Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0062360 | QSD99880.1 | 63.303 | 109 | 32 | 1 | 1 | 101 | 1 | 109 | 1.88e-39 | 144 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0062360 | sp|O49255|NAC29_ARATH | 28.293 | 205 | 113 | 9 | 4 | 181 | 9 | 206 | 3.30e-15 | 77.0 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0062360 | A0A896WD20 | 63.303 | 109 | 32 | 1 | 1 | 101 | 1 | 109 | 8.97e-40 | 144 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0062360 | TF | NAC |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0062360 | MtrunA17_Chr4g0050701 | 31.694 | 183 | 100 | 7 | 4 | 168 | 11 | 186 | 2.32e-18 | 81.3 |
| Msa0062360 | MtrunA17_Chr6g0481091 | 31.818 | 176 | 83 | 8 | 4 | 158 | 6 | 165 | 2.53e-17 | 79.3 |
| Msa0062360 | MtrunA17_Chr2g0326361 | 33.939 | 165 | 81 | 8 | 4 | 146 | 14 | 172 | 4.17e-16 | 77.4 |
| Msa0062360 | MtrunA17_Chr4g0056541 | 32.692 | 156 | 80 | 6 | 4 | 140 | 7 | 156 | 4.55e-16 | 77.4 |
| Msa0062360 | MtrunA17_Chr7g0263931 | 27.426 | 237 | 124 | 9 | 4 | 218 | 11 | 221 | 1.78e-15 | 75.5 |
| Msa0062360 | MtrunA17_Chr8g0384721 | 32.704 | 159 | 78 | 8 | 4 | 140 | 7 | 158 | 3.24e-15 | 74.3 |
| Msa0062360 | MtrunA17_Chr4g0042561 | 30.723 | 166 | 86 | 8 | 4 | 146 | 9 | 168 | 5.68e-15 | 73.6 |
| Msa0062360 | MtrunA17_Chr5g0405211 | 32.484 | 157 | 81 | 7 | 4 | 141 | 8 | 158 | 2.55e-14 | 72.4 |
| Msa0062360 | MtrunA17_Chr2g0318101 | 31.847 | 157 | 89 | 6 | 4 | 147 | 15 | 166 | 3.00e-14 | 72.0 |
| Msa0062360 | MtrunA17_Chr8g0372121 | 33.974 | 156 | 78 | 8 | 4 | 140 | 6 | 155 | 3.51e-14 | 71.6 |
| Msa0062360 | MtrunA17_Chr2g0318081 | 28.824 | 170 | 95 | 7 | 4 | 154 | 16 | 178 | 7.51e-14 | 70.9 |
| Msa0062360 | MtrunA17_Chr8g0345731 | 31.169 | 154 | 86 | 5 | 2 | 137 | 22 | 173 | 1.12e-13 | 67.8 |
| Msa0062360 | MtrunA17_Chr4g0017921 | 30.636 | 173 | 96 | 8 | 4 | 158 | 8 | 174 | 1.42e-13 | 70.1 |
| Msa0062360 | MtrunA17_Chr1g0200561 | 31.481 | 162 | 83 | 8 | 1 | 140 | 13 | 168 | 1.97e-13 | 69.7 |
| Msa0062360 | MtrunA17_Chr1g0183741 | 32.903 | 155 | 82 | 8 | 4 | 143 | 10 | 157 | 2.21e-13 | 68.9 |
| Msa0062360 | MtrunA17_Chr8g0359921 | 30.189 | 159 | 83 | 7 | 4 | 141 | 14 | 165 | 2.42e-13 | 69.3 |
| Msa0062360 | MtrunA17_Chr7g0214071 | 32.026 | 153 | 85 | 7 | 4 | 142 | 15 | 162 | 2.91e-13 | 68.2 |
| Msa0062360 | MtrunA17_Chr5g0433781 | 31.013 | 158 | 81 | 8 | 4 | 140 | 6 | 156 | 4.13e-13 | 69.3 |
| Msa0062360 | MtrunA17_Chr4g0047841 | 32.331 | 133 | 75 | 4 | 4 | 125 | 15 | 143 | 5.34e-13 | 68.6 |
| Msa0062360 | MtrunA17_Chr7g0261411 | 33.333 | 150 | 80 | 7 | 4 | 138 | 10 | 154 | 5.86e-13 | 67.8 |
| Msa0062360 | MtrunA17_Chr3g0124761 | 29.747 | 158 | 83 | 7 | 4 | 140 | 7 | 157 | 5.99e-13 | 67.8 |
| Msa0062360 | MtrunA17_Chr4g0076731 | 32.692 | 156 | 82 | 9 | 2 | 140 | 52 | 201 | 7.32e-13 | 68.6 |
| Msa0062360 | MtrunA17_Chr2g0309331 | 30.769 | 156 | 84 | 6 | 4 | 140 | 10 | 160 | 8.00e-13 | 67.8 |
| Msa0062360 | MtrunA17_Chr3g0128111 | 27.848 | 158 | 82 | 8 | 7 | 141 | 45 | 193 | 1.06e-12 | 66.6 |
| Msa0062360 | MtrunA17_Chr6g0484441 | 32.026 | 153 | 82 | 7 | 4 | 140 | 5 | 151 | 1.43e-12 | 67.0 |
| Msa0062360 | MtrunA17_Chr3g0139331 | 29.677 | 155 | 89 | 6 | 2 | 140 | 9 | 159 | 2.83e-12 | 66.2 |
| Msa0062360 | MtrunA17_Chr8g0384201 | 30.380 | 158 | 84 | 7 | 4 | 141 | 6 | 157 | 3.19e-12 | 66.6 |
| Msa0062360 | MtrunA17_Chr3g0128151 | 26.042 | 192 | 110 | 8 | 1 | 169 | 19 | 201 | 5.07e-12 | 66.2 |
| Msa0062360 | MtrunA17_Chr5g0400461 | 25.121 | 207 | 125 | 9 | 4 | 185 | 6 | 207 | 5.42e-12 | 65.5 |
| Msa0062360 | MtrunA17_Chr3g0131911 | 30.488 | 164 | 84 | 8 | 4 | 142 | 14 | 172 | 2.15e-11 | 62.8 |
| Msa0062360 | MtrunA17_Chr4g0054791 | 29.375 | 160 | 86 | 8 | 4 | 141 | 6 | 160 | 2.32e-11 | 63.5 |
| Msa0062360 | MtrunA17_Chr8g0345671 | 28.477 | 151 | 85 | 6 | 4 | 137 | 11 | 155 | 2.89e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0062360 | AT2G24430.2 | 35.897 | 156 | 79 | 7 | 2 | 140 | 14 | 165 | 1.98e-17 | 81.3 |
| Msa0062360 | AT2G24430.1 | 35.897 | 156 | 79 | 7 | 2 | 140 | 14 | 165 | 1.98e-17 | 81.3 |
| Msa0062360 | AT3G17730.1 | 32.704 | 159 | 79 | 8 | 4 | 141 | 6 | 157 | 1.15e-16 | 78.2 |
| Msa0062360 | AT1G69490.1 | 28.293 | 205 | 113 | 9 | 4 | 181 | 9 | 206 | 3.36e-16 | 77.0 |
| Msa0062360 | AT3G10490.1 | 31.646 | 158 | 81 | 6 | 4 | 140 | 27 | 178 | 7.15e-16 | 75.9 |
| Msa0062360 | AT4G27410.2 | 30.818 | 159 | 84 | 7 | 4 | 143 | 14 | 165 | 1.17e-15 | 76.3 |
| Msa0062360 | AT3G10490.2 | 31.447 | 159 | 82 | 6 | 4 | 141 | 27 | 179 | 2.55e-15 | 76.3 |
| Msa0062360 | AT5G08790.1 | 32.143 | 168 | 84 | 8 | 4 | 148 | 7 | 167 | 2.58e-15 | 75.1 |
| Msa0062360 | AT1G76420.1 | 33.121 | 157 | 78 | 7 | 4 | 140 | 22 | 171 | 2.62e-15 | 75.5 |
| Msa0062360 | AT3G10480.1 | 31.646 | 158 | 81 | 6 | 4 | 140 | 27 | 178 | 6.01e-15 | 75.1 |
| Msa0062360 | AT1G54330.1 | 31.818 | 154 | 82 | 7 | 4 | 140 | 6 | 153 | 7.19e-15 | 73.9 |
| Msa0062360 | AT5G64530.1 | 31.937 | 191 | 94 | 8 | 4 | 168 | 3 | 183 | 9.13e-15 | 71.6 |
| Msa0062360 | AT5G63790.1 | 32.121 | 165 | 82 | 8 | 4 | 145 | 50 | 207 | 1.07e-14 | 73.6 |
| Msa0062360 | AT5G63790.2 | 32.121 | 165 | 82 | 8 | 4 | 145 | 60 | 217 | 1.18e-14 | 73.6 |
| Msa0062360 | AT5G39610.1 | 33.121 | 157 | 79 | 8 | 4 | 140 | 20 | 170 | 1.35e-14 | 72.8 |
| Msa0062360 | AT3G10480.2 | 31.210 | 157 | 82 | 6 | 4 | 140 | 27 | 177 | 1.69e-14 | 73.9 |
| Msa0062360 | AT1G26870.1 | 27.468 | 233 | 133 | 8 | 2 | 203 | 14 | 241 | 2.98e-14 | 72.8 |
| Msa0062360 | AT2G18060.3 | 31.210 | 157 | 83 | 6 | 4 | 141 | 9 | 159 | 3.92e-14 | 72.4 |
| Msa0062360 | AT2G18060.1 | 31.210 | 157 | 83 | 6 | 4 | 141 | 9 | 159 | 3.92e-14 | 72.4 |
| Msa0062360 | AT5G66300.1 | 30.573 | 157 | 83 | 6 | 4 | 140 | 12 | 162 | 6.50e-14 | 70.9 |
| Msa0062360 | AT4G28530.1 | 31.176 | 170 | 89 | 5 | 4 | 146 | 10 | 178 | 6.71e-14 | 71.6 |
| Msa0062360 | AT5G61430.1 | 32.500 | 160 | 82 | 8 | 4 | 143 | 16 | 169 | 1.88e-13 | 70.1 |
| Msa0062360 | AT1G01720.1 | 31.447 | 159 | 80 | 8 | 4 | 140 | 7 | 158 | 2.08e-13 | 69.7 |
| Msa0062360 | AT3G18400.1 | 32.468 | 154 | 81 | 9 | 4 | 140 | 5 | 152 | 4.40e-13 | 68.9 |
| Msa0062360 | AT1G32510.1 | 28.485 | 165 | 86 | 7 | 3 | 140 | 5 | 164 | 4.45e-13 | 68.6 |
| Msa0062360 | AT1G52890.1 | 31.250 | 160 | 78 | 8 | 4 | 141 | 14 | 163 | 4.54e-13 | 68.9 |
| Msa0062360 | AT5G13180.1 | 29.221 | 154 | 91 | 5 | 4 | 143 | 14 | 163 | 4.66e-13 | 68.2 |
| Msa0062360 | AT2G33480.1 | 32.258 | 155 | 82 | 7 | 4 | 142 | 15 | 162 | 5.16e-13 | 68.2 |
| Msa0062360 | AT5G22290.1 | 29.655 | 145 | 83 | 6 | 6 | 137 | 23 | 161 | 5.29e-13 | 68.9 |
| Msa0062360 | AT4G10350.1 | 32.051 | 156 | 79 | 8 | 4 | 138 | 9 | 158 | 7.06e-13 | 68.6 |
| Msa0062360 | AT5G46590.1 | 30.769 | 156 | 80 | 7 | 4 | 137 | 6 | 155 | 7.21e-13 | 68.2 |
| Msa0062360 | AT3G29035.1 | 34.848 | 132 | 69 | 6 | 4 | 124 | 24 | 149 | 9.21e-13 | 67.8 |
| Msa0062360 | AT5G07680.2 | 32.919 | 161 | 80 | 9 | 4 | 143 | 3 | 156 | 1.04e-12 | 67.8 |
| Msa0062360 | AT5G07680.1 | 32.919 | 161 | 80 | 9 | 4 | 143 | 17 | 170 | 1.13e-12 | 67.8 |
| Msa0062360 | AT5G04395.1 | 31.544 | 149 | 73 | 5 | 4 | 127 | 28 | 172 | 1.81e-12 | 65.1 |
| Msa0062360 | AT1G79580.3 | 30.968 | 155 | 84 | 6 | 4 | 140 | 17 | 166 | 3.04e-12 | 66.6 |
| Msa0062360 | AT1G79580.5 | 30.968 | 155 | 84 | 6 | 4 | 140 | 17 | 166 | 3.04e-12 | 66.6 |
| Msa0062360 | AT1G79580.4 | 30.968 | 155 | 84 | 6 | 4 | 140 | 17 | 166 | 3.04e-12 | 66.6 |
| Msa0062360 | AT1G79580.2 | 30.968 | 155 | 84 | 6 | 4 | 140 | 17 | 166 | 3.04e-12 | 66.6 |
| Msa0062360 | AT1G79580.1 | 30.968 | 155 | 84 | 6 | 4 | 140 | 17 | 166 | 3.04e-12 | 66.6 |
| Msa0062360 | AT2G43000.1 | 29.870 | 154 | 83 | 6 | 6 | 140 | 20 | 167 | 3.14e-12 | 65.9 |
| Msa0062360 | AT2G02450.1 | 30.323 | 155 | 85 | 8 | 3 | 140 | 50 | 198 | 3.81e-12 | 66.6 |
| Msa0062360 | AT1G61110.1 | 34.074 | 135 | 71 | 6 | 4 | 126 | 16 | 144 | 4.55e-12 | 65.9 |
| Msa0062360 | AT2G02450.2 | 30.323 | 155 | 85 | 8 | 3 | 140 | 50 | 198 | 4.65e-12 | 66.2 |
| Msa0062360 | AT3G10500.1 | 30.573 | 157 | 83 | 6 | 4 | 140 | 9 | 159 | 4.75e-12 | 66.6 |
| Msa0062360 | AT5G50820.1 | 33.846 | 130 | 75 | 5 | 4 | 127 | 17 | 141 | 5.97e-12 | 63.9 |
| Msa0062360 | AT5G39820.1 | 32.836 | 134 | 75 | 5 | 2 | 124 | 18 | 147 | 6.69e-12 | 65.5 |
| Msa0062360 | AT5G04410.1 | 28.662 | 157 | 86 | 6 | 4 | 140 | 9 | 159 | 1.01e-11 | 65.5 |
| Msa0062360 | AT3G12977.1 | 28.049 | 164 | 92 | 7 | 4 | 147 | 18 | 175 | 2.85e-11 | 63.2 |
Find 71 sgRNAs with CRISPR-Local
Find 566 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGGATCTGGACTTTGAATT+TGG | 0.132617 | 1_2:+21733748 | Msa0062360:CDS |
| TGGATCTAGACTCTGAATTT+AGG | 0.202686 | 1_2:+21742301 | Msa0062360:CDS |
| GGCATTGTAAGACTGGATTT+TGG | 0.240614 | 1_2:+21733421 | Msa0062360:CDS |
| CCATGGTTCTGACCTGATTA+AGG | 0.246294 | 1_2:+21733287 | Msa0062360:CDS |
| CCGTTTGAATTGCATCTTGC+TGG | 0.261249 | 1_2:+21733333 | Msa0062360:CDS |
| TGGATCTGGACTTTGAATTT+GGG | 0.284440 | 1_2:+21733749 | Msa0062360:CDS |
| CCTCCTCAGCTCATCACTTT+TGG | 0.293515 | 1_2:-21733400 | None:intergenic |
| GAAGGAACTCAGCAACTTAA+AGG | 0.294305 | 1_2:+21742384 | Msa0062360:CDS |
| ACAGGTTTAGCTCCTTAATC+AGG | 0.372764 | 1_2:-21733299 | None:intergenic |
| GGATCTAGACTCTGAATTTA+GGG | 0.380988 | 1_2:+21742302 | Msa0062360:CDS |
| TGAAGGAACTCAACAACTTA+AGG | 0.384542 | 1_2:+21733831 | Msa0062360:CDS |
| GCAATTCAAACGGATCATAT+TGG | 0.403266 | 1_2:-21733323 | None:intergenic |
| TCTAGTGATGGTGCTGGTGC+TGG | 0.412235 | 1_2:+21742420 | Msa0062360:CDS |
| AGTCCAGATCCATCCCTCTA+TGG | 0.422416 | 1_2:-21733738 | None:intergenic |
| CGTTTGAATTGCATCTTGCT+GGG | 0.435164 | 1_2:+21733334 | Msa0062360:CDS |
| AAAACACGGCAAACAACAAA+AGG | 0.449123 | 1_2:-21742261 | None:intergenic |
| CAAACGGATCATATTGGTAC+AGG | 0.462188 | 1_2:-21733317 | None:intergenic |
| CTCAGCAACTTAAAGGAGCT+GGG | 0.464776 | 1_2:+21742391 | Msa0062360:CDS |
| AGGCGATGCATCCCGTTTCA+TGG | 0.469378 | 1_2:+21742452 | Msa0062360:CDS |
| CTGAGGAGGCATTGTAAGAC+TGG | 0.469451 | 1_2:+21733414 | Msa0062360:CDS |
| ACTCAGCAACTTAAAGGAGC+TGG | 0.470641 | 1_2:+21742390 | Msa0062360:CDS |
| GGCTACTCAAGCCACTCTTT+AGG | 0.473252 | 1_2:+21742473 | Msa0062360:CDS |
| GAAGGAACTCAACAACTTAA+GGG | 0.473282 | 1_2:+21733832 | Msa0062360:CDS |
| CCGCCATAGAGGGATGGATC+TGG | 0.473585 | 1_2:+21733735 | Msa0062360:CDS |
| GTCGATGAAGGTGATGTTGC+TGG | 0.479369 | 1_2:+21733784 | Msa0062360:CDS |
| GGATCTGGACTTTGAATTTG+GGG | 0.498437 | 1_2:+21733750 | Msa0062360:CDS |
| TGGCTTGAGTAGCCATGAAA+CGG | 0.501686 | 1_2:-21742464 | None:intergenic |
| GAGTCTAGATCCATCCCTCT+AGG | 0.503882 | 1_2:-21742291 | None:intergenic |
| GGCTTGAGTAGCCATGAAAC+GGG | 0.506923 | 1_2:-21742463 | None:intergenic |
| GAAGAAGTTCAAAATTTCCA+TGG | 0.507513 | 1_2:+21733270 | Msa0062360:CDS |
| TCTGATGAGCAGGCGAATGA+AGG | 0.516658 | 1_2:+21733814 | Msa0062360:CDS |
| AGAACGCAATCAAAACTAGT+TGG | 0.520035 | 1_2:+21733541 | Msa0062360:CDS |
| TGGTGACGACTCTGATGAGC+AGG | 0.523906 | 1_2:+21733804 | Msa0062360:CDS |
| TCTAATGACAAGGCGAATGA+AGG | 0.530095 | 1_2:+21742366 | Msa0062360:CDS |
| GATTTGCTTCCACCTGGTGT+TGG | 0.532322 | 1_2:+21733192 | Msa0062360:CDS |
| ACCTTCATCGACATCAGATA+AGG | 0.533255 | 1_2:-21733773 | None:intergenic |
| ACCTTCATCTACATTAGATA+AGG | 0.537868 | 1_2:-21742325 | None:intergenic |
| ACTAGTTCTAGTGTTGATGC+TGG | 0.545733 | 1_2:+21733862 | Msa0062360:CDS |
| AGAACGCGATCAAAACTAGC+TGG | 0.546737 | 1_2:+21742093 | Msa0062360:CDS |
| CACTCTTGTTAACAACCCTC+AGG | 0.546751 | 1_2:+21733578 | Msa0062360:CDS |
| CACTCTTGTTAACAACCCTC+AGG | 0.546751 | 1_2:+21742130 | Msa0062360:CDS |
| GCCTTATCTAATGTAGATGA+AGG | 0.548985 | 1_2:+21742324 | Msa0062360:CDS |
| GCTAGTTCTAGTGATGGTGC+TGG | 0.549559 | 1_2:+21742414 | Msa0062360:CDS |
| TGGAGCTGATGACGTGTTGG+TGG | 0.553560 | 1_2:+21733476 | Msa0062360:CDS |
| GCAATGGATTTGCTTCCACC+TGG | 0.553681 | 1_2:+21733186 | None:intergenic |
| CCAGCAAGATGCAATTCAAA+CGG | 0.554864 | 1_2:-21733333 | None:intergenic |
| CCAAAAGTGATGAGCTGAGG+AGG | 0.564041 | 1_2:+21733400 | Msa0062360:CDS |
| AGTCTAGATCCATCCCTCTA+GGG | 0.568853 | 1_2:-21742290 | None:intergenic |
| GCTGGTGCTGGTGTTGAGCA+AGG | 0.580655 | 1_2:+21742432 | Msa0062360:CDS |
| AAGGAACTCAACAACTTAAG+GGG | 0.586043 | 1_2:+21733833 | Msa0062360:CDS |
| TGGATGCAGATGGGAGATGT+CGG | 0.586450 | 1_2:+21733441 | Msa0062360:CDS |
| GCCTTATCTGATGTCGATGA+AGG | 0.589295 | 1_2:+21733772 | Msa0062360:CDS |
| GATGTCGGAGACATTACTGT+TGG | 0.593815 | 1_2:+21733456 | Msa0062360:CDS |
| GCTGGGGCTAGTTCTAGTGA+TGG | 0.604683 | 1_2:+21742408 | Msa0062360:CDS |
| GTTGATGCTGGTGCTGAGCA+AGG | 0.613426 | 1_2:+21733874 | Msa0062360:CDS |
| TGTTGGAGCTGATGACGTGT+TGG | 0.619893 | 1_2:+21733473 | Msa0062360:CDS |
| AACATATGTTACCTAAAGAG+TGG | 0.623614 | 1_2:-21742484 | None:intergenic |
| CCTTAATCAGGTCAGAACCA+TGG | 0.626777 | 1_2:-21733287 | None:intergenic |
| GTAGATGAAGGTGATGCTGC+TGG | 0.627007 | 1_2:+21742336 | Msa0062360:CDS |
| TGGCAAGGTAGTAGCTAACA+AGG | 0.628366 | 1_2:-21733236 | None:intergenic |
| TAACAAGGAGTTCATCAGAA+GGG | 0.633655 | 1_2:-21733221 | None:intergenic |
| CTGCCAAAAGTGATGAGCTG+AGG | 0.648920 | 1_2:+21733397 | Msa0062360:CDS |
| TCAGCAACTTAAAGGAGCTG+GGG | 0.650588 | 1_2:+21742392 | Msa0062360:CDS |
| GGAGCTGATGACGTGTTGGT+GGG | 0.656135 | 1_2:+21733477 | Msa0062360:CDS |
| GGGACGAAACCAACACCAGG+TGG | 0.656589 | 1_2:-21733201 | None:intergenic |
| TGGTGACGACTCTAATGACA+AGG | 0.670407 | 1_2:+21742356 | Msa0062360:CDS |
| CTAACAAGGAGTTCATCAGA+AGG | 0.675712 | 1_2:-21733222 | None:intergenic |
| AGGAACTCAACAACTTAAGG+GGG | 0.684501 | 1_2:+21733834 | Msa0062360:CDS |
| GAAGGGACGAAACCAACACC+AGG | 0.689839 | 1_2:-21733204 | None:intergenic |
| CCAGATCCATCCCTCTATGG+CGG | 0.691442 | 1_2:-21733735 | None:intergenic |
| CTAGATCCATCCCTCTAGGG+CGG | 0.699070 | 1_2:-21742287 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTTATAATTTTATTTTTT+TGG | + | chr1_2:21738885-21738904 | Msa0062360:intron | 0.0% |
| !! | TTTAATATAAATAATTGTGT+AGG | + | chr1_2:21733684-21733703 | Msa0062360:intron | 10.0% |
| !! | TCAAAAATTATGTTTAATTA+CGG | + | chr1_2:21734242-21734261 | Msa0062360:intron | 10.0% |
| !!! | TTAATTTATAACATGTTTTA+AGG | - | chr1_2:21734452-21734471 | None:intergenic | 10.0% |
| !! | AAACTTAAAGAAAAATAAAA+AGG | - | chr1_2:21734519-21734538 | None:intergenic | 10.0% |
| !! | TAAAAAGTTATTGAAAAATT+GGG | - | chr1_2:21735912-21735931 | None:intergenic | 10.0% |
| !! | TTAAAAAGTTATTGAAAAAT+TGG | - | chr1_2:21735913-21735932 | None:intergenic | 10.0% |
| !! | ATTGTAATAAAATTGTAATT+TGG | - | chr1_2:21737141-21737160 | None:intergenic | 10.0% |
| !!! | AAGTCATTTTAAATATTTTT+TGG | - | chr1_2:21737278-21737297 | None:intergenic | 10.0% |
| !! | TAAATTATTATTAATAACAG+TGG | - | chr1_2:21738871-21738890 | None:intergenic | 10.0% |
| !! | GTATAAATATATATAACTTA+CGG | - | chr1_2:21738984-21739003 | None:intergenic | 10.0% |
| !!! | TTAAACTTTTTAAATGATAA+AGG | - | chr1_2:21739164-21739183 | None:intergenic | 10.0% |
| !!! | TTTTTTTTTTGTTATATTGT+TGG | + | chr1_2:21739306-21739325 | Msa0062360:intron | 10.0% |
| !!! | GATAAAAATTCTTTTTTTTT+TGG | + | chr1_2:21739691-21739710 | Msa0062360:intron | 10.0% |
| !!! | ACGTTAAATATTAATTTTTA+GGG | - | chr1_2:21739999-21740018 | None:intergenic | 10.0% |
| !!! | AACGTTAAATATTAATTTTT+AGG | - | chr1_2:21740000-21740019 | None:intergenic | 10.0% |
| !!! | TTTTTTTTTTTTTTTACAGA+AGG | - | chr1_2:21740242-21740261 | None:intergenic | 10.0% |
| !!! | GTATTTTAACAATTTATAAT+TGG | - | chr1_2:21740417-21740436 | None:intergenic | 10.0% |
| !!! | ATTCATCTTTTTTTTTTTTT+TGG | - | chr1_2:21741051-21741070 | None:intergenic | 10.0% |
| !!! | ATTAATTTTTTTTGGTATAA+TGG | - | chr1_2:21741389-21741408 | None:intergenic | 10.0% |
| !!! | GGATAAAAATTAATTTTTTT+TGG | - | chr1_2:21741397-21741416 | None:intergenic | 10.0% |
| !!! | TATTTTTCTTTAAGTTTTTG+TGG | + | chr1_2:21734522-21734541 | Msa0062360:intron | 15.0% |
| !!! | CTGATCTTATTTAAATTTAT+TGG | + | chr1_2:21734780-21734799 | Msa0062360:intron | 15.0% |
| !! | TTATGAATACAAATGTTTAA+GGG | - | chr1_2:21734850-21734869 | None:intergenic | 15.0% |
| !! | ATTATGAATACAAATGTTTA+AGG | - | chr1_2:21734851-21734870 | None:intergenic | 15.0% |
| !! | TTAAACATTTGTATTCATAA+TGG | + | chr1_2:21734850-21734869 | Msa0062360:intron | 15.0% |
| !!! | TTTTAAAAAGTTTATTAGTC+AGG | - | chr1_2:21735226-21735245 | None:intergenic | 15.0% |
| !!! | CTTTTTAAAAAACTTTCATT+TGG | + | chr1_2:21735236-21735255 | Msa0062360:intron | 15.0% |
| !! | AAAAAGTTATTGAAAAATTG+GGG | - | chr1_2:21735911-21735930 | None:intergenic | 15.0% |
| !! | TACAAAAACAAATATTAAGA+AGG | - | chr1_2:21736008-21736027 | None:intergenic | 15.0% |
| !! | AATAGCAAAGTAAAAAATTA+TGG | + | chr1_2:21736377-21736396 | Msa0062360:intron | 15.0% |
| !! | ATAAATATTCTGATATTTGT+TGG | - | chr1_2:21736409-21736428 | None:intergenic | 15.0% |
| !! | ATCATAATCAAAACAAAAAA+GGG | - | chr1_2:21736739-21736758 | None:intergenic | 15.0% |
| !! | AATCATAATCAAAACAAAAA+AGG | - | chr1_2:21736740-21736759 | None:intergenic | 15.0% |
| !! | CATATATGAATGAAAATTAT+CGG | - | chr1_2:21736831-21736850 | None:intergenic | 15.0% |
| !! | AAATTAAGTATGACAAAATT+TGG | - | chr1_2:21737391-21737410 | None:intergenic | 15.0% |
| !!! | AGTAAAAACATTTTTATAAG+TGG | + | chr1_2:21737726-21737745 | Msa0062360:intron | 15.0% |
| !!! | TTTTTTTTTTAAGCAAAAAG+AGG | + | chr1_2:21737812-21737831 | Msa0062360:intron | 15.0% |
| !! | AAAAAGAAAGCAAAAAAAAA+AGG | + | chr1_2:21738054-21738073 | Msa0062360:intron | 15.0% |
| !! | AAAAGAAAGCAAAAAAAAAA+GGG | + | chr1_2:21738055-21738074 | Msa0062360:intron | 15.0% |
| !! | GAAAATAAAAAAATTGAAAC+TGG | + | chr1_2:21738943-21738962 | Msa0062360:intron | 15.0% |
| !! | TAAATGATAAAGGAAAAAAT+TGG | - | chr1_2:21739154-21739173 | None:intergenic | 15.0% |
| !!! | AAATAAAAAGTTGTTGTTTA+CGG | - | chr1_2:21739237-21739256 | None:intergenic | 15.0% |
| !!! | CAAAAAACATTTATTTTTGA+AGG | + | chr1_2:21739380-21739399 | Msa0062360:intron | 15.0% |
| !! | AAAAAATAAATATCCCAAAA+TGG | - | chr1_2:21739654-21739673 | None:intergenic | 15.0% |
| !!! | ATTTTTTAGACATTTCTTTT+TGG | + | chr1_2:21739667-21739686 | Msa0062360:intron | 15.0% |
| !! | ATAAAAAAAAATCCGTAAAA+TGG | - | chr1_2:21739819-21739838 | None:intergenic | 15.0% |
| !!! | TTTGGGAATAATTTTTTTTT+TGG | + | chr1_2:21739848-21739867 | Msa0062360:intron | 15.0% |
| !!! | TTAAATATTAATTTTTAGGG+GGG | - | chr1_2:21739996-21740015 | None:intergenic | 15.0% |
| !!! | GTTAAATATTAATTTTTAGG+GGG | - | chr1_2:21739997-21740016 | None:intergenic | 15.0% |
| !!! | CGTTAAATATTAATTTTTAG+GGG | - | chr1_2:21739998-21740017 | None:intergenic | 15.0% |
| !! | TAATTTATTTACTAATGACT+AGG | - | chr1_2:21740212-21740231 | None:intergenic | 15.0% |
| !! | TAGTCATTAGTAAATAAATT+AGG | + | chr1_2:21740211-21740230 | Msa0062360:intron | 15.0% |
| !! | AGTCATTAGTAAATAAATTA+GGG | + | chr1_2:21740212-21740231 | Msa0062360:intron | 15.0% |
| !! | GCAATTAGTAAATAAATTAT+TGG | - | chr1_2:21740781-21740800 | None:intergenic | 15.0% |
| !! | TAATTTATTTACTAATTGCT+AGG | + | chr1_2:21740782-21740801 | Msa0062360:intron | 15.0% |
| !!! | TATAAGTTACTTTTGAAATA+AGG | - | chr1_2:21741028-21741047 | None:intergenic | 15.0% |
| !! | AAAAAAAATATATCCCAAAA+AGG | + | chr1_2:21741097-21741116 | Msa0062360:intron | 15.0% |
| !!! | AATTAATTTTTATCCGAAAA+AGG | + | chr1_2:21741402-21741421 | Msa0062360:intron | 15.0% |
| !! | TCAATGATTAATTAATGTAT+TGG | + | chr1_2:21742197-21742216 | Msa0062360:intron | 15.0% |
| !! | TCGATGATTAATATATGTAT+TGG | + | chr1_2:21733645-21733664 | Msa0062360:intron | 20.0% |
| !!! | AATATATTTTACCTGAAAAG+TGG | - | chr1_2:21733929-21733948 | None:intergenic | 20.0% |
| !! | CATAAAAATCATTGATATTG+TGG | - | chr1_2:21734056-21734075 | None:intergenic | 20.0% |
| !!! | TATTACCAACTTTTAAATCA+TGG | + | chr1_2:21734080-21734099 | Msa0062360:intron | 20.0% |
| !!! | CATAATTTTTGATACAATTG+TGG | - | chr1_2:21734234-21734253 | None:intergenic | 20.0% |
| !! | TTAATTACGGAAATCAATAT+TGG | + | chr1_2:21734255-21734274 | Msa0062360:intron | 20.0% |
| !! | GTTTGATATTGATATTTATC+AGG | + | chr1_2:21734655-21734674 | Msa0062360:intron | 20.0% |
| !! | ATTGAGTTATACGTAAATAT+TGG | + | chr1_2:21735081-21735100 | Msa0062360:intron | 20.0% |
| !!! | TTTCAACATGCTATTTATAA+AGG | + | chr1_2:21735113-21735132 | Msa0062360:intron | 20.0% |
| !!! | TTCAACATGCTATTTATAAA+GGG | + | chr1_2:21735114-21735133 | Msa0062360:intron | 20.0% |
| !! | ATTAACCTTCAGAAATAAAT+AGG | + | chr1_2:21735431-21735450 | Msa0062360:intron | 20.0% |
| !!! | ATTTTAACAAACCACAATAA+TGG | - | chr1_2:21735592-21735611 | None:intergenic | 20.0% |
| !!! | GATTTTTTTAAACCATTTGT+AGG | + | chr1_2:21735616-21735635 | Msa0062360:intron | 20.0% |
| !! | CCACATAATTATATTATGAA+TGG | - | chr1_2:21736140-21736159 | None:intergenic | 20.0% |
| !! | CCATTCATAATATAATTATG+TGG | + | chr1_2:21736137-21736156 | Msa0062360:intron | 20.0% |
| !!! | TTTTTGGAAGTTATATTTCA+GGG | + | chr1_2:21736255-21736274 | Msa0062360:intron | 20.0% |
| !! | TAATTCTGAATATGTAAACA+TGG | - | chr1_2:21736478-21736497 | None:intergenic | 20.0% |
| !!! | TGTTTTGATTATGATTATGA+AGG | + | chr1_2:21736744-21736763 | Msa0062360:intron | 20.0% |
| !!! | ATTAACTTGACATATCATAA+TGG | - | chr1_2:21737225-21737244 | None:intergenic | 20.0% |
| !!! | TACTAATACTAAATTTTGCA+AGG | + | chr1_2:21737299-21737318 | Msa0062360:intron | 20.0% |
| !! | AAATCTTCTAATCATATACT+AGG | - | chr1_2:21737346-21737365 | None:intergenic | 20.0% |
| !!! | AAAATTTGGAATCTATGTAT+GGG | - | chr1_2:21737377-21737396 | None:intergenic | 20.0% |
| !! | TCATAAAAAAATATTGGTCA+TGG | + | chr1_2:21737625-21737644 | Msa0062360:intron | 20.0% |
| !! | ACCTTATTATATCAGTAATA+AGG | + | chr1_2:21738641-21738660 | Msa0062360:intron | 20.0% |
| !! | CCTTATTATATCAGTAATAA+GGG | + | chr1_2:21738642-21738661 | Msa0062360:intron | 20.0% |
| !! | CTTATTATATCAGTAATAAG+GGG | + | chr1_2:21738643-21738662 | Msa0062360:intron | 20.0% |
| !! | TGTGTTATATTGAAAATTGA+GGG | - | chr1_2:21739070-21739089 | None:intergenic | 20.0% |
| !! | ATGTGTTATATTGAAAATTG+AGG | - | chr1_2:21739071-21739090 | None:intergenic | 20.0% |
| !!! | AATAAAAAGTTGTTGTTTAC+GGG | - | chr1_2:21739236-21739255 | None:intergenic | 20.0% |
| !! | TTCATTGAAATAGATAATCA+TGG | + | chr1_2:21739330-21739349 | Msa0062360:intron | 20.0% |
| !!! | TTTTTTTGACACATTACTTT+TGG | + | chr1_2:21739582-21739601 | Msa0062360:intron | 20.0% |
| !!! | TTTTTTGACACATTACTTTT+GGG | + | chr1_2:21739583-21739602 | Msa0062360:intron | 20.0% |
| !!! | TGGGGATAATTTTTTTTTTT+TGG | + | chr1_2:21739602-21739621 | Msa0062360:intron | 20.0% |
| !! | AAAAGAAAAAATCCCAAAAT+GGG | - | chr1_2:21739736-21739755 | None:intergenic | 20.0% |
| !! | AAAAAGAAAAAATCCCAAAA+TGG | - | chr1_2:21739737-21739756 | None:intergenic | 20.0% |
| !!! | GGGATAAAAATTCATTTTTT+TGG | + | chr1_2:21739775-21739794 | Msa0062360:intron | 20.0% |
| !!! | TTTTGGTATAATTGTTTACT+TGG | + | chr1_2:21739792-21739811 | Msa0062360:intron | 20.0% |
| !!! | AATTCATTTTTTCGGTATAA+TGG | + | chr1_2:21739941-21739960 | Msa0062360:intron | 20.0% |
| !!! | ATCACATGAATTTTCATTTT+AGG | + | chr1_2:21740150-21740169 | Msa0062360:intron | 20.0% |
| !!! | TCACATGAATTTTCATTTTA+GGG | + | chr1_2:21740151-21740170 | Msa0062360:intron | 20.0% |
| !! | GTCATTAGTAAATAAATTAG+GGG | + | chr1_2:21740213-21740232 | Msa0062360:intron | 20.0% |
| !! | AAGAATTATATTCAAGAGTA+AGG | - | chr1_2:21740278-21740297 | None:intergenic | 20.0% |
| !!! | TTAAATGTTTTTGATCGTTA+AGG | - | chr1_2:21740361-21740380 | None:intergenic | 20.0% |
| !! | TTAACGATCAAAAACATTTA+AGG | + | chr1_2:21740360-21740379 | Msa0062360:intron | 20.0% |
| !!! | AATTTTTTAAGCACAATGAT+CGG | + | chr1_2:21740460-21740479 | Msa0062360:intron | 20.0% |
| !! | TTACTTACTAGCTATTAATA+AGG | - | chr1_2:21740502-21740521 | None:intergenic | 20.0% |
| !!! | TTTTCTTAATAACTAGTACT+AGG | - | chr1_2:21740535-21740554 | None:intergenic | 20.0% |
| !!! | AAAAGTGTGTTTAATAGTTA+AGG | + | chr1_2:21740670-21740689 | Msa0062360:intron | 20.0% |
| !! | AAAAATTCTATTCAAGAGTA+AGG | + | chr1_2:21740752-21740771 | Msa0062360:intron | 20.0% |
| !!! | TTCTTTTTAGTGATTCTTTT+TGG | - | chr1_2:21740832-21740851 | None:intergenic | 20.0% |
| !!! | GTTAATGATGAATTTTTTGA+GGG | + | chr1_2:21740988-21741007 | Msa0062360:intron | 20.0% |
| !!! | TTAATGATGAATTTTTTGAG+GGG | + | chr1_2:21740989-21741008 | Msa0062360:intron | 20.0% |
| !!! | TTTTTTACATCTTCCTTTTT+GGG | - | chr1_2:21741081-21741100 | None:intergenic | 20.0% |
| !!! | TTTTTTTACATCTTCCTTTT+TGG | - | chr1_2:21741082-21741101 | None:intergenic | 20.0% |
| !!! | AAATATCATCCTTTTGTTTT+TGG | - | chr1_2:21741142-21741161 | None:intergenic | 20.0% |
| !!! | TTTCTTACACATTCTATTTT+GGG | - | chr1_2:21741256-21741275 | None:intergenic | 20.0% |
| !!! | TTTTCTTACACATTCTATTT+TGG | - | chr1_2:21741257-21741276 | None:intergenic | 20.0% |
| !! | AAAAAGAAAATATCCCAAAA+AGG | + | chr1_2:21741274-21741293 | Msa0062360:intron | 20.0% |
| !! | AAAAGATTGTTATCCTAAAA+AGG | + | chr1_2:21741324-21741343 | Msa0062360:intron | 20.0% |
| !! | TGTCAAAAAAAATCACAAAA+AGG | + | chr1_2:21741351-21741370 | Msa0062360:intron | 20.0% |
| !! | AAAAAATCACAAAAAGGATA+CGG | + | chr1_2:21741357-21741376 | Msa0062360:intron | 20.0% |
| !!! | TTTTTTAGACATTCCTTTTT+CGG | - | chr1_2:21741418-21741437 | None:intergenic | 20.0% |
| !! | GTCTAAAAAAAAACTGAAAA+AGG | + | chr1_2:21741428-21741447 | Msa0062360:intron | 20.0% |
| !! | AAAAAAACTGAAAAAGGATA+TGG | + | chr1_2:21741434-21741453 | Msa0062360:intron | 20.0% |
| !!! | TTTTATATAAATAACTGTGC+AGG | + | chr1_2:21742236-21742255 | Msa0062360:intron | 20.0% |
| !!! | AACTTCTTCATTGTTTTTGT+TGG | - | chr1_2:21733259-21733278 | None:intergenic | 25.0% |
| !! | TCTCTCTTCTTTTTCTATAT+AGG | + | chr1_2:21733507-21733526 | Msa0062360:CDS | 25.0% |
| !!! | CTCGATATTTATTTTGTCAT+CGG | + | chr1_2:21733961-21733980 | Msa0062360:intron | 25.0% |
| ! | TATTCAAAACCTTTATGTGT+TGG | + | chr1_2:21734119-21734138 | Msa0062360:intron | 25.0% |
| ! | CATAAATAATCCAAACACAA+TGG | - | chr1_2:21734180-21734199 | None:intergenic | 25.0% |
| !! | TGGATGTAGAATTTTGTAAT+TGG | - | chr1_2:21734214-21734233 | None:intergenic | 25.0% |
| !! | CATCTTTTCGTGTAATTTTA+TGG | + | chr1_2:21734593-21734612 | Msa0062360:intron | 25.0% |
| ! | ACATGCAATTATTATCATTG+AGG | - | chr1_2:21734954-21734973 | None:intergenic | 25.0% |
| !!! | AGCATTTTTCTTCTTTGTTT+TGG | + | chr1_2:21735006-21735025 | Msa0062360:intron | 25.0% |
| !!! | GCATTTTTCTTCTTTGTTTT+GGG | + | chr1_2:21735007-21735026 | Msa0062360:intron | 25.0% |
| ! | TTATACGTAAATATTGGAGT+TGG | + | chr1_2:21735087-21735106 | Msa0062360:intron | 25.0% |
| ! | TGAATAATACACATGTTTAC+TGG | + | chr1_2:21735290-21735309 | Msa0062360:intron | 25.0% |
| !!! | TCTTTCCTATTTATTTCTGA+AGG | - | chr1_2:21735439-21735458 | None:intergenic | 25.0% |
| ! | TTTAGATGAACTATGCTAAA+TGG | - | chr1_2:21735767-21735786 | None:intergenic | 25.0% |
| ! | TTGCATTTAAATCATAGCAA+TGG | + | chr1_2:21735942-21735961 | Msa0062360:intron | 25.0% |
| !! | CAAAGAATGTTTGTAGTTTT+TGG | - | chr1_2:21736081-21736100 | None:intergenic | 25.0% |
| ! | AAAACTACAAACATTCTTTG+AGG | + | chr1_2:21736081-21736100 | Msa0062360:intron | 25.0% |
| !!! | TTCTAACTTTGGTTAGTTTT+TGG | + | chr1_2:21736239-21736258 | Msa0062360:intron | 25.0% |
| !!! | GTTTTTGGAAGTTATATTTC+AGG | + | chr1_2:21736254-21736273 | Msa0062360:intron | 25.0% |
| ! | GAACACACAAAATAGTAAAA+TGG | - | chr1_2:21736456-21736475 | None:intergenic | 25.0% |
| !!! | TTAATTTGTTGATCCAATAG+GGG | - | chr1_2:21736510-21736529 | None:intergenic | 25.0% |
| !!! | CTTAATTTGTTGATCCAATA+GGG | - | chr1_2:21736511-21736530 | None:intergenic | 25.0% |
| !!! | TTTTGGAAATTCTTGAACAA+AGG | - | chr1_2:21736550-21736569 | None:intergenic | 25.0% |
| ! | TTCCAAAAAGAGAATAAGAA+AGG | + | chr1_2:21736562-21736581 | Msa0062360:intron | 25.0% |
| ! | TCCAAAAAGAGAATAAGAAA+GGG | + | chr1_2:21736563-21736582 | Msa0062360:intron | 25.0% |
| !! | GTTATCTTCATAGTCTTAAA+AGG | + | chr1_2:21736624-21736643 | Msa0062360:intron | 25.0% |
| ! | AAGGAAATAAGAGCTTAAAA+TGG | + | chr1_2:21736643-21736662 | Msa0062360:intron | 25.0% |
| ! | TCAAGAAAACTCATATTTAC+TGG | + | chr1_2:21737198-21737217 | Msa0062360:intron | 25.0% |
| !! | AAATTTTGCAAGGTATAAAC+TGG | + | chr1_2:21737309-21737328 | Msa0062360:intron | 25.0% |
| !! | AAATTTGGAATCTATGTATG+GGG | - | chr1_2:21737376-21737395 | None:intergenic | 25.0% |
| !! | CAAAATTTGGAATCTATGTA+TGG | - | chr1_2:21737378-21737397 | None:intergenic | 25.0% |
| ! | AGCAAAAAAGAAACACAAAA+AGG | + | chr1_2:21737992-21738011 | Msa0062360:intron | 25.0% |
| ! | GCAAAAAAGAAACACAAAAA+GGG | + | chr1_2:21737993-21738012 | Msa0062360:intron | 25.0% |
| ! | CAAAAAAGAAACACAAAAAG+GGG | + | chr1_2:21737994-21738013 | Msa0062360:intron | 25.0% |
| !!! | TTGTTTTTTTTCGTTTTCCT+GGG | - | chr1_2:21738033-21738052 | None:intergenic | 25.0% |
| !!! | ATTGTTTTTTTTCGTTTTCC+TGG | - | chr1_2:21738034-21738053 | None:intergenic | 25.0% |
| ! | CCCTTATTACTGATATAATA+AGG | - | chr1_2:21738645-21738664 | None:intergenic | 25.0% |
| ! | TGATGTAGACTATAACTAAA+AGG | - | chr1_2:21738717-21738736 | None:intergenic | 25.0% |
| ! | CTTTATAAAGTTCTTACCAT+TGG | - | chr1_2:21738807-21738826 | None:intergenic | 25.0% |
| ! | CAAAAAAGGATAGTGTTAAA+GGG | - | chr1_2:21739550-21739569 | None:intergenic | 25.0% |
| !!! | CTTTAACACTATCCTTTTTT+GGG | + | chr1_2:21739549-21739568 | Msa0062360:intron | 25.0% |
| !!! | AAAAGAAAGTATCCCAAAAA+AGG | - | chr1_2:21739564-21739583 | None:intergenic | 25.0% |
| !!! | TTTTTGACACATTACTTTTG+GGG | + | chr1_2:21739584-21739603 | Msa0062360:intron | 25.0% |
| !! | TTTTCTGACACATTTCATTT+TGG | + | chr1_2:21739753-21739772 | Msa0062360:intron | 25.0% |
| !! | TTTCTGACACATTTCATTTT+GGG | + | chr1_2:21739754-21739773 | Msa0062360:intron | 25.0% |
| !! | TATTTTACCAATACCCATTT+TGG | + | chr1_2:21739877-21739896 | Msa0062360:intron | 25.0% |
| !! | ATTTTACCAATACCCATTTT+GGG | + | chr1_2:21739878-21739897 | Msa0062360:intron | 25.0% |
| ! | AAAAAGAAATAGCCCAAAAT+GGG | - | chr1_2:21739893-21739912 | None:intergenic | 25.0% |
| ! | AAAAAAGAAATAGCCCAAAA+TGG | - | chr1_2:21739894-21739913 | None:intergenic | 25.0% |
| !!! | GGGATAGAAATTCATTTTTT+CGG | + | chr1_2:21739933-21739952 | Msa0062360:intron | 25.0% |
| ! | TATGAAGTTGTTGATCATTA+TGG | + | chr1_2:21740118-21740137 | Msa0062360:intron | 25.0% |
| !!! | TTTCATTTTAGGGATTCATT+TGG | + | chr1_2:21740161-21740180 | Msa0062360:intron | 25.0% |
| !!! | TTCATTTTAGGGATTCATTT+GGG | + | chr1_2:21740162-21740181 | Msa0062360:intron | 25.0% |
| ! | ATAGCTAGTAAGTAAAATCT+TGG | + | chr1_2:21740507-21740526 | Msa0062360:intron | 25.0% |
| ! | TAAGAAAAATGATGTTGCAA+CGG | + | chr1_2:21740547-21740566 | Msa0062360:intron | 25.0% |
| ! | AAACTCATAAAAGATGTTGT+TGG | + | chr1_2:21740901-21740920 | Msa0062360:intron | 25.0% |
| !!! | CGTTAATGATGAATTTTTTG+AGG | + | chr1_2:21740987-21741006 | Msa0062360:intron | 25.0% |
| !! | ATGAATTTTTATCCCCAAAA+AGG | + | chr1_2:21741065-21741084 | Msa0062360:intron | 25.0% |
| !! | TTTTTACATCTTCCTTTTTG+GGG | - | chr1_2:21741080-21741099 | None:intergenic | 25.0% |
| ! | AAATATATCCCAAAAAGGAT+AGG | + | chr1_2:21741102-21741121 | Msa0062360:intron | 25.0% |
| ! | AATATATCCCAAAAAGGATA+GGG | + | chr1_2:21741103-21741122 | Msa0062360:intron | 25.0% |
| ! | ACAATTATGCCAAAAACAAA+AGG | + | chr1_2:21741130-21741149 | Msa0062360:intron | 25.0% |
| !! | ATGATATTTTATCCCACAAA+AGG | + | chr1_2:21741153-21741172 | Msa0062360:intron | 25.0% |
| ! | AAAAGGAATGTGTCAAAAAA+AGG | + | chr1_2:21741170-21741189 | Msa0062360:intron | 25.0% |
| ! | AAAAGGTAAATATCCCAAAA+AGG | + | chr1_2:21741187-21741206 | Msa0062360:intron | 25.0% |
| !! | GTTTTACTTGTATCCTTTTT+GGG | - | chr1_2:21741203-21741222 | None:intergenic | 25.0% |
| !! | TGTTTTACTTGTATCCTTTT+TGG | - | chr1_2:21741204-21741223 | None:intergenic | 25.0% |
| !! | TTCTTACACATTCTATTTTG+GGG | - | chr1_2:21741255-21741274 | None:intergenic | 25.0% |
| ! | AAAATATCCCAAAAAGGATA+TGG | + | chr1_2:21741280-21741299 | Msa0062360:intron | 25.0% |
| ! | AAATATCCCAAAAAGGATAT+GGG | + | chr1_2:21741281-21741300 | Msa0062360:intron | 25.0% |
| !! | AGGATAACAATCTTTTTGTT+TGG | - | chr1_2:21741320-21741339 | None:intergenic | 25.0% |
| !! | TTTTTGACACTTTCCTTTTT+AGG | - | chr1_2:21741340-21741359 | None:intergenic | 25.0% |
| ! | AAAAATCACAAAAAGGATAC+GGG | + | chr1_2:21741358-21741377 | Msa0062360:intron | 25.0% |
| ! | TTACATAAAATTGCATCGTA+TGG | + | chr1_2:21741469-21741488 | Msa0062360:intron | 25.0% |
| !!! | AACATCTTCATTGTTTTTGT+TGG | - | chr1_2:21741811-21741830 | None:intergenic | 25.0% |
| !! | TCTCTCTTCTTTTTCTATAA+AGG | + | chr1_2:21742059-21742078 | Msa0062360:intron | 25.0% |
| ! | TTGATTGAATAATGAGCATA+GGG | - | chr1_2:21742181-21742200 | None:intergenic | 25.0% |
| ! | ATTGATTGAATAATGAGCAT+AGG | - | chr1_2:21742182-21742201 | None:intergenic | 25.0% |
| GAAGAAGTTCAAAATTTCCA+TGG | + | chr1_2:21733270-21733289 | Msa0062360:CDS | 30.0% | |
| TGTGACCATGATTTAAAAGT+TGG | - | chr1_2:21734088-21734107 | None:intergenic | 30.0% | |
| TTAAATCATGGTCACACTAT+AGG | + | chr1_2:21734092-21734111 | Msa0062360:intron | 30.0% | |
| CAAAAACTACCAACACATAA+AGG | - | chr1_2:21734131-21734150 | None:intergenic | 30.0% | |
| !!! | TTATGTGTTGGTAGTTTTTG+TGG | + | chr1_2:21734131-21734150 | Msa0062360:intron | 30.0% |
| TGTAAAATTCAGTTGCAAAG+AGG | - | chr1_2:21734306-21734325 | None:intergenic | 30.0% | |
| ! | AATAAAAAGGACGTGTTTTG+AGG | - | chr1_2:21734506-21734525 | None:intergenic | 30.0% |
| ! | CTTTTCGTGTAATTTTATGG+TGG | + | chr1_2:21734596-21734615 | Msa0062360:intron | 30.0% |
| GCAATTTAAGCTTGCAATTA+TGG | + | chr1_2:21734736-21734755 | Msa0062360:intron | 30.0% | |
| !! | ATGGAACTTATTTTCTGATG+TGG | + | chr1_2:21734900-21734919 | Msa0062360:intron | 30.0% |
| GTGCAAAATTGTCTTTCATA+AGG | - | chr1_2:21735054-21735073 | None:intergenic | 30.0% | |
| CAATAATGGTGAAAAGTCTT+CGG | - | chr1_2:21735578-21735597 | None:intergenic | 30.0% | |
| ! | AAGACTTTTCACCATTATTG+TGG | + | chr1_2:21735578-21735597 | Msa0062360:intron | 30.0% |
| AAACTATAGAACGCTGTAAA+TGG | - | chr1_2:21735830-21735849 | None:intergenic | 30.0% | |
| !! | TACAAACATTCTTTGAGGTT+GGG | + | chr1_2:21736086-21736105 | Msa0062360:intron | 30.0% |
| ! | TCATTTTCGACTTCTAACTT+TGG | + | chr1_2:21736228-21736247 | Msa0062360:intron | 30.0% |
| GAAGAAATAATTCCTTTGTG+TGG | + | chr1_2:21736313-21736332 | Msa0062360:intron | 30.0% | |
| GAATTTGAGCATGATTACAT+AGG | + | chr1_2:21736335-21736354 | Msa0062360:intron | 30.0% | |
| ATTATATTGAACTCCCCTAT+TGG | + | chr1_2:21736494-21736513 | Msa0062360:intron | 30.0% | |
| !! | CCTTAATTTGTTGATCCAAT+AGG | - | chr1_2:21736512-21736531 | None:intergenic | 30.0% |
| CCTATTGGATCAACAAATTA+AGG | + | chr1_2:21736509-21736528 | Msa0062360:intron | 30.0% | |
| ! | TCCCTTTCTTATTCTCTTTT+TGG | - | chr1_2:21736567-21736586 | None:intergenic | 30.0% |
| AAGAAAGGGATCATATTTCT+TGG | + | chr1_2:21736577-21736596 | Msa0062360:intron | 30.0% | |
| AAGTAAAGATGAACTTGAAG+TGG | - | chr1_2:21736981-21737000 | None:intergenic | 30.0% | |
| ! | CCTTTAAAAAGGTGGAAAAT+TGG | - | chr1_2:21737011-21737030 | None:intergenic | 30.0% |
| ! | CCAATTTTCCACCTTTTTAA+AGG | + | chr1_2:21737008-21737027 | Msa0062360:intron | 30.0% |
| !! | ATTTTCCACCTTTTTAAAGG+AGG | + | chr1_2:21737011-21737030 | Msa0062360:intron | 30.0% |
| ! | GTTTAACTCGCTTTAGATTT+GGG | - | chr1_2:21737108-21737127 | None:intergenic | 30.0% |
| ! | TGTTTAACTCGCTTTAGATT+TGG | - | chr1_2:21737109-21737128 | None:intergenic | 30.0% |
| TATATATACTAGCGTTCAGA+CGG | + | chr1_2:21737424-21737443 | Msa0062360:intron | 30.0% | |
| CAATAAAAAGAGCAAACAGA+CGG | - | chr1_2:21737461-21737480 | None:intergenic | 30.0% | |
| CAATAAAACAAGTGAACACA+TGG | + | chr1_2:21737664-21737683 | Msa0062360:intron | 30.0% | |
| !! | TATTTATAGAGTGTTGCAGT+TGG | - | chr1_2:21737851-21737870 | None:intergenic | 30.0% |
| !! | TTCTTTTTCCTTGTTTCAGA+AGG | - | chr1_2:21737925-21737944 | None:intergenic | 30.0% |
| GGAAAAAGAAAAACAATGCA+AGG | + | chr1_2:21737935-21737954 | Msa0062360:intron | 30.0% | |
| !!! | TTTTTTGCTTGAGAAGGTTT+TGG | - | chr1_2:21737981-21738000 | None:intergenic | 30.0% |
| !!! | TGTTTCTTTTTTGCTTGAGA+AGG | - | chr1_2:21737987-21738006 | None:intergenic | 30.0% |
| !! | ACTGATTTGGCTAATTTACA+AGG | - | chr1_2:21738502-21738521 | None:intergenic | 30.0% |
| TTGTAAATTAGCCAAATCAG+TGG | + | chr1_2:21738501-21738520 | Msa0062360:intron | 30.0% | |
| TGATATAATAAGGTCTAGAG+AGG | - | chr1_2:21738635-21738654 | None:intergenic | 30.0% | |
| GACTATAACTAAAAGGAATG+TGG | - | chr1_2:21738710-21738729 | None:intergenic | 30.0% | |
| ATAAAGTTCTTACCATTGGT+CGG | - | chr1_2:21738803-21738822 | None:intergenic | 30.0% | |
| ! | ATAACTCATTTCAGCTCTTT+TGG | + | chr1_2:21739018-21739037 | Msa0062360:intron | 30.0% |
| ! | TAACTCATTTCAGCTCTTTT+GGG | + | chr1_2:21739019-21739038 | Msa0062360:intron | 30.0% |
| !!! | TTGAAAATTGAGGGCATTTT+TGG | - | chr1_2:21739061-21739080 | None:intergenic | 30.0% |
| ! | TGTTGTTTACGGGTAAAATT+GGG | - | chr1_2:21739226-21739245 | None:intergenic | 30.0% |
| !! | TTGTTGTTTACGGGTAAAAT+TGG | - | chr1_2:21739227-21739246 | None:intergenic | 30.0% |
| TATATGTACTAGCGAAAAGA+CGG | - | chr1_2:21739518-21739537 | None:intergenic | 30.0% | |
| CCAAAAAAGGATAGTGTTAA+AGG | - | chr1_2:21739551-21739570 | None:intergenic | 30.0% | |
| !!! | CCTTTAACACTATCCTTTTT+TGG | + | chr1_2:21739548-21739567 | Msa0062360:intron | 30.0% |
| AAATATCCCAAAATGGATAC+TGG | - | chr1_2:21739647-21739666 | None:intergenic | 30.0% | |
| ! | TGTTTTACTAGTACCCATTT+TGG | + | chr1_2:21739720-21739739 | Msa0062360:intron | 30.0% |
| ! | GTTTTACTAGTACCCATTTT+GGG | + | chr1_2:21739721-21739740 | Msa0062360:intron | 30.0% |
| ! | TTCTGACACATTTCATTTTG+GGG | + | chr1_2:21739755-21739774 | Msa0062360:intron | 30.0% |
| ! | TGTTTACTTGGACCATTTTA+CGG | + | chr1_2:21739804-21739823 | Msa0062360:intron | 30.0% |
| !!! | TTTTTTGACACATCCCTTTT+TGG | + | chr1_2:21739911-21739930 | Msa0062360:intron | 30.0% |
| ! | TTTTTGACACATCCCTTTTT+GGG | + | chr1_2:21739912-21739931 | Msa0062360:intron | 30.0% |
| TGAATTTCTATCCCCAAAAA+GGG | - | chr1_2:21739927-21739946 | None:intergenic | 30.0% | |
| ATGAATTTCTATCCCCAAAA+AGG | - | chr1_2:21739928-21739947 | None:intergenic | 30.0% | |
| TATTGAACTCCAAAAAGATG+TGG | - | chr1_2:21740097-21740116 | None:intergenic | 30.0% | |
| TCGTTAAGGATAAAGTTTCA+CGG | - | chr1_2:21740347-21740366 | None:intergenic | 30.0% | |
| ! | TGTTTTACCCTATCCTTTTT+GGG | - | chr1_2:21741113-21741132 | None:intergenic | 30.0% |
| !! | TTGTTTTACCCTATCCTTTT+TGG | - | chr1_2:21741114-21741133 | None:intergenic | 30.0% |
| ! | TTTTGACACATTCCTTTTGT+GGG | - | chr1_2:21741168-21741187 | None:intergenic | 30.0% |
| ! | TTTTTGACACATTCCTTTTG+TGG | - | chr1_2:21741169-21741188 | None:intergenic | 30.0% |
| ! | GTTTAACCCATATCCTTTTT+GGG | - | chr1_2:21741290-21741309 | None:intergenic | 30.0% |
| ! | TGTTTAACCCATATCCTTTT+TGG | - | chr1_2:21741291-21741310 | None:intergenic | 30.0% |
| TGAAAAAGGATATGGTCAAA+GGG | + | chr1_2:21741442-21741461 | Msa0062360:intron | 30.0% | |
| GTGATGGTTTCTTACTAAAT+GGG | + | chr1_2:21741495-21741514 | Msa0062360:intron | 30.0% | |
| GATTAAAAAAACCAGCGAAA+TGG | + | chr1_2:21741517-21741536 | Msa0062360:intron | 30.0% | |
| GCAATTCAAATGGATCATAT+TGG | - | chr1_2:21741878-21741897 | None:intergenic | 30.0% | |
| ACCTTCATCTACATTAGATA+AGG | - | chr1_2:21742328-21742347 | None:intergenic | 30.0% | |
| TAACAAGGAGTTCATCAGAA+GGG | - | chr1_2:21733224-21733243 | None:intergenic | 35.0% | |
| !!! | CTTCATTGTTTTTGTTGGCA+AGG | - | chr1_2:21733254-21733273 | None:intergenic | 35.0% |
| GCAATTCAAACGGATCATAT+TGG | - | chr1_2:21733326-21733345 | None:intergenic | 35.0% | |
| !!! | TAGTTTTGATTGCGTTCTGA+GGG | - | chr1_2:21733539-21733558 | None:intergenic | 35.0% |
| AGAACGCAATCAAAACTAGT+TGG | + | chr1_2:21733541-21733560 | Msa0062360:CDS | 35.0% | |
| ATGGATCTGGACTTTGAATT+TGG | + | chr1_2:21733748-21733767 | Msa0062360:CDS | 35.0% | |
| TGGATCTGGACTTTGAATTT+GGG | + | chr1_2:21733749-21733768 | Msa0062360:CDS | 35.0% | |
| TGAAGGAACTCAACAACTTA+AGG | + | chr1_2:21733831-21733850 | Msa0062360:CDS | 35.0% | |
| GAAGGAACTCAACAACTTAA+GGG | + | chr1_2:21733832-21733851 | Msa0062360:CDS | 35.0% | |
| AAGGAACTCAACAACTTAAG+GGG | + | chr1_2:21733833-21733852 | Msa0062360:CDS | 35.0% | |
| CAAAATACCTCCATCATATG+CGG | + | chr1_2:21734029-21734048 | Msa0062360:intron | 35.0% | |
| AAAATACCTCCATCATATGC+GGG | + | chr1_2:21734030-21734049 | Msa0062360:intron | 35.0% | |
| AGAGGATCAACAACATTAAC+TGG | - | chr1_2:21734288-21734307 | None:intergenic | 35.0% | |
| ATTGCAAGCTTAAATTGCTC+CGG | - | chr1_2:21734734-21734753 | None:intergenic | 35.0% | |
| AGACTGACCATATGATGTTT+AGG | + | chr1_2:21735182-21735201 | Msa0062360:intron | 35.0% | |
| GACTGACCATATGATGTTTA+GGG | + | chr1_2:21735183-21735202 | Msa0062360:intron | 35.0% | |
| TGCATACCCTAAACATCATA+TGG | - | chr1_2:21735192-21735211 | None:intergenic | 35.0% | |
| GAAAGACTATATCTCTCCAT+TGG | + | chr1_2:21735453-21735472 | Msa0062360:intron | 35.0% | |
| GATGCCTTTCTCTATACTAT+TGG | + | chr1_2:21735550-21735569 | Msa0062360:intron | 35.0% | |
| GGTTCCAATAGTATAGAGAA+AGG | - | chr1_2:21735557-21735576 | None:intergenic | 35.0% | |
| CATGCAAGATATCCTACAAA+TGG | - | chr1_2:21735631-21735650 | None:intergenic | 35.0% | |
| TTGTAGGATATCTTGCATGA+AGG | + | chr1_2:21735632-21735651 | Msa0062360:intron | 35.0% | |
| GTGTCGTATTCTTGACATTA+TGG | - | chr1_2:21735799-21735818 | None:intergenic | 35.0% | |
| TAATGTCAAGAATACGACAC+AGG | + | chr1_2:21735799-21735818 | Msa0062360:intron | 35.0% | |
| GAGTTCAAGAGCAATAGAAA+AGG | - | chr1_2:21735977-21735996 | None:intergenic | 35.0% | |
| !! | CTACAAACATTCTTTGAGGT+TGG | + | chr1_2:21736085-21736104 | Msa0062360:intron | 35.0% |
| ACATAGGTCATATAAGCTCA+AGG | + | chr1_2:21736351-21736370 | Msa0062360:intron | 35.0% | |
| CAAATTAAGGACACTTCACA+TGG | + | chr1_2:21736522-21736541 | Msa0062360:intron | 35.0% | |
| ! | AATGTGCACTTACGTTGTTT+TGG | - | chr1_2:21736690-21736709 | None:intergenic | 35.0% |
| TGCAAGGTATAAACTGGATA+TGG | + | chr1_2:21737315-21737334 | Msa0062360:intron | 35.0% | |
| TGTAACTACCAGCATTTAGA+CGG | - | chr1_2:21737701-21737720 | None:intergenic | 35.0% | |
| TCTAAATGCTGGTAGTTACA+AGG | + | chr1_2:21737701-21737720 | Msa0062360:intron | 35.0% | |
| !! | AACCAAAACCTTCTGAAACA+AGG | + | chr1_2:21737914-21737933 | Msa0062360:intron | 35.0% |
| !! | TTCCTTGTTTCAGAAGGTTT+TGG | - | chr1_2:21737919-21737938 | None:intergenic | 35.0% |
| AAACAATGCAAGGTAAGAGA+AGG | + | chr1_2:21737945-21737964 | Msa0062360:intron | 35.0% | |
| AACAATGCAAGGTAAGAGAA+GGG | + | chr1_2:21737946-21737965 | Msa0062360:intron | 35.0% | |
| CGAAAAAACTCGAATCAATC+TGG | + | chr1_2:21738097-21738116 | Msa0062360:intron | 35.0% | |
| TGAAATCCATAGAAGCAGAA+CGG | + | chr1_2:21738200-21738219 | Msa0062360:intron | 35.0% | |
| TTACAGCAGCACTTTCAAAA+GGG | - | chr1_2:21738304-21738323 | None:intergenic | 35.0% | |
| TTTACAGCAGCACTTTCAAA+AGG | - | chr1_2:21738305-21738324 | None:intergenic | 35.0% | |
| !!! | TAGAATGACTGGTTTTGATG+AGG | - | chr1_2:21738362-21738381 | None:intergenic | 35.0% |
| ! | AAACCAGTCATTCTAGAAGA+AGG | + | chr1_2:21738367-21738386 | Msa0062360:intron | 35.0% |
| ATATGCTAATAGTTGGCCAA+TGG | - | chr1_2:21738450-21738469 | None:intergenic | 35.0% | |
| TACCCTGATATGCTAATAGT+TGG | - | chr1_2:21738457-21738476 | None:intergenic | 35.0% | |
| !! | TAGGAAGTATCTCTTTCTCA+AGG | + | chr1_2:21738575-21738594 | Msa0062360:intron | 35.0% |
| TAAAGTTCTTACCATTGGTC+GGG | - | chr1_2:21738802-21738821 | None:intergenic | 35.0% | |
| ! | CAATAAAAAGTGCGGAAAGA+CGG | + | chr1_2:21739480-21739499 | Msa0062360:intron | 35.0% |
| ! | ACCTTTACCAGTATCCATTT+TGG | + | chr1_2:21739637-21739656 | Msa0062360:intron | 35.0% |
| ! | CCTTTACCAGTATCCATTTT+GGG | + | chr1_2:21739638-21739657 | Msa0062360:intron | 35.0% |
| AAATAGCCCAAAATGGGTAT+TGG | - | chr1_2:21739887-21739906 | None:intergenic | 35.0% | |
| ! | TTTTGACACATCCCTTTTTG+GGG | + | chr1_2:21739913-21739932 | Msa0062360:intron | 35.0% |
| ! | TTAGTCCAACCACATCTTTT+TGG | + | chr1_2:21740085-21740104 | Msa0062360:intron | 35.0% |
| GTTGTTGATCATTATGGAGT+TGG | + | chr1_2:21740124-21740143 | Msa0062360:intron | 35.0% | |
| CTGAAAAAGGATATGGTCAA+AGG | + | chr1_2:21741441-21741460 | Msa0062360:intron | 35.0% | |
| GAAAAAGGATATGGTCAAAG+GGG | + | chr1_2:21741443-21741462 | Msa0062360:intron | 35.0% | |
| CGTGATGGTTTCTTACTAAA+TGG | + | chr1_2:21741494-21741513 | Msa0062360:intron | 35.0% | |
| ! | TGACAAATTTTCCATTTCGC+TGG | - | chr1_2:21741531-21741550 | None:intergenic | 35.0% |
| TCACATAAGCTTCATAAGAG+GGG | - | chr1_2:21741579-21741598 | None:intergenic | 35.0% | |
| GTCACATAAGCTTCATAAGA+GGG | - | chr1_2:21741580-21741599 | None:intergenic | 35.0% | |
| TGTCACATAAGCTTCATAAG+AGG | - | chr1_2:21741581-21741600 | None:intergenic | 35.0% | |
| TTTAGAGAGGATAGTGCAAA+TGG | - | chr1_2:21741673-21741692 | None:intergenic | 35.0% | |
| TGGAAAGGTTATGGGTTTAA+GGG | - | chr1_2:21741697-21741716 | None:intergenic | 35.0% | |
| GAGAAAACTGGAAAGGTTAT+GGG | - | chr1_2:21741705-21741724 | None:intergenic | 35.0% | |
| AGAGAAAACTGGAAAGGTTA+TGG | - | chr1_2:21741706-21741725 | None:intergenic | 35.0% | |
| AAGGAAAGAGAAAACTGGAA+AGG | - | chr1_2:21741712-21741731 | None:intergenic | 35.0% | |
| TAACAAGGAGTTCATCAGAA+GGG | - | chr1_2:21733224-21733243 | None:intergenic | 35.0% | |
| !!! | CTTCATTGTTTTTGTTGGCA+AGG | - | chr1_2:21733254-21733273 | None:intergenic | 35.0% |
| GAAGATGTTCAGAATTTCCA+TGG | + | chr1_2:21741822-21741841 | Msa0062360:intron | 35.0% | |
| CAAATGGATCATATTGGTAC+AGG | - | chr1_2:21741872-21741891 | None:intergenic | 35.0% | |
| TGAGCAAGATGCAATTCAAA+TGG | - | chr1_2:21741888-21741907 | None:intergenic | 35.0% | |
| TTCTCAAATGACATACCTGA+GGG | - | chr1_2:21742148-21742167 | None:intergenic | 35.0% | |
| TTTCTCAAATGACATACCTG+AGG | - | chr1_2:21742149-21742168 | None:intergenic | 35.0% | |
| AAAACACGGCAAACAACAAA+AGG | - | chr1_2:21733712-21733731 | None:intergenic | 35.0% | |
| TGGATCTAGACTCTGAATTT+AGG | + | chr1_2:21742301-21742320 | Msa0062360:CDS | 35.0% | |
| GGATCTAGACTCTGAATTTA+GGG | + | chr1_2:21742302-21742321 | Msa0062360:CDS | 35.0% | |
| GCCTTATCTAATGTAGATGA+AGG | + | chr1_2:21742324-21742343 | Msa0062360:CDS | 35.0% | |
| CTAACAAGGAGTTCATCAGA+AGG | - | chr1_2:21733225-21733244 | None:intergenic | 40.0% | |
| ! | ACAGGTTTAGCTCCTTAATC+AGG | - | chr1_2:21733302-21733321 | None:intergenic | 40.0% |
| CAAACGGATCATATTGGTAC+AGG | - | chr1_2:21733320-21733339 | None:intergenic | 40.0% | |
| CCAGCAAGATGCAATTCAAA+CGG | - | chr1_2:21733336-21733355 | None:intergenic | 40.0% | |
| CGTTTGAATTGCATCTTGCT+GGG | + | chr1_2:21733334-21733353 | Msa0062360:CDS | 40.0% | |
| ! | CTTTTTCTTCCCTCACACAA+GGG | + | chr1_2:21733359-21733378 | Msa0062360:intron | 40.0% |
| AGTAAAACTCCCTTGTGTGA+GGG | - | chr1_2:21733371-21733390 | None:intergenic | 40.0% | |
| ! | GGCATTGTAAGACTGGATTT+TGG | + | chr1_2:21733421-21733440 | Msa0062360:CDS | 40.0% |
| ! | ACTGGATTTTGGATGCAGAT+GGG | + | chr1_2:21733432-21733451 | Msa0062360:CDS | 40.0% |
| !!! | AGTTTTGATTGCGTTCTGAG+GGG | - | chr1_2:21733538-21733557 | None:intergenic | 40.0% |
| !!! | CTAGTTTTGATTGCGTTCTG+AGG | - | chr1_2:21733540-21733559 | None:intergenic | 40.0% |
| ! | AACCCTCAGGTATGTCATTT+GGG | + | chr1_2:21733591-21733610 | Msa0062360:intron | 40.0% |
| TTCCCAAATGACATACCTGA+GGG | - | chr1_2:21733596-21733615 | None:intergenic | 40.0% | |
| TTTCCCAAATGACATACCTG+AGG | - | chr1_2:21733597-21733616 | None:intergenic | 40.0% | |
| GGATCTGGACTTTGAATTTG+GGG | + | chr1_2:21733750-21733769 | Msa0062360:CDS | 40.0% | |
| ACCTTCATCGACATCAGATA+AGG | - | chr1_2:21733776-21733795 | None:intergenic | 40.0% | |
| AGGAACTCAACAACTTAAGG+GGG | + | chr1_2:21733834-21733853 | Msa0062360:CDS | 40.0% | |
| !! | ACTAGTTCTAGTGTTGATGC+TGG | + | chr1_2:21733862-21733881 | Msa0062360:CDS | 40.0% |
| AATCATGGTCACACTATAGG+TGG | + | chr1_2:21734095-21734114 | Msa0062360:intron | 40.0% | |
| CCAAACACAATGGAGCTATT+TGG | - | chr1_2:21734170-21734189 | None:intergenic | 40.0% | |
| CCAAATAGCTCCATTGTGTT+TGG | + | chr1_2:21734167-21734186 | Msa0062360:intron | 40.0% | |
| ! | TTTTTGTCTAGTCCTGCTCT+TGG | + | chr1_2:21734814-21734833 | Msa0062360:intron | 40.0% |
| ! | TTTTGTCTAGTCCTGCTCTT+GGG | + | chr1_2:21734815-21734834 | Msa0062360:intron | 40.0% |
| !! | CCATCAACTGAGTTCTAAGA+GGG | - | chr1_2:21734884-21734903 | None:intergenic | 40.0% |
| !! | TCCATCAACTGAGTTCTAAG+AGG | - | chr1_2:21734885-21734904 | None:intergenic | 40.0% |
| ! | GAAAGACAATTTTGCACGAG+AGG | + | chr1_2:21735057-21735076 | Msa0062360:intron | 40.0% |
| ! | TTTGAGATCAGTGAGTCACA+TGG | - | chr1_2:21735501-21735520 | None:intergenic | 40.0% |
| GTCACTAGAGAGAGATAGAT+GGG | - | chr1_2:21735526-21735545 | None:intergenic | 40.0% | |
| !! | AGTATAGAGAAAGGCATCGA+TGG | - | chr1_2:21735548-21735567 | None:intergenic | 40.0% |
| !! | TTCTTTGAGGTTGGGTGTAT+TGG | + | chr1_2:21736094-21736113 | Msa0062360:intron | 40.0% |
| CATGCTCAAATTCCACACAA+AGG | - | chr1_2:21736328-21736347 | None:intergenic | 40.0% | |
| GGGATCATATTTCTTGGTAG+TGG | + | chr1_2:21736583-21736602 | Msa0062360:intron | 40.0% | |
| GTGGTCTTCACATTTCTTCA+TGG | + | chr1_2:21736602-21736621 | Msa0062360:intron | 40.0% | |
| GATGAACTTGAAGTGGATGA+AGG | - | chr1_2:21736974-21736993 | None:intergenic | 40.0% | |
| ! | TAGCGACTCCTCCTTTAAAA+AGG | - | chr1_2:21737022-21737041 | None:intergenic | 40.0% |
| !! | TTTTTAAAGGAGGAGTCGCT+AGG | + | chr1_2:21737021-21737040 | Msa0062360:intron | 40.0% |
| !! | TTTTAAAGGAGGAGTCGCTA+GGG | + | chr1_2:21737022-21737041 | Msa0062360:intron | 40.0% |
| GAAATTGTCCGTCTAAATGC+TGG | + | chr1_2:21737690-21737709 | Msa0062360:intron | 40.0% | |
| ! | TAAGCAAAAAGAGGTGCAGA+TGG | + | chr1_2:21737821-21737840 | Msa0062360:intron | 40.0% |
| ACAATGCAAGGTAAGAGAAG+GGG | + | chr1_2:21737947-21737966 | Msa0062360:intron | 40.0% | |
| ACGAAAAAGAAGAGGCAGAA+GGG | - | chr1_2:21738160-21738179 | None:intergenic | 40.0% | |
| CTAAGACCACGAAAAAGAAG+AGG | - | chr1_2:21738168-21738187 | None:intergenic | 40.0% | |
| TTCTATGGATTTCACTGAGG+TGG | - | chr1_2:21738194-21738213 | None:intergenic | 40.0% | |
| TGCTTCTATGGATTTCACTG+AGG | - | chr1_2:21738197-21738216 | None:intergenic | 40.0% | |
| TTTCAAAAGGGGAATGAGGT+TGG | - | chr1_2:21738292-21738311 | None:intergenic | 40.0% | |
| TACAGCAGCACTTTCAAAAG+GGG | - | chr1_2:21738303-21738322 | None:intergenic | 40.0% | |
| !! | TCACCTTCTTCTAGAATGAC+TGG | - | chr1_2:21738373-21738392 | None:intergenic | 40.0% |
| ACACTCAAGATTCTCCATCT+TGG | - | chr1_2:21738402-21738421 | None:intergenic | 40.0% | |
| TGGCCAACTATTAGCATATC+AGG | + | chr1_2:21738451-21738470 | Msa0062360:intron | 40.0% | |
| GGCCAACTATTAGCATATCA+GGG | + | chr1_2:21738452-21738471 | Msa0062360:intron | 40.0% | |
| ! | GGAAGTTCATACCACTGATT+TGG | - | chr1_2:21738515-21738534 | None:intergenic | 40.0% |
| GTATGAACTTCCACCTCAAT+TGG | + | chr1_2:21738523-21738542 | Msa0062360:intron | 40.0% | |
| ! | GCTGTTTCAACAGAAATGCT+AGG | + | chr1_2:21738556-21738575 | Msa0062360:intron | 40.0% |
| ! | AGGTTTAAAACATCTCCCAC+AGG | + | chr1_2:21738595-21738614 | Msa0062360:intron | 40.0% |
| GTAATTGCAAGTATGCCTGT+GGG | - | chr1_2:21738613-21738632 | None:intergenic | 40.0% | |
| AAAGTTCTTACCATTGGTCG+GGG | - | chr1_2:21738801-21738820 | None:intergenic | 40.0% | |
| CGTTAGCGCAATAAAAAGTG+CGG | + | chr1_2:21739472-21739491 | Msa0062360:intron | 40.0% | |
| CCCAAAATGGATACTGGTAA+AGG | - | chr1_2:21739641-21739660 | None:intergenic | 40.0% | |
| GAACTCCAAAAAGATGTGGT+TGG | - | chr1_2:21740093-21740112 | None:intergenic | 40.0% | |
| ! | ACCGTGCATTTGAGATATGT+GGG | - | chr1_2:21740706-21740725 | None:intergenic | 40.0% |
| ! | AACCGTGCATTTGAGATATG+TGG | - | chr1_2:21740707-21740726 | None:intergenic | 40.0% |
| !!! | TGGGTTTAAGGGTTTTAGAG+AGG | - | chr1_2:21741686-21741705 | None:intergenic | 40.0% |
| CTGGAAAGGTTATGGGTTTA+AGG | - | chr1_2:21741698-21741717 | None:intergenic | 40.0% | |
| GCTGAAAGGAAAGAGAAAAC+TGG | - | chr1_2:21741717-21741736 | None:intergenic | 40.0% | |
| CTAACAAGGAGTTCATCAGA+AGG | - | chr1_2:21733225-21733244 | None:intergenic | 40.0% | |
| TGGCAAGGTAATAGCTAACA+AGG | - | chr1_2:21741791-21741810 | None:intergenic | 40.0% | |
| ACAGGTTCAACTCCTTAATC+AGG | - | chr1_2:21741854-21741873 | None:intergenic | 40.0% | |
| ! | CTTTTTCTTCCGTCACACAA+GGG | + | chr1_2:21741911-21741930 | Msa0062360:intron | 40.0% |
| AGTAAAACTCCCTTGTGTGA+CGG | - | chr1_2:21733371-21733390 | None:intergenic | 40.0% | |
| !!! | TAGTTTTGATCGCGTTCTGA+GGG | - | chr1_2:21742091-21742110 | None:intergenic | 40.0% |
| TCTAATGACAAGGCGAATGA+AGG | + | chr1_2:21742366-21742385 | Msa0062360:CDS | 40.0% | |
| GAAGGAACTCAGCAACTTAA+AGG | + | chr1_2:21742384-21742403 | Msa0062360:CDS | 40.0% | |
| TGGCAAGGTAGTAGCTAACA+AGG | - | chr1_2:21733239-21733258 | None:intergenic | 45.0% | |
| CCTTAATCAGGTCAGAACCA+TGG | - | chr1_2:21733290-21733309 | None:intergenic | 45.0% | |
| !! | CCATGGTTCTGACCTGATTA+AGG | + | chr1_2:21733287-21733306 | Msa0062360:CDS | 45.0% |
| CCGTTTGAATTGCATCTTGC+TGG | + | chr1_2:21733333-21733352 | Msa0062360:CDS | 45.0% | |
| CCTTGTGTGAGGGAAGAAAA+AGG | - | chr1_2:21733361-21733380 | None:intergenic | 45.0% | |
| ! | CCTTTTTCTTCCCTCACACA+AGG | + | chr1_2:21733358-21733377 | Msa0062360:intron | 45.0% |
| CAGTAAAACTCCCTTGTGTG+AGG | - | chr1_2:21733372-21733391 | None:intergenic | 45.0% | |
| ! | GACTGGATTTTGGATGCAGA+TGG | + | chr1_2:21733431-21733450 | Msa0062360:CDS | 45.0% |
| GATGTCGGAGACATTACTGT+TGG | + | chr1_2:21733456-21733475 | Msa0062360:CDS | 45.0% | |
| CACTCTTGTTAACAACCCTC+AGG | + | chr1_2:21733578-21733597 | Msa0062360:CDS | 45.0% | |
| CAACCCTCAGGTATGTCATT+TGG | + | chr1_2:21733590-21733609 | Msa0062360:intron | 45.0% | |
| CTCTATGGCGGTCAAAAACA+CGG | - | chr1_2:21733726-21733745 | None:intergenic | 45.0% | |
| !! | GTGTTTTTGACCGCCATAGA+GGG | + | chr1_2:21733725-21733744 | Msa0062360:CDS | 45.0% |
| GCCTTATCTGATGTCGATGA+AGG | + | chr1_2:21733772-21733791 | Msa0062360:CDS | 45.0% | |
| CTCAACAACTTAAGGGGGTT+AGG | + | chr1_2:21733839-21733858 | Msa0062360:CDS | 45.0% | |
| AGGTGATGCATCGCATTTCA+TGG | + | chr1_2:21733894-21733913 | Msa0062360:intron | 45.0% | |
| ATATTGTGGCCCGCATATGA+TGG | - | chr1_2:21734042-21734061 | None:intergenic | 45.0% | |
| GGATAAATACTCCCAAGAGC+AGG | - | chr1_2:21734829-21734848 | None:intergenic | 45.0% | |
| CCCTCTTAGAACTCAGTTGA+TGG | + | chr1_2:21734881-21734900 | Msa0062360:intron | 45.0% | |
| AGTTCCAGTATGACGACATC+AGG | + | chr1_2:21735404-21735423 | Msa0062360:intron | 45.0% | |
| GTTCCAGTATGACGACATCA+GGG | + | chr1_2:21735405-21735424 | Msa0062360:intron | 45.0% | |
| !! | TCTCCATTGGCTTCATGTGA+CGG | + | chr1_2:21735466-21735485 | Msa0062360:intron | 45.0% |
| GGTCACTAGAGAGAGATAGA+TGG | - | chr1_2:21735527-21735546 | None:intergenic | 45.0% | |
| ! | CGACTCCTCCTTTAAAAAGG+TGG | - | chr1_2:21737019-21737038 | None:intergenic | 45.0% |
| AAAGAGCAAACAGACGGACA+CGG | - | chr1_2:21737455-21737474 | None:intergenic | 45.0% | |
| CAATGCAAGGTAAGAGAAGG+GGG | + | chr1_2:21737948-21737967 | Msa0062360:intron | 45.0% | |
| GTGCATAATACCCGCTCTAA+AGG | - | chr1_2:21738130-21738149 | None:intergenic | 45.0% | |
| CACGAAAAAGAAGAGGCAGA+AGG | - | chr1_2:21738161-21738180 | None:intergenic | 45.0% | |
| !! | CTTCTGCCTCTTCTTTTTCG+TGG | + | chr1_2:21738159-21738178 | Msa0062360:intron | 45.0% |
| GAAGAACCGTTCTGCTTCTA+TGG | - | chr1_2:21738209-21738228 | None:intergenic | 45.0% | |
| GCACTTTCAAAAGGGGAATG+AGG | - | chr1_2:21738296-21738315 | None:intergenic | 45.0% | |
| TCCAATCATTGCTCACGACA+TGG | - | chr1_2:21738332-21738351 | None:intergenic | 45.0% | |
| CAAGATTCTCCATCTTGGTG+TGG | - | chr1_2:21738397-21738416 | None:intergenic | 45.0% | |
| GGTAATTGCAAGTATGCCTG+TGG | - | chr1_2:21738614-21738633 | None:intergenic | 45.0% | |
| GCACTCAAGTGAGGACAATA+AGG | - | chr1_2:21738761-21738780 | None:intergenic | 45.0% | |
| ATTGTCCTCACTTGAGTGCT+AGG | + | chr1_2:21738762-21738781 | Msa0062360:intron | 45.0% | |
| ! | CCGTGCATTTGAGATATGTG+GGG | - | chr1_2:21740705-21740724 | None:intergenic | 45.0% |
| CCCCACATATCTCAAATGCA+CGG | + | chr1_2:21740702-21740721 | Msa0062360:intron | 45.0% | |
| TCTCAAATGCACGGTTCAGT+TGG | + | chr1_2:21740711-21740730 | Msa0062360:intron | 45.0% | |
| CTCTTTCCTTTCAGCTGCAA+TGG | + | chr1_2:21741722-21741741 | Msa0062360:intron | 45.0% | |
| GCAAATCCATTGCAGCTGAA+AGG | - | chr1_2:21741731-21741750 | None:intergenic | 45.0% | |
| CCTTAATCAGGTCAGAACCA+TGG | - | chr1_2:21733290-21733309 | None:intergenic | 45.0% | |
| !! | CCATGGTTCTGACCTGATTA+AGG | + | chr1_2:21733287-21733306 | Msa0062360:CDS | 45.0% |
| ! | CCTTGTGTGACGGAAGAAAA+AGG | - | chr1_2:21741913-21741932 | None:intergenic | 45.0% |
| ! | CCTTTTTCTTCCGTCACACA+AGG | + | chr1_2:21741910-21741929 | Msa0062360:intron | 45.0% |
| GGCATTGTAAGACTGGATTC+TGG | + | chr1_2:21741973-21741992 | Msa0062360:intron | 45.0% | |
| ACTGGATTCTGGATGCAGAA+GGG | + | chr1_2:21741984-21742003 | Msa0062360:intron | 45.0% | |
| GCTATCAGAGACATTACTGC+TGG | + | chr1_2:21742008-21742027 | Msa0062360:intron | 45.0% | |
| !! | AGTTTTGATCGCGTTCTGAG+GGG | - | chr1_2:21742090-21742109 | None:intergenic | 45.0% |
| !!! | CTAGTTTTGATCGCGTTCTG+AGG | - | chr1_2:21742092-21742111 | None:intergenic | 45.0% |
| AGAACGCGATCAAAACTAGC+TGG | + | chr1_2:21742093-21742112 | Msa0062360:CDS | 45.0% | |
| CACTCTTGTTAACAACCCTC+AGG | + | chr1_2:21733578-21733597 | Msa0062360:CDS | 45.0% | |
| AGTCTAGATCCATCCCTCTA+GGG | - | chr1_2:21742293-21742312 | None:intergenic | 45.0% | |
| ! | TGGTGACGACTCTAATGACA+AGG | + | chr1_2:21742356-21742375 | Msa0062360:CDS | 45.0% |
| ACTCAGCAACTTAAAGGAGC+TGG | + | chr1_2:21742390-21742409 | Msa0062360:CDS | 45.0% | |
| CTCAGCAACTTAAAGGAGCT+GGG | + | chr1_2:21742391-21742410 | Msa0062360:CDS | 45.0% | |
| TCAGCAACTTAAAGGAGCTG+GGG | + | chr1_2:21742392-21742411 | Msa0062360:CDS | 45.0% | |
| TGGCTTGAGTAGCCATGAAA+CGG | - | chr1_2:21733909-21733928 | None:intergenic | 45.0% | |
| !! | AAAATTTCATAAAAAAATAT+TGG | + | chr1_2:21737619-21737638 | Msa0062360:intron | 5.0% |
| !!! | TTTTTTTATATATTTCTTTT+TGG | + | chr1_2:21739830-21739849 | Msa0062360:intron | 5.0% |
| !!! | TTTTTTATATATTTCTTTTT+GGG | + | chr1_2:21739831-21739850 | Msa0062360:intron | 5.0% |
| !!! | TATATTATTATTTTATTTCA+TGG | + | chr1_2:21740023-21740042 | Msa0062360:intron | 5.0% |
| !! | AAAAAAAAAAAAAATATTAG+TGG | + | chr1_2:21740249-21740268 | Msa0062360:intron | 5.0% |
| !!! | TATTTTAACAATTTATAATT+GGG | - | chr1_2:21740416-21740435 | None:intergenic | 5.0% |
| !!! | TATTTTTATAATTTACAATT+AGG | + | chr1_2:21740616-21740635 | Msa0062360:intron | 5.0% |
| !! | TTCTATAAAAAAAAAAAAAA+AGG | - | chr1_2:21741610-21741629 | None:intergenic | 5.0% |
| ! | GATTTGCTTCCACCTGGTGT+TGG | + | chr1_2:21733192-21733211 | Msa0062360:CDS | 50.0% |
| CTGCCAAAAGTGATGAGCTG+AGG | + | chr1_2:21733397-21733416 | Msa0062360:CDS | 50.0% | |
| ! | CCTCCTCAGCTCATCACTTT+TGG | - | chr1_2:21733403-21733422 | None:intergenic | 50.0% |
| CCAAAAGTGATGAGCTGAGG+AGG | + | chr1_2:21733400-21733419 | Msa0062360:CDS | 50.0% | |
| !! | CTGAGGAGGCATTGTAAGAC+TGG | + | chr1_2:21733414-21733433 | Msa0062360:CDS | 50.0% |
| TGGATGCAGATGGGAGATGT+CGG | + | chr1_2:21733441-21733460 | Msa0062360:CDS | 50.0% | |
| ! | TGTTGGAGCTGATGACGTGT+TGG | + | chr1_2:21733473-21733492 | Msa0062360:CDS | 50.0% |
| !! | CGTGTTTTTGACCGCCATAG+AGG | + | chr1_2:21733724-21733743 | Msa0062360:CDS | 50.0% |
| ! | TTTTGACCGCCATAGAGGGA+TGG | + | chr1_2:21733729-21733748 | Msa0062360:CDS | 50.0% |
| AGTCCAGATCCATCCCTCTA+TGG | - | chr1_2:21733741-21733760 | None:intergenic | 50.0% | |
| GTCGATGAAGGTGATGTTGC+TGG | + | chr1_2:21733784-21733803 | Msa0062360:CDS | 50.0% | |
| TCTGATGAGCAGGCGAATGA+AGG | + | chr1_2:21733814-21733833 | Msa0062360:CDS | 50.0% | |
| !!! | GGCTACTCAAGCCACTTTTC+AGG | + | chr1_2:21733915-21733934 | Msa0062360:intron | 50.0% |
| TTGCCCTGATGTCGTCATAC+TGG | - | chr1_2:21735411-21735430 | None:intergenic | 50.0% | |
| GAGATCAGTGAGTCACATGG+TGG | - | chr1_2:21735498-21735517 | None:intergenic | 50.0% | |
| TCTTGCTGCTGCATGAGTCA+TGG | - | chr1_2:21736182-21736201 | None:intergenic | 50.0% | |
| ! | CTGGCAGTCTACCTTTAGAG+CGG | + | chr1_2:21738116-21738135 | Msa0062360:intron | 50.0% |
| !! | TGGCAGTCTACCTTTAGAGC+GGG | + | chr1_2:21738117-21738136 | Msa0062360:intron | 50.0% |
| ! | GAAGAGGCAGAAGGGTTTTC+AGG | - | chr1_2:21738152-21738171 | None:intergenic | 50.0% |
| TCCTCGTCGGTATAAAGACG+TGG | + | chr1_2:21738256-21738275 | Msa0062360:intron | 50.0% | |
| GCCATGTCGTGAGCAATGAT+TGG | + | chr1_2:21738328-21738347 | Msa0062360:intron | 50.0% | |
| GAAGGTGATCCACACCAAGA+TGG | + | chr1_2:21738385-21738404 | Msa0062360:intron | 50.0% | |
| ! | GAGTGACGCTGTCACTGATT+TGG | - | chr1_2:21738428-21738447 | None:intergenic | 50.0% |
| TCTCGTGCAACCAATTGAGG+TGG | - | chr1_2:21738536-21738555 | None:intergenic | 50.0% | |
| AGCTCTCGTGCAACCAATTG+AGG | - | chr1_2:21738539-21738558 | None:intergenic | 50.0% | |
| GCAAGGTTGTAGCAAACCTG+TGG | - | chr1_2:21738680-21738699 | None:intergenic | 50.0% | |
| AGGAATGTGGCACATGTGCA+AGG | - | chr1_2:21738697-21738716 | None:intergenic | 50.0% | |
| ! | GTTAGCCTAGCACTCAAGTG+AGG | - | chr1_2:21738770-21738789 | None:intergenic | 50.0% |
| ACATCACTTACCCCGACCAA+TGG | + | chr1_2:21738788-21738807 | Msa0062360:intron | 50.0% | |
| TAAGCTTCATAAGAGGGGCG+TGG | - | chr1_2:21741574-21741593 | None:intergenic | 50.0% | |
| ! | GCAATGGATTTGCTTCCACC+TGG | + | chr1_2:21741738-21741757 | Msa0062360:intron | 50.0% |
| ! | GATTTGCTTCCACCTGGTGT+TGG | + | chr1_2:21733192-21733211 | Msa0062360:CDS | 50.0% |
| CTGCCAAAACTGATAAGCCG+AGG | + | chr1_2:21741949-21741968 | Msa0062360:intron | 50.0% | |
| ! | CCTCCTCGGCTTATCAGTTT+TGG | - | chr1_2:21741955-21741974 | None:intergenic | 50.0% |
| CCAAAACTGATAAGCCGAGG+AGG | + | chr1_2:21741952-21741971 | Msa0062360:intron | 50.0% | |
| CCAGTCTTACAATGCCTCCT+CGG | - | chr1_2:21733417-21733436 | None:intergenic | 50.0% | |
| GACTGGATTCTGGATGCAGA+AGG | + | chr1_2:21741983-21742002 | Msa0062360:intron | 50.0% | |
| TGCTGGAGCTGATGAAGTGT+TGG | + | chr1_2:21742025-21742044 | Msa0062360:intron | 50.0% | |
| !! | TGGAGCTGATGAAGTGTTGG+TGG | + | chr1_2:21742028-21742047 | Msa0062360:intron | 50.0% |
| !! | GGAGCTGATGAAGTGTTGGT+GGG | + | chr1_2:21742029-21742048 | Msa0062360:intron | 50.0% |
| !! | CTCTAGGGCGGTCAAAAACA+CGG | - | chr1_2:21742278-21742297 | None:intergenic | 50.0% |
| !! | GTGTTTTTGACCGCCCTAGA+GGG | + | chr1_2:21742277-21742296 | Msa0062360:CDS | 50.0% |
| GAGTCTAGATCCATCCCTCT+AGG | - | chr1_2:21742294-21742313 | None:intergenic | 50.0% | |
| GTAGATGAAGGTGATGCTGC+TGG | + | chr1_2:21742336-21742355 | Msa0062360:CDS | 50.0% | |
| !! | GCTAGTTCTAGTGATGGTGC+TGG | + | chr1_2:21742414-21742433 | Msa0062360:CDS | 50.0% |
| GGCTTGAGTAGCCATGAAAC+GGG | - | chr1_2:21742466-21742485 | None:intergenic | 50.0% | |
| GAAGGGACGAAACCAACACC+AGG | - | chr1_2:21733207-21733226 | None:intergenic | 55.0% | |
| ! | TGGAGCTGATGACGTGTTGG+TGG | + | chr1_2:21733476-21733495 | Msa0062360:CDS | 55.0% |
| ! | GGAGCTGATGACGTGTTGGT+GGG | + | chr1_2:21733477-21733496 | Msa0062360:CDS | 55.0% |
| CCAGATCCATCCCTCTATGG+CGG | - | chr1_2:21733738-21733757 | None:intergenic | 55.0% | |
| ! | TGGTGACGACTCTGATGAGC+AGG | + | chr1_2:21733804-21733823 | Msa0062360:CDS | 55.0% |
| ! | GTTGATGCTGGTGCTGAGCA+AGG | + | chr1_2:21733874-21733893 | Msa0062360:CDS | 55.0% |
| TTGTGGCCCGCATATGATGG+AGG | - | chr1_2:21734039-21734058 | None:intergenic | 55.0% | |
| TGACTGTGTTGTGTCCCACG+TGG | + | chr1_2:21734697-21734716 | Msa0062360:intron | 55.0% | |
| GCACCGTCACATGAAGCCAA+TGG | - | chr1_2:21735472-21735491 | None:intergenic | 55.0% | |
| GGGGAGCTAAACTCAAACCC+AGG | + | chr1_2:21738013-21738032 | Msa0062360:intron | 55.0% | |
| TACCGCACTCTCTTCCTCGT+CGG | + | chr1_2:21738243-21738262 | Msa0062360:intron | 55.0% | |
| TACCGACGAGGAAGAGAGTG+CGG | - | chr1_2:21738248-21738267 | None:intergenic | 55.0% | |
| GCCACGTCTTTATACCGACG+AGG | - | chr1_2:21738260-21738279 | None:intergenic | 55.0% | |
| CAGTGACAGCGTCACTCCAT+TGG | + | chr1_2:21738431-21738450 | Msa0062360:intron | 55.0% | |
| AGGGGATCTTCGAAAGCCAC+AGG | + | chr1_2:21738661-21738680 | Msa0062360:intron | 55.0% | |
| TTGCATCGTATGGCGCGTGA+TGG | + | chr1_2:21741479-21741498 | Msa0062360:intron | 55.0% | |
| !! | CCGAGGAGGCATTGTAAGAC+TGG | + | chr1_2:21741966-21741985 | Msa0062360:intron | 55.0% |
| !! | CGTGTTTTTGACCGCCCTAG+AGG | + | chr1_2:21742276-21742295 | Msa0062360:CDS | 55.0% |
| ! | TTTTGACCGCCCTAGAGGGA+TGG | + | chr1_2:21742281-21742300 | Msa0062360:CDS | 55.0% |
| ! | CTAGATCCATCCCTCTAGGG+CGG | - | chr1_2:21742290-21742309 | None:intergenic | 55.0% |
| !! | GCTGGGGCTAGTTCTAGTGA+TGG | + | chr1_2:21742408-21742427 | Msa0062360:CDS | 55.0% |
| !! | TCTAGTGATGGTGCTGGTGC+TGG | + | chr1_2:21742420-21742439 | Msa0062360:CDS | 55.0% |
| AGGCGATGCATCCCGTTTCA+TGG | + | chr1_2:21742452-21742471 | Msa0062360:CDS | 55.0% | |
| GGGACGAAACCAACACCAGG+TGG | - | chr1_2:21733204-21733223 | None:intergenic | 60.0% | |
| CCGCCATAGAGGGATGGATC+TGG | + | chr1_2:21733735-21733754 | Msa0062360:CDS | 60.0% | |
| CGGCGTCATAGCTTCCACGT+GGG | - | chr1_2:21734714-21734733 | None:intergenic | 60.0% | |
| CCACGTGGAAGCTATGACGC+CGG | + | chr1_2:21734712-21734731 | Msa0062360:intron | 60.0% | |
| GAAGGGACGAAGCCAACACC+AGG | - | chr1_2:21741759-21741778 | None:intergenic | 60.0% | |
| !! | GCTGGTGCTGGTGTTGAGCA+AGG | + | chr1_2:21742432-21742451 | Msa0062360:CDS | 60.0% |
| CCGGCGTCATAGCTTCCACG+TGG | - | chr1_2:21734715-21734734 | None:intergenic | 65.0% | |
| GGGACGAAGCCAACACCAGG+TGG | - | chr1_2:21741756-21741775 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 21733189 | 21742494 | 21733189 | ID=Msa0062360;Name=Msa0062360 |
| chr1_2 | mRNA | 21733189 | 21742494 | 21733189 | ID=Msa0062360-mRNA-1;Parent=Msa0062360;Name=Msa0062360-mRNA-1;_AED=0.21;_eAED=0.28;_QI=0|0|0|0.8|0.75|0.6|5|0|294 |
| chr1_2 | exon | 21733189 | 21733355 | 21733189 | ID=Msa0062360-mRNA-1:exon:8085;Parent=Msa0062360-mRNA-1 |
| chr1_2 | exon | 21733380 | 21733599 | 21733380 | ID=Msa0062360-mRNA-1:exon:8086;Parent=Msa0062360-mRNA-1 |
| chr1_2 | exon | 21733706 | 21733895 | 21733706 | ID=Msa0062360-mRNA-1:exon:8087;Parent=Msa0062360-mRNA-1 |
| chr1_2 | exon | 21742081 | 21742151 | 21742081 | ID=Msa0062360-mRNA-1:exon:8088;Parent=Msa0062360-mRNA-1 |
| chr1_2 | exon | 21742258 | 21742494 | 21742258 | ID=Msa0062360-mRNA-1:exon:8089;Parent=Msa0062360-mRNA-1 |
| chr1_2 | CDS | 21733189 | 21733355 | 21733189 | ID=Msa0062360-mRNA-1:cds;Parent=Msa0062360-mRNA-1 |
| chr1_2 | CDS | 21733380 | 21733599 | 21733380 | ID=Msa0062360-mRNA-1:cds;Parent=Msa0062360-mRNA-1 |
| chr1_2 | CDS | 21733706 | 21733895 | 21733706 | ID=Msa0062360-mRNA-1:cds;Parent=Msa0062360-mRNA-1 |
| chr1_2 | CDS | 21742081 | 21742151 | 21742081 | ID=Msa0062360-mRNA-1:cds;Parent=Msa0062360-mRNA-1 |
| chr1_2 | CDS | 21742258 | 21742494 | 21742258 | ID=Msa0062360-mRNA-1:cds;Parent=Msa0062360-mRNA-1 |
| Gene Sequence |
| Protein sequence |
