Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0062290 | sp|P42774|GBF1_ARATH | 25.641 | 273 | 175 | 7 | 74 | 332 | 28 | 286 | 3.97e-17 | 84.0 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0062290 | A0A072VRN1 | 93.056 | 288 | 18 | 1 | 45 | 332 | 1 | 286 | 0.0 | 557 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0062290 | TF | bZIP |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0062290 | MtrunA17_Chr1g0162721 | 93.056 | 288 | 18 | 1 | 45 | 332 | 1 | 286 | 0.0 | 557 |
| Msa0062290 | MtrunA17_Chr2g0302481 | 58.673 | 196 | 46 | 5 | 139 | 332 | 5 | 167 | 6.96e-62 | 195 |
| Msa0062290 | MtrunA17_Chr2g0302501 | 51.220 | 164 | 32 | 7 | 35 | 196 | 10 | 127 | 1.64e-38 | 133 |
| Msa0062290 | MtrunA17_Chr4g0065261 | 50.000 | 90 | 24 | 2 | 72 | 141 | 1 | 89 | 3.05e-19 | 84.0 |
| Msa0062290 | MtrunA17_Chr4g0065261 | 55.882 | 68 | 29 | 1 | 265 | 332 | 88 | 154 | 5.98e-15 | 72.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0062290 | AT4G36730.2 | 24.907 | 269 | 180 | 5 | 74 | 332 | 28 | 284 | 6.11e-19 | 86.3 |
| Msa0062290 | AT4G36730.1 | 25.641 | 273 | 175 | 7 | 74 | 332 | 28 | 286 | 4.03e-18 | 84.0 |
| Msa0062290 | AT2G35530.1 | 41.538 | 65 | 38 | 0 | 268 | 332 | 305 | 369 | 8.63e-12 | 66.2 |
| Msa0062290 | AT1G32150.1 | 32.099 | 162 | 94 | 5 | 182 | 332 | 203 | 359 | 7.58e-11 | 63.2 |
Find 68 sgRNAs with CRISPR-Local
Find 283 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACAACTATGTGGGGTTTAT+TGG | 0.126290 | 1_2:-21586576 | None:intergenic |
| TCTGGTCTGGCTCAGAATTT+AGG | 0.161997 | 1_2:+21587561 | Msa0062290:CDS |
| GAAATGGTACACAGAAATTT+TGG | 0.193208 | 1_2:+21586878 | Msa0062290:CDS |
| GATTTATGCTTCTTAGTTAA+AGG | 0.201185 | 1_2:-21587360 | None:intergenic |
| ACTGGGGAATCAAGAGAATT+TGG | 0.246551 | 1_2:+21586959 | Msa0062290:CDS |
| TGCAAGTGGATGATTATAAA+AGG | 0.250430 | 1_2:-21586353 | None:intergenic |
| TCCCCAGTCATTAAACTTAC+AGG | 0.268465 | 1_2:-21586944 | None:intergenic |
| TAGCAAATAAGTTGAAATCT+TGG | 0.305874 | 1_2:-21586910 | None:intergenic |
| TGTGGTAACATAGGTTTGTT+TGG | 0.349768 | 1_2:-21586166 | None:intergenic |
| CTTCTTCAGTTTCACTTCTC+TGG | 0.355422 | 1_2:+21585055 | Msa0062290:CDS |
| CACAAGTTTCTCGATCTTGA+TGG | 0.368390 | 1_2:+21585973 | Msa0062290:CDS |
| CTGGTCTGGCTCAGAATTTA+GGG | 0.370245 | 1_2:+21587562 | Msa0062290:CDS |
| TCAGTACATCTTGCAAAATC+AGG | 0.425666 | 1_2:+21586396 | Msa0062290:CDS |
| AAGATCAAAGATAAAGAAAC+AGG | 0.437513 | 1_2:+21588975 | Msa0062290:CDS |
| AAGGAAGAATCCACTCCGTT+TGG | 0.441874 | 1_2:+21585998 | Msa0062290:CDS |
| ACAAGTTTCTCGATCTTGAT+GGG | 0.458271 | 1_2:+21585974 | Msa0062290:CDS |
| TTCCTTGTAGAAAATCCATC+TGG | 0.463105 | 1_2:+21587543 | Msa0062290:intron |
| TAAGCTTTCTGAGGAATGTC+TGG | 0.463695 | 1_2:+21590128 | Msa0062290:CDS |
| GCAAGTGGATGATTATAAAA+GGG | 0.464969 | 1_2:-21586352 | None:intergenic |
| GGATGATTATAAAAGGGGCT+TGG | 0.468279 | 1_2:-21586346 | None:intergenic |
| TGGAAGACCTTACAATTTCA+CGG | 0.479597 | 1_2:+21586018 | Msa0062290:CDS |
| TGTAGAAAATCCATCTGGTC+TGG | 0.486514 | 1_2:+21587548 | Msa0062290:intron |
| TAATAAGATAGACACTCTTA+AGG | 0.488014 | 1_2:+21590074 | Msa0062290:CDS |
| GCTTAGCAAGCGTTTGTGCT+AGG | 0.489007 | 1_2:-21590110 | None:intergenic |
| AACAGGCTTATTACAATCCC+GGG | 0.494380 | 1_2:+21586317 | Msa0062290:intron |
| GTTAAAATGATGGACCTCAA+TGG | 0.494777 | 1_2:-21590172 | None:intergenic |
| AAACAGGCTTATTACAATCC+CGG | 0.495086 | 1_2:+21586316 | Msa0062290:intron |
| TGAGGCACCGTGAAATTGTA+AGG | 0.513205 | 1_2:-21586025 | None:intergenic |
| GGTTTATTGGACAGCCTCAC+GGG | 0.515395 | 1_2:-21586563 | None:intergenic |
| CAACCTGTAAGTTTAATGAC+TGG | 0.518291 | 1_2:+21586941 | Msa0062290:CDS |
| AACCTGTAAGTTTAATGACT+GGG | 0.521729 | 1_2:+21586942 | Msa0062290:CDS |
| GGGTTTATTGGACAGCCTCA+CGG | 0.528698 | 1_2:-21586564 | None:intergenic |
| CTTCAACATGATGCTCTACA+TGG | 0.529457 | 1_2:+21586539 | Msa0062290:CDS |
| ATATTGATTCAGGAAGCTAC+AGG | 0.541673 | 1_2:+21585947 | Msa0062290:intron |
| ATGTACTGATGATACAAGTA+AGG | 0.542138 | 1_2:-21586382 | None:intergenic |
| AAATTCTGAGCCAGACCAGA+TGG | 0.553977 | 1_2:-21587558 | None:intergenic |
| ACATTGGACTACAGCTATGC+AGG | 0.556528 | 1_2:+21586186 | Msa0062290:CDS |
| GAACAAATTGTACCTCATTG+AGG | 0.556643 | 1_2:-21587020 | None:intergenic |
| GGCTCACCTCAACAACTATG+TGG | 0.564253 | 1_2:-21586586 | None:intergenic |
| GTAGTCCAATGTGGTAACAT+AGG | 0.564454 | 1_2:-21586175 | None:intergenic |
| TGGAAGCAAGAGATCACCAG+AGG | 0.574208 | 1_2:+21587118 | Msa0062290:CDS |
| TCTAACATGATTACTGCGGA+TGG | 0.576063 | 1_2:+21587381 | Msa0062290:CDS |
| AAAGGGGCTTGGAGTAGACC+CGG | 0.576933 | 1_2:-21586335 | None:intergenic |
| GCTCACCTCAACAACTATGT+GGG | 0.580762 | 1_2:-21586585 | None:intergenic |
| AAAGAGGGGAGTTAAAATGA+TGG | 0.581509 | 1_2:-21590182 | None:intergenic |
| AAATTGTAAGGTCTTCCAAA+CGG | 0.581928 | 1_2:-21586013 | None:intergenic |
| AAGTAAGGAGCAGCTGCAAG+TGG | 0.592524 | 1_2:-21586367 | None:intergenic |
| TTTCTCGATCTTGATGGGGA+AGG | 0.594200 | 1_2:+21585979 | Msa0062290:CDS |
| TAAACCCCACATAGTTGTTG+AGG | 0.602835 | 1_2:+21586580 | Msa0062290:CDS |
| ACAAACCTATGTTACCACAT+TGG | 0.603220 | 1_2:+21586170 | Msa0062290:CDS |
| CAAGTGGATGATTATAAAAG+GGG | 0.603697 | 1_2:-21586351 | None:intergenic |
| AACGCTTGCTAAGCTTTCTG+AGG | 0.605311 | 1_2:+21590119 | Msa0062290:CDS |
| CAAGTTTCTCGATCTTGATG+GGG | 0.608143 | 1_2:+21585975 | Msa0062290:CDS |
| CAATGAAAATGATTCCATTG+AGG | 0.612331 | 1_2:+21590158 | Msa0062290:CDS |
| AGAAGTTCGTGAAAACGAAA+CGG | 0.616301 | 1_2:-21585037 | None:intergenic |
| GGAAGCAAGAGATCACCAGA+GGG | 0.616601 | 1_2:+21587119 | Msa0062290:CDS |
| AACATCAACGTCAACAACGT+CGG | 0.620687 | 1_2:-21587607 | None:intergenic |
| GAATTTAGGGACAGTCGTCA+AGG | 0.625189 | 1_2:+21587575 | Msa0062290:CDS |
| ACCTGTAAGTTTAATGACTG+GGG | 0.644193 | 1_2:+21586943 | Msa0062290:CDS |
| CTCACCTCAACAACTATGTG+GGG | 0.660296 | 1_2:-21586584 | None:intergenic |
| AAGGGGCTTGGAGTAGACCC+GGG | 0.660338 | 1_2:-21586334 | None:intergenic |
| GATTTACTGACATCATCTTG+AGG | 0.660566 | 1_2:-21586043 | None:intergenic |
| TGTGTGCGCAGTGCAGCAAG+TGG | 0.664216 | 1_2:+21587098 | Msa0062290:intron |
| GTAAGGTCTTCCAAACGGAG+TGG | 0.675114 | 1_2:-21586008 | None:intergenic |
| TAAATCTAACATGATTACTG+CGG | 0.677606 | 1_2:+21587377 | Msa0062290:CDS |
| ATGCTCTACATGGTCCCGTG+AGG | 0.706895 | 1_2:+21586549 | Msa0062290:CDS |
| ACAGGGATGGAACCTCAATG+AGG | 0.714168 | 1_2:+21587008 | Msa0062290:CDS |
| TGCATAGCTGTAGTCCAATG+TGG | 0.721179 | 1_2:-21586184 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTATTATAAGATAATCAAA+AGG | - | chr1_2:21587423-21587442 | None:intergenic | 10.0% |
| !! | TATTAAATAAAATTAGAGTA+CGG | - | chr1_2:21589209-21589228 | None:intergenic | 10.0% |
| !! | TCAATAATATTAAAGCAAAT+AGG | - | chr1_2:21585109-21585128 | None:intergenic | 15.0% |
| !!! | AATATTATTGATTCATTGAT+AGG | + | chr1_2:21585118-21585137 | Msa0062290:intron | 15.0% |
| !! | TTTAAAAATTCAGTTTCAAT+TGG | + | chr1_2:21585294-21585313 | Msa0062290:intron | 15.0% |
| !!! | GTATGATTATGATATTTTTT+AGG | + | chr1_2:21585318-21585337 | Msa0062290:intron | 15.0% |
| !!! | TTCATAATTGTACATTATTT+TGG | + | chr1_2:21585905-21585924 | Msa0062290:intron | 15.0% |
| !!! | TCTTCTTTTAAATTTTAAAC+AGG | + | chr1_2:21586300-21586319 | Msa0062290:intron | 15.0% |
| !!! | ATAATTTTTTATTCAGACTT+GGG | - | chr1_2:21587079-21587098 | None:intergenic | 15.0% |
| !! | TTAAAATTATTCTTTAGTAC+AGG | + | chr1_2:21587280-21587299 | Msa0062290:intron | 15.0% |
| !! | ATTTAATAAAATAGAAGTGA+TGG | + | chr1_2:21588121-21588140 | Msa0062290:intron | 15.0% |
| !!! | ATATTTTCTGTAATTATATG+AGG | - | chr1_2:21589063-21589082 | None:intergenic | 15.0% |
| !! | AAAATGTAAAAAGAAAAAGA+TGG | + | chr1_2:21589126-21589145 | Msa0062290:intron | 15.0% |
| !!! | TTTTATAAATTATGTAATCC+AGG | - | chr1_2:21589973-21589992 | None:intergenic | 15.0% |
| !!! | ACAAATAATTGTTTTCGATA+GGG | - | chr1_2:21585159-21585178 | None:intergenic | 20.0% |
| !!! | TGGATTTTTTTACAAAATTG+AGG | + | chr1_2:21585413-21585432 | Msa0062290:intron | 20.0% |
| !!! | GGATTTTTTTACAAAATTGA+GGG | + | chr1_2:21585414-21585433 | Msa0062290:intron | 20.0% |
| !! | AATAAAGATTTGTACAAGAA+CGG | - | chr1_2:21585612-21585631 | None:intergenic | 20.0% |
| !!! | TTGAAGGAAAATTTTCAATT+TGG | + | chr1_2:21585744-21585763 | Msa0062290:intron | 20.0% |
| !!! | GAAAATTTTCAATTTGGTAT+TGG | + | chr1_2:21585750-21585769 | Msa0062290:intron | 20.0% |
| !!! | TTAAAAGCAAATATTGATTC+AGG | + | chr1_2:21585937-21585956 | Msa0062290:intron | 20.0% |
| !! | ATATATCTATTGAAAGGTTT+AGG | - | chr1_2:21586610-21586629 | None:intergenic | 20.0% |
| !! | CAATGAATATATCTATTGAA+AGG | - | chr1_2:21586616-21586635 | None:intergenic | 20.0% |
| !!! | TTTTTCTATCATAATGTCTA+TGG | + | chr1_2:21586652-21586671 | Msa0062290:intron | 20.0% |
| !! | TATGGTTAGTATATATTTAG+TGG | + | chr1_2:21586684-21586703 | Msa0062290:intron | 20.0% |
| !!! | ATATGAATGTTTATGCATTT+TGG | + | chr1_2:21586830-21586849 | Msa0062290:intron | 20.0% |
| !!! | CATAATTTTTTATTCAGACT+TGG | - | chr1_2:21587080-21587099 | None:intergenic | 20.0% |
| !! | AAGAAATGAGTAGTTTATTA+AGG | + | chr1_2:21587255-21587274 | Msa0062290:intron | 20.0% |
| !!! | ATGTTTGAAAAGTTTTTTTG+TGG | + | chr1_2:21587680-21587699 | Msa0062290:intron | 20.0% |
| !! | GTAACATAGATTTAGAAAAA+TGG | + | chr1_2:21588232-21588251 | Msa0062290:intron | 20.0% |
| !!! | GATCATACAGATATTTTTAT+AGG | - | chr1_2:21588610-21588629 | None:intergenic | 20.0% |
| !! | AAGTTTAATTCATAACTATC+TGG | + | chr1_2:21588852-21588871 | Msa0062290:intron | 20.0% |
| !!! | GAGTTGAAAAAAAACTTTTT+GGG | - | chr1_2:21589187-21589206 | None:intergenic | 20.0% |
| !! | AAATGTCAAGTAGAAAAAAT+AGG | - | chr1_2:21589308-21589327 | None:intergenic | 20.0% |
| !! | TGTTATGTGCTTTAATAAAT+AGG | - | chr1_2:21589471-21589490 | None:intergenic | 20.0% |
| !! | TACATGATTATGATTATACA+TGG | + | chr1_2:21589735-21589754 | Msa0062290:intron | 20.0% |
| !!! | TAGTAATGGAAGATAATATT+TGG | - | chr1_2:21589874-21589893 | None:intergenic | 20.0% |
| !! | GACAAATAATTGTTTTCGAT+AGG | - | chr1_2:21585160-21585179 | None:intergenic | 25.0% |
| ! | CCAATTAAAAAACACAATGT+AGG | - | chr1_2:21585396-21585415 | None:intergenic | 25.0% |
| !!! | CCTACATTGTGTTTTTTAAT+TGG | + | chr1_2:21585393-21585412 | Msa0062290:intron | 25.0% |
| ! | ACATAACGTCAAAGAATATT+TGG | - | chr1_2:21585886-21585905 | None:intergenic | 25.0% |
| ! | ATACATATTACTGCTTTGTA+TGG | + | chr1_2:21586426-21586445 | Msa0062290:intron | 25.0% |
| !! | TGTCTATGGAATTCATTTTA+TGG | + | chr1_2:21586666-21586685 | Msa0062290:intron | 25.0% |
| !! | TGGAATTTTCATATTTCTTC+AGG | + | chr1_2:21586704-21586723 | Msa0062290:intron | 25.0% |
| !! | GGAATTTTCATATTTCTTCA+GGG | + | chr1_2:21586705-21586724 | Msa0062290:intron | 25.0% |
| !! | GAATTTTCATATTTCTTCAG+GGG | + | chr1_2:21586706-21586725 | Msa0062290:intron | 25.0% |
| !! | AATTTTCATATTTCTTCAGG+GGG | + | chr1_2:21586707-21586726 | Msa0062290:intron | 25.0% |
| ! | TAAATCATTCCACTAGTAAT+TGG | - | chr1_2:21586747-21586766 | None:intergenic | 25.0% |
| ! | AACTCATACACAATTCATTA+TGG | - | chr1_2:21586799-21586818 | None:intergenic | 25.0% |
| !!! | AGTTGAAATCTTGGTTTTTT+TGG | - | chr1_2:21586904-21586923 | None:intergenic | 25.0% |
| !! | TAGCAAATAAGTTGAAATCT+TGG | - | chr1_2:21586913-21586932 | None:intergenic | 25.0% |
| !! | TACAATTTGTTCTTGTTCTT+CGG | + | chr1_2:21587031-21587050 | Msa0062290:intron | 25.0% |
| ! | GATTTATGCTTCTTAGTTAA+AGG | - | chr1_2:21587363-21587382 | None:intergenic | 25.0% |
| ! | TAAATCTAACATGATTACTG+CGG | + | chr1_2:21587377-21587396 | Msa0062290:CDS | 25.0% |
| ! | TCTGTAATTTGAATTTCAGA+AGG | + | chr1_2:21587462-21587481 | Msa0062290:intron | 25.0% |
| ! | TGATGCTCAACTTAAAAATA+CGG | + | chr1_2:21587629-21587648 | Msa0062290:CDS | 25.0% |
| !!! | CAGTTTTTTAGTAAGATAAC+TGG | + | chr1_2:21587726-21587745 | Msa0062290:intron | 25.0% |
| ! | ACATAGATTTAGAAAAATGG+AGG | + | chr1_2:21588235-21588254 | Msa0062290:intron | 25.0% |
| ! | TATACATACAATATGTCGAT+GGG | - | chr1_2:21588328-21588347 | None:intergenic | 25.0% |
| ! | CTAGATATGCTTAAATTTGT+TGG | + | chr1_2:21588384-21588403 | Msa0062290:intron | 25.0% |
| ! | CTAGATATGCTTAAATTTGT+TGG | + | chr1_2:21588384-21588403 | Msa0062290:intron | 25.0% |
| !!! | ACAGATATTTTTATAGGACT+AGG | - | chr1_2:21588604-21588623 | None:intergenic | 25.0% |
| ! | TTCTATAACTATTGCCAATT+TGG | - | chr1_2:21588645-21588664 | None:intergenic | 25.0% |
| ! | TAGAATGCTAGATTGAAAAA+TGG | - | chr1_2:21588777-21588796 | None:intergenic | 25.0% |
| !! | CATTCTAGCTAAATATGTAT+GGG | + | chr1_2:21588790-21588809 | Msa0062290:intron | 25.0% |
| !! | ATTCTAGCTAAATATGTATG+GGG | + | chr1_2:21588791-21588810 | Msa0062290:intron | 25.0% |
| ! | AGAAAGTAAATTCCTTCTTA+AGG | + | chr1_2:21588824-21588843 | Msa0062290:intron | 25.0% |
| ! | AAAGAAAAAGATTGTCAAAC+AGG | + | chr1_2:21588941-21588960 | Msa0062290:CDS | 25.0% |
| ! | AAGATCAAAGATAAAGAAAC+AGG | + | chr1_2:21588975-21588994 | Msa0062290:CDS | 25.0% |
| ! | ATGAGGATAACTATGTATAA+CGG | - | chr1_2:21589046-21589065 | None:intergenic | 25.0% |
| ! | AATGTCTATAAATTCGACAA+TGG | + | chr1_2:21589086-21589105 | Msa0062290:intron | 25.0% |
| ! | ATGTCTATAAATTCGACAAT+GGG | + | chr1_2:21589087-21589106 | Msa0062290:intron | 25.0% |
| ! | ATGTAAAAAGAAAAAGATGG+TGG | + | chr1_2:21589129-21589148 | Msa0062290:intron | 25.0% |
| !! | GGAGTTGAAAAAAAACTTTT+TGG | - | chr1_2:21589188-21589207 | None:intergenic | 25.0% |
| ! | CAAATAGGTACAAGAATATT+GGG | - | chr1_2:21589434-21589453 | None:intergenic | 25.0% |
| ! | TATGTGCTTTAATAAATAGG+TGG | - | chr1_2:21589468-21589487 | None:intergenic | 25.0% |
| ! | ACAATCATGTTCCAAATAAA+GGG | - | chr1_2:21589712-21589731 | None:intergenic | 25.0% |
| ! | TACAATCATGTTCCAAATAA+AGG | - | chr1_2:21589713-21589732 | None:intergenic | 25.0% |
| !! | TTTATTTGGAACATGATTGT+AGG | + | chr1_2:21589712-21589731 | Msa0062290:intron | 25.0% |
| ! | TGATTATGATTATACATGGT+AGG | + | chr1_2:21589739-21589758 | Msa0062290:intron | 25.0% |
| ! | GATTATGATTATACATGGTA+GGG | + | chr1_2:21589740-21589759 | Msa0062290:intron | 25.0% |
| !! | TATTGTTGTTGTATGATCAT+AGG | + | chr1_2:21589829-21589848 | Msa0062290:intron | 25.0% |
| ! | AAGATAATATTTGGCTGTTT+GGG | - | chr1_2:21589865-21589884 | None:intergenic | 25.0% |
| ! | ATTATCTTCCATTACTATTG+TGG | + | chr1_2:21589877-21589896 | Msa0062290:intron | 25.0% |
| ! | TATAAATTATGTAATCCAGG+AGG | - | chr1_2:21589970-21589989 | None:intergenic | 25.0% |
| ! | TAATAAGATAGACACTCTTA+AGG | + | chr1_2:21590074-21590093 | Msa0062290:CDS | 25.0% |
| !! | TTAGGTTTTCTTGTTGATAG+TGG | + | chr1_2:21585336-21585355 | Msa0062290:intron | 30.0% |
| ATTGAGGGATTTGTAATTGT+TGG | + | chr1_2:21585429-21585448 | Msa0062290:intron | 30.0% | |
| ! | TAATTGTTGGAGTCTAGTTT+AGG | + | chr1_2:21585442-21585461 | Msa0062290:intron | 30.0% |
| CAAGAAAAGGAAAGAAAAAG+TGG | - | chr1_2:21585555-21585574 | None:intergenic | 30.0% | |
| CTTGCTTGATTAACAAGAAA+AGG | - | chr1_2:21585568-21585587 | None:intergenic | 30.0% | |
| CTTGTTAATCAAGCAAGAAA+AGG | + | chr1_2:21585571-21585590 | Msa0062290:intron | 30.0% | |
| GGTAGTTTCTTCAAATTCTA+TGG | - | chr1_2:21585683-21585702 | None:intergenic | 30.0% | |
| AGTATTGTTAATCACAATCG+CGG | - | chr1_2:21585711-21585730 | None:intergenic | 30.0% | |
| TGTGTATACATTCTCTTGTT+TGG | + | chr1_2:21585805-21585824 | Msa0062290:intron | 30.0% | |
| ! | TATACATTCTCTTGTTTGGT+TGG | + | chr1_2:21585809-21585828 | Msa0062290:intron | 30.0% |
| AAATTGTAAGGTCTTCCAAA+CGG | - | chr1_2:21586016-21586035 | None:intergenic | 30.0% | |
| GATGTCAGTAAATCATGTTA+TGG | + | chr1_2:21586052-21586071 | Msa0062290:intron | 30.0% | |
| CAAGTGGATGATTATAAAAG+GGG | - | chr1_2:21586354-21586373 | None:intergenic | 30.0% | |
| GCAAGTGGATGATTATAAAA+GGG | - | chr1_2:21586355-21586374 | None:intergenic | 30.0% | |
| TGCAAGTGGATGATTATAAA+AGG | - | chr1_2:21586356-21586375 | None:intergenic | 30.0% | |
| ! | ATGTACTGATGATACAAGTA+AGG | - | chr1_2:21586385-21586404 | None:intergenic | 30.0% |
| !! | CTTTCACATTCTTTGTTGTT+TGG | + | chr1_2:21586496-21586515 | Msa0062290:intron | 30.0% |
| ! | GAAATGGTACACAGAAATTT+TGG | + | chr1_2:21586878-21586897 | Msa0062290:CDS | 30.0% |
| AACCTGTAAGTTTAATGACT+GGG | + | chr1_2:21586942-21586961 | Msa0062290:CDS | 30.0% | |
| ATTCTTTAGTACAGGTCATA+TGG | + | chr1_2:21587288-21587307 | Msa0062290:intron | 30.0% | |
| CAATCATTCACACATGTTAT+AGG | + | chr1_2:21587810-21587829 | Msa0062290:intron | 30.0% | |
| AATGGCAGTTCATTCAAATT+CGG | - | chr1_2:21587876-21587895 | None:intergenic | 30.0% | |
| CGATTGAAAACACTAGTTAT+AGG | + | chr1_2:21587908-21587927 | Msa0062290:intron | 30.0% | |
| TTATAGGCACTCTTTGATAT+TGG | + | chr1_2:21587924-21587943 | Msa0062290:intron | 30.0% | |
| TAATATGTGCTCATAAAGCT+AGG | - | chr1_2:21587994-21588013 | None:intergenic | 30.0% | |
| CACATATTAAGCACTAATGT+AGG | + | chr1_2:21588005-21588024 | Msa0062290:intron | 30.0% | |
| AAAAGTTATGTTGTAACACG+AGG | - | chr1_2:21588060-21588079 | None:intergenic | 30.0% | |
| ! | TGTTAGTTTCGTACAAATGT+CGG | + | chr1_2:21588158-21588177 | Msa0062290:intron | 30.0% |
| GTCGCAAAAATAAAACTCTA+AGG | + | chr1_2:21588257-21588276 | Msa0062290:intron | 30.0% | |
| !! | CAAAAATAAAACTCTAAGGC+TGG | + | chr1_2:21588261-21588280 | Msa0062290:intron | 30.0% |
| ATACATACAATATGTCGATG+GGG | - | chr1_2:21588327-21588346 | None:intergenic | 30.0% | |
| CTATACATACAATATGTCGA+TGG | - | chr1_2:21588329-21588348 | None:intergenic | 30.0% | |
| ! | ACATACAATGTGTTGTTGAT+GGG | - | chr1_2:21588499-21588518 | None:intergenic | 30.0% |
| ! | TACATACAATGTGTTGTTGA+TGG | - | chr1_2:21588500-21588519 | None:intergenic | 30.0% |
| ! | TTTTTATAGGACTAGGTAGA+TGG | - | chr1_2:21588597-21588616 | None:intergenic | 30.0% |
| AATGCTAGATTGAAAAATGG+TGG | - | chr1_2:21588774-21588793 | None:intergenic | 30.0% | |
| ! | GCATTCTAGCTAAATATGTA+TGG | + | chr1_2:21588789-21588808 | Msa0062290:intron | 30.0% |
| TAAACTTAGCAACCTTAAGA+AGG | - | chr1_2:21588839-21588858 | None:intergenic | 30.0% | |
| ! | TGGTGGTTCATTTTCATTAT+TGG | + | chr1_2:21589146-21589165 | Msa0062290:intron | 30.0% |
| ! | AAATGCATGTTTAGGACATA+AGG | - | chr1_2:21589373-21589392 | None:intergenic | 30.0% |
| GTCCTAAACATGCATTTAAA+TGG | + | chr1_2:21589376-21589395 | Msa0062290:intron | 30.0% | |
| ! | TGCCATTTAAATGCATGTTT+AGG | - | chr1_2:21589381-21589400 | None:intergenic | 30.0% |
| CCAAATAGGTACAAGAATAT+TGG | - | chr1_2:21589435-21589454 | None:intergenic | 30.0% | |
| CCAATATTCTTGTACCTATT+TGG | + | chr1_2:21589432-21589451 | Msa0062290:intron | 30.0% | |
| TAAAGCACATAACAAAACTC+TGG | + | chr1_2:21589477-21589496 | Msa0062290:intron | 30.0% | |
| AAAGCACATAACAAAACTCT+GGG | + | chr1_2:21589478-21589497 | Msa0062290:intron | 30.0% | |
| TTGAAACTGATCATCAATGA+AGG | - | chr1_2:21589603-21589622 | None:intergenic | 30.0% | |
| CAACAATCTTTCCCTTTATT+TGG | + | chr1_2:21589698-21589717 | Msa0062290:intron | 30.0% | |
| GAAGATAATATTTGGCTGTT+TGG | - | chr1_2:21589866-21589885 | None:intergenic | 30.0% | |
| TTCAACTTCCACAATAGTAA+TGG | - | chr1_2:21589888-21589907 | None:intergenic | 30.0% | |
| !! | AATTTGTTATAGTTTCCTCC+TGG | + | chr1_2:21589952-21589971 | Msa0062290:intron | 30.0% |
| ! | CTCAATGGAATCATTTTCAT+TGG | - | chr1_2:21590160-21590179 | None:intergenic | 30.0% |
| CAATGAAAATGATTCCATTG+AGG | + | chr1_2:21590158-21590177 | Msa0062290:CDS | 30.0% | |
| AGAAGTTCGTGAAAACGAAA+CGG | - | chr1_2:21585040-21585059 | None:intergenic | 35.0% | |
| ! | CTTTCATCTGAGATGAACTT+CGG | + | chr1_2:21585188-21585207 | Msa0062290:intron | 35.0% |
| AAAGATTTGTACAAGAACGG+AGG | - | chr1_2:21585609-21585628 | None:intergenic | 35.0% | |
| TTAATCACAATCGCGGAAAA+TGG | - | chr1_2:21585704-21585723 | None:intergenic | 35.0% | |
| GCGATTGTGATTAACAATAC+TGG | + | chr1_2:21585710-21585729 | Msa0062290:intron | 35.0% | |
| TGTGATTAACAATACTGGTC+AGG | + | chr1_2:21585715-21585734 | Msa0062290:intron | 35.0% | |
| ACTGGTCAGGTTTAAATTGA+AGG | + | chr1_2:21585728-21585747 | Msa0062290:intron | 35.0% | |
| !! | ATATTGATTCAGGAAGCTAC+AGG | + | chr1_2:21585947-21585966 | Msa0062290:intron | 35.0% |
| ACAAGTTTCTCGATCTTGAT+GGG | + | chr1_2:21585974-21585993 | Msa0062290:CDS | 35.0% | |
| TGGAAGACCTTACAATTTCA+CGG | + | chr1_2:21586018-21586037 | Msa0062290:CDS | 35.0% | |
| GATTTACTGACATCATCTTG+AGG | - | chr1_2:21586046-21586065 | None:intergenic | 35.0% | |
| ! | TGTGGTAACATAGGTTTGTT+TGG | - | chr1_2:21586169-21586188 | None:intergenic | 35.0% |
| ACAAACCTATGTTACCACAT+TGG | + | chr1_2:21586170-21586189 | Msa0062290:CDS | 35.0% | |
| TACTCTGAACCAATTTGTGA+TGG | + | chr1_2:21586223-21586242 | Msa0062290:intron | 35.0% | |
| ACGAAGATACCATCACAAAT+TGG | - | chr1_2:21586235-21586254 | None:intergenic | 35.0% | |
| AAACAGGCTTATTACAATCC+CGG | + | chr1_2:21586316-21586335 | Msa0062290:intron | 35.0% | |
| TCAGTACATCTTGCAAAATC+AGG | + | chr1_2:21586396-21586415 | Msa0062290:CDS | 35.0% | |
| ATATTACTGCTTTGTATGGC+AGG | + | chr1_2:21586430-21586449 | Msa0062290:intron | 35.0% | |
| AACAACTATGTGGGGTTTAT+TGG | - | chr1_2:21586579-21586598 | None:intergenic | 35.0% | |
| !!! | TGCAAAGGCTTTTTCAGAAA+TGG | + | chr1_2:21586862-21586881 | Msa0062290:CDS | 35.0% |
| CAACCTGTAAGTTTAATGAC+TGG | + | chr1_2:21586941-21586960 | Msa0062290:CDS | 35.0% | |
| ACCTGTAAGTTTAATGACTG+GGG | + | chr1_2:21586943-21586962 | Msa0062290:CDS | 35.0% | |
| GAACAAATTGTACCTCATTG+AGG | - | chr1_2:21587023-21587042 | None:intergenic | 35.0% | |
| CTAACTTCGAAACATAACAG+TGG | - | chr1_2:21587228-21587247 | None:intergenic | 35.0% | |
| GTCTAATTACATCCTTTCTG+TGG | + | chr1_2:21587328-21587347 | Msa0062290:intron | 35.0% | |
| TTCCTTGTAGAAAATCCATC+TGG | + | chr1_2:21587543-21587562 | Msa0062290:intron | 35.0% | |
| CATTATGATATGCACACACT+TGG | + | chr1_2:21587766-21587785 | Msa0062290:intron | 35.0% | |
| TTAAGCACTAATGTAGGACT+CGG | + | chr1_2:21588011-21588030 | Msa0062290:intron | 35.0% | |
| ! | AAGTGATGGAATGTAACCAT+GGG | + | chr1_2:21588135-21588154 | Msa0062290:intron | 35.0% |
| ACTGACAAATGTCAAACACT+CGG | + | chr1_2:21588183-21588202 | Msa0062290:intron | 35.0% | |
| ATATCTAGCAAGATTCGAGA+TGG | - | chr1_2:21588372-21588391 | None:intergenic | 35.0% | |
| !! | CCTTAGAGTTTTATAGGACT+AGG | - | chr1_2:21588431-21588450 | None:intergenic | 35.0% |
| CCTAGTCCTATAAAACTCTA+AGG | + | chr1_2:21588428-21588447 | Msa0062290:intron | 35.0% | |
| !! | ATCCAGCCTTAGAGTTTTAT+AGG | - | chr1_2:21588266-21588285 | None:intergenic | 35.0% |
| ! | CATACAATGTGTTGTTGATG+GGG | - | chr1_2:21588498-21588517 | None:intergenic | 35.0% |
| ATATCTAGCAAGATTCGAGA+TGG | - | chr1_2:21588372-21588391 | None:intergenic | 35.0% | |
| ! | TTAGCTGCATTTCTTTTGAC+AGG | + | chr1_2:21588897-21588916 | Msa0062290:intron | 35.0% |
| CTATAAATTCGACAATGGGT+TGG | + | chr1_2:21589091-21589110 | Msa0062290:intron | 35.0% | |
| GATAACAAAACAGCTGTGTT+TGG | + | chr1_2:21589275-21589294 | Msa0062290:intron | 35.0% | |
| AAGGTCACAAGAAAAAGCAA+AGG | - | chr1_2:21589354-21589373 | None:intergenic | 35.0% | |
| TAGGTACAAGAATATTGGGT+AGG | - | chr1_2:21589430-21589449 | None:intergenic | 35.0% | |
| ATCAAAGAAACGATGTTCTG+AGG | + | chr1_2:21589568-21589587 | Msa0062290:intron | 35.0% | |
| ! | ACTAGGTGGATTCAATTACA+TGG | - | chr1_2:21589785-21589804 | None:intergenic | 35.0% |
| ATGTAATTGAATCCACCTAG+TGG | + | chr1_2:21589784-21589803 | Msa0062290:intron | 35.0% | |
| GTTGTATGATCATAGGATCT+TGG | + | chr1_2:21589836-21589855 | Msa0062290:intron | 35.0% | |
| ! | AACGGTGAGAGAAAGTTTTG+TGG | - | chr1_2:21585022-21585041 | None:intergenic | 40.0% |
| CTTCTTCAGTTTCACTTCTC+TGG | + | chr1_2:21585055-21585074 | Msa0062290:CDS | 40.0% | |
| CACAAGTTTCTCGATCTTGA+TGG | + | chr1_2:21585973-21585992 | Msa0062290:CDS | 40.0% | |
| CAAGTTTCTCGATCTTGATG+GGG | + | chr1_2:21585975-21585994 | Msa0062290:CDS | 40.0% | |
| GTAGTCCAATGTGGTAACAT+AGG | - | chr1_2:21586178-21586197 | None:intergenic | 40.0% | |
| AACAGGCTTATTACAATCCC+GGG | + | chr1_2:21586317-21586336 | Msa0062290:intron | 40.0% | |
| GGATGATTATAAAAGGGGCT+TGG | - | chr1_2:21586349-21586368 | None:intergenic | 40.0% | |
| CTTTCTTAGACTAGGACAGA+GGG | + | chr1_2:21586456-21586475 | Msa0062290:intron | 40.0% | |
| !! | CATTCTTTGTTGTTTGGTGC+AGG | + | chr1_2:21586502-21586521 | Msa0062290:intron | 40.0% |
| CTTCAACATGATGCTCTACA+TGG | + | chr1_2:21586539-21586558 | Msa0062290:CDS | 40.0% | |
| TAAACCCCACATAGTTGTTG+AGG | + | chr1_2:21586580-21586599 | Msa0062290:CDS | 40.0% | |
| TTTCATATTTCTTCAGGGGG+TGG | + | chr1_2:21586710-21586729 | Msa0062290:intron | 40.0% | |
| TTCATATTTCTTCAGGGGGT+GGG | + | chr1_2:21586711-21586730 | Msa0062290:intron | 40.0% | |
| TTGGGGTTACCAATTACTAG+TGG | + | chr1_2:21586735-21586754 | Msa0062290:intron | 40.0% | |
| TCCCCAGTCATTAAACTTAC+AGG | - | chr1_2:21586947-21586966 | None:intergenic | 40.0% | |
| ACTGGGGAATCAAGAGAATT+TGG | + | chr1_2:21586959-21586978 | Msa0062290:CDS | 40.0% | |
| TTCTGCACCCAAAAATGACA+GGG | + | chr1_2:21586991-21587010 | Msa0062290:CDS | 40.0% | |
| !!! | GTTCCATCCCTGTCATTTTT+GGG | - | chr1_2:21587001-21587020 | None:intergenic | 40.0% |
| AATTACATCCTTTCTGTGGC+AGG | + | chr1_2:21587332-21587351 | Msa0062290:intron | 40.0% | |
| TCTAACATGATTACTGCGGA+TGG | + | chr1_2:21587381-21587400 | Msa0062290:CDS | 40.0% | |
| TACTGCGGATGGTAAGATTA+TGG | + | chr1_2:21587392-21587411 | Msa0062290:intron | 40.0% | |
| !! | GACCAGATGGATTTTCTACA+AGG | - | chr1_2:21587548-21587567 | None:intergenic | 40.0% |
| TGTAGAAAATCCATCTGGTC+TGG | + | chr1_2:21587548-21587567 | Msa0062290:intron | 40.0% | |
| AACATCAACGTCAACAACGT+CGG | - | chr1_2:21587610-21587629 | None:intergenic | 40.0% | |
| CAATCGCAGATGACACAAAA+TGG | - | chr1_2:21587894-21587913 | None:intergenic | 40.0% | |
| ACATTCCTTACCTTACGAGT+CGG | - | chr1_2:21587971-21587990 | None:intergenic | 40.0% | |
| ! | GAAGTGATGGAATGTAACCA+TGG | + | chr1_2:21588134-21588153 | Msa0062290:intron | 40.0% |
| TTGTACGAAACTAACACCCA+TGG | - | chr1_2:21588154-21588173 | None:intergenic | 40.0% | |
| ACATCGACGCTTCAAATTGA+AGG | - | chr1_2:21588214-21588233 | None:intergenic | 40.0% | |
| !! | GTCCTATAAAACTCTAAGGC+TGG | + | chr1_2:21588432-21588451 | Msa0062290:intron | 40.0% |
| ! | CTGCATTTCTTTTGACAGGA+AGG | + | chr1_2:21588901-21588920 | Msa0062290:intron | 40.0% |
| GTGGTTGCAAAGTTCCAAAT+AGG | - | chr1_2:21589449-21589468 | None:intergenic | 40.0% | |
| ! | AAGTCTGCTCTTTTACCACT+AGG | - | chr1_2:21589802-21589821 | None:intergenic | 40.0% |
| ATAGCTCTTCACATTCTTGC+TGG | - | chr1_2:21590053-21590072 | None:intergenic | 40.0% | |
| ! | TAAGCTTTCTGAGGAATGTC+TGG | + | chr1_2:21590128-21590147 | Msa0062290:CDS | 40.0% |
| ! | GATTACCAGTGCCTTTTGCT+GGG | + | chr1_2:21585210-21585229 | Msa0062290:intron | 45.0% |
| TTTCTCGATCTTGATGGGGA+AGG | + | chr1_2:21585979-21585998 | Msa0062290:CDS | 45.0% | |
| AAGGAAGAATCCACTCCGTT+TGG | + | chr1_2:21585998-21586017 | Msa0062290:CDS | 45.0% | |
| !! | TGAGGCACCGTGAAATTGTA+AGG | - | chr1_2:21586028-21586047 | None:intergenic | 45.0% |
| TGCATAGCTGTAGTCCAATG+TGG | - | chr1_2:21586187-21586206 | None:intergenic | 45.0% | |
| ACATTGGACTACAGCTATGC+AGG | + | chr1_2:21586186-21586205 | Msa0062290:CDS | 45.0% | |
| GCTTTCTTAGACTAGGACAG+AGG | + | chr1_2:21586455-21586474 | Msa0062290:intron | 45.0% | |
| GTGAAAGTGAAGCAGATGAC+TGG | - | chr1_2:21586483-21586502 | None:intergenic | 45.0% | |
| CTCACCTCAACAACTATGTG+GGG | - | chr1_2:21586587-21586606 | None:intergenic | 45.0% | |
| GCTCACCTCAACAACTATGT+GGG | - | chr1_2:21586588-21586607 | None:intergenic | 45.0% | |
| TCATATTTCTTCAGGGGGTG+GGG | + | chr1_2:21586712-21586731 | Msa0062290:intron | 45.0% | |
| ! | TTTTGGTCAGCATGCTGCAA+AGG | + | chr1_2:21586847-21586866 | Msa0062290:intron | 45.0% |
| !!! | CATTTTTGGGTGCAGAAGAC+TGG | - | chr1_2:21586988-21587007 | None:intergenic | 45.0% |
| CTTCTGCACCCAAAAATGAC+AGG | + | chr1_2:21586990-21587009 | Msa0062290:CDS | 45.0% | |
| !!! | GGTTCCATCCCTGTCATTTT+TGG | - | chr1_2:21587002-21587021 | None:intergenic | 45.0% |
| !!! | CTGTCATTTTGATCTCCCTC+TGG | - | chr1_2:21587137-21587156 | None:intergenic | 45.0% |
| TGAGCTGCAGTTCATGTCTT+TGG | - | chr1_2:21587497-21587516 | None:intergenic | 45.0% | |
| AAATTCTGAGCCAGACCAGA+TGG | - | chr1_2:21587561-21587580 | None:intergenic | 45.0% | |
| ! | TCTGGTCTGGCTCAGAATTT+AGG | + | chr1_2:21587561-21587580 | Msa0062290:CDS | 45.0% |
| ! | CTGGTCTGGCTCAGAATTTA+GGG | + | chr1_2:21587562-21587581 | Msa0062290:CDS | 45.0% |
| GAATTTAGGGACAGTCGTCA+AGG | + | chr1_2:21587575-21587594 | Msa0062290:CDS | 45.0% | |
| !! | TCTCATAAGACCGACTCGTA+AGG | + | chr1_2:21587958-21587977 | Msa0062290:intron | 45.0% |
| !! | TAAGACCGACTCGTAAGGTA+AGG | + | chr1_2:21587963-21587982 | Msa0062290:intron | 45.0% |
| ACGAGGTAGTGTGGACTTAT+TGG | - | chr1_2:21588043-21588062 | None:intergenic | 45.0% | |
| TGTTGTAACACGAGGTAGTG+TGG | - | chr1_2:21588052-21588071 | None:intergenic | 45.0% | |
| TCCACAACGCTATGCCAAAT+TGG | + | chr1_2:21588628-21588647 | Msa0062290:intron | 45.0% | |
| GGTACATACTAGACCATGAC+TGG | + | chr1_2:21588996-21589015 | Msa0062290:intron | 45.0% | |
| ! | TCTGCTCTTTTACCACTAGG+TGG | - | chr1_2:21589799-21589818 | None:intergenic | 45.0% |
| TCTTCACATTCTTGCTGGCA+AGG | - | chr1_2:21590048-21590067 | None:intergenic | 45.0% | |
| ! | AACGCTTGCTAAGCTTTCTG+AGG | + | chr1_2:21590119-21590138 | Msa0062290:CDS | 45.0% |
| !!! | AATTTTTTTATATAAATATG+TGG | + | chr1_2:21587179-21587198 | Msa0062290:intron | 5.0% |
| !!! | CTATTTTATTAAATTATTAT+TGG | - | chr1_2:21588115-21588134 | None:intergenic | 5.0% |
| ! | GGATTACCAGTGCCTTTTGC+TGG | + | chr1_2:21585209-21585228 | Msa0062290:intron | 50.0% |
| ! | AGATTCCCAGCAAAAGGCAC+TGG | - | chr1_2:21585218-21585237 | None:intergenic | 50.0% |
| ! | TGCCTTTTGCTGGGAATCTG+AGG | + | chr1_2:21585219-21585238 | Msa0062290:intron | 50.0% |
| ! | GCCTTTTGCTGGGAATCTGA+GGG | + | chr1_2:21585220-21585239 | Msa0062290:intron | 50.0% |
| ACCCTCAGATTCCCAGCAAA+AGG | - | chr1_2:21585224-21585243 | None:intergenic | 50.0% | |
| GTAAGGTCTTCCAAACGGAG+TGG | - | chr1_2:21586011-21586030 | None:intergenic | 50.0% | |
| AAGTAAGGAGCAGCTGCAAG+TGG | - | chr1_2:21586370-21586389 | None:intergenic | 50.0% | |
| ! | GCAGGCTGCTTTCTTAGACT+AGG | + | chr1_2:21586448-21586467 | Msa0062290:intron | 50.0% |
| GGTTTATTGGACAGCCTCAC+GGG | - | chr1_2:21586566-21586585 | None:intergenic | 50.0% | |
| GGGTTTATTGGACAGCCTCA+CGG | - | chr1_2:21586567-21586586 | None:intergenic | 50.0% | |
| GGCTCACCTCAACAACTATG+TGG | - | chr1_2:21586589-21586608 | None:intergenic | 50.0% | |
| GCACCCAAAAATGACAGGGA+TGG | + | chr1_2:21586995-21587014 | Msa0062290:CDS | 50.0% | |
| ACAGGGATGGAACCTCAATG+AGG | + | chr1_2:21587008-21587027 | Msa0062290:CDS | 50.0% | |
| TGGAAGCAAGAGATCACCAG+AGG | + | chr1_2:21587118-21587137 | Msa0062290:CDS | 50.0% | |
| GGAAGCAAGAGATCACCAGA+GGG | + | chr1_2:21587119-21587138 | Msa0062290:CDS | 50.0% | |
| AGGAGAATCCTGCCACAGAA+AGG | - | chr1_2:21587343-21587362 | None:intergenic | 50.0% | |
| ! | TGTTGATGGGGCATCTCATG+TGG | - | chr1_2:21588486-21588505 | None:intergenic | 50.0% |
| GCCAATTTGGCATAGCGTTG+TGG | - | chr1_2:21588632-21588651 | None:intergenic | 50.0% | |
| ACAAGATCAGTTGCGCATGC+AGG | - | chr1_2:21588674-21588693 | None:intergenic | 50.0% | |
| ! | GTGCATTGCAGCAGGTTTTG+TGG | + | chr1_2:21589018-21589037 | Msa0062290:intron | 50.0% |
| GCTTAGCAAGCGTTTGTGCT+AGG | - | chr1_2:21590113-21590132 | None:intergenic | 50.0% | |
| AAAGGGGCTTGGAGTAGACC+CGG | - | chr1_2:21586338-21586357 | None:intergenic | 55.0% | |
| ATGCTCTACATGGTCCCGTG+AGG | + | chr1_2:21586549-21586568 | Msa0062290:CDS | 55.0% | |
| ATTTCTTCAGGGGGTGGGGT+TGG | + | chr1_2:21586716-21586735 | Msa0062290:intron | 55.0% | |
| TTTCTTCAGGGGGTGGGGTT+GGG | + | chr1_2:21586717-21586736 | Msa0062290:intron | 55.0% | |
| ! | GTCGATGGGGCATCTCATGT+GGG | - | chr1_2:21588314-21588333 | None:intergenic | 55.0% |
| ! | TGTCGATGGGGCATCTCATG+TGG | - | chr1_2:21588315-21588334 | None:intergenic | 55.0% |
| CTGCTGCAATGCACCAGTCA+TGG | - | chr1_2:21589012-21589031 | None:intergenic | 55.0% | |
| CATGACTGGTGCATTGCAGC+AGG | + | chr1_2:21589010-21589029 | Msa0062290:intron | 55.0% | |
| AAGGGGCTTGGAGTAGACCC+GGG | - | chr1_2:21586337-21586356 | None:intergenic | 60.0% | |
| TTCTTCAGGGGGTGGGGTTG+GGG | + | chr1_2:21586718-21586737 | Msa0062290:intron | 60.0% | |
| TGTGTGCGCAGTGCAGCAAG+TGG | + | chr1_2:21587098-21587117 | Msa0062290:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 21584978 | 21590191 | 21584978 | ID=Msa0062290;Name=Msa0062290 |
| chr1_2 | mRNA | 21584978 | 21590191 | 21584978 | ID=Msa0062290-mRNA-1;Parent=Msa0062290;Name=Msa0062290-mRNA-1;_AED=0.17;_eAED=0.17;_QI=0|1|0.90|1|0.9|0.90|11|0|336 |
| chr1_2 | exon | 21584978 | 21585076 | 21584978 | ID=Msa0062290-mRNA-1:exon:8018;Parent=Msa0062290-mRNA-1 |
| chr1_2 | exon | 21585959 | 21586054 | 21585959 | ID=Msa0062290-mRNA-1:exon:8019;Parent=Msa0062290-mRNA-1 |
| chr1_2 | exon | 21586160 | 21586207 | 21586160 | ID=Msa0062290-mRNA-1:exon:8020;Parent=Msa0062290-mRNA-1 |
| chr1_2 | exon | 21586322 | 21586417 | 21586322 | ID=Msa0062290-mRNA-1:exon:8021;Parent=Msa0062290-mRNA-1 |
| chr1_2 | exon | 21586524 | 21586601 | 21586524 | ID=Msa0062290-mRNA-1:exon:8022;Parent=Msa0062290-mRNA-1 |
| chr1_2 | exon | 21586857 | 21587029 | 21586857 | ID=Msa0062290-mRNA-1:exon:8023;Parent=Msa0062290-mRNA-1 |
| chr1_2 | exon | 21587109 | 21587163 | 21587109 | ID=Msa0062290-mRNA-1:exon:8024;Parent=Msa0062290-mRNA-1 |
| chr1_2 | exon | 21587354 | 21587402 | 21587354 | ID=Msa0062290-mRNA-1:exon:8025;Parent=Msa0062290-mRNA-1 |
| chr1_2 | exon | 21587553 | 21587650 | 21587553 | ID=Msa0062290-mRNA-1:exon:8026;Parent=Msa0062290-mRNA-1 |
| chr1_2 | exon | 21588919 | 21588996 | 21588919 | ID=Msa0062290-mRNA-1:exon:8027;Parent=Msa0062290-mRNA-1 |
| chr1_2 | exon | 21590054 | 21590191 | 21590054 | ID=Msa0062290-mRNA-1:exon:8028;Parent=Msa0062290-mRNA-1 |
| chr1_2 | CDS | 21584978 | 21585076 | 21584978 | ID=Msa0062290-mRNA-1:cds;Parent=Msa0062290-mRNA-1 |
| chr1_2 | CDS | 21585959 | 21586054 | 21585959 | ID=Msa0062290-mRNA-1:cds;Parent=Msa0062290-mRNA-1 |
| chr1_2 | CDS | 21586160 | 21586207 | 21586160 | ID=Msa0062290-mRNA-1:cds;Parent=Msa0062290-mRNA-1 |
| chr1_2 | CDS | 21586322 | 21586417 | 21586322 | ID=Msa0062290-mRNA-1:cds;Parent=Msa0062290-mRNA-1 |
| chr1_2 | CDS | 21586524 | 21586601 | 21586524 | ID=Msa0062290-mRNA-1:cds;Parent=Msa0062290-mRNA-1 |
| chr1_2 | CDS | 21586857 | 21587029 | 21586857 | ID=Msa0062290-mRNA-1:cds;Parent=Msa0062290-mRNA-1 |
| chr1_2 | CDS | 21587109 | 21587163 | 21587109 | ID=Msa0062290-mRNA-1:cds;Parent=Msa0062290-mRNA-1 |
| chr1_2 | CDS | 21587354 | 21587402 | 21587354 | ID=Msa0062290-mRNA-1:cds;Parent=Msa0062290-mRNA-1 |
| chr1_2 | CDS | 21587553 | 21587650 | 21587553 | ID=Msa0062290-mRNA-1:cds;Parent=Msa0062290-mRNA-1 |
| chr1_2 | CDS | 21588919 | 21588996 | 21588919 | ID=Msa0062290-mRNA-1:cds;Parent=Msa0062290-mRNA-1 |
| chr1_2 | CDS | 21590054 | 21590191 | 21590054 | ID=Msa0062290-mRNA-1:cds;Parent=Msa0062290-mRNA-1 |
| Gene Sequence |
| Protein sequence |
