTTTGTTGTACAT+AGG + chr1_2:10492403-10492422 Msa0055470:intron 25.0%
!!! ATTTTTTGTTGTACATAGGA+AGG + chr1_2:10492407-10492426 Msa0055470:intron 25.0%
!!! TTTTTTGTTGTACATAGGAA+GGG + chr1_2:10492408-10492427 Msa0055470:intron 25.0%
!! GTTCTGATACCATTTTATAT+TGG + chr1_2:10492761-10492780 Msa0055470:intron 25.0%
! GATTTAGACCCAATATAAAA+TGG - chr1_2:10492773-10492792 None:intergenic 25.0%
! CTAAATCATCCTTACAAAAT+TGG + chr1_2:10492786-10492805 Msa0055470:intron 25.0%
! CCTGAAAAGAATATAAAAAG+AGG - chr1_2:10492835-10492854 None:intergenic 25.0%
!! CCTCTTTTTATATTCTTTTC+AGG + chr1_2:10492832-10492851 Msa0055470:intron 25.0%
! ATCAGCAAGATAATAAAGTA+GGG + chr1_2:10493529-10493548 Msa0055470:CDS 25.0%
! GTTTATCTTAAGGAATCATT+GGG + chr1_2:10493681-10493700 Msa0055470:intron 25.0%
! TTCCATCTGATTTCAATTAA+TGG + chr1_2:10494059-10494078 Msa0055470:intron 25.0%
! TTCCATTAATTGAAATCAGA+TGG - chr1_2:10494064-10494083 None:intergenic 25.0%
! ATCTGATTTCAATTAATGGA+AGG + chr1_2:10494063-10494082 Msa0055470:intron 25.0%
! ATTAGAAGTTTCTTTCTGAA+TGG + chr1_2:10494371-10494390 Msa0055470:intron 25.0%
! TGAAACAAAAGATGAAAATG+AGG + chr1_2:10494618-10494637 Msa0055470:intron 25.0%
!! GATAAGTATTTAAGCACTTT+TGG + chr1_2:10494669-10494688 Msa0055470:intron 25.0%
! ACTTAAAAGCTAGTTATCAA+GGG + chr1_2:10494699-10494718 Msa0055470:intron 25.0%
! AGAGTTAGATACTTATCAAT+TGG - chr1_2:10494904-10494923 None:intergenic 25.0%
! TATATGGTAATATTATTCGG+GGG - chr1_2:10496137-10496156 None:intergenic 25.0%
! CTATATGGTAATATTATTCG+GGG - chr1_2:10496138-10496157 None:intergenic 25.0%
! GCTATATGGTAATATTATTC+GGG - chr1_2:10496139-10496158 None:intergenic 25.0%
! AAAATTGTGTCTATGCTATA+TGG - chr1_2:10496153-10496172 None:intergenic 25.0%
! AGAATATTGTTCATGTAGAA+CGG - chr1_2:10496183-10496202 None:intergenic 25.0%
! TACATGAACAATATTCTTAG+TGG + chr1_2:10496186-10496205 Msa0055470:intron 25.0%
!!! CACATTTTCTGAAGTAAATT+CGG + chr1_2:10496342-10496361 Msa0055470:CDS 25.0%
! CTGTAGATAATAGAAGTTTA+TGG + chr1_2:10496948-10496967 Msa0055470:intron 25.0%
!! AGATATTGGAGTATTAACAA+TGG + chr1_2:10497371-10497390 Msa0055470:CDS 25.0%
!!! TTAGTCTTTTTGTTGGATTT+AGG + chr1_2:10497661-10497680 Msa0055470:intron 25.0%
! AGTTGTCAAGTTTGATTAAT+AGG - chr1_2:10497957-10497976 None:intergenic 25.0%
! TTAAAACAGGATTTACATCT+TGG - chr1_2:10498072-10498091 None:intergenic 25.0%
! GATGATTATTAAGTGAATGA+TGG - chr1_2:10498243-10498262 None:intergenic 25.0%
!! TATAAGTTGAGTTATAACCA+AGG - chr1_2:10498288-10498307 None:intergenic 25.0%
! AATATCATTGAGGTTGAAAT+AGG - chr1_2:10498377-10498396 None:intergenic 25.0%
! AAGGGATGATAATCAAAATT+AGG - chr1_2:10498586-10498605 None:intergenic 25.0%
! AGATTTGATGTGATCAAATA+GGG - chr1_2:10498661-10498680 None:intergenic 25.0%
!! TTGATAGTAAATTCACATCA+TGG - chr1_2:10498919-10498938 None:intergenic 25.0%
! AGATTTCATATTCGTTACTA+TGG + chr1_2:10499332-10499351 Msa0055470:intron 25.0%
!! TATCATGTTTAAATTGGTCT+AGG - chr1_2:10499564-10499583 None:intergenic 25.0%
! GTGTATGTATTTCCTTAATT+GGG - chr1_2:10499667-10499686 None:intergenic 25.0%
! AGTGTATGTATTTCCTTAAT+TGG - chr1_2:10499668-10499687 None:intergenic 25.0%
!!! TAGTTAATTTTGGGATTATG+GGG - chr1_2:10500238-10500257 None:intergenic 25.0%
! AGATTTATGCATGATAAATG+AGG + chr1_2:10500263-10500282 Msa0055470:intron 25.0%
!!! TTTTATCATCAATTTGAGGT+GGG - chr1_2:10500301-10500320 None:intergenic 25.0%
!!! TCAATTTTAGTTTAGGAAAG+AGG - chr1_2:10500437-10500456 None:intergenic 25.0%
! TCAGTTGGAATAATATGATT+CGG + chr1_2:10500729-10500748 Msa0055470:intron 25.0%
! AATTTAAGAGAAGGACAAAA+TGG - chr1_2:10500782-10500801 None:intergenic 25.0%
! TCATTGGAAAATTTAAGAGA+AGG - chr1_2:10500791-10500810 None:intergenic 25.0%
!!! GATACTGAATTTTTTCATAC+GGG + chr1_2:10500821-10500840 Msa0055470:intron 25.0%
!!! ATACTGAATTTTTTCATACG+GGG + chr1_2:10500822-10500841 Msa0055470:intron 25.0%
! CAATGTTTGCAAATAATGAA+GGG - chr1_2:10500912-10500931 None:intergenic 25.0%
! TCAATGTTTGCAAATAATGA+AGG - chr1_2:10500913-10500932 None:intergenic 25.0%
!! AATCATTTGAAATGTCATTG+AGG - chr1_2:10500946-10500965 None:intergenic 25.0%
! TAATAAGAATCAAACACTTC+TGG + chr1_2:10501238-10501257 Msa0055470:intron 25.0%
!!! AACATGCTGATTTTACTATT+CGG + chr1_2:10501374-10501393 Msa0055470:intron 25.0%
!!! GTTTGGATTCACAATTTTTT+TGG + chr1_2:10501672-10501691 Msa0055470:intron 25.0%
! GAACACAATTTATACAGAAA+AGG - chr1_2:10501750-10501769 None:intergenic 25.0%
! AACATTGTATTGTACAACAA+TGG - chr1_2:10502081-10502100 None:intergenic 25.0%
! GCAAAAACCAAAAACATAAA+AGG - chr1_2:10502150-10502169 None:intergenic 25.0%
!!! ATGTTTTTGTATCCTCAAAT+TGG + chr1_2:10502259-10502278 Msa0055470:three_prime_UTR 25.0%
AGAAAAGAAAGAGGAATTTG+AGG - chr1_2:10488775-10488794 None:intergenic 30.0%
AAGTAACAGTTACAAAAGAG+AGG - chr1_2:10488820-10488839 None:intergenic 30.0%
!!! AGGTTGATGAGTTTTTCTAA+TGG - chr1_2:10488850-10488869 None:intergenic 30.0%
AAGAAAGAGAGGAAATTGAA+GGG - chr1_2:10488890-10488909 None:intergenic 30.0%
AAAGAAAGAGAGGAAATTGA+AGG - chr1_2:10488891-10488910 None:intergenic 30.0%
!!! GATATTTTGATGGGTATGTT+AGG + chr1_2:10489134-10489153 Msa0055470:intron 30.0%
TGATGTAAAGATCTAAGCTT+TGG + chr1_2:10489296-10489315 Msa0055470:intron 30.0%
!! TGTTTTTGTAATGGTGATGT+TGG + chr1_2:10489540-10489559 Msa0055470:intron 30.0%
GAAAGTTAAGATGCACAATT+TGG - chr1_2:10489881-10489900 None:intergenic 30.0%
GTTGTCATGTAAAACTACAA+TGG + chr1_2:10490188-10490207 Msa0055470:intron 30.0%
TTTAACAAAGCATGGAAAGT+AGG - chr1_2:10490416-10490435 None:intergenic 30.0%
TAATTAACTGAGTCTGCAAA+AGG - chr1_2:10490576-10490595 None:intergenic 30.0%
TTTGCAGACTCAGTTAATTA+AGG + chr1_2:10490576-10490595 Msa0055470:intron 30.0%
TATAGCAACAAAGATGTATG+AGG + chr1_2:10490903-10490922 Msa0055470:CDS 30.0%
! TTCAGTATTGAAGCATGATT+TGG - chr1_2:10491101-10491120 None:intergenic 30.0%
TCTAAAGAAAATTACCCTGA+CGG - chr1_2:10491146-10491165 None:intergenic 30.0%
!!! GGGTAATTTTCTTTAGAACT+TGG + chr1_2:10491149-10491168 Msa0055470:intron 30.0%
! GTTCGGCAATTATTTGAAAT+TGG + chr1_2:10491494-10491513 Msa0055470:intron 30.0%
!! TTATTCTTTAAGGTCATGGA+AGG - chr1_2:10491526-10491545 None:intergenic 30.0%
AATTATCATAGTGATGCTTC+GGG - chr1_2:10491603-10491622 None:intergenic 30.0%
CAATTATCATAGTGATGCTT+CGG - chr1_2:10491604-10491623 None:intergenic 30.0%
TTGCCTGAAATCAAGAAATT+CGG - chr1_2:10491730-10491749 None:intergenic 30.0%
!! CACTTTTTATGATAGTGTAC+CGG - chr1_2:10491825-10491844 None:intergenic 30.0%
TTACTATATGTCCTATTTGC+TGG + chr1_2:10491857-10491876 Msa0055470:intron 30.0%
! TTTTATATCCTGATTCCAAG+TGG - chr1_2:10491896-10491915 None:intergenic 30.0%
TAACTCAATGAAAGATTACC+AGG - chr1_2:10491982-10492001 None:intergenic 30.0%
! TGTGTTATTACTGCAAAAAC+TGG + chr1_2:10492022-10492041 Msa0055470:intron 30.0%
TTATTCATTACCTTATTGCG+TGG + chr1_2:10492081-10492100 Msa0055470:intron 30.0%
TATTCATTACCTTATTGCGT+GGG + chr1_2:10492082-10492101 Msa0055470:intron 30.0%
!!! TATTTTGGGATATAATGCGA+AGG + chr1_2:10492107-10492126 Msa0055470:intron 30.0%
TGGCAATAATGATCAAGTTT+AGG - chr1_2:10492311-10492330 None:intergenic 30.0%
GGTATCAGAACTTATTCATT+CGG - chr1_2:10492752-10492771 None:intergenic 30.0%
TTCCTTTACATAATAGGGTT+TGG + chr1_2:10492956-10492975 Msa0055470:intron 30.0%
ATCCAAACCCTATTATGTAA+AGG - chr1_2:10492961-10492980 None:intergenic 30.0%
!! AACATTGGAAGTTGATGAAA+AGG - chr1_2:10493038-10493057 None:intergenic 30.0%
CTACTGAATACTCGAAATAT+GGG + chr1_2:10493146-10493165 Msa0055470:CDS 30.0%
CATCAGCAAGATAATAAAGT+AGG + chr1_2:10493528-10493547 Msa0055470:CDS 30.0%
TCAGCAAGATAATAAAGTAG+GGG + chr1_2:10493530-10493549 Msa0055470:CDS 30.0%
GGAATAGAAGTCACAATAAA+AGG - chr1_2:10493624-10493643 None:intergenic 30.0%
CGTTTATCTTAAGGAATCAT+TGG + chr1_2:10493680-10493699 Msa0055470:intron 30.0%
!! TTTTGTTCTGAATGAACTCA+AGG + chr1_2:10493774-10493793 Msa0055470:intron 30.0%
TTAGAAGAACTACCATTATG+AGG - chr1_2:10493967-10493986 None:intergenic 30.0%
TCAGTGCTAAACATCATTAA+TGG - chr1_2:10493991-10494010 None:intergenic 30.0%
! TTAATGATGTTTAGCACTGA+TGG + chr1_2:10493991-10494010 Msa0055470:CDS 30.0%
TGATAAGGATATTGAATTGC+AGG + chr1_2:10494139-10494158 Msa0055470:CDS 30.0%
TCAGAAAGAAACTTCTAATG+AGG - chr1_2:10494370-10494389 None:intergenic 30.0%
AAGACCATTCATGTTCTTAT+TGG + chr1_2:10494491-10494510 Msa0055470:intron 30.0%
TGTTTCACTCGTCTTTAATA+GGG - chr1_2:10494605-10494624 None:intergenic 30.0%
TTGTTTCACTCGTCTTTAAT+AGG - chr1_2:10494606-10494625 None:intergenic 30.0%
!!! GATAACTAGCTTTTAAGTGA+GGG - chr1_2:10494697-10494716 None:intergenic 30.0%
!!! TGATAACTAGCTTTTAAGTG+AGG - chr1_2:10494698-10494717 None:intergenic 30.0%
CACTTAAAAGCTAGTTATCA+AGG + chr1_2:10494698-10494717 Msa0055470:intron 30.0%
CTTAAAAGCTAGTTATCAAG+GGG + chr1_2:10494700-10494719 Msa0055470:intron 30.0%
TTAAAAGCTAGTTATCAAGG+GGG + chr1_2:10494701-10494720 Msa0055470:intron 30.0%
!! CAACGCTTTATTCATCTTTT+CGG + chr1_2:10494824-10494843 Msa0055470:intron 30.0%
!! AACGCTTTATTCATCTTTTC+GGG + chr1_2:10494825-10494844 Msa0055470:intron 30.0%
TTATCAATTGGTATCAGATC+TGG - chr1_2:10494892-10494911 None:intergenic 30.0%
TACTCGGGGTTATTTAATAT+TGG + chr1_2:10495219-10495238 Msa0055470:intron 30.0%
ACTCGGGGTTATTTAATATT+GGG + chr1_2:10495220-10495239 Msa0055470:intron 30.0%
GGGTTATTTAATATTGGGAT+TGG + chr1_2:10495225-10495244 Msa0055470:intron 30.0%
TTATAGTTTAGTTATGGGCT+TGG + chr1_2:10495328-10495347 Msa0055470:intron 30.0%
! ATGTTCGGTGGAATATTTAA+GGG - chr1_2:10495470-10495489 None:intergenic 30.0%
ATATGGTAATATTATTCGGG+GGG - chr1_2:10496136-10496155 None:intergenic 30.0%
TTAGTGGTATCAGTTAGAAA+GGG + chr1_2:10496202-10496221 Msa0055470:intron 30.0%
!! CATGAGTTTGCTTTATTTCT+AGG + chr1_2:10496316-10496335 Msa0055470:intron 30.0%
! AGCATTAAAACATGCTTTTC+CGG - chr1_2:10496465-10496484 None:intergenic 30.0%
!! TTGTTTTGCAATTTTCAAGC+AGG - chr1_2:10496538-10496557 None:intergenic 30.0%
TCGAATCTTGTACAGATAAA+TGG + chr1_2:10496803-10496822 Msa0055470:intron 30.0%
ATTGCTAGGTTCATTCATTT+AGG + chr1_2:10497055-10497074 Msa0055470:intron 30.0%
AACGTTCTTTATATTGTCAC+AGG + chr1_2:10497095-10497114 Msa0055470:intron 30.0%
CAGATAAGGTCATCTTTATT+AGG - chr1_2:10497326-10497345 None:intergenic 30.0%
!!! TTTTTTTTCACCAATTAGGG+TGG + chr1_2:10497507-10497526 Msa0055470:intron 30.0%
! AACCAACCTTTAGAGAATAT+CGG - chr1_2:10497629-10497648 None:intergenic 30.0%
!! AGGAATCTTAGTCTTTTTGT+TGG + chr1_2:10497654-10497673 Msa0055470:intron 30.0%
GCTTATTACAAGATGTTTGA+AGG + chr1_2:10497846-10497865 Msa0055470:intron 30.0%
TATTACAAGATGTTTGAAGG+TGG + chr1_2:10497849-10497868 Msa0055470:intron 30.0%
ATTACAAGATGTTTGAAGGT+GGG + chr1_2:10497850-10497869 Msa0055470:intron 30.0%
TGGAAATGTTGAAAATACAG+AGG - chr1_2:10498052-10498071 None:intergenic 30.0%
! AAGATGTTATTTGGAGATTC+TGG - chr1_2:10498116-10498135 None:intergenic 30.0%
! TTGATGTATCTGAAGCTATT+TGG - chr1_2:10498186-10498205 None:intergenic 30.0%
AACACTAAGACAATCATTCA+AGG + chr1_2:10498511-10498530 Msa0055470:intron 30.0%
GAGATTTGATGTGATCAAAT+AGG - chr1_2:10498662-10498681 None:intergenic 30.0%
TATTCCTCATTTCCAACTAT+TGG + chr1_2:10498767-10498786 Msa0055470:intron 30.0%
TTTACCAATAGTTGGAAATG+AGG - chr1_2:10498774-10498793 None:intergenic 30.0%
GCTACGAAGAAATATTTCAT+GGG - chr1_2:10498800-10498819 None:intergenic 30.0%
AGCTACGAAGAAATATTTCA+TGG - chr1_2:10498801-10498820 None:intergenic 30.0%
GTGAAATAGTTTATATGGAG+TGG - chr1_2:10499021-10499040 None:intergenic 30.0%
ACGGTATACTATGAACAATT+TGG + chr1_2:10499205-10499224 Msa0055470:intron 30.0%
! CTATGAACAATTTGGTTCAT+AGG + chr1_2:10499213-10499232 Msa0055470:intron 30.0%
! ATACTAAGCTTTCTAAAGAG+TGG - chr1_2:10499781-10499800 None:intergenic 30.0%
AGTTCTTAAATTGAAGACAC+AGG + chr1_2:10499854-10499873 Msa0055470:intron 30.0%
GTTCTTAAATTGAAGACACA+GGG + chr1_2:10499855-10499874 Msa0055470:intron 30.0%
TTCTTAAATTGAAGACACAG+GGG + chr1_2:10499856-10499875 Msa0055470:intron 30.0%
TCATTGAAAAATGAGGTCTA+AGG + chr1_2:10500006-10500025 Msa0055470:intron 30.0%
! AATGGGCATACGAATTTTAA+GGG + chr1_2:10500055-10500074 Msa0055470:intron 30.0%
TGGAATTAGTGTATGTTGTT+AGG - chr1_2:10500107-10500126 None:intergenic 30.0%
! GTTTTATCATCAATTTGAGG+TGG - chr1_2:10500302-10500321 None:intergenic 30.0%
AAAACAATGCCACTCTTAAT+TGG + chr1_2:10500317-10500336 Msa0055470:intron 30.0%
TTGAATAGAAGAGAAGCAAA+TGG - chr1_2:10500412-10500431 None:intergenic 30.0%
!!! AATGCCGTAAAAGTTTTAAG+CGG + chr1_2:10500687-10500706 Msa0055470:intron 30.0%
!! TTTGCCGCTTAAAACTTTTA+CGG - chr1_2:10500694-10500713 None:intergenic 30.0%
GATTTGTAAAATATGCAGAG+TGG + chr1_2:10501028-10501047 Msa0055470:intron 30.0%
TAGAAGAGATCAAATTACAC+CGG - chr1_2:10501077-10501096 None:intergenic 30.0%
AAACATGTATAGTTCCATGT+AGG + chr1_2:10501141-10501160 Msa0055470:intron 30.0%
AATATGTTCCTATGAATTGC+AGG + chr1_2:10501397-10501416 Msa0055470:intron 30.0%
ATATGTTCCTATGAATTGCA+GGG + chr1_2:10501398-10501417 Msa0055470:intron 30.0%
AGTCAATACATTCTGTTTGT+TGG + chr1_2:10501429-10501448 Msa0055470:CDS 30.0%
GTCAATACATTCTGTTTGTT+GGG + chr1_2:10501430-10501449 Msa0055470:CDS 30.0%
!! CTTTTCCTTTTGAGTATGTT+TGG + chr1_2:10501655-10501674 Msa0055470:intron 30.0%
TGAATCCAAACATACTCAAA+AGG - chr1_2:10501663-10501682 None:intergenic 30.0%
AAAGGATTTCAAGATTGAAG+TGG - chr1_2:10501732-10501751 None:intergenic 30.0%
GTTCAGAAATCTACTCTATT+TGG + chr1_2:10501766-10501785 Msa0055470:intron 30.0%
AGAAATCTACTCTATTTGGT+TGG + chr1_2:10501770-10501789 Msa0055470:intron 30.0%
! GAATGGTGATAATGTTACAA+AGG - chr1_2:10502220-10502239 None:intergenic 30.0%
! ATCACCATTCTTGTTTACTT+TGG + chr1_2:10502230-10502249 Msa0055470:three_prime_UTR 30.0%
ATCTCCAAAGTAAACAAGAA+TGG - chr1_2:10502237-10502256 None:intergenic 30.0%
! ATGCTTCAATTTGAGATAAG+CGG - chr1_2:10502314-10502333 None:intergenic 30.0%
!! GGGTATTGAAGAAATGAAAG+AGG - chr1_2:10488870-10488889 None:intergenic 35.0%
! ATGCTTTAATGATTTGGGGT+TGG + chr1_2:10489055-10489074 Msa0055470:intron 35.0%
TGCTTGTGTTGTGATATTTC+AGG + chr1_2:10489354-10489373 Msa0055470:intron 35.0%
! TGTGTTGTGATATTTCAGGT+TGG + chr1_2:10489358-10489377 Msa0055470:intron 35.0%
TCTAAATACGGAAAAGAACG+TGG - chr1_2:10489697-10489716 None:intergenic 35.0%
GAAGTTCAGCGAATAAAACA+CGG + chr1_2:10489758-10489777 Msa0055470:intron 35.0%
ACGGAATCAAATAAGGAAGT+TGG + chr1_2:10489777-10489796 Msa0055470:intron 35.0%
ACGAATAGATACAGCGAAAA+AGG - chr1_2:10489806-10489825 None:intergenic 35.0%
TATGCGTTGTTTAGCTGTTA+GGG + chr1_2:10489923-10489942 Msa0055470:intron 35.0%
CATGTAAAACTACAATGGCA+TGG + chr1_2:10490193-10490212 Msa0055470:intron 35.0%
GTAACTTTGAATGCAAAGCT+AGG + chr1_2:10490215-10490234 Msa0055470:intron 35.0%
TATTCCTGGGCAAAAACAAA+AGG - chr1_2:10490455-10490474 None:intergenic 35.0%
CAACAAAGATGTATGAGGAA+AGG + chr1_2:10490908-10490927 Msa0055470:CDS 35.0%
GTTAAAACTTCCCCTTCAAA+GGG + chr1_2:10490930-10490949 Msa0055470:CDS 35.0%
TTCCAAAGAATCCCTTTGAA+GGG - chr1_2:10490944-10490963 None:intergenic 35.0%
TATTCCGTACAGCAAAGATT+TGG + chr1_2:10491059-10491078 Msa0055470:intron 35.0%
! CTATACTACCTTCTGTTTTG+GGG - chr1_2:10491222-10491241 None:intergenic 35.0%
! GCTATACTACCTTCTGTTTT+GGG - chr1_2:10491223-10491242 None:intergenic 35.0%
AACTATCTGACTGTTATAGC+GGG - chr1_2:10491445-10491464 None:intergenic 35.0%
GAACTATCTGACTGTTATAG+CGG - chr1_2:10491446-10491465 None:intergenic 35.0%
AACAGTCAGATAGTTCTCTT+TGG + chr1_2:10491450-10491469 Msa0055470:intron 35.0%
ATTATCATAGTGATGCTTCG+GGG - chr1_2:10491602-10491621 None:intergenic 35.0%
ACACCGAATTTCTTGATTTC+AGG + chr1_2:10491724-10491743 Msa0055470:intron 35.0%
AATTGCCATCAATGATCCTT+CGG - chr1_2:10491959-10491978 None:intergenic 35.0%
ATTCATTACCTTATTGCGTG+GGG + chr1_2:10492083-10492102 Msa0055470:intron 35.0%
! TTATTGCGTGGGGATATTTT+GGG + chr1_2:10492093-10492112 Msa0055470:intron 35.0%
TGCTCACAGATTAAGTTAAC+AGG + chr1_2:10492155-10492174 Msa0055470:intron 35.0%
!! AGGATACTTTTGTTTGTTCC+AGG + chr1_2:10492175-10492194 Msa0055470:intron 35.0%
TTTGTTCCAGGATCAAATCA+AGG + chr1_2:10492187-10492206 Msa0055470:intron 35.0%
! GCAACAATTTGACTCTGAAA+GGG + chr1_2:10492212-10492231 Msa0055470:CDS 35.0%
! CACACAATCACTTTGAAGAA+TGG - chr1_2:10492343-10492362 None:intergenic 35.0%
! ATCCACTTGATAATAGCCAA+GGG - chr1_2:10492465-10492484 None:intergenic 35.0%
TAACAGATACAAGCATAGGA+GGG - chr1_2:10492495-10492514 None:intergenic 35.0%
TTAACAGATACAAGCATAGG+AGG - chr1_2:10492496-10492515 None:intergenic 35.0%
AGGTTAACAGATACAAGCAT+AGG - chr1_2:10492499-10492518 None:intergenic 35.0%
TGCTAGACTCTTCAGATAAT+AGG - chr1_2:10492555-10492574 None:intergenic 35.0%
AAGTGTAGTAACGATGAGTT+AGG - chr1_2:10492620-10492639 None:intergenic 35.0%
GTTACTACACTTGTAAGTGA+GGG + chr1_2:10492628-10492647 Msa0055470:intron 35.0%
TTACTACACTTGTAAGTGAG+GGG + chr1_2:10492629-10492648 Msa0055470:intron 35.0%
!! AACTTGGTGCATCGATAATT+TGG + chr1_2:10492718-10492737 Msa0055470:intron 35.0%
! CCTTACAAGCCAATTTTGTA+AGG - chr1_2:10492798-10492817 None:intergenic 35.0%
!! CCTTACAAAATTGGCTTGTA+AGG + chr1_2:10492795-10492814 Msa0055470:intron 35.0%
!! AAAATTGGCTTGTAAGGTGA+GGG + chr1_2:10492801-10492820 Msa0055470:intron 35.0%
!! GCCTTATTTACTCTCAATGT+GGG + chr1_2:10492854-10492873 Msa0055470:intron 35.0%
TCCCACATTGAGAGTAAATA+AGG - chr1_2:10492858-10492877 None:intergenic 35.0%
! GTATGAAAGGTTTTTGTTGC+TGG - chr1_2:10493004-10493023 None:intergenic 35.0%
TGATGTTGTTGTGTCAACAT+TGG - chr1_2:10493053-10493072 None:intergenic 35.0%
GCTACTGAATACTCGAAATA+TGG + chr1_2:10493145-10493164 Msa0055470:CDS 35.0%
TTTGATACAACATCACCAAC+AGG - chr1_2:10493197-10493216 None:intergenic 35.0%
GGTGATGTTGTATCAAATGT+TGG + chr1_2:10493200-10493219 Msa0055470:CDS 35.0%
GGATACAGATATGCTAATGA+AGG + chr1_2:10493262-10493281 Msa0055470:CDS 35.0%
CAGCAAGATAATAAAGTAGG+GGG + chr1_2:10493531-10493550 Msa0055470:CDS 35.0%
TTGAGCCATGTATGATTTCT+CGG + chr1_2:10493654-10493673 Msa0055470:intron 35.0%
TCTCGGTTTCGTTTATCTTA+AGG + chr1_2:10493671-10493690 Msa0055470:intron 35.0%
ATGCCTTCTTTACCTCATAA+TGG + chr1_2:10493952-10493971 Msa0055470:CDS 35.0%
CTACCATTATGAGGTAAAGA+AGG - chr1_2:10493958-10493977 None:intergenic 35.0%
GATTGTGATGTGTTGAATGT+AGG + chr1_2:10494396-10494415 Msa0055470:intron 35.0%
AGGACCAATAAGAACATGAA+TGG - chr1_2:10494498-10494517 None:intergenic 35.0%
TTACTCATTGTCTACTCATC+TGG - chr1_2:10494564-10494583 None:intergenic 35.0%
TAAAAGCTAGTTATCAAGGG+GGG + chr1_2:10494702-10494721 Msa0055470:intron 35.0%
!! AAGTATCTAACTCTGAAGCA+TGG + chr1_2:10494910-10494929 Msa0055470:intron 35.0%
!! AGTATCTAACTCTGAAGCAT+GGG + chr1_2:10494911-10494930 Msa0055470:intron 35.0%
TACCCATACTGGATACATAT+CGG + chr1_2:10494953-10494972 Msa0055470:intron 35.0%
ATCCGATATGTATCCAGTAT+GGG - chr1_2:10494958-10494977 None:intergenic 35.0%
TATCCGATATGTATCCAGTA+TGG - chr1_2:10494959-10494978 None:intergenic 35.0%
TACTGGATACATATCGGATA+TGG + chr1_2:10494959-10494978 Msa0055470:intron 35.0%
ACTGGATACATATCGGATAT+GGG + chr1_2:10494960-10494979 Msa0055470:intron 35.0%
TCAAGTGCGGGAAAAAAAAA+AGG - chr1_2:10495014-10495033 None:intergenic 35.0%
AAGATGGAGTGATGAAGATT+TGG + chr1_2:10495146-10495165 Msa0055470:intron 35.0%
AACTGTAGGCAAGTAATACT+CGG + chr1_2:10495203-10495222 Msa0055470:intron 35.0%
ACAATAATTATTGAAGGGGG+AGG + chr1_2:10495436-10495455 Msa0055470:intron 35.0%
! GATGTTCGGTGGAATATTTA+AGG - chr1_2:10495471-10495490 None:intergenic 35.0%
ATCGAATAGTATGGGATGTT+CGG - chr1_2:10495485-10495504 None:intergenic 35.0%
AGGAAAACATCACCAAAACA+AGG - chr1_2:10495677-10495696 None:intergenic 35.0%
!!! TTGTTTTGGTGATGTTTTCC+TGG + chr1_2:10495676-10495695 Msa0055470:intron 35.0%
! GCTTGAGCTTACTAAACTTT+TGG - chr1_2:10495790-10495809 None:intergenic 35.0%
ATAAGGAAAGGAATCAGTGT+TGG + chr1_2:10495937-10495956 Msa0055470:intron 35.0%
! AAATGAAGCCTTTTTCCACT+AGG + chr1_2:10495988-10496007 Msa0055470:intron 35.0%
! AATGAAGCCTTTTTCCACTA+GGG + chr1_2:10495989-10496008 Msa0055470:intron 35.0%
TATGGTAATATTATTCGGGG+GGG - chr1_2:10496135-10496154 None:intergenic 35.0%
ATTGTTCATGTAGAACGGTT+GGG - chr1_2:10496178-10496197 None:intergenic 35.0%
TATTGTTCATGTAGAACGGT+TGG - chr1_2:10496179-10496198 None:intergenic 35.0%
CTTAGTGGTATCAGTTAGAA+AGG + chr1_2:10496201-10496220 Msa0055470:intron 35.0%
! AAAAGGTTTGTTCATTGCTC+CGG + chr1_2:10496443-10496462 Msa0055470:intron 35.0%
! TTTCCTTTGTTTCACAATGC+AGG + chr1_2:10496607-10496626 Msa0055470:intron 35.0%
!! TCACAATGCAGGTTGTTTTA+TGG + chr1_2:10496618-10496637 Msa0055470:intron 35.0%
CTTCATATGACAAAACTGTC+CGG + chr1_2:10496738-10496757 Msa0055470:CDS 35.0%
TTCATATGACAAAACTGTCC+GGG + chr1_2:10496739-10496758 Msa0055470:CDS 35.0%
! ATCTACAGCTACTTTCAACA+AGG - chr1_2:10496936-10496955 None:intergenic 35.0%
!! TGCACAAACTTTTGATTGCT+AGG + chr1_2:10497041-10497060 Msa0055470:intron 35.0%
! GTGATGGAGAGATAAGATAT+TGG + chr1_2:10497357-10497376 Msa0055470:CDS 35.0%
TCACTTCATTCACAGTTGTA+TGG + chr1_2:10497435-10497454 Msa0055470:intron 35.0%
! CTCTAAAGGTTGGTTCAAAT+AGG + chr1_2:10497634-10497653 Msa0055470:intron 35.0%
GTTTCTGATGTTAACCAGAT+AGG - chr1_2:10497741-10497760 None:intergenic 35.0%
AGTTTGATTAATAGGCTTGC+CGG - chr1_2:10497949-10497968 None:intergenic 35.0%
CTTAAGGTTACAATCAACCT+TGG + chr1_2:10498268-10498287 Msa0055470:intron 35.0%
CATTGAGGTTGAAATAGGAT+TGG - chr1_2:10498372-10498391 None:intergenic 35.0%
! CTCGATCAAGTAAGAACTTT+TGG - chr1_2:10498479-10498498 None:intergenic 35.0%
TGAGAAGGATTAGAGACTAA+GGG - chr1_2:10498604-10498623 None:intergenic 35.0%
ATGAGAAGGATTAGAGACTA+AGG - chr1_2:10498605-10498624 None:intergenic 35.0%
TTTGATGTGATCAAATAGGG+TGG - chr1_2:10498658-10498677 None:intergenic 35.0%
! ATGGGCATTTTACCAATAGT+TGG - chr1_2:10498782-10498801 None:intergenic 35.0%
!! TCTATGAGCTTGTTACTCAT+AGG + chr1_2:10499280-10499299 Msa0055470:intron 35.0%
ATAATGTAGCCTATGACGTA+CGG - chr1_2:10499359-10499378 None:intergenic 35.0%
ATAATGTAGCCTATGACGTA+CGG - chr1_2:10499359-10499378 None:intergenic 35.0%
TATCTCTTCGTTGTAGCAAA+CGG + chr1_2:10499376-10499395 Msa0055470:intron 35.0%
ATGGTTTAATCATCCAACTC+AGG + chr1_2:10499620-10499639 Msa0055470:intron 35.0%
AGCAACAACTTTCCCAATTA+AGG + chr1_2:10499652-10499671 Msa0055470:intron 35.0%
AGGTTGAGCACAAATTTCAT+TGG - chr1_2:10499950-10499969 None:intergenic 35.0%
!!! AAGTACACACTTTTTCCTTC+AGG - chr1_2:10499970-10499989 None:intergenic 35.0%
AGGTCTAAGGAACACATTAT+GGG + chr1_2:10500019-10500038 Msa0055470:intron 35.0%
ATGGGCAAAACATTAGACAA+TGG + chr1_2:10500037-10500056 Msa0055470:intron 35.0%
TGGGCAAAACATTAGACAAT+GGG + chr1_2:10500038-10500057 Msa0055470:intron 35.0%
! CAATGGGCATACGAATTTTA+AGG + chr1_2:10500054-10500073 Msa0055470:intron 35.0%
ACAACATACACTAATTCCAG+TGG + chr1_2:10500108-10500127 Msa0055470:intron 35.0%
!!! ATTTTGGGATTATGGGGTTT+TGG - chr1_2:10500232-10500251 None:intergenic 35.0%
TGCATGATAAATGAGGAAGA+AGG + chr1_2:10500270-10500289 Msa0055470:intron 35.0%
GCATGATAAATGAGGAAGAA+GGG + chr1_2:10500271-10500290 Msa0055470:intron 35.0%
GTTCAAGTGGAAAAGAAATG+GGG - chr1_2:10500383-10500402 None:intergenic 35.0%
GGTTCAAGTGGAAAAGAAAT+GGG - chr1_2:10500384-10500403 None:intergenic 35.0%
!! GAAGAGAAGCAAATGGATTA+GGG - chr1_2:10500405-10500424 None:intergenic 35.0%
! AGAAGAGAAGCAAATGGATT+AGG - chr1_2:10500406-10500425 None:intergenic 35.0%
!! ATGGCTTTGCATGCTAATTT+TGG + chr1_2:10500472-10500491 Msa0055470:intron 35.0%
AAATAGGTGAAATGGGAGAA+AGG + chr1_2:10500507-10500526 Msa0055470:intron 35.0%
!!! AAAGGGCATTTTGGTCATTT+AGG - chr1_2:10500635-10500654 None:intergenic 35.0%
TTTCATTCTCAATGGTCAGT+TGG + chr1_2:10500714-10500733 Msa0055470:intron 35.0%
GTATAGTTCCATGTAGGTTA+AGG + chr1_2:10501147-10501166 Msa0055470:intron 35.0%
ATGAGTAACCTTAACCTACA+TGG - chr1_2:10501158-10501177 None:intergenic 35.0%
GTAGGTTAAGGTTACTCATT+TGG + chr1_2:10501159-10501178 Msa0055470:intron 35.0%
! GTTGCCTGGATATTTTGTAT+TGG + chr1_2:10501292-10501311 Msa0055470:intron 35.0%
GTGACCAATACAAAATATCC+AGG - chr1_2:10501299-10501318 None:intergenic 35.0%
TATTCTTCACTGTTGGTCAT+TGG + chr1_2:10501593-10501612 Msa0055470:CDS 35.0%
ACTGCAGATCATAGTAGAAA+TGG - chr1_2:10501896-10501915 None:intergenic 35.0%
CAAACCGTTTACAGTTGAAA+CGG - chr1_2:10501994-10502013 None:intergenic 35.0%
ATTGTACAACAATGGTACAC+CGG - chr1_2:10502073-10502092 None:intergenic 35.0%
CCAAAAACATAAAAGGGGAA+TGG - chr1_2:10502143-10502162 None:intergenic 35.0%
! CCATTCCCCTTTTATGTTTT+TGG + chr1_2:10502140-10502159 Msa0055470:three_prime_UTR 35.0%
GTTACATAGAAAAAAGAGGG+TGG - chr1_2:10502185-10502204 None:intergenic 35.0%
! ATTTGAGATAAGCGGGAAAA+AGG - chr1_2:10502306-10502325 None:intergenic 35.0%
! TGCTTCAATTTGAGATAAGC+GGG - chr1_2:10502313-10502332 None:intergenic 35.0%
ACACAGAGGAGAAAAGAAAG+AGG - chr1_2:10488784-10488803 None:intergenic 40.0%
AGACATGCTGAAAGAAAGAG+AGG - chr1_2:10488901-10488920 None:intergenic 40.0%
TCCATGATTACCTTGTGAAG+AGG + chr1_2:10489390-10489409 Msa0055470:CDS 40.0%
CCATGATTACCTTGTGAAGA+GGG + chr1_2:10489391-10489410 Msa0055470:CDS 40.0%
CTTTCAAATCCCTCTTCACA+AGG - chr1_2:10489403-10489422 None:intergenic 40.0%
! AAAGTGTCTTCTGATCCTGT+TGG + chr1_2:10489452-10489471 Msa0055470:CDS 40.0%
CTAGGTTATAACTCACCAAC+AGG - chr1_2:10489470-10489489 None:intergenic 40.0%
! ATTTTTGTTCGAGTGGTGGT+CGG + chr1_2:10489589-10489608 Msa0055470:CDS 40.0%
CTATGCGTTGTTTAGCTGTT+AGG + chr1_2:10489922-10489941 Msa0055470:intron 40.0%
ATGCGTTGTTTAGCTGTTAG+GGG + chr1_2:10489924-10489943 Msa0055470:intron 40.0%
!!! TGTACCTTTTGTTTTTGCCC+AGG + chr1_2:10490448-10490467 Msa0055470:intron 40.0%
AGACTCAGTTAATTAAGGCC+AGG + chr1_2:10490581-10490600 Msa0055470:intron 40.0%
GACTCAGTTAATTAAGGCCA+GGG + chr1_2:10490582-10490601 Msa0055470:intron 40.0%
TGCAACATATGCTGTTACAG+AGG + chr1_2:10490692-10490711 Msa0055470:CDS 40.0%
CTATAGCATTTGCAGTGCTA+GGG - chr1_2:10490888-10490907 None:intergenic 40.0%
GGTTAAAACTTCCCCTTCAA+AGG + chr1_2:10490929-10490948 Msa0055470:CDS 40.0%
! TCCAAAGAATCCCTTTGAAG+GGG - chr1_2:10490943-10490962 None:intergenic 40.0%
CTTCCAAAGAATCCCTTTGA+AGG - chr1_2:10490945-10490964 None:intergenic 40.0%
TTTGGAAGATGCTGCAATGA+AGG + chr1_2:10490957-10490976 Msa0055470:CDS 40.0%
! GTCTCCAAATCTTTGCTGTA+CGG - chr1_2:10491066-10491085 None:intergenic 40.0%
AAGATTTGGAGACCAACTCT+TGG + chr1_2:10491073-10491092 Msa0055470:CDS 40.0%
! CATGATTTGGATCCAAGAGT+TGG - chr1_2:10491088-10491107 None:intergenic 40.0%
GATTTATGCCCCAAAACAGA+AGG + chr1_2:10491211-10491230 Msa0055470:intron 40.0%
! CGCTATACTACCTTCTGTTT+TGG - chr1_2:10491224-10491243 None:intergenic 40.0%
TTCAGTGATCGCGAAAATAG+TGG - chr1_2:10491363-10491382 None:intergenic 40.0%
AGTCAGATAGTTCTCTTTGG+AGG + chr1_2:10491453-10491472 Msa0055470:intron 40.0%
GTCAGATAGTTCTCTTTGGA+GGG + chr1_2:10491454-10491473 Msa0055470:intron 40.0%
! TCAGATAGTTCTCTTTGGAG+GGG + chr1_2:10491455-10491474 Msa0055470:intron 40.0%
! TTGAACAGGCATTGTAGTTG+TGG - chr1_2:10491647-10491666 None:intergenic 40.0%
! GATTTCAGGCAAGTTTTGCA+TGG + chr1_2:10491738-10491757 Msa0055470:intron 40.0%
AGTCAGGAAAACCAGCAAAT+AGG - chr1_2:10491871-10491890 None:intergenic 40.0%
ATTGCCATCAATGATCCTTC+GGG - chr1_2:10491958-10491977 None:intergenic 40.0%
CAAAATATCCCCACGCAATA+AGG - chr1_2:10492094-10492113 None:intergenic 40.0%
! CTTATTGCGTGGGGATATTT+TGG + chr1_2:10492092-10492111 Msa0055470:intron 40.0%
GGCAACAATTTGACTCTGAA+AGG + chr1_2:10492211-10492230 Msa0055470:CDS 40.0%
! ACAATTTGACTCTGAAAGGG+TGG + chr1_2:10492215-10492234 Msa0055470:CDS 40.0%
AAAGGTTTACTCACTGTGAG+TGG - chr1_2:10492241-10492260 None:intergenic 40.0%
TCTTCAAAGTGATTGTGTGC+TGG + chr1_2:10492344-10492363 Msa0055470:intron 40.0%
GTACATAGGAAGGGAATCTA+TGG + chr1_2:10492417-10492436 Msa0055470:intron 40.0%
! ACTTGATAATAGCCAAGGGA+AGG - chr1_2:10492461-10492480 None:intergenic 40.0%
TTCCCTTGGCTATTATCAAG+TGG + chr1_2:10492460-10492479 Msa0055470:intron 40.0%
! CATCCACTTGATAATAGCCA+AGG - chr1_2:10492466-10492485 None:intergenic 40.0%
CCACCATTTCAATCAGACAA+GGG - chr1_2:10492532-10492551 None:intergenic 40.0%
CGTTACTACACTTGTAAGTG+AGG + chr1_2:10492627-10492646 Msa0055470:intron 40.0%
! TTGGTGCATCGATAATTTGG+TGG + chr1_2:10492721-10492740 Msa0055470:intron 40.0%
! TGGTGCATCGATAATTTGGT+GGG + chr1_2:10492722-10492741 Msa0055470:intron 40.0%
!! CAAAATTGGCTTGTAAGGTG+AGG + chr1_2:10492800-10492819 Msa0055470:intron 40.0%
!! AAATTGGCTTGTAAGGTGAG+GGG + chr1_2:10492802-10492821 Msa0055470:intron 40.0%
!! GGCCTTATTTACTCTCAATG+TGG + chr1_2:10492853-10492872 Msa0055470:intron 40.0%
TTTACTCTCAATGTGGGACT+TGG + chr1_2:10492860-10492879 Msa0055470:intron 40.0%
TTACTCTCAATGTGGGACTT+GGG + chr1_2:10492861-10492880 Msa0055470:intron 40.0%
GAGTCTTCTACTATCATCAC+TGG - chr1_2:10493120-10493139 None:intergenic 40.0%
AATACTCGAAATATGGGCGT+AGG + chr1_2:10493152-10493171 Msa0055470:CDS 40.0%
CATCACCAACAGGATTTGAA+AGG - chr1_2:10493187-10493206 None:intergenic 40.0%
CAAGATAATAAAGTAGGGGG+AGG + chr1_2:10493534-10493553 Msa0055470:CDS 40.0%
AGCATGTCAAACTCCTTTAG+AGG + chr1_2:10493582-10493601 Msa0055470:CDS 40.0%
! CTCCTTTAGAGGAAATGATC+AGG + chr1_2:10493593-10493612 Msa0055470:CDS 40.0%
GACCTGATCATTTCCTCTAA+AGG - chr1_2:10493598-10493617 None:intergenic 40.0%
CGAAACCGAGAAATCATACA+TGG - chr1_2:10493662-10493681 None:intergenic 40.0%
TACCTCACCTTCAAACCAAT+TGG + chr1_2:10494026-10494045 Msa0055470:CDS 40.0%
!! TCACTCACCAATTGGTTTGA+AGG - chr1_2:10494036-10494055 None:intergenic 40.0%
TTATCATCCCACTGCCAAAA+CGG - chr1_2:10494125-10494144 None:intergenic 40.0%
TATTGAATTGCAGGCAGATG+TGG + chr1_2:10494148-10494167 Msa0055470:CDS 40.0%
CTTATTGGTCCTTCATCTTG+AGG + chr1_2:10494506-10494525 Msa0055470:intron 40.0%
AAAAGCTAGTTATCAAGGGG+GGG + chr1_2:10494703-10494722 Msa0055470:intron 40.0%
GTCAAGTAGTATGGGATACT+CGG - chr1_2:10494765-10494784 None:intergenic 40.0%
TATCCCATACTACTTGACGT+GGG + chr1_2:10494767-10494786 Msa0055470:intron 40.0%
TTGGTATCAGATCTGGTTGT+CGG - chr1_2:10494885-10494904 None:intergenic 40.0%
GGAGATTGCAGAAACAAAGA+TGG + chr1_2:10495130-10495149 Msa0055470:intron 40.0%
ACTGTAGGCAAGTAATACTC+GGG + chr1_2:10495204-10495223 Msa0055470:intron 40.0%
GCTACTTGAAGACTTAGAGT+AGG + chr1_2:10495290-10495309 Msa0055470:intron 40.0%
GGTGGAATATTTAAGGGACT+TGG - chr1_2:10495464-10495483 None:intergenic 40.0%
ACATCCCATACTATTCGATG+TGG + chr1_2:10495486-10495505 Msa0055470:intron 40.0%
CATCCCATACTATTCGATGT+GGG + chr1_2:10495487-10495506 Msa0055470:intron 40.0%
AGTCCCACATCGAATAGTAT+GGG - chr1_2:10495493-10495512 None:intergenic 40.0%
AAGTCCCACATCGAATAGTA+TGG - chr1_2:10495494-10495513 None:intergenic 40.0%
ATAGGGACTTGGGTATTATG+GGG - chr1_2:10495523-10495542 None:intergenic 40.0%
GATAGGGACTTGGGTATTAT+GGG - chr1_2:10495524-10495543 None:intergenic 40.0%
TGATAGGGACTTGGGTATTA+TGG - chr1_2:10495525-10495544 None:intergenic 40.0%
TAGTTCTCTAGCTGGTGATA+GGG - chr1_2:10495540-10495559 None:intergenic 40.0%
ATAGTTCTCTAGCTGGTGAT+AGG - chr1_2:10495541-10495560 None:intergenic 40.0%
GGTTATCATAGTTCTCTAGC+TGG - chr1_2:10495548-10495567 None:intergenic 40.0%
CAATAGCATCTTCTCCTGTT+TGG + chr1_2:10495640-10495659 Msa0055470:intron 40.0%
!!! GTTGCGTTTTTGCCTTGTTT+TGG + chr1_2:10495662-10495681 Msa0055470:intron 40.0%
!!! TTTGGTGATGTTTTCCTGGT+TGG + chr1_2:10495680-10495699 Msa0055470:intron 40.0%
GCTTTGTCTCATTTCTTCGA+TGG + chr1_2:10495707-10495726 Msa0055470:intron 40.0%
!! TGCGTCTGTTTTACTAGCTT+TGG + chr1_2:10495746-10495765 Msa0055470:intron 40.0%
!!! TCTGTTTTACTAGCTTTGGC+TGG + chr1_2:10495750-10495769 Msa0055470:intron 40.0%
!!! CTGTTTTACTAGCTTTGGCT+GGG + chr1_2:10495751-10495770 Msa0055470:intron 40.0%
AGCTCAAGCTTGAAGAAGAA+TGG + chr1_2:10495801-10495820 Msa0055470:intron 40.0%
! ATGAAGCCTTTTTCCACTAG+GGG + chr1_2:10495990-10496009 Msa0055470:intron 40.0%
ACAAAAGTTGAGGGGTTCAT+TGG - chr1_2:10496086-10496105 None:intergenic 40.0%
! AACCCCTCAACTTTTGTTGA+GGG + chr1_2:10496089-10496108 Msa0055470:intron 40.0%
TTCCCTCAACAAAAGTTGAG+GGG - chr1_2:10496094-10496113 None:intergenic 40.0%
GTTCCCTCAACAAAAGTTGA+GGG - chr1_2:10496095-10496114 None:intergenic 40.0%
! ATTTTCCGTCGGATGAGAAA+TGG - chr1_2:10496399-10496418 None:intergenic 40.0%
! ACTTGCAAGCAATTTTCCGT+CGG - chr1_2:10496410-10496429 None:intergenic 40.0%
AAGTGGTGGTCATGACAAAA+AGG + chr1_2:10496426-10496445 Msa0055470:CDS 40.0%
CAACCTGCATTGTGAAACAA+AGG - chr1_2:10496613-10496632 None:intergenic 40.0%
TATGAAGATGTTGCAAGACG+AGG - chr1_2:10496725-10496744 None:intergenic 40.0%
GCGGGAAAAGACTATAATTG+TGG - chr1_2:10496876-10496895 None:intergenic 40.0%
GTGCATAGATCAAACGATCT+AGG - chr1_2:10497026-10497045 None:intergenic 40.0%
! TCACAGGCATAGTTGATGTT+CGG + chr1_2:10497111-10497130 Msa0055470:intron 40.0%
TTGTAATTACCAATGCAGCC+TGG + chr1_2:10497242-10497261 Msa0055470:intron 40.0%
TGTAATTACCAATGCAGCCT+GGG + chr1_2:10497243-10497262 Msa0055470:intron 40.0%
CACAATCACAAGAGCAGATA+AGG - chr1_2:10497340-10497359 None:intergenic 40.0%
ATCTGCTCTTGTGATTGTGA+TGG + chr1_2:10497341-10497360 Msa0055470:CDS 40.0%
GGTTTAGTAGTTGCGTATTG+AGG + chr1_2:10497456-10497475 Msa0055470:intron 40.0%
CACAGATGAGATTTCAACCT+CGG + chr1_2:10497535-10497554 Msa0055470:CDS 40.0%
AGCATGCCGATATTCTCTAA+AGG + chr1_2:10497620-10497639 Msa0055470:CDS 40.0%
! TGCCGATATTCTCTAAAGGT+TGG + chr1_2:10497624-10497643 Msa0055470:intron 40.0%
TATGCATTTCGTCTCAAGTC+TGG + chr1_2:10497703-10497722 Msa0055470:intron 40.0%
! GGAACATTTTCCATCCTATC+TGG + chr1_2:10497724-10497743 Msa0055470:intron 40.0%
CTGATGTTAACCAGATAGGA+TGG - chr1_2:10497737-10497756 None:intergenic 40.0%
AGAATTACCTAGACACGAGT+GGG - chr1_2:10497808-10497827 None:intergenic 40.0%
AAGAATTACCTAGACACGAG+TGG - chr1_2:10497809-10497828 None:intergenic 40.0%
CGACCCAAAAAAAATCATCG+TGG + chr1_2:10497896-10497915 Msa0055470:intron 40.0%
!!! CGGCCACGATGATTTTTTTT+GGG - chr1_2:10497902-10497921 None:intergenic 40.0%
CCAAAAAAAATCATCGTGGC+CGG + chr1_2:10497900-10497919 Msa0055470:intron 40.0%
GTTTGATTAATAGGCTTGCC+GGG - chr1_2:10497948-10497967 None:intergenic 40.0%
! TATTTGGAGATTCTGGCTGA+TGG - chr1_2:10498109-10498128 None:intergenic 40.0%
CTGAAGCTATTTGGATGTCT+AGG - chr1_2:10498177-10498196 None:intergenic 40.0%
ACCACATTATCTCTTCGTTG+TGG + chr1_2:10499071-10499090 Msa0055470:intron 40.0%
ACCACAACGAAGAGATAATG+TGG - chr1_2:10499075-10499094 None:intergenic 40.0%
TATCTCTTCGTTGTGGTGAA+CGG + chr1_2:10499078-10499097 Msa0055470:intron 40.0%
ACCACATTATCTCTTCGTTG+TGG + chr1_2:10499071-10499090 Msa0055470:intron 40.0%
ACCACATTATCTCTTCGTTG+TGG + chr1_2:10499071-10499090 Msa0055470:intron 40.0%
ACCACATTATCTCTTCGTTG+TGG + chr1_2:10499071-10499090 Msa0055470:intron 40.0%
TATCTCTTCGTTGCAGCAAA+CGG + chr1_2:10499242-10499261 Msa0055470:intron 40.0%
TATCTCTTCGTTGCAGCAAA+CGG + chr1_2:10499242-10499261 Msa0055470:intron 40.0%
TAATGTAGCCTATGACGTAC+GGG - chr1_2:10499358-10499377 None:intergenic 40.0%
TAATGTAGCCTATGACGTAC+GGG - chr1_2:10499358-10499377 None:intergenic 40.0%
GAAATTTGTGCTCAACCTGA+AGG + chr1_2:10499952-10499971 Msa0055470:intron 40.0%
GAGGTCTAAGGAACACATTA+TGG + chr1_2:10500018-10500037 Msa0055470:intron 40.0%
GAAACAAAATCTTGCTCCAC+TGG - chr1_2:10500127-10500146 None:intergenic 40.0%
GGGTTCAAGTGGAAAAGAAA+TGG - chr1_2:10500385-10500404 None:intergenic 40.0%
!! CAAATGGATTAGGGTTCAAG+TGG - chr1_2:10500396-10500415 None:intergenic 40.0%
!!! AGAGTGTAGAAAGGGCATTT+TGG - chr1_2:10500644-10500663 None:intergenic 40.0%
! GTTGAGGAAGAGTGTAGAAA+GGG - chr1_2:10500652-10500671 None:intergenic 40.0%
! AGTTGAGGAAGAGTGTAGAA+AGG - chr1_2:10500653-10500672 None:intergenic 40.0%
GCGGCAAATTTCATTCTCAA+TGG + chr1_2:10500706-10500725 Msa0055470:intron 40.0%
ACACTATCCAGATGTTACAC+CGG + chr1_2:10501055-10501074 Msa0055470:intron 40.0%
AATTACACCGGTGTAACATC+TGG - chr1_2:10501065-10501084 None:intergenic 40.0%
GTTCATGAGCTTAGCTGTAA+TGG + chr1_2:10501536-10501555 Msa0055470:CDS 40.0%
ACAGTGAAGAATACGTTGGA+TGG - chr1_2:10501586-10501605 None:intergenic 40.0%
TCCAACGTATTCTTCACTGT+TGG + chr1_2:10501586-10501605 Msa0055470:CDS 40.0%
ACCAACAGTGAAGAATACGT+TGG - chr1_2:10501590-10501609 None:intergenic 40.0%
CTACTATGATCTGCAGTCAT+TGG + chr1_2:10501899-10501918 Msa0055470:intron 40.0%
CGTTTCAACTGTAAACGGTT+TGG + chr1_2:10501992-10502011 Msa0055470:CDS 40.0%
CATAGAAAAAAGAGGGTGGT+TGG - chr1_2:10502181-10502200 None:intergenic 40.0%
GCACAGAAACATGAACACAG+AGG - chr1_2:10488798-10488817 None:intergenic 45.0%
TCAGCATGTCTCAGACTAAC+TGG + chr1_2:10488910-10488929 Msa0055470:exon 45.0%
CAGCATGTCTCAGACTAACT+GGG + chr1_2:10488911-10488930 Msa0055470:exon 45.0%
CCCTCTTCACAAGGTAATCA+TGG - chr1_2:10489394-10489413 None:intergenic 45.0%
GGATTTGAAAGCTTCTGCTC+AGG + chr1_2:10489412-10489431 Msa0055470:CDS 45.0%
!! CTCAGGCTTTTCAAGCTGAA+GGG + chr1_2:10489429-10489448 Msa0055470:CDS 45.0%
CACTCGAACAAAAATCCTCC+CGG - chr1_2:10489584-10489603 None:intergenic 45.0%
! GAGGATTTTTGTTCGAGTGG+TGG + chr1_2:10489585-10489604 Msa0055470:CDS 45.0%
! TCTGGGACATATTCATTGCC+AGG + chr1_2:10489615-10489634 Msa0055470:CDS 45.0%
ACCAACCTCGATATAAGACG+CGG - chr1_2:10489666-10489685 None:intergenic 45.0%
GTTTAGCTGTTAGGGGAAGT+TGG + chr1_2:10489931-10489950 Msa0055470:intron 45.0%
GTTTGACACCAAAGCTAGCA+TGG - chr1_2:10490374-10490393 None:intergenic 45.0%
! TTTGCCGCGCTTGAAGTTTT+CGG + chr1_2:10490539-10490558 Msa0055470:intron 45.0%
CAAACCGAAAACTTCAAGCG+CGG - chr1_2:10490546-10490565 None:intergenic 45.0%
TGTTGATGTGGTGATTGCTG+AGG - chr1_2:10490640-10490659 None:intergenic 45.0%
TGTTGTTGCTGCTGATGTTG+CGG - chr1_2:10490781-10490800 None:intergenic 45.0%
CAACAGCAACAGCAACAACA+GGG + chr1_2:10490808-10490827 Msa0055470:CDS 45.0%
GATAGGGCTCATCTCTTGAA+TGG + chr1_2:10490835-10490854 Msa0055470:CDS 45.0%
!! TTGAATGGTGGTGGTGCAAA+TGG + chr1_2:10490850-10490869 Msa0055470:CDS 45.0%
!! GGTGGTGCAAATGGATTAGT+TGG + chr1_2:10490859-10490878 Msa0055470:CDS 45.0%
GCTATAGCATTTGCAGTGCT+AGG - chr1_2:10490889-10490908 None:intergenic 45.0%
TCCCCTTCAAAGGGATTCTT+TGG + chr1_2:10490939-10490958 Msa0055470:CDS 45.0%
! AGATGCTGCAATGAAGGTAC+AGG + chr1_2:10490963-10490982 Msa0055470:intron 45.0%
! GATGCTGCAATGAAGGTACA+GGG + chr1_2:10490964-10490983 Msa0055470:intron 45.0%
! ATGCTGCAATGAAGGTACAG+GGG + chr1_2:10490965-10490984 Msa0055470:intron 45.0%
AAGAAAATTACCCTGACGGC+TGG - chr1_2:10491142-10491161 None:intergenic 45.0%
GTGATCGCGAAAATAGTGGT+CGG - chr1_2:10491359-10491378 None:intergenic 45.0%
! ATAGTTCTCTTTGGAGGGGA+GGG + chr1_2:10491459-10491478 Msa0055470:intron 45.0%
!! CTTTAAGGTCATGGAAGGAG+CGG - chr1_2:10491521-10491540 None:intergenic 45.0%
TGACTACGAGCTTGAACTTG+TGG - chr1_2:10491783-10491802 None:intergenic 45.0%
TGTATTGAATCCCAGAGCTG+CGG + chr1_2:10491930-10491949 Msa0055470:CDS 45.0%
! GGATCATTGATGGCAATTCC+TGG + chr1_2:10491961-10491980 Msa0055470:CDS 45.0%
GTTCCAGGATCAAATCAAGG+TGG + chr1_2:10492190-10492209 Msa0055470:intron 45.0%
! TTGCCACCTTGATTTGATCC+TGG - chr1_2:10492196-10492215 None:intergenic 45.0%
! GATTGTGTGCTGGAGTCTTT+TGG + chr1_2:10492354-10492373 Msa0055470:intron 45.0%
!!! GGAGTCTTTTGGAGTGAGAT+AGG + chr1_2:10492365-10492384 Msa0055470:intron 45.0%
CCAAGGGAAGGAAACAGTTA+GGG - chr1_2:10492449-10492468 None:intergenic 45.0%
TCAATCAGACAAGGGAGGTT+TGG - chr1_2:10492524-10492543 None:intergenic 45.0%
CCATTTCAATCAGACAAGGG+AGG - chr1_2:10492529-10492548 None:intergenic 45.0%
CCTCCCTTGTCTGATTGAAA+TGG + chr1_2:10492526-10492545 Msa0055470:intron 45.0%
CCCTTGTCTGATTGAAATGG+TGG + chr1_2:10492529-10492548 Msa0055470:intron 45.0%
GCCACCATTTCAATCAGACA+AGG - chr1_2:10492533-10492552 None:intergenic 45.0%
GCACCAAGTTCAATAGCACT+GGG - chr1_2:10492708-10492727 None:intergenic 45.0%
TGCACCAAGTTCAATAGCAC+TGG - chr1_2:10492709-10492728 None:intergenic 45.0%
GGTTTGGATCAACTTCGTTC+TGG + chr1_2:10492972-10492991 Msa0055470:CDS 45.0%
GGCTGTGGACTTTGTATGAA+AGG - chr1_2:10493017-10493036 None:intergenic 45.0%
!! GGAAGTTGATGAAAAGGCTG+TGG - chr1_2:10493032-10493051 None:intergenic 45.0%
TATGTTAGCTCAGCAGAACC+TGG + chr1_2:10493082-10493101 Msa0055470:CDS 45.0%
CTACTATCATCACTGGCAGA+AGG - chr1_2:10493113-10493132 None:intergenic 45.0%
TCGAAATATGGGCGTAGGTA+AGG + chr1_2:10493157-10493176 Msa0055470:CDS 45.0%
AATATGGGCGTAGGTAAGGA+TGG + chr1_2:10493161-10493180 Msa0055470:CDS 45.0%
GATGGCCTTTCAAATCCTGT+TGG + chr1_2:10493179-10493198 Msa0055470:CDS 45.0%
AAGTTGCTGCTGTTGTGGAT+TGG - chr1_2:10493454-10493473 None:intergenic 45.0%
TGTTGAAGTTGCTGCTGTTG+TGG - chr1_2:10493459-10493478 None:intergenic 45.0%
GATAATAAAGTAGGGGGAGG+TGG + chr1_2:10493537-10493556 Msa0055470:CDS 45.0%
GTTTGACATGCTACCATCTC+CGG - chr1_2:10493574-10493593 None:intergenic 45.0%
AAGCAGCCTGTATCTTCTTC+TGG + chr1_2:10493826-10493845 Msa0055470:CDS 45.0%
!! GGCATTGATATCACATCACC+AGG - chr1_2:10493937-10493956 None:intergenic 45.0%
!! ATGTTTAGCACTGATGGCAC+CGG + chr1_2:10493997-10494016 Msa0055470:CDS 45.0%
TGAAGGTGAGGTAAGAGTTC+CGG - chr1_2:10494019-10494038 None:intergenic 45.0%
!! CACCAATTGGTTTGAAGGTG+AGG - chr1_2:10494031-10494050 None:intergenic 45.0%
TGGAAGAGTCACTCACCAAT+TGG - chr1_2:10494044-10494063 None:intergenic 45.0%
TGGCAATGAGTCTACATGCA+AGG - chr1_2:10494100-10494119 None:intergenic 45.0%
! GACTCATTGCCATTCCGTTT+TGG + chr1_2:10494108-10494127 Msa0055470:intron 45.0%
!! GTTTTGGCAGTGGGATGATA+AGG + chr1_2:10494124-10494143 Msa0055470:intron 45.0%
TACGTCCAACTGGATCTCTA+GGG - chr1_2:10494241-10494260 None:intergenic 45.0%
ATACGTCCAACTGGATCTCT+AGG - chr1_2:10494242-10494261 None:intergenic 45.0%
TAGAGATCCAGTTGGACGTA+TGG + chr1_2:10494241-10494260 Msa0055470:CDS 45.0%
CTTACATCCATACGTCCAAC+TGG - chr1_2:10494251-10494270 None:intergenic 45.0%
GGACGTATGGATGTAAGCAA+AGG + chr1_2:10494254-10494273 Msa0055470:CDS 45.0%
! TACTCGGTGGAGCATTTAAG+TGG - chr1_2:10494749-10494768 None:intergenic 45.0%
AAGTAGTATGGGATACTCGG+TGG - chr1_2:10494762-10494781 None:intergenic 45.0%
GTATCCCATACTACTTGACG+TGG + chr1_2:10494766-10494785 Msa0055470:intron 45.0%
AGTCCCACGTCAAGTAGTAT+GGG - chr1_2:10494773-10494792 None:intergenic 45.0%
AAGTCCCACGTCAAGTAGTA+TGG - chr1_2:10494774-10494793 None:intergenic 45.0%
AAGCATGGGTACGACAGAAA+TGG + chr1_2:10494925-10494944 Msa0055470:intron 45.0%
!! AAATGGAGGAGTACCCATAC+TGG + chr1_2:10494942-10494961 Msa0055470:intron 45.0%
TACCAGAGATGATCAAGTGC+GGG - chr1_2:10495026-10495045 None:intergenic 45.0%
GTACCAGAGATGATCAAGTG+CGG - chr1_2:10495027-10495046 None:intergenic 45.0%
GCACTTGATCATCTCTGGTA+CGG + chr1_2:10495026-10495045 Msa0055470:intron 45.0%
CGTGATAAAAGATGCAGCGA+CGG + chr1_2:10495109-10495128 Msa0055470:intron 45.0%
! AGTGATGAAGATTTGGTCCC+TGG + chr1_2:10495153-10495172 Msa0055470:intron 45.0%
CTGTAGGCAAGTAATACTCG+GGG + chr1_2:10495205-10495224 Msa0055470:intron 45.0%
!! TAATATTGGGATTGGCTCGC+TGG + chr1_2:10495233-10495252 Msa0055470:intron 45.0%
GAATAGTATGGGATGTTCGG+TGG - chr1_2:10495482-10495501 None:intergenic 45.0%
AGGCAAAAACGCAACCAAAC+AGG - chr1_2:10495657-10495676 None:intergenic 45.0%
CTGATTGTTCGCTAGCAATC+AGG + chr1_2:10495879-10495898 Msa0055470:intron 45.0%
!! GGAATCAGTGTTGGCGTAAA+AGG + chr1_2:10495946-10495965 Msa0055470:intron 45.0%
! TGAAGCCTTTTTCCACTAGG+GGG + chr1_2:10495991-10496010 Msa0055470:intron 45.0%
! AGGGGGATTGGCAACATAAA+AGG + chr1_2:10496008-10496027 Msa0055470:intron 45.0%
TCTAAGGAGCAAAGCTAAGC+TGG + chr1_2:10496060-10496079 Msa0055470:intron 45.0%
! GAACCCCTCAACTTTTGTTG+AGG + chr1_2:10496088-10496107 Msa0055470:intron 45.0%
GGTTCCCTCAACAAAAGTTG+AGG - chr1_2:10496096-10496115 None:intergenic 45.0%
TAATATTATTCGGGGGGGCA+AGG - chr1_2:10496130-10496149 None:intergenic 45.0%
TGTAGCCATTTCTCATCCGA+CGG + chr1_2:10496391-10496410 Msa0055470:CDS 45.0%
GACGGAAAATTGCTTGCAAG+TGG + chr1_2:10496409-10496428 Msa0055470:CDS 45.0%
GGAAAATTGCTTGCAAGTGG+TGG + chr1_2:10496412-10496431 Msa0055470:CDS 45.0%
ATGACAAAACTGTCCGGGTT+TGG + chr1_2:10496744-10496763 Msa0055470:CDS 45.0%
TGACAAAACTGTCCGGGTTT+GGG + chr1_2:10496745-10496764 Msa0055470:CDS 45.0%
CATTGTCAACATCCCAAACC+CGG - chr1_2:10496760-10496779 None:intergenic 45.0%
!!! CTTTTCCCGCCTTTGAAATG+TGG + chr1_2:10496886-10496905 Msa0055470:intron 45.0%
ATGAGCCACATTTCAAAGGC+GGG - chr1_2:10496894-10496913 None:intergenic 45.0%
GATGAGCCACATTTCAAAGG+CGG - chr1_2:10496895-10496914 None:intergenic 45.0%
GCAGATGAGCCACATTTCAA+AGG - chr1_2:10496898-10496917 None:intergenic 45.0%
TATTCGCTTCGTACCTTCAC+TGG + chr1_2:10497266-10497285 Msa0055470:CDS 45.0%
ATTCGCTTCGTACCTTCACT+GGG + chr1_2:10497267-10497286 Msa0055470:CDS 45.0%
! CAGTTGTGCTAGAGTGTCAA+AGG + chr1_2:10497394-10497413 Msa0055470:CDS 45.0%
TTTCACCAATTAGGGTGGCA+TGG + chr1_2:10497512-10497531 Msa0055470:intron 45.0%
ATGAGATTTCAACCTCGGCT+AGG + chr1_2:10497540-10497559 Msa0055470:CDS 45.0%
TGAGATTTCAACCTCGGCTA+GGG + chr1_2:10497541-10497560 Msa0055470:CDS 45.0%
TAAAGATCCCACTCGTGTCT+AGG + chr1_2:10497798-10497817 Msa0055470:intron 45.0%
AGATGTTTGAAGGTGGGTAC+CGG + chr1_2:10497856-10497875 Msa0055470:intron 45.0%
CGTGACAGTTATTCTTCCAC+CGG - chr1_2:10497878-10497897 None:intergenic 45.0%
!!! CCGGCCACGATGATTTTTTT+TGG - chr1_2:10497903-10497922 None:intergenic 45.0%
CGAACTAGATCATTCTAGCC+CGG + chr1_2:10497927-10497946 Msa0055470:intron 45.0%
GCCACAACGAAGAGATAATG+TGG - chr1_2:10499111-10499130 None:intergenic 45.0%
TATCTCTTCGTTGTGGCGAA+CGG + chr1_2:10499114-10499133 Msa0055470:intron 45.0%
GCCACAACGAAGAGATAATG+TGG - chr1_2:10499111-10499130 None:intergenic 45.0%
TATCTCTTCGTTGTGGCGAA+CGG + chr1_2:10499114-10499133 Msa0055470:intron 45.0%
GCCACAACGAAGAGATAATG+TGG - chr1_2:10499111-10499130 None:intergenic 45.0%
TATCTCTTCGTTGTGGCGAA+CGG + chr1_2:10499114-10499133 Msa0055470:intron 45.0%
TACTATGACCCGTACGTCAT+AGG + chr1_2:10499414-10499433 Msa0055470:intron 45.0%
! TGCTTTGCTATAGCCTGAGT+TGG - chr1_2:10499636-10499655 None:intergenic 45.0%
! AGACACAGGGGTACAAAAAC+AGG + chr1_2:10499868-10499887 Msa0055470:intron 45.0%
GATGGGAGACCAATTAAGAG+TGG - chr1_2:10500329-10500348 None:intergenic 45.0%
! TGCCACTCTCTTTTCTCTCA+CGG - chr1_2:10500584-10500603 None:intergenic 45.0%
TACTGAACAACTCTGTTGCC+TGG + chr1_2:10501278-10501297 Msa0055470:intron 45.0%
TGTGTGACCCTGCAATTCAT+AGG - chr1_2:10501408-10501427 None:intergenic 45.0%
! TCTGTTTGTTGGGATCCTTC+TGG + chr1_2:10501440-10501459 Msa0055470:CDS 45.0%
CAAGGAAATGTAGACTTGCC+TGG - chr1_2:10501625-10501644 None:intergenic 45.0%
! CAGAGTCATCGTCTTGTTCT+CGG - chr1_2:10501940-10501959 None:intergenic 45.0%
CTGGCCGTTTCAACTGTAAA+CGG + chr1_2:10501987-10502006 Msa0055470:CDS 45.0%
CTTGACAAACCTGTCATGAC+TGG - chr1_2:10502027-10502046 None:intergenic 45.0%
ATGACAGGTTTGTCAAGCTC+TGG + chr1_2:10502030-10502049 Msa0055470:CDS 45.0%
AGAAAAAAGAGGGTGGTTGG+TGG - chr1_2:10502178-10502197 None:intergenic 45.0%
CATGTCTCAGACTAACTGGG+AGG + chr1_2:10488914-10488933 Msa0055470:exon 50.0%
!! GCTCAGGCTTTTCAAGCTGA+AGG + chr1_2:10489428-10489447 Msa0055470:CDS 50.0%
GATTGCAGCTATTGACGCTC+CGG + chr1_2:10489562-10489581 Msa0055470:intron 50.0%
ATTGCAGCTATTGACGCTCC+GGG + chr1_2:10489563-10489582 Msa0055470:intron 50.0%
! CGGGAGGATTTTTGTTCGAG+TGG + chr1_2:10489582-10489601 Msa0055470:CDS 50.0%
!! CAGGACGAACGAGAAGCATT+CGG + chr1_2:10489634-10489653 Msa0055470:CDS 50.0%
AGTTGCCGCGTCTTATATCG+AGG + chr1_2:10489658-10489677 Msa0055470:CDS 50.0%
! AAGCCACTCCATGCTAGCTT+TGG + chr1_2:10490363-10490382 Msa0055470:intron 50.0%
ACACCAAAGCTAGCATGGAG+TGG - chr1_2:10490369-10490388 None:intergenic 50.0%
TGTGGTGATTGCTGAGGTTG+TGG - chr1_2:10490634-10490653 None:intergenic 50.0%
GCAACAGCAACAGCAACAAC+AGG + chr1_2:10490807-10490826 Msa0055470:CDS 50.0%
AGCAACAGCAACAACAGGGT+AGG + chr1_2:10490812-10490831 Msa0055470:CDS 50.0%
GCAACAGCAACAACAGGGTA+GGG + chr1_2:10490813-10490832 Msa0055470:CDS 50.0%
AGCAACAACAGGGTAGGGAT+AGG + chr1_2:10490818-10490837 Msa0055470:CDS 50.0%
GCAACAACAGGGTAGGGATA+GGG + chr1_2:10490819-10490838 Msa0055470:CDS 50.0%
AGGGCTCATCTCTTGAATGG+TGG + chr1_2:10490838-10490857 Msa0055470:CDS 50.0%
GCTCATCTCTTGAATGGTGG+TGG + chr1_2:10490841-10490860 Msa0055470:CDS 50.0%
!! ATGAAGGTACAGGGGTGTTC+CGG + chr1_2:10490973-10490992 Msa0055470:intron 50.0%
CTGAAGTCTTCTGCAGCTAC+TGG + chr1_2:10491116-10491135 Msa0055470:CDS 50.0%
CAGAAGGTAGTATAGCGCTG+CGG + chr1_2:10491227-10491246 Msa0055470:intron 50.0%
! GATAGTTCTCTTTGGAGGGG+AGG + chr1_2:10491458-10491477 Msa0055470:intron 50.0%
GAGGGCGAGTGCTTAATGTT+CGG + chr1_2:10491477-10491496 Msa0055470:intron 50.0%
! GTTGTGGTGTCAGCATAGCT+GGG - chr1_2:10491631-10491650 None:intergenic 50.0%
! AGTTGTGGTGTCAGCATAGC+TGG - chr1_2:10491632-10491651 None:intergenic 50.0%
!!! CAAGTTTTGCATGGTGCTGC+TGG + chr1_2:10491747-10491766 Msa0055470:CDS 50.0%
CTCGTAGTCAGCAACTACCA+GGG + chr1_2:10491793-10491812 Msa0055470:CDS 50.0%
!! GGTTTTCCTGACTTGCCACT+TGG + chr1_2:10491878-10491897 Msa0055470:intron 50.0%
CTGATTCCAAGTGGCAAGTC+AGG - chr1_2:10491887-10491906 None:intergenic 50.0%
! CTGACTTGCCACTTGGAATC+AGG + chr1_2:10491885-10491904 Msa0055470:intron 50.0%
!! GCAGCTCTGGGATTCAATAC+AGG - chr1_2:10491931-10491950 None:intergenic 50.0%
GTATTGAATCCCAGAGCTGC+GGG + chr1_2:10491931-10491950 Msa0055470:CDS 50.0%
CCCTAACTGTTTCCTTCCCT+TGG + chr1_2:10492446-10492465 Msa0055470:intron 50.0%
GCCAAGGGAAGGAAACAGTT+AGG - chr1_2:10492450-10492469 None:intergenic 50.0%
! CAGACAAGGGAGGTTTGGTA+AGG - chr1_2:10492519-10492538 None:intergenic 50.0%
! TTCAATAGCACTGGGCGTGA+TGG - chr1_2:10492700-10492719 None:intergenic 50.0%
! ACGCCCAGTGCTATTGAACT+TGG + chr1_2:10492702-10492721 Msa0055470:intron 50.0%
TCTGTATCCCCACGAGGAAA+TGG - chr1_2:10493251-10493270 None:intergenic 50.0%
AGCATATCTGTATCCCCACG+AGG - chr1_2:10493257-10493276 None:intergenic 50.0%
AATAAAGTAGGGGGAGGTGG+TGG + chr1_2:10493540-10493559 Msa0055470:CDS 50.0%
ACATGGCTCAATTGCACGCA+CGG - chr1_2:10493645-10493664 None:intergenic 50.0%
AAGGTTTCCAAAAGCCAGCC+TGG + chr1_2:10493793-10493812 Msa0055470:intron 50.0%
!!! CTTTCTTCCAGGCTGGCTTT+TGG - chr1_2:10493803-10493822 None:intergenic 50.0%
GCTTTCTCTTTCTTCCAGGC+TGG - chr1_2:10493810-10493829 None:intergenic 50.0%
! GGCTGCTTTCTCTTTCTTCC+AGG - chr1_2:10493814-10493833 None:intergenic 50.0%
GCAGGACCAGAAGAAGATAC+AGG - chr1_2:10493835-10493854 None:intergenic 50.0%
TCCTGCCAATAGCTCAGGAA+CGG + chr1_2:10493849-10493868 Msa0055470:CDS 50.0%
ATTCGCCGTTCCTGAGCTAT+TGG - chr1_2:10493857-10493876 None:intergenic 50.0%
!! TTGCCATTCCGTTTTGGCAG+TGG + chr1_2:10494114-10494133 Msa0055470:intron 50.0%
!! TGCCATTCCGTTTTGGCAGT+GGG + chr1_2:10494115-10494134 Msa0055470:intron 50.0%
ATCCCACTGCCAAAACGGAA+TGG - chr1_2:10494120-10494139 None:intergenic 50.0%
AGATGTGGACCGCTTTGTAG+AGG + chr1_2:10494163-10494182 Msa0055470:CDS 50.0%
GAGATCCGTCCTCTACAAAG+CGG - chr1_2:10494175-10494194 None:intergenic 50.0%
ACAGACCCTAGAGATCCAGT+TGG + chr1_2:10494233-10494252 Msa0055470:CDS 50.0%
GTCCTTCATCTTGAGGCTGA+CGG + chr1_2:10494513-10494532 Msa0055470:intron 50.0%
! GACGGTGGCATGCTTTTCTT+CGG + chr1_2:10494531-10494550 Msa0055470:intron 50.0%
CGTTGTAGAGAGCAGACGTA+TGG - chr1_2:10494809-10494828 None:intergenic 50.0%
GTATCAGATCTGGTTGTCGG+TGG - chr1_2:10494882-10494901 None:intergenic 50.0%
CATGGGTACGACAGAAATGG+AGG + chr1_2:10494928-10494947 Msa0055470:intron 50.0%
TTCCCGCACTTGATCATCTC+TGG + chr1_2:10495021-10495040 Msa0055470:intron 50.0%
TGATCATCTCTGGTACGGCT+CGG + chr1_2:10495031-10495050 Msa0055470:intron 50.0%
! GATGAAGATTTGGTCCCTGG+CGG + chr1_2:10495156-10495175 Msa0055470:intron 50.0%
CTAGCTGGTGATAGGGACTT+GGG - chr1_2:10495533-10495552 None:intergenic 50.0%
TCTAGCTGGTGATAGGGACT+TGG - chr1_2:10495534-10495553 None:intergenic 50.0%
GAGACAAAGCAGATCCAACC+AGG - chr1_2:10495697-10495716 None:intergenic 50.0%
CCAATCCCCCTAGTGGAAAA+AGG - chr1_2:10495999-10496018 None:intergenic 50.0%
! CCTTTTTCCACTAGGGGGAT+TGG + chr1_2:10495996-10496015 Msa0055470:intron 50.0%
TATGTTGCCAATCCCCCTAG+TGG - chr1_2:10496006-10496025 None:intergenic 50.0%
GAGGCATGCTTGGACTGAAA+CGG - chr1_2:10496706-10496725 None:intergenic 50.0%
AAGGTACGAAGCGAATACCC+AGG - chr1_2:10497263-10497282 None:intergenic 50.0%
! GAATGATCTAGTTCGTGCGC+CGG - chr1_2:10497922-10497941 None:intergenic 50.0%
! GAGATTCTGGCTGATGGAAC+AGG - chr1_2:10498103-10498122 None:intergenic 50.0%
TACTATGGCCCGTACGTCAT+AGG + chr1_2:10499347-10499366 Msa0055470:intron 50.0%
GGGAGAAAGGATGAAGTGCA+CGG + chr1_2:10500520-10500539 Msa0055470:intron 50.0%
CCACCTCCCTTCTTCTTTCT+CGG - chr1_2:10500546-10500565 None:intergenic 50.0%
TCCCGTGAGAGAAAAGAGAG+TGG + chr1_2:10500579-10500598 Msa0055470:intron 50.0%
! GCCACTCTCTTTTCTCTCAC+GGG - chr1_2:10500583-10500602 None:intergenic 50.0%
TGTCAGTGAGGACTCTGTCA+GGG + chr1_2:10501478-10501497 Msa0055470:CDS 50.0%
TCTGTCAGGGTTTGGACTCT+TGG + chr1_2:10501491-10501510 Msa0055470:CDS 50.0%
AGGGTTTGGACTCTTGGATC+CGG + chr1_2:10501497-10501516 Msa0055470:CDS 50.0%
AACACATTCCCCTTCACTCC+CGG - chr1_2:10501519-10501538 None:intergenic 50.0%
! GTTGGTCATTGGCTGTTACC+AGG + chr1_2:10501604-10501623 Msa0055470:CDS 50.0%
ATCTGCAGTCATTGGAGCTG+TGG + chr1_2:10501907-10501926 Msa0055470:intron 50.0%
ATGACTCTGTCTGCTCACGA+CGG + chr1_2:10501951-10501970 Msa0055470:CDS 50.0%
TTGCTTCTGCCAGTCATGAC+AGG + chr1_2:10502015-10502034 Msa0055470:CDS 50.0%
! CTCTGGAAGTGACCTTAACC+TGG + chr1_2:10502047-10502066 Msa0055470:exon 50.0%
!! TCGAGTGGTGGTCGGTTTTC+TGG + chr1_2:10489597-10489616 Msa0055470:CDS 55.0%
!! CGAGTGGTGGTCGGTTTTCT+GGG + chr1_2:10489598-10489617 Msa0055470:CDS 55.0%
CGAATGCTTCTCGTTCGTCC+TGG - chr1_2:10489636-10489655 None:intergenic 55.0%
GCCGCGTCTTATATCGAGGT+TGG + chr1_2:10489662-10489681 Msa0055470:intron 55.0%
TGCTGCTGCTGCTGTTGATG+TGG - chr1_2:10490652-10490671 None:intergenic 55.0%
GCTCGTAGTCAGCAACTACC+AGG + chr1_2:10491792-10491811 Msa0055470:CDS 55.0%
GCAACTACCAGGGTCTACTC+CGG + chr1_2:10491803-10491822 Msa0055470:CDS 55.0%
TAGTGTACCGGAGTAGACCC+TGG - chr1_2:10491813-10491832 None:intergenic 55.0%
GGGTCCCGAAGGATCATTGA+TGG + chr1_2:10491951-10491970 Msa0055470:CDS 55.0%
TGGAGGACCACCTGCTTGAA+GGG - chr1_2:10493231-10493250 None:intergenic 55.0%
ATGGAGGACCACCTGCTTGA+AGG - chr1_2:10493232-10493251 None:intergenic 55.0%
GTGGTCCTCCATTTCCTCGT+GGG + chr1_2:10493240-10493259 Msa0055470:CDS 55.0%
TGGTCCTCCATTTCCTCGTG+GGG + chr1_2:10493241-10493260 Msa0055470:CDS 55.0%
GTATCCCCACGAGGAAATGG+AGG - chr1_2:10493248-10493267 None:intergenic 55.0%
TCTGGTCCTGCCAATAGCTC+AGG + chr1_2:10493844-10493863 Msa0055470:CDS 55.0%
TCAGGAACGGCGAATACAGC+AGG + chr1_2:10493862-10493881 Msa0055470:CDS 55.0%
!! GGAGTTGAGGGTGCTGAACT+CGG - chr1_2:10493895-10493914 None:intergenic 55.0%
GTTGAGCCTGAGGGAGTTGA+GGG - chr1_2:10493907-10493926 None:intergenic 55.0%
AGTTGAGCCTGAGGGAGTTG+AGG - chr1_2:10493908-10493927 None:intergenic 55.0%
! GGCGTATGAGTTGAGCCTGA+GGG - chr1_2:10493916-10493935 None:intergenic 55.0%
! AGGCGTATGAGTTGAGCCTG+AGG - chr1_2:10493917-10493936 None:intergenic 55.0%
TCAGGCTCAACTCATACGCC+TGG + chr1_2:10493916-10493935 Msa0055470:CDS 55.0%
GTGGACCGCTTTGTAGAGGA+CGG + chr1_2:10494167-10494186 Msa0055470:CDS 55.0%
CACCGTCAGCCTCAAGATGA+AGG - chr1_2:10494518-10494537 None:intergenic 55.0%
CTTCATCTTGAGGCTGACGG+TGG + chr1_2:10494516-10494535 Msa0055470:intron 55.0%
AGCTAGTTATCAAGGGGGGG+TGG + chr1_2:10494706-10494725 Msa0055470:intron 55.0%
GCTAGTTATCAAGGGGGGGT+GGG + chr1_2:10494707-10494726 Msa0055470:intron 55.0%
GAGAGCAGACGTATGGACGT+CGG - chr1_2:10494802-10494821 None:intergenic 55.0%
GAAAGGGCTGTCTACAGAGG+GGG - chr1_2:10494855-10494874 None:intergenic 55.0%
GGAAAGGGCTGTCTACAGAG+GGG - chr1_2:10494856-10494875 None:intergenic 55.0%
CGGAAAGGGCTGTCTACAGA+GGG - chr1_2:10494857-10494876 None:intergenic 55.0%
TCGGAAAGGGCTGTCTACAG+AGG - chr1_2:10494858-10494877 None:intergenic 55.0%
AGATCTGGTTGTCGGTGGCT+CGG - chr1_2:10494877-10494896 None:intergenic 55.0%
GTTGCAAGACGAGGCATGCT+TGG - chr1_2:10496716-10496735 None:intergenic 55.0%
AGCGAATACCCAGGCTGCAT+TGG - chr1_2:10497254-10497273 None:intergenic 55.0%
AGCTGCAGAATGCCCAGTGA+AGG - chr1_2:10497282-10497301 None:intergenic 55.0%
CTGTGCCATGCCACCCTAAT+TGG - chr1_2:10497520-10497539 None:intergenic 55.0%
!! TGTTTGAAGGTGGGTACCGG+TGG + chr1_2:10497859-10497878 Msa0055470:intron 55.0%
TGCACGGCCGAGAAAGAAGA+AGG + chr1_2:10500536-10500555 Msa0055470:intron 55.0%
GCACGGCCGAGAAAGAAGAA+GGG + chr1_2:10500537-10500556 Msa0055470:intron 55.0%
CCGAGAAAGAAGAAGGGAGG+TGG + chr1_2:10500543-10500562 Msa0055470:intron 55.0%
! GGATCCTTCTGGAGAGTTCC+TGG + chr1_2:10501451-10501470 Msa0055470:CDS 55.0%
GATGCCAGGAACTCTCCAGA+AGG - chr1_2:10501458-10501477 None:intergenic 55.0%
GTTCCTGGCATCTGTCAGTG+AGG + chr1_2:10501466-10501485 Msa0055470:CDS 55.0%
AGTCCTCACTGACAGATGCC+AGG - chr1_2:10501472-10501491 None:intergenic 55.0%
CTGTCAGTGAGGACTCTGTC+AGG + chr1_2:10501477-10501496 Msa0055470:CDS 55.0%
GTGAGGACTCTGTCAGGGTT+TGG + chr1_2:10501483-10501502 Msa0055470:CDS 55.0%
GGGTTTGGACTCTTGGATCC+GGG + chr1_2:10501498-10501517 Msa0055470:CDS 55.0%
ACTCTTGGATCCGGGAGTGA+AGG + chr1_2:10501506-10501525 Msa0055470:CDS 55.0%
CTCTTGGATCCGGGAGTGAA+GGG + chr1_2:10501507-10501526 Msa0055470:CDS 55.0%
TCTTGGATCCGGGAGTGAAG+GGG + chr1_2:10501508-10501527 Msa0055470:CDS 55.0%
!! CGACGGTCTTATTGCTGCAC+TGG + chr1_2:10501968-10501987 Msa0055470:CDS 55.0%
GGAAGTGACCTTAACCTGGC+CGG + chr1_2:10502051-10502070 Msa0055470:exon 55.0%
ATGGTACACCGGCCAGGTTA+AGG - chr1_2:10502062-10502081 None:intergenic 55.0%
ACAACAATGGTACACCGGCC+AGG - chr1_2:10502068-10502087 None:intergenic 55.0%
GCTGTTGCTGCTGTTGCTGC+TGG - chr1_2:10490723-10490742 None:intergenic 60.0%
CACTGGCAGAAGGTGATGCC+AGG - chr1_2:10493103-10493122 None:intergenic 60.0%
GTTGGATCGCCCCTTCAAGC+AGG + chr1_2:10493218-10493237 Msa0055470:CDS 60.0%
GGAGGACCACCTGCTTGAAG+GGG - chr1_2:10493230-10493249 None:intergenic 60.0%
GGTGGTCCTCCATTTCCTCG+TGG + chr1_2:10493239-10493258 Msa0055470:CDS 60.0%
!! GGAGGTGGTGGAAGTGTCAC+CGG + chr1_2:10493552-10493571 Msa0055470:CDS 60.0%
!! GGTGGAAGTGTCACCGGAGA+TGG + chr1_2:10493558-10493577 Msa0055470:CDS 60.0%
GCCGTTCCTGAGCTATTGGC+AGG - chr1_2:10493853-10493872 None:intergenic 60.0%
!! GAGGGTGCTGAACTCGGAGA+TGG - chr1_2:10493889-10493908 None:intergenic 60.0%
TCAGCACCCTCAACTCCCTC+AGG + chr1_2:10493898-10493917 Msa0055470:CDS 60.0%
AGTTATCAAGGGGGGGTGGG+TGG + chr1_2:10494710-10494729 Msa0055470:intron 60.0%
! GGTTGTCGGTGGCTCGGAAA+GGG - chr1_2:10494871-10494890 None:intergenic 60.0%
! TGGTTGTCGGTGGCTCGGAA+AGG - chr1_2:10494872-10494891 None:intergenic 60.0%
!! ATCTCTGGTACGGCTCGGTG+CGG + chr1_2:10495036-10495055 Msa0055470:intron 60.0%
! GAAGATTTGGTCCCTGGCGG+CGG + chr1_2:10495159-10495178 Msa0055470:intron 60.0%
GGGGGCAAGGTAGCTAGAAG+GGG - chr1_2:10496117-10496136 None:intergenic 60.0%
GGGGGGCAAGGTAGCTAGAA+GGG - chr1_2:10496118-10496137 None:intergenic 60.0%
GCAAGGAATCTCCCTAGCCG+AGG - chr1_2:10497555-10497574 None:intergenic 60.0%
CGTTCTCTGCAGCTGCAGCA+AGG - chr1_2:10497572-10497591 None:intergenic 60.0%
CGGCCGAGAAAGAAGAAGGG+AGG + chr1_2:10500540-10500559 Msa0055470:intron 60.0%
GCAGCTATTGACGCTCCGGG+AGG + chr1_2:10489566-10489585 Msa0055470:intron 65.0%
CTGTTGCTGCTGCTGCTCCC+TGG - chr1_2:10490602-10490621 None:intergenic 65.0%
CAGCTACTGGCCAGCCGTCA+GGG + chr1_2:10491129-10491148 Msa0055470:CDS 65.0%
GGATCGCCCCTTCAAGCAGG+TGG + chr1_2:10493221-10493240 Msa0055470:CDS 65.0%
TATCAAGGGGGGGTGGGTGG+TGG + chr1_2:10494713-10494732 Msa0055470:intron 65.0%
GGGGGGGCAAGGTAGCTAGA+AGG - chr1_2:10496119-10496138 None:intergenic 65.0%
GCAGCTACTGGCCAGCCGTC+AGG + chr1_2:10491128-10491147 Msa0055470:CDS 70.0%
CCTTCGGGACCCGCAGCTCT+GGG - chr1_2:10491943-10491962 None:intergenic 70.0%
TCCTTCGGGACCCGCAGCTC+TGG - chr1_2:10491944-10491963 None:intergenic 70.0%
!! TGGTACGGCTCGGTGCGGCT+AGG + chr1_2:10495041-10495060 Msa0055470:intron 70.0%
ACAAGCCACTGCCGCCGCCA+GGG - chr1_2:10495173-10495192 None:intergenic 70.0%
TACAAGCCACTGCCGCCGCC+AGG - chr1_2:10495174-10495193 None:intergenic 70.0%
CCCAGAGCTGCGGGTCCCGA+AGG + chr1_2:10491940-10491959 Msa0055470:CDS 75.0%
TTGGTCCCTGGCGGCGGCAG+TGG + chr1_2:10495165-10495184 Msa0055470:intron 75.0%
Chromosome Type Strat End Strand Name
chr1_2 gene 10488727 10502341 10488727 ID=Msa0055470;Name=Msa0055470
chr1_2 mRNA 10488727 10502341 10488727 ID=Msa0055470-mRNA-1;Parent=Msa0055470;Name=Msa0055470-mRNA-1;_AED=0.07;_eAED=0.07;_QI=188|1|1|1|1|1|18|283|904
chr1_2 exon 10488727 10488946 10488727 ID=Msa0055470-mRNA-1:exon:3988;Parent=Msa0055470-mRNA-1
chr1_2 exon 10489376 10489473 10489376 ID=Msa0055470-mRNA-1:exon:3989;Parent=Msa0055470-mRNA-1
chr1_2 exon 10489570 10489679 10489570 ID=Msa0055470-mRNA-1:exon:3990;Parent=Msa0055470-mRNA-1
chr1_2 exon 10490583 10490978 10490583 ID=Msa0055470-mRNA-1:exon:3991;Parent=Msa0055470-mRNA-1
chr1_2 exon 10491071 10491150 10491071 ID=Msa0055470-mRNA-1:exon:3992;Parent=Msa0055470-mRNA-1
chr1_2 exon 10491746 10491824 10491746 ID=Msa0055470-mRNA-1:exon:3993;Parent=Msa0055470-mRNA-1
chr1_2 exon 10491907 10491982 10491907 ID=Msa0055470-mRNA-1:exon:3994;Parent=Msa0055470-mRNA-1
chr1_2 exon 10492197 10492246 10492197 ID=Msa0055470-mRNA-1:exon:3995;Parent=Msa0055470-mRNA-1
chr1_2 exon 10492972 10493283 10492972 ID=Msa0055470-mRNA-1:exon:3996;Parent=Msa0055470-mRNA-1
chr1_2 exon 10493411 10493614 10493411 ID=Msa0055470-mRNA-1:exon:3997;Parent=Msa0055470-mRNA-1
chr1_2 exon 10493796 10494047 10493796 ID=Msa0055470-mRNA-1:exon:3998;Parent=Msa0055470-mRNA-1
chr1_2 exon 10494134 10494275 10494134 ID=Msa0055470-mRNA-1:exon:3999;Parent=Msa0055470-mRNA-1
chr1_2 exon 10496338 10496447 10496338 ID=Msa0055470-mRNA-1:exon:4000;Parent=Msa0055470-mRNA-1
chr1_2 exon 10496629 10496778 10496629 ID=Msa0055470-mRNA-1:exon:4001;Parent=Msa0055470-mRNA-1
chr1_2 exon 10497260 10497415 10497260 ID=Msa0055470-mRNA-1:exon:4002;Parent=Msa0055470-mRNA-1
chr1_2 exon 10497525 10497641 10497525 ID=Msa0055470-mRNA-1:exon:4003;Parent=Msa0055470-mRNA-1
chr1_2 exon 10501419 10501625 10501419 ID=Msa0055470-mRNA-1:exon:4004;Parent=Msa0055470-mRNA-1
chr1_2 exon 10501915 10502341 10501915 ID=Msa0055470-mRNA-1:exon:4005;Parent=Msa0055470-mRNA-1
chr1_2 five_prime_UTR 10488727 10488914 10488727 ID=Msa0055470-mRNA-1:five_prime_utr;Parent=Msa0055470-mRNA-1
chr1_2 CDS 10488915 10488946 10488915 ID=Msa0055470-mRNA-1:cds;Parent=Msa0055470-mRNA-1
chr1_2 CDS 10489376 10489473 10489376 ID=Msa0055470-mRNA-1:cds;Parent=Msa0055470-mRNA-1
chr1_2 CDS 10489570 10489679 10489570 ID=Msa0055470-mRNA-1:cds;Parent=Msa0055470-mRNA-1
chr1_2 CDS 10490583 10490978 10490583 ID=Msa0055470-mRNA-1:cds;Parent=Msa0055470-mRNA-1
chr1_2 CDS 10491071 10491150 10491071 ID=Msa0055470-mRNA-1:cds;Parent=Msa0055470-mRNA-1
chr1_2 CDS 10491746 10491824 10491746 ID=Msa0055470-mRNA-1:cds;Parent=Msa0055470-mRNA-1
chr1_2 CDS 10491907 10491982 10491907 ID=Msa0055470-mRNA-1:cds;Parent=Msa0055470-mRNA-1
chr1_2 CDS 10492197 10492246 10492197 ID=Msa0055470-mRNA-1:cds;Parent=Msa0055470-mRNA-1
chr1_2 CDS 10492972 10493283 10492972 ID=Msa0055470-mRNA-1:cds;Parent=Msa0055470-mRNA-1
chr1_2 CDS 10493411 10493614 10493411 ID=Msa0055470-mRNA-1:cds;Parent=Msa0055470-mRNA-1
chr1_2 CDS 10493796 10494047 10493796 ID=Msa0055470-mRNA-1:cds;Parent=Msa0055470-mRNA-1
chr1_2 CDS 10494134 10494275 10494134 ID=Msa0055470-mRNA-1:cds;Parent=Msa0055470-mRNA-1
chr1_2 CDS 10496338 10496447 10496338 ID=Msa0055470-mRNA-1:cds;Parent=Msa0055470-mRNA-1
chr1_2 CDS 10496629 10496778 10496629 ID=Msa0055470-mRNA-1:cds;Parent=Msa0055470-mRNA-1
chr1_2 CDS 10497260 10497415 10497260 ID=Msa0055470-mRNA-1:cds;Parent=Msa0055470-mRNA-1
chr1_2 CDS 10497525 10497641 10497525 ID=Msa0055470-mRNA-1:cds;Parent=Msa0055470-mRNA-1
chr1_2 CDS 10501419 10501625 10501419 ID=Msa0055470-mRNA-1:cds;Parent=Msa0055470-mRNA-1
chr1_2 CDS 10501915 10502058 10501915 ID=Msa0055470-mRNA-1:cds;Parent=Msa0055470-mRNA-1
chr1_2 three_prime_UTR 10502059 10502341 10502059 ID=Msa0055470-mRNA-1:three_prime_utr;Parent=Msa0055470-mRNA-1
Gene Sequence

>Msa0055470

ATGTCTCAGACTAACTGGGAGGCTGATAAGATGTTGGATGTTTACATCCATGATTACCTTGTGAAGAGGGATTTGAAAGCTTCTGCTCAGGCTTTTCAAGCTGAAGGGAAAGTGTCTTCTGATCCTGTTGCTATTGACGCTCCGGGAGGATTTTTGTTCGAGTGGTGGTCGGTTTTCTGGGACATATTCATTGCCAGGACGAACGAGAAGCATTCGGAAGTTGCCGCGTCTTATATCGAGACTCAGTTAATTAAGGCCAGGGAGCAGCAGCAGCAACAGCAGCAGCAGCCACAACCTCAGCAATCACCACATCAACAGCAGCAGCAGCAACAACAACATCAGATGCAGATGCAACATATGCTGTTACAGAGGCAACACCAGCAGCAACAGCAGCAACAGCAACAACAGCAACAACAGCAACAGCAGCAGCAGCAGCCGCAACATCAGCAGCAACAACAGCAACAGCAACAGCAACAGCAACAACAGGGTAGGGATAGGGCTCATCTCTTGAATGGTGGTGGTGCAAATGGATTAGTTGGAAACCCTAGCACTGCAAATGCTATAGCAACAAAGATGTATGAGGAAAGGTTAAAACTTCCCCTTCAAAGGGATTCTTTGGAAGATGCTGCAATGAAGCAAAGATTTGGAGACCAACTCTTGGATCCAAATCATGCTTCAATACTGAAGTCTTCTGCAGCTACTGGCCAGCCGTCAGGGCAAGTTTTGCATGGTGCTGCTGGTGCGATGTCTCCACAAGTTCAAGCTCGTAGTCAGCAACTACCAGGGTCTACTCCGGATATAAAAACTGAGATCAATCCTGTATTGAATCCCAGAGCTGCGGGTCCCGAAGGATCATTGATGGCAATTCCTGGATCAAATCAAGGTGGCAACAATTTGACTCTGAAAGGGTGGCCACTCACAGGTTTGGATCAACTTCGTTCTGGTTTACTCCAGCAACAAAAACCTTTCATACAAAGTCCACAGCCTTTTCATCAACTTCCAATGTTGACACAACAACATCAGCAACAACTTATGTTAGCTCAGCAGAACCTGGCATCACCTTCTGCCAGTGATGATAGTAGAAGACTCAGAATGCTACTGAATACTCGAAATATGGGCGTAGGTAAGGATGGCCTTTCAAATCCTGTTGGTGATGTTGTATCAAATGTTGGATCGCCCCTTCAAGCAGGTGGTCCTCCATTTCCTCGTGGGGATACAGATATGCTAATGAAGTTGAAACTTGCTCAGTTACAACATCAACAACAGCAGAATGCCAATCCACAACAGCAGCAACTTCAACAACAGCATTCTCTTTCAAATCAGCAATCTCAGTCTGCAAATCATAACATGCATCAGCAAGATAATAAAGTAGGGGGAGGTGGTGGAAGTGTCACCGGAGATGGTAGCATGTCAAACTCCTTTAGAGGAAATGATCAGGTTTCCAAAAGCCAGCCTGGAAGAAAGAGAAAGCAGCCTGTATCTTCTTCTGGTCCTGCCAATAGCTCAGGAACGGCGAATACAGCAGGACCATCTCCGAGTTCAGCACCCTCAACTCCCTCAGGCTCAACTCATACGCCTGGTGATGTGATATCAATGCCTTCTTTACCTCATAATGGTAGTTCTTCTAAGCCATTAATGATGTTTAGCACTGATGGCACCGGAACTCTTACCTCACCTTCAAACCAATTGTGGGATGATAAGGATATTGAATTGCAGGCAGATGTGGACCGCTTTGTAGAGGACGGATCTCTCGATGACAATGTTGAGTCTTTTTTATCGCATGATGATACAGACCCTAGAGATCCAGTTGGACGTATGGATGTAAGCAAAGGTTTCACATTTTCTGAAGTAAATTCGGTTCGTGCAAGCACAAATAAAGTTGTTTGTAGCCATTTCTCATCCGACGGAAAATTGCTTGCAAGTGGTGGTCATGACAAAAAGGTTGTTTTATGGTACACAGATTCTCTAAAGCAGAAAGCTACTCTTGAAGAACATTCACTTTTAATCACTGATGTCCGTTTCAGTCCAAGCATGCCTCGTCTTGCAACATCTTCATATGACAAAACTGTCCGGGTTTGGGATGTTGACAATCCTGGGTATTCGCTTCGTACCTTCACTGGGCATTCTGCAGCTGTTATGTCACTAGACTTTCATCCTAATAAAGATGACCTTATCTGCTCTTGTGATTGTGATGGAGAGATAAGATATTGGAGTATTAACAATGGCAGTTGTGCTAGAGTGTCAAAGGGTGGCATGGCACAGATGAGATTTCAACCTCGGCTAGGGAGATTCCTTGCTGCAGCTGCAGAGAACGTTGTCTCTATACTTGATGTTGAGACACAAGCATGCCGATATTCTCTAAAGGGTCACACAAAGTCAATACATTCTGTTTGTTGGGATCCTTCTGGAGAGTTCCTGGCATCTGTCAGTGAGGACTCTGTCAGGGTTTGGACTCTTGGATCCGGGAGTGAAGGGGAATGTGTTCATGAGCTTAGCTGTAATGGAAATAAATTTCACTCGTGCGTTTTCCATCCAACGTATTCTTCACTGTTGGTCATTGGCTGTTACCAGTCATTGGAGCTGTGGAACATGACCGAGAACAAGACGATGACTCTGTCTGCTCACGACGGTCTTATTGCTGCACTGGCCGTTTCAACTGTAAACGGTTTGGTTGCTTCTGCCAGTCATGACAGGTTTGTCAAGCTCTGGAAGTGA
Protein sequence

>Msa0055470

MSQTNWEADKMLDVYIHDYLVKRDLKASAQAFQAEGKVSSDPVAIDAPGGFLFEWWSVFWDIFIARTNEKHSEVAASYIETQLIKAREQQQQQQQQPQPQQSPHQQQQQQQQHQMQMQHMLLQRQHQQQQQQQQQQQQQQQQQQQPQHQQQQQQQQQQQQQQGRDRAHLLNGGGANGLVGNPSTANAIATKMYEERLKLPLQRDSLEDAAMKQRFGDQLLDPNHASILKSSAATGQPSGQVLHGAAGAMSPQVQARSQQLPGSTPDIKTEINPVLNPRAAGPEGSLMAIPGSNQGGNNLTLKGWPLTGLDQLRSGLLQQQKPFIQSPQPFHQLPMLTQQHQQQLMLAQQNLASPSASDDSRRLRMLLNTRNMGVGKDGLSNPVGDVVSNVGSPLQAGGPPFPRGDTDMLMKLKLAQLQHQQQQNANPQQQQLQQQHSLSNQQSQSANHNMHQQDNKVGGGGGSVTGDGSMSNSFRGNDQVSKSQPGRKRKQPVSSSGPANSSGTANTAGPSPSSAPSTPSGSTHTPGDVISMPSLPHNGSSSKPLMMFSTDGTGTLTSPSNQLWDDKDIELQADVDRFVEDGSLDDNVESFLSHDDTDPRDPVGRMDVSKGFTFSEVNSVRASTNKVVCSHFSSDGKLLASGGHDKKVVLWYTDSLKQKATLEEHSLLITDVRFSPSMPRLATSSYDKTVRVWDVDNPGYSLRTFTGHSAAVMSLDFHPNKDDLICSCDCDGEIRYWSINNGSCARVSKGGMAQMRFQPRLGRFLAAAAENVVSILDVETQACRYSLKGHTKSIHSVCWDPSGEFLASVSEDSVRVWTLGSGSEGECVHELSCNGNKFHSCVFHPTYSSLLVIGCYQSLELWNMTENKTMTLSAHDGLIAALAVSTVNGLVASASHDRFVKLWK*