AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0055780

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0055780 MtrunA17_Chr3g0088371 83.152 184 28 1 618 798 1 184 8.76e-103 315
Msa0055780 MtrunA17_Chr2g0324011 30.709 635 364 12 36 665 8 571 3.05e-101 325
Msa0055780 MtrunA17_Chr3g0082121 31.693 691 384 17 41 727 49 655 1.43e-100 326
Msa0055780 MtrunA17_Chr1g0202341 29.606 635 366 17 34 662 50 609 6.25e-80 271
Msa0055780 MtrunA17_Chr8g0363841 28.776 629 375 13 40 665 22 580 5.12e-75 257
Msa0055780 MtrunA17_Chr1g0203721 26.026 780 452 20 1 739 16 711 5.73e-73 256
Msa0055780 MtrunA17_Chr2g0296781 27.688 679 405 20 39 708 1 602 1.71e-68 240
Msa0055780 MtrunA17_Chr5g0448761 25.318 707 449 14 31 728 56 692 2.00e-68 241
Msa0055780 MtrunA17_Chr6g0458391 26.984 630 357 15 41 662 231 765 1.99e-65 233
Msa0055780 MtrunA17_Chr6g0477261 29.412 527 314 14 180 699 7 482 5.96e-65 229
Msa0055780 MtrunA17_Chr1g0164591 35.312 320 192 4 131 448 1 307 9.32e-63 214
Msa0055780 MtrunA17_Chr2g0287651 25.755 629 387 13 39 662 79 632 1.05e-60 221
Msa0055780 MtrunA17_Chr5g0441581 24.967 757 460 21 32 773 26 689 3.46e-59 214
Msa0055780 MtrunA17_Chr5g0440451 24.294 708 429 16 34 721 42 662 1.06e-55 207
Msa0055780 MtrunA17_Chr1g0172971 82.051 117 20 1 1 116 1 117 4.01e-54 196
Msa0055780 MtrunA17_Chr1g0207551 24.821 697 430 17 31 718 30 641 4.09e-54 201
Msa0055780 MtrunA17_Chr7g0258861 35.948 306 172 6 36 336 8 294 4.69e-54 189
Msa0055780 MtrunA17_Chr2g0329031 25.776 644 382 18 23 658 2 557 1.65e-53 198
Msa0055780 MtrunA17_Chr1g0198761 27.147 652 379 19 26 660 38 610 4.72e-53 197
Msa0055780 MtrunA17_Chr1g0196541 24.880 627 397 16 39 662 1 556 2.73e-52 194
Msa0055780 MtrunA17_Chr3g0118611 27.634 503 304 10 221 719 111 557 3.04e-52 195
Msa0055780 MtrunA17_Chr3g0080351 23.724 725 449 15 34 752 75 701 1.13e-48 185
Msa0055780 MtrunA17_Chr2g0287061 24.066 669 377 19 41 694 189 741 5.12e-48 182
Msa0055780 MtrunA17_Chr2g0290391 26.012 642 372 19 38 660 54 611 2.58e-47 179
Msa0055780 MtrunA17_Chr1g0203051 22.373 590 389 8 50 637 94 616 8.43e-47 177
Msa0055780 MtrunA17_Chr2g0276841 25.984 635 374 21 49 669 84 636 3.91e-45 173
Msa0055780 MtrunA17_Chr5g0448511 25.664 452 282 10 216 665 1 400 4.04e-44 167
Msa0055780 MtrunA17_Chr5g0431001 28.160 451 279 12 40 473 66 488 2.44e-42 161
Msa0055780 MtrunA17_Chr2g0291591 25.956 497 316 13 16 499 44 501 6.93e-42 161
Msa0055780 MtrunA17_Chr2g0291581 23.923 627 396 14 38 662 74 621 6.71e-41 160
Msa0055780 MtrunA17_Chr6g0475591 91.781 73 6 0 188 260 1 73 1.35e-40 143
Msa0055780 MtrunA17_Chr2g0294841 26.640 503 316 15 3 482 7 479 1.73e-35 144
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0055780 AT4G38180.1 27.925 641 382 14 32 665 70 637 1.55e-70 248
Msa0055780 AT4G15090.1 25.000 696 435 15 50 741 66 678 2.07e-59 217
Msa0055780 AT4G15090.5 25.000 696 435 15 50 741 66 678 2.07e-59 217
Msa0055780 AT4G15090.3 25.000 696 435 15 50 741 66 678 2.07e-59 217
Msa0055780 AT4G15090.2 25.000 696 435 15 50 741 66 678 2.07e-59 217
Msa0055780 AT4G15090.4 25.000 696 435 15 50 741 66 678 2.07e-59 217
Msa0055780 AT2G27110.2 25.070 714 423 19 10 719 29 634 1.09e-53 200
Msa0055780 AT2G27110.1 25.070 714 423 19 10 719 29 634 1.09e-53 200
Msa0055780 AT2G27110.3 27.308 509 313 11 213 719 36 489 4.79e-53 197
Msa0055780 AT3G06250.2 25.118 633 351 16 34 661 189 703 5.24e-52 194
Msa0055780 AT3G06250.1 25.118 633 351 16 34 661 189 703 5.24e-52 194
Msa0055780 AT3G06250.3 25.118 633 351 16 34 661 189 703 5.24e-52 194
Msa0055780 AT1G76320.3 24.815 677 413 19 50 720 12 598 4.74e-50 187
Msa0055780 AT1G76320.2 24.852 676 412 19 50 719 12 597 1.19e-49 187
Msa0055780 AT1G76320.1 24.852 676 412 19 50 719 12 597 1.52e-49 187
Msa0055780 AT1G76320.4 24.852 676 412 19 50 719 12 597 1.52e-49 187
Msa0055780 AT3G22170.2 22.466 730 449 17 34 753 69 691 1.37e-47 182
Msa0055780 AT3G22170.1 22.466 730 449 17 34 753 69 691 1.37e-47 182
Msa0055780 AT5G18960.2 24.730 647 359 18 24 661 200 727 2.75e-46 178
Msa0055780 AT5G18960.1 24.730 647 359 18 24 661 200 727 2.75e-46 178
Msa0055780 AT4G38170.1 24.532 481 295 13 235 703 24 448 8.24e-44 167
Msa0055780 AT1G10240.2 24.719 623 377 19 49 659 62 604 8.82e-42 163
Msa0055780 AT1G10240.1 24.719 623 377 19 49 659 62 604 8.82e-42 163
Msa0055780 AT5G28530.1 24.100 639 388 17 40 660 60 619 1.31e-41 162
Msa0055780 AT5G28530.3 23.944 639 385 18 40 660 60 615 7.95e-41 160
Msa0055780 AT5G28530.2 23.944 639 385 18 40 660 60 615 7.95e-41 160
Msa0055780 AT2G32250.5 23.624 745 432 20 4 743 10 622 1.12e-39 157
Msa0055780 AT2G32250.2 23.624 745 432 20 4 743 10 622 1.78e-39 157
Msa0055780 AT2G32250.4 23.624 745 432 20 4 743 10 622 1.78e-39 157
Msa0055780 AT2G32250.6 23.624 745 432 20 4 743 10 622 2.54e-39 157
Msa0055780 AT2G32250.1 23.624 745 432 20 4 743 10 622 2.54e-39 157
Msa0055780 AT2G32250.3 23.624 745 432 20 4 743 10 622 2.54e-39 157
Msa0055780 AT2G32250.7 23.588 708 407 18 41 743 3 581 1.14e-38 154
Msa0055780 AT2G32250.8 23.605 699 400 18 50 743 12 581 1.18e-38 154
Msa0055780 AT1G80010.1 23.556 658 370 24 41 662 101 661 3.74e-36 146
Msa0055780 AT1G52520.1 22.080 625 407 16 41 662 91 638 2.37e-33 137
Msa0055780 AT4G19990.1 28.731 268 184 4 219 483 106 369 2.35e-27 119
Msa0055780 AT4G19990.1 35.338 133 72 3 591 721 438 558 2.15e-12 71.2
Msa0055780 AT4G19990.7 28.731 268 184 4 219 483 177 440 2.57e-27 119
Msa0055780 AT4G19990.7 35.338 133 72 3 591 721 509 629 2.49e-12 71.2
Msa0055780 AT4G19990.5 28.731 268 184 4 219 483 163 426 2.63e-27 119
Msa0055780 AT4G19990.5 35.338 133 72 3 591 721 495 615 2.44e-12 71.2
Msa0055780 AT4G19990.3 28.731 268 184 4 219 483 163 426 3.17e-27 119
Msa0055780 AT4G19990.3 35.338 133 72 3 591 721 495 615 2.49e-12 71.2
Msa0055780 AT4G19990.4 28.731 268 184 4 219 483 163 426 3.17e-27 119
Msa0055780 AT4G19990.4 35.338 133 72 3 591 721 495 615 2.49e-12 71.2
Msa0055780 AT4G19990.6 28.731 268 184 4 219 483 163 426 3.34e-27 119
Msa0055780 AT4G19990.6 35.338 133 72 3 591 721 495 615 2.21e-12 71.2
Msa0055780 AT4G19990.2 28.731 268 184 4 219 483 163 426 3.34e-27 119
Msa0055780 AT4G19990.2 35.338 133 72 3 591 721 495 615 2.21e-12 71.2
Msa0055780 AT5G28530.4 21.781 629 352 20 40 660 60 556 1.39e-22 103
Msa0055780 AT5G28530.5 21.622 629 349 21 40 660 60 552 9.74e-22 100

Find 123 sgRNAs with CRISPR-Local

Find 175 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCATGCTGAGTTGGACTTTA+AGG 0.133287 1_2:+11044294 Msa0055780:CDS
TTTCGATGAGTTAACTAATT+TGG 0.156761 1_2:+11043985 Msa0055780:CDS
AGTCGCTTCTTTGACCTAAT+TGG 0.186128 1_2:-11045120 None:intergenic
CTTTAGTCATTTCAACATTA+TGG 0.194287 1_2:+11044252 Msa0055780:CDS
CAACAAGATTATGCTCTATT+TGG 0.198611 1_2:+11043201 Msa0055780:CDS
TTCATTTCAGCTGCCTTTCT+TGG 0.201003 1_2:+11043704 Msa0055780:intron
CATCGTAAGAGTGTGTTATT+TGG 0.276792 1_2:+11043737 Msa0055780:CDS
TATGGTTTGAGGTTTCTTAT+TGG 0.280533 1_2:-11043831 None:intergenic
TTCTTTGACCTAATTGGATT+TGG 0.299426 1_2:-11045114 None:intergenic
AATCAGATTTCGACTACAAT+TGG 0.318540 1_2:+11044026 Msa0055780:CDS
TGTTCTTGAGGCAGGGAAAA+AGG 0.322946 1_2:+11044966 Msa0055780:CDS
ACCAGCCTGGTCTGTGTATA+TGG 0.341000 1_2:-11043849 None:intergenic
GCCGATATTTATTGTTTGTT+CGG 0.341758 1_2:-11043251 None:intergenic
TTGGTTTGAATATTATCTTC+TGG 0.345646 1_2:+11045363 Msa0055780:three_prime_UTR
TTTGCTTCTTCCGAGCTATA+AGG 0.345757 1_2:-11045182 None:intergenic
GGTTTCGAATGTTGATGTTT+TGG 0.354913 1_2:+11044549 Msa0055780:CDS
TATGCATTGGTCTTCAGTTT+GGG 0.370760 1_2:+11044126 Msa0055780:CDS
CTCAACGGTGTTCTTGAGGC+AGG 0.386173 1_2:+11044958 Msa0055780:CDS
AACAATAAATATCGGCCATT+AGG 0.388497 1_2:+11043258 Msa0055780:CDS
ACCGAACAAACAATAAATAT+CGG 0.389395 1_2:+11043250 Msa0055780:CDS
TTTCAATTTATCATATCTAA+TGG 0.390380 1_2:+11042338 None:intergenic
GTATGCATTGGTCTTCAGTT+TGG 0.392120 1_2:+11044125 Msa0055780:CDS
GTCTTTAGTGCCAACATTCA+TGG 0.395146 1_2:-11044842 None:intergenic
TTCTCATACTCAACAAGAAC+TGG 0.395633 1_2:-11042721 None:intergenic
AAGAAAGACCAAATCCAATT+AGG 0.397771 1_2:+11045106 Msa0055780:CDS
TTTGGTCTTTCTTTGAACTT+TGG 0.398856 1_2:-11045096 None:intergenic
TTCCTTCAAATACTATTATG+AGG 0.399583 1_2:+11044426 Msa0055780:CDS
GAGGAGTTTCTTATTTCTAA+AGG 0.403538 1_2:+11044991 Msa0055780:CDS
TAAAGAATCATGGAAGTCTT+TGG 0.408500 1_2:+11042492 Msa0055780:CDS
CATGTCGTATGTTTGAGAAC+CGG 0.411671 1_2:+11044674 Msa0055780:CDS
GATTATGATCTTCAAACCTT+GGG 0.413114 1_2:-11044597 None:intergenic
ATAACACTGGATTCTCTGTT+AGG 0.417808 1_2:+11042563 Msa0055780:CDS
CGATTATGATCTTCAAACCT+TGG 0.425681 1_2:-11044598 None:intergenic
CGAGAAGTAAATGAAGTTCA+AGG 0.430014 1_2:+11042898 Msa0055780:CDS
AGCTGGAATATATTTGAAGT+TGG 0.433136 1_2:+11042780 Msa0055780:CDS
TGGTCTGTGTATATGGTTTG+AGG 0.447350 1_2:-11043842 None:intergenic
GAAAGGGTTGGTTGTAAAGC+TGG 0.447509 1_2:+11042763 Msa0055780:CDS
CGCTTTAAAACATATTGTGC+AGG 0.447633 1_2:-11044775 None:intergenic
CGTTATGTTTGTAACAAAGA+AGG 0.449439 1_2:+11042646 Msa0055780:CDS
GCTTTAATAAATTCTAAAGC+TGG 0.450264 1_2:+11042928 Msa0055780:CDS
ATCTGAGAGTGGACAATTGA+CGG 0.452529 1_2:+11042417 Msa0055780:CDS
TGGTCTTTGCTCATGGCACA+TGG 0.452802 1_2:+11043916 Msa0055780:CDS
GGCCTACTTCGGACTTTAAG+TGG 0.458978 1_2:+11044080 Msa0055780:CDS
ATGTCGTATGTTTGAGAACC+GGG 0.461344 1_2:+11044675 Msa0055780:CDS
AATTCTTGATTGTTATGCAT+TGG 0.467731 1_2:+11045344 Msa0055780:three_prime_UTR
ACAAAATAAGAAATCGGATA+AGG 0.469178 1_2:+11042612 Msa0055780:CDS
GGGTTGTCACAGTCGACATT+GGG 0.480993 1_2:+11044632 Msa0055780:CDS
GAAGTGATGGGTCAAGGAGT+TGG 0.484292 1_2:+11042973 Msa0055780:CDS
CTCCTCATAATAGTATTTGA+AGG 0.485089 1_2:-11044428 None:intergenic
TTACAACCAACCCTTTCCTC+TGG 0.485330 1_2:-11042757 None:intergenic
TTTAATTATGCATATAACAC+TGG 0.485542 1_2:+11042550 Msa0055780:CDS
CTGTCTGTGAACCATCTGTT+GGG 0.487793 1_2:+11045067 Msa0055780:CDS
TCTAATGACAACTCGTCAAA+AGG 0.488137 1_2:+11043041 Msa0055780:CDS
CTCAAGTAGCACAAATGCTC+TGG 0.489977 1_2:-11042868 None:intergenic
CAATTCACAAAATAAGAAAT+CGG 0.490263 1_2:+11042606 Msa0055780:CDS
TATGAGGAGGACACAACAAA+AGG 0.490908 1_2:+11044442 Msa0055780:CDS
ATGATTGTCAAAACCAAGAA+AGG 0.491378 1_2:-11043717 None:intergenic
ATCAGATTTCGACTACAATT+GGG 0.491708 1_2:+11044027 Msa0055780:CDS
CGTCAAAAGGAGATGGTGGC+TGG 0.492100 1_2:+11043054 Msa0055780:CDS
ACATTATGGTTCAGAGAATG+AGG 0.494022 1_2:+11044266 Msa0055780:CDS
GACCGCATAAGCTGACTGTT+GGG 0.496307 1_2:-11044346 None:intergenic
GAGAACATCTTATGAAGTGA+TGG 0.499875 1_2:+11042960 Msa0055780:CDS
TGTCTTCTGCAGCATCAACT+TGG 0.502977 1_2:-11043146 None:intergenic
GCTGTCTGTGAACCATCTGT+TGG 0.504047 1_2:+11045066 Msa0055780:CDS
AAATGCTCTGGTTTATGTAA+TGG 0.504865 1_2:-11042856 None:intergenic
CTCATTCAAATCGTATGCAT+TGG 0.507227 1_2:+11044113 Msa0055780:CDS
ATCATAATCGACTTGATGAA+AGG 0.507955 1_2:+11044611 Msa0055780:CDS
TTTAAGTCCGAAAATCGAAA+AGG 0.508080 1_2:-11043012 None:intergenic
GAGGGATAATCATGCTGAGT+TGG 0.508852 1_2:+11044285 Msa0055780:CDS
ATTGGTCTTCAGTTTGGGTG+AGG 0.509410 1_2:+11044131 Msa0055780:CDS
TGTCTATAAGATATATAAGT+GGG 0.514682 1_2:+11042816 Msa0055780:CDS
GATCTTCAAACCTTGGGGAA+AGG 0.519004 1_2:-11044591 None:intergenic
TAAAGAATCGAACAAGTGAA+TGG 0.519618 1_2:-11044234 None:intergenic
TAACAAAGAAGGTTTCAAGA+AGG 0.525236 1_2:+11042657 Msa0055780:CDS
TCATAATCGACTTGATGAAA+GGG 0.526860 1_2:+11044612 Msa0055780:CDS
CATAATAGTATTTGAAGGAA+AGG 0.529686 1_2:-11044423 None:intergenic
GACAGAAATTCCTTATAGCT+CGG 0.533906 1_2:+11045172 Msa0055780:CDS
AGGGTTGTCACAGTCGACAT+TGG 0.538587 1_2:+11044631 Msa0055780:CDS
AATCGAACAAGTGAATGGTC+TGG 0.540971 1_2:-11044229 None:intergenic
ATGAGGAGGACACAACAAAA+GGG 0.542065 1_2:+11044443 Msa0055780:CDS
AACAAAGAAGGTTTCAAGAA+GGG 0.545537 1_2:+11042658 Msa0055780:CDS
CATTTAGTGATAAAGAATCA+TGG 0.546005 1_2:+11042482 Msa0055780:CDS
ACTTCAACAACGCACCAGCC+TGG 0.557139 1_2:-11043862 None:intergenic
CTGAAATCCACCATGAATGT+TGG 0.557140 1_2:+11044832 Msa0055780:CDS
AATGAAGCTCTCTCGAAACC+AGG 0.565261 1_2:+11043108 Msa0055780:CDS
TGAAAATTCAGTTATTGATG+CGG 0.565546 1_2:+11042441 Msa0055780:CDS
GTGATGGGTCAAGGAGTTGG+AGG 0.568802 1_2:+11042976 Msa0055780:CDS
ATGTCTATAAGATATATAAG+TGG 0.572287 1_2:+11042815 Msa0055780:CDS
GGACCGCATAAGCTGACTGT+TGG 0.579264 1_2:-11044347 None:intergenic
TTTGGTGCAGTCCCAACAGA+TGG 0.581566 1_2:-11045078 None:intergenic
GAAGCAAAAGAAAGATGATG+AGG 0.585686 1_2:+11045197 Msa0055780:CDS
TGGTGTATACTTGTTTACTA+CGG 0.585960 1_2:-11044368 None:intergenic
GAGGCTTTAACAAATTAAGC+GGG 0.587718 1_2:+11045216 Msa0055780:exon
ATATTAACTTCATCTGAGAG+TGG 0.588105 1_2:+11042406 Msa0055780:CDS
ACGTGTTTGCGCAGATGCAG+AGG 0.588731 1_2:+11044921 Msa0055780:CDS
TCTTATGAAGTGATGGGTCA+AGG 0.589029 1_2:+11042967 Msa0055780:CDS
TCAACGGTGTTCTTGAGGCA+GGG 0.590097 1_2:+11044959 Msa0055780:CDS
ACCATATACACAGACCAGGC+TGG 0.590176 1_2:+11043848 Msa0055780:CDS
ATTTCTCAACGGTGTTCTTG+AGG 0.591378 1_2:+11044954 Msa0055780:CDS
TTGAAGAAAACCTTTCCCCA+AGG 0.594796 1_2:+11044581 Msa0055780:CDS
TGAAGACTTAGAAGGCGTAA+CGG 0.598405 1_2:-11045034 None:intergenic
GACAACTCGTCAAAAGGAGA+TGG 0.599038 1_2:+11043047 Msa0055780:CDS
AGAACATCTTATGAAGTGAT+GGG 0.601988 1_2:+11042961 Msa0055780:CDS
AACTCGTCAAAAGGAGATGG+TGG 0.603142 1_2:+11043050 Msa0055780:CDS
ATCCCAACAGTCAGCTTATG+CGG 0.606153 1_2:+11044344 Msa0055780:CDS
CTTCAAATACTATTATGAGG+AGG 0.607664 1_2:+11044429 Msa0055780:CDS
TTGATATCGTTGCGCTTCAG+TGG 0.611060 1_2:-11044866 None:intergenic
AGAACTGGACTGTCACATGT+TGG 0.620791 1_2:-11042706 None:intergenic
AGCCACTTAAAGTCCGAAGT+AGG 0.621799 1_2:-11044082 None:intergenic
GGGTCAAGGAGTTGGAGGCA+CGG 0.621882 1_2:+11042981 Msa0055780:CDS
TGAGGCTTTAACAAATTAAG+CGG 0.628414 1_2:+11045215 Msa0055780:exon
ATTATGATCTTCAAACCTTG+GGG 0.630358 1_2:-11044596 None:intergenic
GGTCTTTGCTCATGGCACAT+GGG 0.639768 1_2:+11043917 Msa0055780:CDS
TTTAGTGCCAACATTCATGG+TGG 0.641441 1_2:-11044839 None:intergenic
CATTATGGTTCAGAGAATGA+GGG 0.643278 1_2:+11044267 Msa0055780:CDS
GATTTCAGCTTATCGACAGA+CGG 0.644926 1_2:-11044817 None:intergenic
TGAATAAATGAAAAGCAAGA+TGG 0.655697 1_2:-11044388 None:intergenic
CATGTCGACATAAGAAACCC+CGG 0.663279 1_2:-11044693 None:intergenic
TCAAACCATATACACAGACC+AGG 0.671057 1_2:+11043844 Msa0055780:CDS
TGTCGTATGTTTGAGAACCG+GGG 0.673760 1_2:+11044676 Msa0055780:CDS
GCATCTGAAATATTTCTCAA+CGG 0.675753 1_2:+11044943 Msa0055780:CDS
ATGTTGATAATGATAATGAG+AGG 0.683310 1_2:+11044527 Msa0055780:CDS
TGTTGATAATGATAATGAGA+GGG 0.689129 1_2:+11044528 Msa0055780:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TGTTTTTTATGTTATAAGTT+AGG + chr1_2:11045246-11045265 Msa0055780:three_prime_UTR 15.0%
!! TTTAATTATGCATATAACAC+TGG + chr1_2:11042550-11042569 Msa0055780:CDS 20.0%
!! CAATTCACAAAATAAGAAAT+CGG + chr1_2:11042606-11042625 Msa0055780:CDS 20.0%
!! ATGTCTATAAGATATATAAG+TGG + chr1_2:11042815-11042834 Msa0055780:CDS 20.0%
!! TGTCTATAAGATATATAAGT+GGG + chr1_2:11042816-11042835 Msa0055780:CDS 20.0%
!!! TGAATGTTTATATTGATTGA+AGG + chr1_2:11043405-11043424 Msa0055780:intron 20.0%
!!! AATTTAATGTTCTGGTTTAT+GGG + chr1_2:11043433-11043452 Msa0055780:intron 20.0%
!!! ATGATGAAAAACTGTTTTAA+TGG + chr1_2:11044055-11044074 Msa0055780:CDS 20.0%
! TGAAAATTCAGTTATTGATG+CGG + chr1_2:11042441-11042460 Msa0055780:CDS 25.0%
! CATTTAGTGATAAAGAATCA+TGG + chr1_2:11042482-11042501 Msa0055780:CDS 25.0%
!!! CTTATTTTGTGAATTGTTCT+TGG - chr1_2:11042602-11042621 None:intergenic 25.0%
! ACAAAATAAGAAATCGGATA+AGG + chr1_2:11042612-11042631 Msa0055780:CDS 25.0%
!!! GCTTTAATAAATTCTAAAGC+TGG + chr1_2:11042928-11042947 Msa0055780:CDS 25.0%
! ACCGAACAAACAATAAATAT+CGG + chr1_2:11043250-11043269 Msa0055780:CDS 25.0%
! AGTACAAATTACTAACCTAA+TGG - chr1_2:11043276-11043295 None:intergenic 25.0%
! TGAAATTTGAATGAATGTTC+TGG + chr1_2:11043323-11043342 Msa0055780:intron 25.0%
!! AGGTTTAGAATTTAATGTTC+TGG + chr1_2:11043425-11043444 Msa0055780:intron 25.0%
!!! GAATTTAATGTTCTGGTTTA+TGG + chr1_2:11043432-11043451 Msa0055780:intron 25.0%
!! TGTTGTATTTTGTTCTGATT+TGG + chr1_2:11043681-11043700 Msa0055780:intron 25.0%
! AAAACACCTTGAAAAACATT+CGG - chr1_2:11043893-11043912 None:intergenic 25.0%
! TTTCGATGAGTTAACTAATT+TGG + chr1_2:11043985-11044004 Msa0055780:CDS 25.0%
!!! TGAAAAACTGTTTTAATGGA+AGG + chr1_2:11044059-11044078 Msa0055780:CDS 25.0%
! CTTTAGTCATTTCAACATTA+TGG + chr1_2:11044252-11044271 Msa0055780:CDS 25.0%
! TGAATAAATGAAAAGCAAGA+TGG - chr1_2:11044391-11044410 None:intergenic 25.0%
! CATAATAGTATTTGAAGGAA+AGG - chr1_2:11044426-11044445 None:intergenic 25.0%
! TTCCTTCAAATACTATTATG+AGG + chr1_2:11044426-11044445 Msa0055780:CDS 25.0%
!!! ATGTTGATAATGATAATGAG+AGG + chr1_2:11044527-11044546 Msa0055780:CDS 25.0%
!!! TGTTGATAATGATAATGAGA+GGG + chr1_2:11044528-11044547 Msa0055780:CDS 25.0%
! TGATGCTTTAACTAAAAAAG+CGG + chr1_2:11045277-11045296 Msa0055780:three_prime_UTR 25.0%
! AATTCTTGATTGTTATGCAT+TGG + chr1_2:11045344-11045363 Msa0055780:three_prime_UTR 25.0%
ATATTAACTTCATCTGAGAG+TGG + chr1_2:11042406-11042425 Msa0055780:CDS 30.0%
TAAAGAATCATGGAAGTCTT+TGG + chr1_2:11042492-11042511 Msa0055780:CDS 30.0%
CGTTATGTTTGTAACAAAGA+AGG + chr1_2:11042646-11042665 Msa0055780:CDS 30.0%
TAACAAAGAAGGTTTCAAGA+AGG + chr1_2:11042657-11042676 Msa0055780:CDS 30.0%
AACAAAGAAGGTTTCAAGAA+GGG + chr1_2:11042658-11042677 Msa0055780:CDS 30.0%
TAAAGAAAAACCAGAGGAAA+GGG + chr1_2:11042747-11042766 Msa0055780:CDS 30.0%
! AGCTGGAATATATTTGAAGT+TGG + chr1_2:11042780-11042799 Msa0055780:CDS 30.0%
! AAATGCTCTGGTTTATGTAA+TGG - chr1_2:11042859-11042878 None:intergenic 30.0%
AGAACATCTTATGAAGTGAT+GGG + chr1_2:11042961-11042980 Msa0055780:CDS 30.0%
! GAATCTTCCTTTTCGATTTT+CGG + chr1_2:11043005-11043024 Msa0055780:CDS 30.0%
TTTAAGTCCGAAAATCGAAA+AGG - chr1_2:11043015-11043034 None:intergenic 30.0%
TGGATATCATAGTAAAAACC+TGG - chr1_2:11043129-11043148 None:intergenic 30.0%
!!! AAGACATAGCCAGTATTTTT+TGG + chr1_2:11043163-11043182 Msa0055780:CDS 30.0%
!!! AGACATAGCCAGTATTTTTT+GGG + chr1_2:11043164-11043183 Msa0055780:CDS 30.0%
CAACAAGATTATGCTCTATT+TGG + chr1_2:11043201-11043220 Msa0055780:CDS 30.0%
GCCGATATTTATTGTTTGTT+CGG - chr1_2:11043254-11043273 None:intergenic 30.0%
AACAATAAATATCGGCCATT+AGG + chr1_2:11043258-11043277 Msa0055780:CDS 30.0%
!! ATGTTCTGGTTTAGAATTGA+AGG + chr1_2:11043337-11043356 Msa0055780:intron 30.0%
CTGGTATATGTGTGTTAATT+TGG + chr1_2:11043362-11043381 Msa0055780:intron 30.0%
AAACACATATGATCTTTCCA+TGG - chr1_2:11043496-11043515 None:intergenic 30.0%
TTTCTATTTACACAGCACAA+TGG + chr1_2:11043640-11043659 Msa0055780:intron 30.0%
ATGATTGTCAAAACCAAGAA+AGG - chr1_2:11043720-11043739 None:intergenic 30.0%
! TATGGTTTGAGGTTTCTTAT+TGG - chr1_2:11043834-11043853 None:intergenic 30.0%
! TCAATTCCGAATGTTTTTCA+AGG + chr1_2:11043884-11043903 Msa0055780:CDS 30.0%
!!! GTTTTTCAAGGTGTTTTTCA+TGG + chr1_2:11043896-11043915 Msa0055780:CDS 30.0%
GAGAATGCAAAGAAAAATCT+CGG + chr1_2:11043941-11043960 Msa0055780:CDS 30.0%
AATCAGATTTCGACTACAAT+TGG + chr1_2:11044026-11044045 Msa0055780:CDS 30.0%
ATCAGATTTCGACTACAATT+GGG + chr1_2:11044027-11044046 Msa0055780:CDS 30.0%
TAAAGAATCGAACAAGTGAA+TGG - chr1_2:11044237-11044256 None:intergenic 30.0%
TGGTGTATACTTGTTTACTA+CGG - chr1_2:11044371-11044390 None:intergenic 30.0%
CTCCTCATAATAGTATTTGA+AGG - chr1_2:11044431-11044450 None:intergenic 30.0%
CTTCAAATACTATTATGAGG+AGG + chr1_2:11044429-11044448 Msa0055780:CDS 30.0%
! CAAAGTTTTCACAATTGAGA+AGG + chr1_2:11044486-11044505 Msa0055780:CDS 30.0%
ATTATGATCTTCAAACCTTG+GGG - chr1_2:11044599-11044618 None:intergenic 30.0%
GATTATGATCTTCAAACCTT+GGG - chr1_2:11044600-11044619 None:intergenic 30.0%
!! ATCATAATCGACTTGATGAA+AGG + chr1_2:11044611-11044630 Msa0055780:CDS 30.0%
!! TCATAATCGACTTGATGAAA+GGG + chr1_2:11044612-11044631 Msa0055780:CDS 30.0%
!! TCGACATGTTTTCAAGATTT+TGG + chr1_2:11044708-11044727 Msa0055780:CDS 30.0%
!! ACATGTTTTCAAGATTTTGG+AGG + chr1_2:11044711-11044730 Msa0055780:CDS 30.0%
!!! CTGCACAATATGTTTTAAAG+CGG + chr1_2:11044776-11044795 Msa0055780:CDS 30.0%
! GCATCTGAAATATTTCTCAA+CGG + chr1_2:11044943-11044962 Msa0055780:CDS 30.0%
!! GAGGAGTTTCTTATTTCTAA+AGG + chr1_2:11044991-11045010 Msa0055780:CDS 30.0%
! TTTGGTCTTTCTTTGAACTT+TGG - chr1_2:11045099-11045118 None:intergenic 30.0%
AAGAAAGACCAAATCCAATT+AGG + chr1_2:11045106-11045125 Msa0055780:CDS 30.0%
TTCTTTGACCTAATTGGATT+TGG - chr1_2:11045117-11045136 None:intergenic 30.0%
! TGAGGCTTTAACAAATTAAG+CGG + chr1_2:11045215-11045234 Msa0055780:exon 30.0%
!!! GTGTTTGTTGCTGTTTTCAA+TGG + chr1_2:11042378-11042397 Msa0055780:exon 35.0%
ATAACACTGGATTCTCTGTT+AGG + chr1_2:11042563-11042582 Msa0055780:CDS 35.0%
GTCTGCTTAATCCTAAAAAC+AGG + chr1_2:11042683-11042702 Msa0055780:CDS 35.0%
TTCTCATACTCAACAAGAAC+TGG - chr1_2:11042724-11042743 None:intergenic 35.0%
GAAAGCTAAAGAAAAACCAG+AGG + chr1_2:11042741-11042760 Msa0055780:CDS 35.0%
CTAAAGAAAAACCAGAGGAA+AGG + chr1_2:11042746-11042765 Msa0055780:CDS 35.0%
CGAGAAGTAAATGAAGTTCA+AGG + chr1_2:11042898-11042917 Msa0055780:CDS 35.0%
GAGAACATCTTATGAAGTGA+TGG + chr1_2:11042960-11042979 Msa0055780:CDS 35.0%
TCTAATGACAACTCGTCAAA+AGG + chr1_2:11043041-11043060 Msa0055780:CDS 35.0%
! TGGTTTAGAATTGAAGGTTC+TGG + chr1_2:11043343-11043362 Msa0055780:intron 35.0%
CATAAATTCCAAGGCAAGAT+AGG - chr1_2:11043463-11043482 None:intergenic 35.0%
TGTACAGAGCATAAATTCCA+AGG - chr1_2:11043472-11043491 None:intergenic 35.0%
! CATCGTAAGAGTGTGTTATT+TGG + chr1_2:11043737-11043756 Msa0055780:CDS 35.0%
!!! AGACATCAGCTACTTTTGAT+TGG + chr1_2:11043780-11043799 Msa0055780:CDS 35.0%
! TTTTTCATGGTCTTTGCTCA+TGG + chr1_2:11043909-11043928 Msa0055780:CDS 35.0%
! TTTTAATGGAAGGCCTACTT+CGG + chr1_2:11044069-11044088 Msa0055780:CDS 35.0%
CTCATTCAAATCGTATGCAT+TGG + chr1_2:11044113-11044132 Msa0055780:CDS 35.0%
!! TATGCATTGGTCTTCAGTTT+GGG + chr1_2:11044126-11044145 Msa0055780:CDS 35.0%
! TCTTTCAATGCTTTTCTTCG+TGG + chr1_2:11044196-11044215 Msa0055780:CDS 35.0%
ACATTATGGTTCAGAGAATG+AGG + chr1_2:11044266-11044285 Msa0055780:CDS 35.0%
CATTATGGTTCAGAGAATGA+GGG + chr1_2:11044267-11044286 Msa0055780:CDS 35.0%
! GGTTTCGAATGTTGATGTTT+TGG + chr1_2:11044549-11044568 Msa0055780:CDS 35.0%
CGATTATGATCTTCAAACCT+TGG - chr1_2:11044601-11044620 None:intergenic 35.0%
!! TTCAAGATTTTGGAGGTCTT+AGG + chr1_2:11044718-11044737 Msa0055780:CDS 35.0%
!! CGCTTTAAAACATATTGTGC+AGG - chr1_2:11044778-11044797 None:intergenic 35.0%
!!! CACAATATGTTTTAAAGCGG+TGG + chr1_2:11044779-11044798 Msa0055780:CDS 35.0%
!! ACTGCTTTTGAAGACTTAGA+AGG - chr1_2:11045045-11045064 None:intergenic 35.0%
GACAGAAATTCCTTATAGCT+CGG + chr1_2:11045172-11045191 Msa0055780:CDS 35.0%
GAAGCAAAAGAAAGATGATG+AGG + chr1_2:11045197-11045216 Msa0055780:CDS 35.0%
! GAGGCTTTAACAAATTAAGC+GGG + chr1_2:11045216-11045235 Msa0055780:exon 35.0%
ATCTGAGAGTGGACAATTGA+CGG + chr1_2:11042417-11042436 Msa0055780:CDS 40.0%
!! TCACATGTTGGCCTGTTTTT+AGG - chr1_2:11042697-11042716 None:intergenic 40.0%
!! TCTTATGAAGTGATGGGTCA+AGG + chr1_2:11042967-11042986 Msa0055780:CDS 40.0%
TCCATCTGCCCAAAAAATAC+TGG - chr1_2:11043175-11043194 None:intergenic 40.0%
ATTTATGCTCTGTACAGCCA+TGG + chr1_2:11043476-11043495 Msa0055780:intron 40.0%
TCCAGCTATGCAAAGATCAT+AGG + chr1_2:11043586-11043605 Msa0055780:intron 40.0%
ACCTATGATCTTTGCATAGC+TGG - chr1_2:11043590-11043609 None:intergenic 40.0%
TTCATTTCAGCTGCCTTTCT+TGG + chr1_2:11043704-11043723 Msa0055780:intron 40.0%
TGGTCTGTGTATATGGTTTG+AGG - chr1_2:11043845-11043864 None:intergenic 40.0%
TCAAACCATATACACAGACC+AGG + chr1_2:11043844-11043863 Msa0055780:CDS 40.0%
!! GTATGCATTGGTCTTCAGTT+TGG + chr1_2:11044125-11044144 Msa0055780:CDS 40.0%
AATCGAACAAGTGAATGGTC+TGG - chr1_2:11044232-11044251 None:intergenic 40.0%
! TCATGCTGAGTTGGACTTTA+AGG + chr1_2:11044294-11044313 Msa0055780:CDS 40.0%
TATGAGGAGGACACAACAAA+AGG + chr1_2:11044442-11044461 Msa0055780:CDS 40.0%
ATGAGGAGGACACAACAAAA+GGG + chr1_2:11044443-11044462 Msa0055780:CDS 40.0%
TTGAAGAAAACCTTTCCCCA+AGG + chr1_2:11044581-11044600 Msa0055780:CDS 40.0%
CATGTCGTATGTTTGAGAAC+CGG + chr1_2:11044674-11044693 Msa0055780:CDS 40.0%
ATGTCGTATGTTTGAGAACC+GGG + chr1_2:11044675-11044694 Msa0055780:CDS 40.0%
!! AAGATTTTGGAGGTCTTAGG+TGG + chr1_2:11044721-11044740 Msa0055780:CDS 40.0%
GATTTCAGCTTATCGACAGA+CGG - chr1_2:11044820-11044839 None:intergenic 40.0%
CTGAAATCCACCATGAATGT+TGG + chr1_2:11044832-11044851 Msa0055780:CDS 40.0%
TTTAGTGCCAACATTCATGG+TGG - chr1_2:11044842-11044861 None:intergenic 40.0%
GTCTTTAGTGCCAACATTCA+TGG - chr1_2:11044845-11044864 None:intergenic 40.0%
ATTTCTCAACGGTGTTCTTG+AGG + chr1_2:11044954-11044973 Msa0055780:CDS 40.0%
! TGAAGACTTAGAAGGCGTAA+CGG - chr1_2:11045037-11045056 None:intergenic 40.0%
AGTCGCTTCTTTGACCTAAT+TGG - chr1_2:11045123-11045142 None:intergenic 40.0%
TTTGCTTCTTCCGAGCTATA+AGG - chr1_2:11045185-11045204 None:intergenic 40.0%
AGAACTGGACTGTCACATGT+TGG - chr1_2:11042709-11042728 None:intergenic 45.0%
GAAAAACCAGAGGAAAGGGT+TGG + chr1_2:11042751-11042770 Msa0055780:CDS 45.0%
TTACAACCAACCCTTTCCTC+TGG - chr1_2:11042760-11042779 None:intergenic 45.0%
!! GAAAGGGTTGGTTGTAAAGC+TGG + chr1_2:11042763-11042782 Msa0055780:CDS 45.0%
CTCAAGTAGCACAAATGCTC+TGG - chr1_2:11042871-11042890 None:intergenic 45.0%
GACAACTCGTCAAAAGGAGA+TGG + chr1_2:11043047-11043066 Msa0055780:CDS 45.0%
AACTCGTCAAAAGGAGATGG+TGG + chr1_2:11043050-11043069 Msa0055780:CDS 45.0%
AATGAAGCTCTCTCGAAACC+AGG + chr1_2:11043108-11043127 Msa0055780:CDS 45.0%
TGTCTTCTGCAGCATCAACT+TGG - chr1_2:11043149-11043168 None:intergenic 45.0%
!!! GCCAGTATTTTTTGGGCAGA+TGG + chr1_2:11043171-11043190 Msa0055780:CDS 45.0%
AGCCACTTAAAGTCCGAAGT+AGG - chr1_2:11044085-11044104 None:intergenic 45.0%
!! ATTGGTCTTCAGTTTGGGTG+AGG + chr1_2:11044131-11044150 Msa0055780:CDS 45.0%
! GTGAGGTCACATTTTACAGC+TGG + chr1_2:11044148-11044167 Msa0055780:CDS 45.0%
GAGGGATAATCATGCTGAGT+TGG + chr1_2:11044285-11044304 Msa0055780:CDS 45.0%
ATCCCAACAGTCAGCTTATG+CGG + chr1_2:11044344-11044363 Msa0055780:CDS 45.0%
GATCTTCAAACCTTGGGGAA+AGG - chr1_2:11044594-11044613 None:intergenic 45.0%
TGTCGTATGTTTGAGAACCG+GGG + chr1_2:11044676-11044695 Msa0055780:CDS 45.0%
CATGTCGACATAAGAAACCC+CGG - chr1_2:11044696-11044715 None:intergenic 45.0%
TTGATATCGTTGCGCTTCAG+TGG - chr1_2:11044869-11044888 None:intergenic 45.0%
TGTTCTTGAGGCAGGGAAAA+AGG + chr1_2:11044966-11044985 Msa0055780:CDS 45.0%
CTGTCTGTGAACCATCTGTT+GGG + chr1_2:11045067-11045086 Msa0055780:CDS 45.0%
!! GAAGTGATGGGTCAAGGAGT+TGG + chr1_2:11042973-11042992 Msa0055780:CDS 50.0%
TGGGTGATCCTATCTTGCCT+TGG + chr1_2:11043452-11043471 Msa0055780:intron 50.0%
ACCATATACACAGACCAGGC+TGG + chr1_2:11043848-11043867 Msa0055780:CDS 50.0%
ACCAGCCTGGTCTGTGTATA+TGG - chr1_2:11043852-11043871 None:intergenic 50.0%
TGGTCTTTGCTCATGGCACA+TGG + chr1_2:11043916-11043935 Msa0055780:CDS 50.0%
GGTCTTTGCTCATGGCACAT+GGG + chr1_2:11043917-11043936 Msa0055780:CDS 50.0%
GGCCTACTTCGGACTTTAAG+TGG + chr1_2:11044080-11044099 Msa0055780:CDS 50.0%
GACCGCATAAGCTGACTGTT+GGG - chr1_2:11044349-11044368 None:intergenic 50.0%
AGGGTTGTCACAGTCGACAT+TGG + chr1_2:11044631-11044650 Msa0055780:CDS 50.0%
GGGTTGTCACAGTCGACATT+GGG + chr1_2:11044632-11044651 Msa0055780:CDS 50.0%
TCAACGGTGTTCTTGAGGCA+GGG + chr1_2:11044959-11044978 Msa0055780:CDS 50.0%
GCTGTCTGTGAACCATCTGT+TGG + chr1_2:11045066-11045085 Msa0055780:CDS 50.0%
! TTTGGTGCAGTCCCAACAGA+TGG - chr1_2:11045081-11045100 None:intergenic 50.0%
!! GTGATGGGTCAAGGAGTTGG+AGG + chr1_2:11042976-11042995 Msa0055780:CDS 55.0%
! CGTCAAAAGGAGATGGTGGC+TGG + chr1_2:11043054-11043073 Msa0055780:CDS 55.0%
ACTTCAACAACGCACCAGCC+TGG - chr1_2:11043865-11043884 None:intergenic 55.0%
GGACCGCATAAGCTGACTGT+TGG - chr1_2:11044350-11044369 None:intergenic 55.0%
ACGTGTTTGCGCAGATGCAG+AGG + chr1_2:11044921-11044940 Msa0055780:CDS 55.0%
CTCAACGGTGTTCTTGAGGC+AGG + chr1_2:11044958-11044977 Msa0055780:CDS 55.0%
TGAGGCAGGGAAAAAGGCAG+AGG + chr1_2:11044972-11044991 Msa0055780:CDS 55.0%
GGGTCAAGGAGTTGGAGGCA+CGG + chr1_2:11042981-11043000 Msa0055780:CDS 60.0%
Chromosome Type Strat End Strand Name
chr1_2 gene 11042352 11045385 11042352 ID=Msa0055780;Name=Msa0055780
chr1_2 mRNA 11042352 11045385 11042352 ID=Msa0055780-mRNA-1;Parent=Msa0055780;Name=Msa0055780-mRNA-1;_AED=0.02;_eAED=0.02;_QI=45|1|1|1|1|1|2|152|800
chr1_2 exon 11042352 11043279 11042352 ID=Msa0055780-mRNA-1:exon:4208;Parent=Msa0055780-mRNA-1
chr1_2 exon 11043714 11045385 11043714 ID=Msa0055780-mRNA-1:exon:4209;Parent=Msa0055780-mRNA-1
chr1_2 five_prime_UTR 11042352 11042396 11042352 ID=Msa0055780-mRNA-1:five_prime_utr;Parent=Msa0055780-mRNA-1
chr1_2 CDS 11042397 11043279 11042397 ID=Msa0055780-mRNA-1:cds;Parent=Msa0055780-mRNA-1
chr1_2 CDS 11043714 11045233 11043714 ID=Msa0055780-mRNA-1:cds;Parent=Msa0055780-mRNA-1
chr1_2 three_prime_UTR 11045234 11045385 11045234 ID=Msa0055780-mRNA-1:three_prime_utr;Parent=Msa0055780-mRNA-1
Gene Sequence

>Msa0055780

ATGGATTTGATATTAACTTCATCTGAGAGTGGACAATTGACGGTTGAAAATTCAGTTATTGATGCGGATAGTTCTCAATGTTACTCATTTAGTGATAAAGAATCATGGAAGTCTTTGGTCTTTAAATCTATAAAAGAGATTGAAGATTTTTATTTTAATTATGCATATAACACTGGATTCTCTGTTAGGAGTATGTTGAAGTCCAAGAACAATTCACAAAATAAGAAATCGGATAAGGTACATTATGTGCGTTATGTTTGTAACAAAGAAGGTTTCAAGAAGGGAAGTCTGCTTAATCCTAAAAACAGGCCAACATGTGACAGTCCAGTTCTTGTTGAGTATGAGAAAGCTAAAGAAAAACCAGAGGAAAGGGTTGGTTGTAAAGCTGGAATATATTTGAAGTTGGATGAAGCGTTGAATGTCTATAAGATATATAAGTGGGAAGTTGATCACTGTCATCCATTACATAAACCAGAGCATTTGTGCTACTTGAGATCATTTCGAGAAGTAAATGAAGTTCAAGGACAACTTGCTTTAATAAATTCTAAAGCTGGAATGTCGATGAGAACATCTTATGAAGTGATGGGTCAAGGAGTTGGAGGCACGGAGAATCTTCCTTTTCGATTTTCGGACTTAAAGAACTATCTAATGACAACTCGTCAAAAGGAGATGGTGGCTGGTGAAGCAACTGTTATTCAAGAATTCTTTAGAAATGAAGCTCTCTCGAAACCAGGTTTTTACTATGATATCCAAGTTGATGCTGCAGAAGACATAGCCAGTATTTTTTGGGCAGATGGAATTATGCAACAAGATTATGCTCTATTTGGTGATGTTGTCAGTTTTGATACAACTTACCGAACAAACAATAAATATCGGCCATTAGCTGCCTTTCTTGGTTTTGACAATCATCGTAAGAGTGTGTTATTTGGTGCTGCGCTACTGTATGACGAGACATCAGCTACTTTTGATTGGTTGTTTACAACTTTTTTGAAGTGTATGTCCAATAAGAAACCTCAAACCATATACACAGACCAGGCTGGTGCGTTGTTGAAGTCAATTCCGAATGTTTTTCAAGGTGTTTTTCATGGTCTTTGCTCATGGCACATGGGAGAGAATGCAAAGAAAAATCTCGGCTCTCGTGCAAACAGTGCATTTTTCGATGAGTTAACTAATTTGGTTTCAAATGTCGAAGATGAATCAGATTTCGACTACAATTGGGATCAGATGATGAAAAACTGTTTTAATGGAAGGCCTACTTCGGACTTTAAGTGGCTTGTTCAAACTCATTCAAATCGTATGCATTGGTCTTCAGTTTGGGTGAGGTCACATTTTACAGCTGGTTTGAAAACGACACAGTTAAGTGAGTCTTTCAATGCTTTTCTTCGTGGATTTTTGCAGCCAGACCATTCACTTGTTCGATTCTTTAGTCATTTCAACATTATGGTTCAGAGAATGAGGGATAATCATGCTGAGTTGGACTTTAAGGCTGCAAACACTAGAACAAAAAATAATTATCCCAACAGTCAGCTTATGCGGTCCGTAGTAAACAAGTATACACCATCTTGCTTTTCATTTATTCACAGTCAGTATGACCTTTCCTTCAAATACTATTATGAGGAGGACACAACAAAAGGGTCAGAATTGAACAAGTTCTTCAAAGTTTTCACAATTGAGAAGGTTGATTATAATTACGATGATGTTGATAATGATAATGAGAGGGTTTCGAATGTTGATGTTTTGGATGCAGAATTTGAAGAAAACCTTTCCCCAAGGTTTGAAGATCATAATCGACTTGATGAAAGGGTTGTCACAGTCGACATTGGGAGCAAAAGTTTTACTTGTTCATGTCGTATGTTTGAGAACCGGGGTTTCTTATGTCGACATGTTTTCAAGATTTTGGAGGTCTTAGGTGGTCATGTGCAATATCATTTTTTGAAGACTATACCTGCACAATATGTTTTAAAGCGGTGGACTAGAGATGTGCGTCCGTCTGTCGATAAGCTGAAATCCACCATGAATGTTGGCACTAAAGACACCACTGAAGCGCAACGATATCAACAAATTTGTGCTGTTACAGTTCAGCTTTCTACACGTGTTTGCGCAGATGCAGAGGCATCTGAAATATTTCTCAACGGTGTTCTTGAGGCAGGGAAAAAGGCAGAGGAGTTTCTTATTTCTAAAGGTATTCATACAGATCGATCATCCGTTACGCCTTCTAAGTCTTCAAAAGCAGTTGCTGTCTGTGAACCATCTGTTGGGACTGCACCAAAGTTCAAAGAAAGACCAAATCCAATTAGGTCAAAGAAGCGACTTAAAAGTGATTATGAAAAAGCTAGAGCAAGACAGAAATTCCTTATAGCTCGGAAGAAGCAAAAGAAAGATGATGAGGCTTTAACAAATTAA
Protein sequence

>Msa0055780

MDLILTSSESGQLTVENSVIDADSSQCYSFSDKESWKSLVFKSIKEIEDFYFNYAYNTGFSVRSMLKSKNNSQNKKSDKVHYVRYVCNKEGFKKGSLLNPKNRPTCDSPVLVEYEKAKEKPEERVGCKAGIYLKLDEALNVYKIYKWEVDHCHPLHKPEHLCYLRSFREVNEVQGQLALINSKAGMSMRTSYEVMGQGVGGTENLPFRFSDLKNYLMTTRQKEMVAGEATVIQEFFRNEALSKPGFYYDIQVDAAEDIASIFWADGIMQQDYALFGDVVSFDTTYRTNNKYRPLAAFLGFDNHRKSVLFGAALLYDETSATFDWLFTTFLKCMSNKKPQTIYTDQAGALLKSIPNVFQGVFHGLCSWHMGENAKKNLGSRANSAFFDELTNLVSNVEDESDFDYNWDQMMKNCFNGRPTSDFKWLVQTHSNRMHWSSVWVRSHFTAGLKTTQLSESFNAFLRGFLQPDHSLVRFFSHFNIMVQRMRDNHAELDFKAANTRTKNNYPNSQLMRSVVNKYTPSCFSFIHSQYDLSFKYYYEEDTTKGSELNKFFKVFTIEKVDYNYDDVDNDNERVSNVDVLDAEFEENLSPRFEDHNRLDERVVTVDIGSKSFTCSCRMFENRGFLCRHVFKILEVLGGHVQYHFLKTIPAQYVLKRWTRDVRPSVDKLKSTMNVGTKDTTEAQRYQQICAVTVQLSTRVCADAEASEIFLNGVLEAGKKAEEFLISKGIHTDRSSVTPSKSSKAVAVCEPSVGTAPKFKERPNPIRSKKRLKSDYEKARARQKFLIARKKQKKDDEALTN*