Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0066430 | XP_003588383.1 | 90.672 | 268 | 21 | 2 | 1 | 264 | 1 | 268 | 3.24e-166 | 473 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0066430 | sp|P69781|GAT12_ARATH | 51.337 | 187 | 76 | 5 | 93 | 264 | 67 | 253 | 7.13e-50 | 169 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0066430 | G7IB47 | 90.672 | 268 | 21 | 2 | 1 | 264 | 1 | 268 | 1.55e-166 | 473 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0066430 | TF | C2C2-GATA |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0066430 | MtrunA17_Chr1g0146231 | 90.672 | 268 | 21 | 2 | 1 | 264 | 1 | 268 | 2.98e-170 | 473 |
| Msa0066430 | MtrunA17_Chr3g0140331 | 48.178 | 247 | 100 | 7 | 19 | 264 | 68 | 287 | 1.23e-61 | 198 |
| Msa0066430 | MtrunA17_Chr8g0340401 | 41.569 | 255 | 107 | 10 | 23 | 264 | 35 | 260 | 2.16e-45 | 155 |
| Msa0066430 | MtrunA17_Chr8g0372291 | 41.420 | 169 | 81 | 5 | 96 | 264 | 102 | 252 | 1.37e-25 | 102 |
| Msa0066430 | MtrunA17_Chr4g0035891 | 29.964 | 277 | 131 | 11 | 5 | 264 | 15 | 245 | 3.78e-24 | 98.6 |
| Msa0066430 | MtrunA17_Chr3g0145121 | 32.402 | 179 | 103 | 3 | 87 | 264 | 88 | 249 | 4.23e-22 | 93.2 |
| Msa0066430 | MtrunA17_Chr5g0404981 | 38.974 | 195 | 85 | 7 | 94 | 264 | 150 | 334 | 3.68e-21 | 91.7 |
| Msa0066430 | MtrunA17_Chr6g0461591 | 33.333 | 198 | 97 | 7 | 101 | 264 | 30 | 226 | 2.12e-20 | 87.8 |
| Msa0066430 | MtrunA17_Chr1g0199671 | 31.095 | 283 | 135 | 11 | 27 | 264 | 9 | 276 | 2.51e-19 | 85.9 |
| Msa0066430 | MtrunA17_Chr1g0213161 | 61.404 | 57 | 21 | 1 | 209 | 264 | 130 | 186 | 8.69e-16 | 74.7 |
| Msa0066430 | MtrunA17_Chr7g0253101 | 34.759 | 187 | 84 | 8 | 107 | 264 | 45 | 222 | 1.09e-15 | 74.7 |
| Msa0066430 | MtrunA17_Chr1g0169431 | 80.556 | 36 | 7 | 0 | 229 | 264 | 171 | 206 | 2.53e-15 | 73.6 |
| Msa0066430 | MtrunA17_Chr5g0395391 | 60.870 | 46 | 18 | 0 | 219 | 264 | 259 | 304 | 4.97e-14 | 70.9 |
| Msa0066430 | MtrunA17_Chr5g0395391 | 75.000 | 36 | 9 | 0 | 229 | 264 | 167 | 202 | 3.75e-13 | 68.6 |
| Msa0066430 | MtrunA17_Chr2g0326771 | 74.286 | 35 | 9 | 0 | 230 | 264 | 216 | 250 | 1.18e-13 | 69.7 |
| Msa0066430 | MtrunA17_Chr4g0028961 | 71.429 | 35 | 10 | 0 | 230 | 264 | 232 | 266 | 8.53e-13 | 67.0 |
| Msa0066430 | MtrunA17_Chr7g0271861 | 71.875 | 32 | 9 | 0 | 232 | 263 | 24 | 55 | 4.94e-11 | 58.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0066430 | AT5G25830.1 | 51.337 | 187 | 76 | 5 | 93 | 264 | 67 | 253 | 7.24e-51 | 169 |
| Msa0066430 | AT4G32890.1 | 38.610 | 259 | 101 | 6 | 21 | 264 | 16 | 231 | 2.45e-44 | 152 |
| Msa0066430 | AT3G60530.1 | 36.994 | 173 | 65 | 5 | 93 | 264 | 63 | 192 | 2.02e-23 | 95.9 |
| Msa0066430 | AT2G45050.1 | 34.359 | 195 | 68 | 7 | 89 | 264 | 60 | 213 | 2.13e-21 | 90.9 |
| Msa0066430 | AT5G66320.2 | 37.129 | 202 | 97 | 6 | 84 | 264 | 91 | 283 | 3.30e-21 | 91.7 |
| Msa0066430 | AT5G66320.1 | 37.129 | 202 | 97 | 6 | 84 | 264 | 91 | 283 | 3.30e-21 | 91.7 |
| Msa0066430 | AT4G36240.1 | 30.556 | 252 | 103 | 8 | 22 | 264 | 10 | 198 | 1.17e-18 | 82.8 |
| Msa0066430 | AT4G34680.1 | 30.723 | 166 | 71 | 4 | 99 | 264 | 93 | 214 | 4.00e-17 | 79.3 |
| Msa0066430 | AT4G34680.2 | 30.723 | 166 | 71 | 4 | 99 | 264 | 93 | 214 | 4.00e-17 | 79.3 |
| Msa0066430 | AT3G24050.1 | 77.778 | 36 | 8 | 0 | 229 | 264 | 193 | 228 | 1.64e-14 | 72.0 |
| Msa0066430 | AT3G54810.1 | 77.143 | 35 | 8 | 0 | 230 | 264 | 229 | 263 | 1.23e-13 | 70.1 |
| Msa0066430 | AT3G54810.2 | 77.143 | 35 | 8 | 0 | 230 | 264 | 229 | 263 | 1.23e-13 | 70.1 |
| Msa0066430 | AT1G08010.2 | 70.000 | 40 | 12 | 0 | 225 | 264 | 215 | 254 | 1.25e-13 | 69.7 |
| Msa0066430 | AT1G08010.1 | 70.000 | 40 | 12 | 0 | 225 | 264 | 215 | 254 | 1.25e-13 | 69.7 |
| Msa0066430 | AT1G08010.3 | 70.000 | 40 | 12 | 0 | 225 | 264 | 215 | 254 | 1.25e-13 | 69.7 |
| Msa0066430 | AT1G08000.2 | 70.000 | 40 | 12 | 0 | 225 | 264 | 213 | 252 | 3.27e-12 | 65.9 |
| Msa0066430 | AT1G08000.1 | 70.000 | 40 | 12 | 0 | 225 | 264 | 213 | 252 | 3.27e-12 | 65.9 |
| Msa0066430 | AT3G51080.1 | 74.286 | 35 | 9 | 0 | 230 | 264 | 221 | 255 | 6.35e-12 | 65.1 |
| Msa0066430 | AT2G28340.1 | 72.727 | 33 | 9 | 0 | 232 | 264 | 193 | 225 | 2.16e-11 | 63.2 |
Find 93 sgRNAs with CRISPR-Local
Find 242 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGTCACTGTCCTTTCTTCT+TGG | 0.072854 | 1_2:-30062448 | None:intergenic |
| AAAACGATTCCTCACCAATA+TGG | 0.265150 | 1_2:-30062135 | None:intergenic |
| TCAAAAGATGCAACTGATAT+CGG | 0.281999 | 1_2:+30062171 | Msa0066430:CDS |
| CCAATCTCAGGAACGACATT+AGG | 0.287162 | 1_2:-30061549 | None:intergenic |
| GCAGTCTTTGCCTGCTTCCT+TGG | 0.291400 | 1_2:-30062424 | None:intergenic |
| TATATTCAACAAGGAAGTTT+TGG | 0.298704 | 1_2:+30062258 | Msa0066430:CDS |
| AACAGTGATGGTGGGTAAGG+TGG | 0.335978 | 1_2:-30062401 | None:intergenic |
| CTCCGGAGACCTGTGTGTTC+CGG | 0.345236 | 1_2:+30061599 | Msa0066430:CDS |
| AAAACTTCCTTGTTGAATAT+AGG | 0.362486 | 1_2:-30062256 | None:intergenic |
| AAGACGCCACAATGGCGAAC+TGG | 0.366662 | 1_2:+30062517 | Msa0066430:CDS |
| CTGGAATGGATTTCCCATAT+TGG | 0.368181 | 1_2:+30062121 | Msa0066430:CDS |
| TGTTGAATATAGGACTGTTT+CGG | 0.382615 | 1_2:-30062246 | None:intergenic |
| AGGACTGTTTCGGTTGGGTT+GGG | 0.406165 | 1_2:-30062236 | None:intergenic |
| ACAGTGATGGTGGGTAAGGT+GGG | 0.409706 | 1_2:-30062400 | None:intergenic |
| CAATGGCGAACTGGGCCTAA+TGG | 0.413863 | 1_2:+30062526 | Msa0066430:CDS |
| CACACAGGTCTCCGGAGAAA+TGG | 0.416213 | 1_2:-30061593 | None:intergenic |
| AGTGATGGTGGGTAAGGTGG+GGG | 0.432383 | 1_2:-30062398 | None:intergenic |
| CCTAATGTCGTTCCTGAGAT+TGG | 0.439413 | 1_2:+30061549 | Msa0066430:CDS |
| CAATCTCAGGAACGACATTA+GGG | 0.440367 | 1_2:-30061548 | None:intergenic |
| GTTGGGTTGGGAAAACTCAC+GGG | 0.441489 | 1_2:-30062224 | None:intergenic |
| TGTCGGAGGAAAAGGTGGTT+TGG | 0.443866 | 1_2:-30061347 | None:intergenic |
| AAGGACAGTGACAGAGGGTC+AGG | 0.447495 | 1_2:+30062457 | Msa0066430:CDS |
| AAACGATTCCTCACCAATAT+GGG | 0.454989 | 1_2:-30062134 | None:intergenic |
| AATATAGGACTGTTTCGGTT+GGG | 0.459476 | 1_2:-30062241 | None:intergenic |
| GACGGTAACGGTGGAGGAGG+AGG | 0.462615 | 1_2:-30061487 | None:intergenic |
| TAGGACTGTTTCGGTTGGGT+TGG | 0.462649 | 1_2:-30062237 | None:intergenic |
| AGTGTTGTTGTCGGAGGAAA+AGG | 0.462952 | 1_2:-30061355 | None:intergenic |
| GTCTTGCTACGGGCCTTAGC+TGG | 0.467254 | 1_2:-30062283 | None:intergenic |
| CAGTGATGGTGGGTAAGGTG+GGG | 0.469936 | 1_2:-30062399 | None:intergenic |
| CAATATGGGAAATCCATTCC+AGG | 0.475930 | 1_2:-30062120 | None:intergenic |
| GGTTGGGTTGGGAAAACTCA+CGG | 0.477268 | 1_2:-30062225 | None:intergenic |
| AGACGCCACAATGGCGAACT+GGG | 0.479058 | 1_2:+30062518 | Msa0066430:CDS |
| GAATATAGGACTGTTTCGGT+TGG | 0.481982 | 1_2:-30062242 | None:intergenic |
| GCCCACGAGTCGTCTTGCTA+CGG | 0.485531 | 1_2:-30062294 | None:intergenic |
| GTTAGCTCGTCATCATTGTC+CGG | 0.486841 | 1_2:+30061519 | Msa0066430:CDS |
| ATGATTTAGCGGACCTGGAA+TGG | 0.488654 | 1_2:+30062107 | Msa0066430:CDS |
| CAAAAGATGCAACTGATATC+GGG | 0.494290 | 1_2:+30062172 | Msa0066430:CDS |
| TGGAACAGTGATGGTGGGTA+AGG | 0.497331 | 1_2:-30062404 | None:intergenic |
| AAATTATGACAGCCAATCTC+AGG | 0.499118 | 1_2:-30061561 | None:intergenic |
| ACTCACGGGGTTCTTCATCC+TGG | 0.499456 | 1_2:-30062210 | None:intergenic |
| GGTAACGGTGGAGGAGGAGG+CGG | 0.506455 | 1_2:-30061484 | None:intergenic |
| GGTGGTTTGGAAAATGTTGT+TGG | 0.508256 | 1_2:-30061334 | None:intergenic |
| GACGCGAGCTCCAGTCGCAA+GGG | 0.513095 | 1_2:-30062318 | None:intergenic |
| GCCCGTAGCAAGACGACTCG+TGG | 0.513167 | 1_2:+30062292 | Msa0066430:CDS |
| CTGCTTCCTTGGAACAGTGA+TGG | 0.515550 | 1_2:-30062413 | None:intergenic |
| CTTCCTTGGAACAGTGATGG+TGG | 0.517171 | 1_2:-30062410 | None:intergenic |
| TACCGACAATTTCATTGTTG+AGG | 0.524862 | 1_2:+30061377 | Msa0066430:CDS |
| TACCGGAACACACAGGTCTC+CGG | 0.525459 | 1_2:-30061601 | None:intergenic |
| GACAGAGGGTCAGGTGGAGA+TGG | 0.529838 | 1_2:+30062466 | Msa0066430:CDS |
| CCCACGAGTCGTCTTGCTAC+GGG | 0.530121 | 1_2:-30062293 | None:intergenic |
| GAAATAGGAGGATGATTTAG+CGG | 0.531282 | 1_2:+30062096 | Msa0066430:intron |
| GGAGGATGATTTAGCGGACC+TGG | 0.539293 | 1_2:+30062102 | Msa0066430:intron |
| GTTGTTGTCGGAGGAAAAGG+TGG | 0.541025 | 1_2:-30061352 | None:intergenic |
| TTCAGACACCAACCTTGACT+CGG | 0.541209 | 1_2:+30061446 | Msa0066430:CDS |
| CATCACTGTTCCAAGGAAGC+AGG | 0.548837 | 1_2:+30062414 | Msa0066430:CDS |
| GACAGTGACAGAGGGTCAGG+TGG | 0.552397 | 1_2:+30062460 | Msa0066430:CDS |
| AAAGACTGCTCCAAGAAGAA+AGG | 0.555772 | 1_2:+30062438 | Msa0066430:CDS |
| GACGACGGTAACGGTGGAGG+AGG | 0.558507 | 1_2:-30061490 | None:intergenic |
| AGACGCGAGCTCCAGTCGCA+AGG | 0.560513 | 1_2:-30062319 | None:intergenic |
| GTCCTCAACAATGAAATTGT+CGG | 0.566137 | 1_2:-30061379 | None:intergenic |
| GCAACTGATATCGGGCATGA+AGG | 0.569194 | 1_2:+30062180 | Msa0066430:CDS |
| AAGGTTGGTGTCTGAAATGA+TGG | 0.569728 | 1_2:-30061439 | None:intergenic |
| TTGTGGCGTAAGATATAAGT+CGG | 0.570468 | 1_2:+30062570 | Msa0066430:CDS |
| GGGCATGAAGGTGCAAAACC+AGG | 0.581432 | 1_2:+30062192 | Msa0066430:CDS |
| AACGCTATTGACGACGGTAA+CGG | 0.582703 | 1_2:-30061499 | None:intergenic |
| ATTGACGACGGTAACGGTGG+AGG | 0.582861 | 1_2:-30061493 | None:intergenic |
| TTAGGCCCAGTTCGCCATTG+TGG | 0.583433 | 1_2:-30062523 | None:intergenic |
| TTAGCTCGTCATCATTGTCC+GGG | 0.587117 | 1_2:+30061520 | Msa0066430:CDS |
| AGTTGCATGTGGCCGAGTCA+AGG | 0.589310 | 1_2:-30061458 | None:intergenic |
| ATTCCCTACGTAGGAATGGA+AGG | 0.590186 | 1_2:+30061306 | None:intergenic |
| ATTGTCGGTAGTGTTGTTGT+CGG | 0.590207 | 1_2:-30061364 | None:intergenic |
| GTCGGTAGTGTTGTTGTCGG+AGG | 0.590547 | 1_2:-30061361 | None:intergenic |
| GGTCAGGTGGAGATGGTCAG+AGG | 0.591680 | 1_2:+30062473 | Msa0066430:CDS |
| CCCGTAGCAAGACGACTCGT+GGG | 0.597264 | 1_2:+30062293 | Msa0066430:CDS |
| AGAAGAAAGGACAGTGACAG+AGG | 0.599067 | 1_2:+30062451 | Msa0066430:CDS |
| AACGACATTAGGGTCGCACC+CGG | 0.603894 | 1_2:-30061538 | None:intergenic |
| GAAGAAAGGACAGTGACAGA+GGG | 0.618694 | 1_2:+30062452 | Msa0066430:CDS |
| ACGCGAGCTCCAGTCGCAAG+GGG | 0.622679 | 1_2:-30062317 | None:intergenic |
| ATGGATTTCCCATATTGGTG+AGG | 0.624760 | 1_2:+30062126 | Msa0066430:CDS |
| AAAACATTATGCAATGCTTG+TGG | 0.626014 | 1_2:+30062553 | Msa0066430:CDS |
| TTCCTTGGAACAGTGATGGT+GGG | 0.626349 | 1_2:-30062409 | None:intergenic |
| TGTGGCGTAAGATATAAGTC+GGG | 0.628107 | 1_2:+30062571 | Msa0066430:CDS |
| TACCCACCATCACTGTTCCA+AGG | 0.636192 | 1_2:+30062407 | Msa0066430:CDS |
| GCTATTGACGACGGTAACGG+TGG | 0.637591 | 1_2:-30061496 | None:intergenic |
| GCATGTGGCCGAGTCAAGGT+TGG | 0.642676 | 1_2:-30061454 | None:intergenic |
| GGAGGCGGTTGAGTTGCATG+TGG | 0.669629 | 1_2:-30061469 | None:intergenic |
| TGACAGACAAGACGCCACAA+TGG | 0.677162 | 1_2:+30062509 | Msa0066430:CDS |
| AGTTCTGACTCAGAAGAAGA+CGG | 0.679246 | 1_2:-30062364 | None:intergenic |
| TATAATATACCGGAACACAC+AGG | 0.691414 | 1_2:-30061608 | None:intergenic |
| CGCGAGCTCCAGTCGCAAGG+GGG | 0.693828 | 1_2:-30062316 | None:intergenic |
| AAACAGTCCTATATTCAACA+AGG | 0.707758 | 1_2:+30062249 | Msa0066430:CDS |
| TTGGGTTGGGAAAACTCACG+GGG | 0.715974 | 1_2:-30062223 | None:intergenic |
| CGAGCTAACGCTATTGACGA+CGG | 0.724527 | 1_2:-30061505 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CATATACACATATAATATAC+CGG | - | chr1_2:30061621-30061640 | None:intergenic | 20.0% |
| !!! | TTTTGTGATACTCAATAATT+TGG | - | chr1_2:30061923-30061942 | None:intergenic | 20.0% |
| !!! | TTTGTGTTGAAATTTGAAAT+AGG | + | chr1_2:30062081-30062100 | Msa0066430:intron | 20.0% |
| !! | CATATACACATATAATATAC+CGG | - | chr1_2:30061621-30061640 | None:intergenic | 20.0% |
| !!! | TTTTGTGATACTCAATAATT+TGG | - | chr1_2:30061923-30061942 | None:intergenic | 20.0% |
| !!! | TTTGTGTTGAAATTTGAAAT+AGG | + | chr1_2:30062081-30062100 | Msa0066430:intron | 20.0% |
| !! | TCATGAGTTAGAAATTTTCA+TGG | - | chr1_2:30061737-30061756 | None:intergenic | 25.0% |
| ! | CTGAAATTATTGGCAAAAAA+GGG | - | chr1_2:30061805-30061824 | None:intergenic | 25.0% |
| !!! | GTTTTTTCACCTGAAATTAT+TGG | - | chr1_2:30061815-30061834 | None:intergenic | 25.0% |
| ! | TAGGCTAAATACAACAAAAT+GGG | + | chr1_2:30061842-30061861 | Msa0066430:intron | 25.0% |
| ! | AAAACTTCCTTGTTGAATAT+AGG | - | chr1_2:30062259-30062278 | None:intergenic | 25.0% |
| !! | TATATTCAACAAGGAAGTTT+TGG | + | chr1_2:30062258-30062277 | Msa0066430:CDS | 25.0% |
| !!! | AAGCATTGCATAATGTTTTT+GGG | - | chr1_2:30062552-30062571 | None:intergenic | 25.0% |
| !! | TCATGAGTTAGAAATTTTCA+TGG | - | chr1_2:30061737-30061756 | None:intergenic | 25.0% |
| ! | CTGAAATTATTGGCAAAAAA+GGG | - | chr1_2:30061805-30061824 | None:intergenic | 25.0% |
| !!! | GTTTTTTCACCTGAAATTAT+TGG | - | chr1_2:30061815-30061834 | None:intergenic | 25.0% |
| ! | TAGGCTAAATACAACAAAAT+GGG | + | chr1_2:30061842-30061861 | Msa0066430:intron | 25.0% |
| ! | AAAACTTCCTTGTTGAATAT+AGG | - | chr1_2:30062259-30062278 | None:intergenic | 25.0% |
| !! | TATATTCAACAAGGAAGTTT+TGG | + | chr1_2:30062258-30062277 | Msa0066430:CDS | 25.0% |
| !!! | AAGCATTGCATAATGTTTTT+GGG | - | chr1_2:30062552-30062571 | None:intergenic | 25.0% |
| TTTCATGGAACTAACAGAAA+AGG | - | chr1_2:30061722-30061741 | None:intergenic | 30.0% | |
| CCTGAAATTATTGGCAAAAA+AGG | - | chr1_2:30061806-30061825 | None:intergenic | 30.0% | |
| !!! | CCTTTTTTGCCAATAATTTC+AGG | + | chr1_2:30061803-30061822 | Msa0066430:intron | 30.0% |
| CTAGGCTAAATACAACAAAA+TGG | + | chr1_2:30061841-30061860 | Msa0066430:intron | 30.0% | |
| AGGCTAAATACAACAAAATG+GGG | + | chr1_2:30061843-30061862 | Msa0066430:intron | 30.0% | |
| ! | TGTTTCAAGAGCATATATAG+AGG | + | chr1_2:30062043-30062062 | Msa0066430:intron | 30.0% |
| ! | GTGTTGAAATTTGAAATAGG+AGG | + | chr1_2:30062084-30062103 | Msa0066430:intron | 30.0% |
| TCAAAAGATGCAACTGATAT+CGG | + | chr1_2:30062171-30062190 | Msa0066430:CDS | 30.0% | |
| TGTTGAATATAGGACTGTTT+CGG | - | chr1_2:30062249-30062268 | None:intergenic | 30.0% | |
| AAACAGTCCTATATTCAACA+AGG | + | chr1_2:30062249-30062268 | Msa0066430:CDS | 30.0% | |
| !! | CAAGCATTGCATAATGTTTT+TGG | - | chr1_2:30062553-30062572 | None:intergenic | 30.0% |
| AAAACATTATGCAATGCTTG+TGG | + | chr1_2:30062553-30062572 | Msa0066430:CDS | 30.0% | |
| TTTCATGGAACTAACAGAAA+AGG | - | chr1_2:30061722-30061741 | None:intergenic | 30.0% | |
| CCTGAAATTATTGGCAAAAA+AGG | - | chr1_2:30061806-30061825 | None:intergenic | 30.0% | |
| !!! | CCTTTTTTGCCAATAATTTC+AGG | + | chr1_2:30061803-30061822 | Msa0066430:intron | 30.0% |
| CTAGGCTAAATACAACAAAA+TGG | + | chr1_2:30061841-30061860 | Msa0066430:intron | 30.0% | |
| AGGCTAAATACAACAAAATG+GGG | + | chr1_2:30061843-30061862 | Msa0066430:intron | 30.0% | |
| ! | TGTTTCAAGAGCATATATAG+AGG | + | chr1_2:30062043-30062062 | Msa0066430:intron | 30.0% |
| ! | GTGTTGAAATTTGAAATAGG+AGG | + | chr1_2:30062084-30062103 | Msa0066430:intron | 30.0% |
| TCAAAAGATGCAACTGATAT+CGG | + | chr1_2:30062171-30062190 | Msa0066430:CDS | 30.0% | |
| TGTTGAATATAGGACTGTTT+CGG | - | chr1_2:30062249-30062268 | None:intergenic | 30.0% | |
| AAACAGTCCTATATTCAACA+AGG | + | chr1_2:30062249-30062268 | Msa0066430:CDS | 30.0% | |
| !! | CAAGCATTGCATAATGTTTT+TGG | - | chr1_2:30062553-30062572 | None:intergenic | 30.0% |
| AAAACATTATGCAATGCTTG+TGG | + | chr1_2:30062553-30062572 | Msa0066430:CDS | 30.0% | |
| TACCGACAATTTCATTGTTG+AGG | + | chr1_2:30061377-30061396 | Msa0066430:CDS | 35.0% | |
| GTCCTCAACAATGAAATTGT+CGG | - | chr1_2:30061382-30061401 | None:intergenic | 35.0% | |
| AAATTATGACAGCCAATCTC+AGG | - | chr1_2:30061564-30061583 | None:intergenic | 35.0% | |
| TATAATATACCGGAACACAC+AGG | - | chr1_2:30061611-30061630 | None:intergenic | 35.0% | |
| AGGTGAAAAAACAACTAGCT+AGG | + | chr1_2:30061823-30061842 | Msa0066430:intron | 35.0% | |
| GAAATAGGAGGATGATTTAG+CGG | + | chr1_2:30062096-30062115 | Msa0066430:intron | 35.0% | |
| AAACGATTCCTCACCAATAT+GGG | - | chr1_2:30062137-30062156 | None:intergenic | 35.0% | |
| AAAACGATTCCTCACCAATA+TGG | - | chr1_2:30062138-30062157 | None:intergenic | 35.0% | |
| CAAAAGATGCAACTGATATC+GGG | + | chr1_2:30062172-30062191 | Msa0066430:CDS | 35.0% | |
| AATATAGGACTGTTTCGGTT+GGG | - | chr1_2:30062244-30062263 | None:intergenic | 35.0% | |
| !!! | CATAATGTTTTTGGGCCATT+AGG | - | chr1_2:30062544-30062563 | None:intergenic | 35.0% |
| TTGTGGCGTAAGATATAAGT+CGG | + | chr1_2:30062570-30062589 | Msa0066430:CDS | 35.0% | |
| TACCGACAATTTCATTGTTG+AGG | + | chr1_2:30061377-30061396 | Msa0066430:CDS | 35.0% | |
| GTCCTCAACAATGAAATTGT+CGG | - | chr1_2:30061382-30061401 | None:intergenic | 35.0% | |
| AAATTATGACAGCCAATCTC+AGG | - | chr1_2:30061564-30061583 | None:intergenic | 35.0% | |
| TATAATATACCGGAACACAC+AGG | - | chr1_2:30061611-30061630 | None:intergenic | 35.0% | |
| AGGTGAAAAAACAACTAGCT+AGG | + | chr1_2:30061823-30061842 | Msa0066430:intron | 35.0% | |
| GAAATAGGAGGATGATTTAG+CGG | + | chr1_2:30062096-30062115 | Msa0066430:intron | 35.0% | |
| AAACGATTCCTCACCAATAT+GGG | - | chr1_2:30062137-30062156 | None:intergenic | 35.0% | |
| AAAACGATTCCTCACCAATA+TGG | - | chr1_2:30062138-30062157 | None:intergenic | 35.0% | |
| CAAAAGATGCAACTGATATC+GGG | + | chr1_2:30062172-30062191 | Msa0066430:CDS | 35.0% | |
| AATATAGGACTGTTTCGGTT+GGG | - | chr1_2:30062244-30062263 | None:intergenic | 35.0% | |
| !!! | CATAATGTTTTTGGGCCATT+AGG | - | chr1_2:30062544-30062563 | None:intergenic | 35.0% |
| TTGTGGCGTAAGATATAAGT+CGG | + | chr1_2:30062570-30062589 | Msa0066430:CDS | 35.0% | |
| ! | GGTGGTTTGGAAAATGTTGT+TGG | - | chr1_2:30061337-30061356 | None:intergenic | 40.0% |
| ! | ATTGTCGGTAGTGTTGTTGT+CGG | - | chr1_2:30061367-30061386 | None:intergenic | 40.0% |
| !!! | CGTCATTTTTGAGGTTAAGG+AGG | - | chr1_2:30061404-30061423 | None:intergenic | 40.0% |
| !!! | CGACGTCATTTTTGAGGTTA+AGG | - | chr1_2:30061407-30061426 | None:intergenic | 40.0% |
| !! | AAGGTTGGTGTCTGAAATGA+TGG | - | chr1_2:30061442-30061461 | None:intergenic | 40.0% |
| CAATCTCAGGAACGACATTA+GGG | - | chr1_2:30061551-30061570 | None:intergenic | 40.0% | |
| ! | TTTTCTGACAGCCATTTCTC+CGG | + | chr1_2:30061582-30061601 | Msa0066430:CDS | 40.0% |
| ACAAAATGGGGCACATTTCA+CGG | + | chr1_2:30061855-30061874 | Msa0066430:intron | 40.0% | |
| CAATATGGGAAATCCATTCC+AGG | - | chr1_2:30062123-30062142 | None:intergenic | 40.0% | |
| ! | CTGGAATGGATTTCCCATAT+TGG | + | chr1_2:30062121-30062140 | Msa0066430:CDS | 40.0% |
| ATGGATTTCCCATATTGGTG+AGG | + | chr1_2:30062126-30062145 | Msa0066430:CDS | 40.0% | |
| GAATATAGGACTGTTTCGGT+TGG | - | chr1_2:30062245-30062264 | None:intergenic | 40.0% | |
| ! | AGTTCTGACTCAGAAGAAGA+CGG | - | chr1_2:30062367-30062386 | None:intergenic | 40.0% |
| AAAGACTGCTCCAAGAAGAA+AGG | + | chr1_2:30062438-30062457 | Msa0066430:CDS | 40.0% | |
| TGTGGCGTAAGATATAAGTC+GGG | + | chr1_2:30062571-30062590 | Msa0066430:CDS | 40.0% | |
| ! | GGTGGTTTGGAAAATGTTGT+TGG | - | chr1_2:30061337-30061356 | None:intergenic | 40.0% |
| ! | ATTGTCGGTAGTGTTGTTGT+CGG | - | chr1_2:30061367-30061386 | None:intergenic | 40.0% |
| !!! | CGTCATTTTTGAGGTTAAGG+AGG | - | chr1_2:30061404-30061423 | None:intergenic | 40.0% |
| !!! | CGACGTCATTTTTGAGGTTA+AGG | - | chr1_2:30061407-30061426 | None:intergenic | 40.0% |
| !! | AAGGTTGGTGTCTGAAATGA+TGG | - | chr1_2:30061442-30061461 | None:intergenic | 40.0% |
| CAATCTCAGGAACGACATTA+GGG | - | chr1_2:30061551-30061570 | None:intergenic | 40.0% | |
| ! | TTTTCTGACAGCCATTTCTC+CGG | + | chr1_2:30061582-30061601 | Msa0066430:CDS | 40.0% |
| ACAAAATGGGGCACATTTCA+CGG | + | chr1_2:30061855-30061874 | Msa0066430:intron | 40.0% | |
| CAATATGGGAAATCCATTCC+AGG | - | chr1_2:30062123-30062142 | None:intergenic | 40.0% | |
| ! | CTGGAATGGATTTCCCATAT+TGG | + | chr1_2:30062121-30062140 | Msa0066430:CDS | 40.0% |
| ATGGATTTCCCATATTGGTG+AGG | + | chr1_2:30062126-30062145 | Msa0066430:CDS | 40.0% | |
| GAATATAGGACTGTTTCGGT+TGG | - | chr1_2:30062245-30062264 | None:intergenic | 40.0% | |
| ! | AGTTCTGACTCAGAAGAAGA+CGG | - | chr1_2:30062367-30062386 | None:intergenic | 40.0% |
| AAAGACTGCTCCAAGAAGAA+AGG | + | chr1_2:30062438-30062457 | Msa0066430:CDS | 40.0% | |
| TGTGGCGTAAGATATAAGTC+GGG | + | chr1_2:30062571-30062590 | Msa0066430:CDS | 40.0% | |
| ! | AGTGTTGTTGTCGGAGGAAA+AGG | - | chr1_2:30061358-30061377 | None:intergenic | 45.0% |
| !!! | CATCGTCGACGTCATTTTTG+AGG | - | chr1_2:30061413-30061432 | None:intergenic | 45.0% |
| TTCAGACACCAACCTTGACT+CGG | + | chr1_2:30061446-30061465 | Msa0066430:CDS | 45.0% | |
| AACGCTATTGACGACGGTAA+CGG | - | chr1_2:30061502-30061521 | None:intergenic | 45.0% | |
| GTTAGCTCGTCATCATTGTC+CGG | + | chr1_2:30061519-30061538 | Msa0066430:CDS | 45.0% | |
| TTAGCTCGTCATCATTGTCC+GGG | + | chr1_2:30061520-30061539 | Msa0066430:CDS | 45.0% | |
| CCAATCTCAGGAACGACATT+AGG | - | chr1_2:30061552-30061571 | None:intergenic | 45.0% | |
| CCTAATGTCGTTCCTGAGAT+TGG | + | chr1_2:30061549-30061568 | Msa0066430:CDS | 45.0% | |
| ! | ATGATTTAGCGGACCTGGAA+TGG | + | chr1_2:30062107-30062126 | Msa0066430:CDS | 45.0% |
| !! | TGAGGAATCGTTTTCAAGCG+AGG | + | chr1_2:30062144-30062163 | Msa0066430:CDS | 45.0% |
| !!! | GGAAGTTTTGGTTCCAGCTA+AGG | + | chr1_2:30062270-30062289 | Msa0066430:CDS | 45.0% |
| TTCCTTGGAACAGTGATGGT+GGG | - | chr1_2:30062412-30062431 | None:intergenic | 45.0% | |
| CTGTCACTGTCCTTTCTTCT+TGG | - | chr1_2:30062451-30062470 | None:intergenic | 45.0% | |
| AGAAGAAAGGACAGTGACAG+AGG | + | chr1_2:30062451-30062470 | Msa0066430:CDS | 45.0% | |
| GAAGAAAGGACAGTGACAGA+GGG | + | chr1_2:30062452-30062471 | Msa0066430:CDS | 45.0% | |
| ! | AGTGTTGTTGTCGGAGGAAA+AGG | - | chr1_2:30061358-30061377 | None:intergenic | 45.0% |
| !!! | CATCGTCGACGTCATTTTTG+AGG | - | chr1_2:30061413-30061432 | None:intergenic | 45.0% |
| TTCAGACACCAACCTTGACT+CGG | + | chr1_2:30061446-30061465 | Msa0066430:CDS | 45.0% | |
| AACGCTATTGACGACGGTAA+CGG | - | chr1_2:30061502-30061521 | None:intergenic | 45.0% | |
| GTTAGCTCGTCATCATTGTC+CGG | + | chr1_2:30061519-30061538 | Msa0066430:CDS | 45.0% | |
| TTAGCTCGTCATCATTGTCC+GGG | + | chr1_2:30061520-30061539 | Msa0066430:CDS | 45.0% | |
| CCAATCTCAGGAACGACATT+AGG | - | chr1_2:30061552-30061571 | None:intergenic | 45.0% | |
| CCTAATGTCGTTCCTGAGAT+TGG | + | chr1_2:30061549-30061568 | Msa0066430:CDS | 45.0% | |
| ! | ATGATTTAGCGGACCTGGAA+TGG | + | chr1_2:30062107-30062126 | Msa0066430:CDS | 45.0% |
| !! | TGAGGAATCGTTTTCAAGCG+AGG | + | chr1_2:30062144-30062163 | Msa0066430:CDS | 45.0% |
| !!! | GGAAGTTTTGGTTCCAGCTA+AGG | + | chr1_2:30062270-30062289 | Msa0066430:CDS | 45.0% |
| TTCCTTGGAACAGTGATGGT+GGG | - | chr1_2:30062412-30062431 | None:intergenic | 45.0% | |
| CTGTCACTGTCCTTTCTTCT+TGG | - | chr1_2:30062451-30062470 | None:intergenic | 45.0% | |
| AGAAGAAAGGACAGTGACAG+AGG | + | chr1_2:30062451-30062470 | Msa0066430:CDS | 45.0% | |
| GAAGAAAGGACAGTGACAGA+GGG | + | chr1_2:30062452-30062471 | Msa0066430:CDS | 45.0% | |
| TGTCGGAGGAAAAGGTGGTT+TGG | - | chr1_2:30061350-30061369 | None:intergenic | 50.0% | |
| GTTGTTGTCGGAGGAAAAGG+TGG | - | chr1_2:30061355-30061374 | None:intergenic | 50.0% | |
| CGAGCTAACGCTATTGACGA+CGG | - | chr1_2:30061508-30061527 | None:intergenic | 50.0% | |
| GCAACTGATATCGGGCATGA+AGG | + | chr1_2:30062180-30062199 | Msa0066430:CDS | 50.0% | |
| !! | TTGGGTTGGGAAAACTCACG+GGG | - | chr1_2:30062226-30062245 | None:intergenic | 50.0% |
| !! | GTTGGGTTGGGAAAACTCAC+GGG | - | chr1_2:30062227-30062246 | None:intergenic | 50.0% |
| !! | GGTTGGGTTGGGAAAACTCA+CGG | - | chr1_2:30062228-30062247 | None:intergenic | 50.0% |
| AGGACTGTTTCGGTTGGGTT+GGG | - | chr1_2:30062239-30062258 | None:intergenic | 50.0% | |
| TAGGACTGTTTCGGTTGGGT+TGG | - | chr1_2:30062240-30062259 | None:intergenic | 50.0% | |
| !! | ACAGTGATGGTGGGTAAGGT+GGG | - | chr1_2:30062403-30062422 | None:intergenic | 50.0% |
| !! | AACAGTGATGGTGGGTAAGG+TGG | - | chr1_2:30062404-30062423 | None:intergenic | 50.0% |
| !! | TGGAACAGTGATGGTGGGTA+AGG | - | chr1_2:30062407-30062426 | None:intergenic | 50.0% |
| TACCCACCATCACTGTTCCA+AGG | + | chr1_2:30062407-30062426 | Msa0066430:CDS | 50.0% | |
| CTTCCTTGGAACAGTGATGG+TGG | - | chr1_2:30062413-30062432 | None:intergenic | 50.0% | |
| CTGCTTCCTTGGAACAGTGA+TGG | - | chr1_2:30062416-30062435 | None:intergenic | 50.0% | |
| CATCACTGTTCCAAGGAAGC+AGG | + | chr1_2:30062414-30062433 | Msa0066430:CDS | 50.0% | |
| TGACAGACAAGACGCCACAA+TGG | + | chr1_2:30062509-30062528 | Msa0066430:CDS | 50.0% | |
| TGTCGGAGGAAAAGGTGGTT+TGG | - | chr1_2:30061350-30061369 | None:intergenic | 50.0% | |
| GTTGTTGTCGGAGGAAAAGG+TGG | - | chr1_2:30061355-30061374 | None:intergenic | 50.0% | |
| CGAGCTAACGCTATTGACGA+CGG | - | chr1_2:30061508-30061527 | None:intergenic | 50.0% | |
| GCAACTGATATCGGGCATGA+AGG | + | chr1_2:30062180-30062199 | Msa0066430:CDS | 50.0% | |
| !! | TTGGGTTGGGAAAACTCACG+GGG | - | chr1_2:30062226-30062245 | None:intergenic | 50.0% |
| !! | GTTGGGTTGGGAAAACTCAC+GGG | - | chr1_2:30062227-30062246 | None:intergenic | 50.0% |
| !! | GGTTGGGTTGGGAAAACTCA+CGG | - | chr1_2:30062228-30062247 | None:intergenic | 50.0% |
| AGGACTGTTTCGGTTGGGTT+GGG | - | chr1_2:30062239-30062258 | None:intergenic | 50.0% | |
| TAGGACTGTTTCGGTTGGGT+TGG | - | chr1_2:30062240-30062259 | None:intergenic | 50.0% | |
| !! | ACAGTGATGGTGGGTAAGGT+GGG | - | chr1_2:30062403-30062422 | None:intergenic | 50.0% |
| !! | AACAGTGATGGTGGGTAAGG+TGG | - | chr1_2:30062404-30062423 | None:intergenic | 50.0% |
| !! | TGGAACAGTGATGGTGGGTA+AGG | - | chr1_2:30062407-30062426 | None:intergenic | 50.0% |
| TACCCACCATCACTGTTCCA+AGG | + | chr1_2:30062407-30062426 | Msa0066430:CDS | 50.0% | |
| CTTCCTTGGAACAGTGATGG+TGG | - | chr1_2:30062413-30062432 | None:intergenic | 50.0% | |
| CTGCTTCCTTGGAACAGTGA+TGG | - | chr1_2:30062416-30062435 | None:intergenic | 50.0% | |
| CATCACTGTTCCAAGGAAGC+AGG | + | chr1_2:30062414-30062433 | Msa0066430:CDS | 50.0% | |
| TGACAGACAAGACGCCACAA+TGG | + | chr1_2:30062509-30062528 | Msa0066430:CDS | 50.0% | |
| ! | GTCGGTAGTGTTGTTGTCGG+AGG | - | chr1_2:30061364-30061383 | None:intergenic | 55.0% |
| AGTTGCATGTGGCCGAGTCA+AGG | - | chr1_2:30061461-30061480 | None:intergenic | 55.0% | |
| ! | ATTGACGACGGTAACGGTGG+AGG | - | chr1_2:30061496-30061515 | None:intergenic | 55.0% |
| ! | GCTATTGACGACGGTAACGG+TGG | - | chr1_2:30061499-30061518 | None:intergenic | 55.0% |
| AACGACATTAGGGTCGCACC+CGG | - | chr1_2:30061541-30061560 | None:intergenic | 55.0% | |
| CACACAGGTCTCCGGAGAAA+TGG | - | chr1_2:30061596-30061615 | None:intergenic | 55.0% | |
| TACCGGAACACACAGGTCTC+CGG | - | chr1_2:30061604-30061623 | None:intergenic | 55.0% | |
| ! | GGAGGATGATTTAGCGGACC+TGG | + | chr1_2:30062102-30062121 | Msa0066430:intron | 55.0% |
| ! | GGGCATGAAGGTGCAAAACC+AGG | + | chr1_2:30062192-30062211 | Msa0066430:CDS | 55.0% |
| ACTCACGGGGTTCTTCATCC+TGG | - | chr1_2:30062213-30062232 | None:intergenic | 55.0% | |
| GTAAGGTGGGGGTGGGAATA+AGG | - | chr1_2:30062390-30062409 | None:intergenic | 55.0% | |
| !! | AGTGATGGTGGGTAAGGTGG+GGG | - | chr1_2:30062401-30062420 | None:intergenic | 55.0% |
| !! | CAGTGATGGTGGGTAAGGTG+GGG | - | chr1_2:30062402-30062421 | None:intergenic | 55.0% |
| GCAGTCTTTGCCTGCTTCCT+TGG | - | chr1_2:30062427-30062446 | None:intergenic | 55.0% | |
| AAGGACAGTGACAGAGGGTC+AGG | + | chr1_2:30062457-30062476 | Msa0066430:CDS | 55.0% | |
| AAGACGCCACAATGGCGAAC+TGG | + | chr1_2:30062517-30062536 | Msa0066430:CDS | 55.0% | |
| AGACGCCACAATGGCGAACT+GGG | + | chr1_2:30062518-30062537 | Msa0066430:CDS | 55.0% | |
| TTAGGCCCAGTTCGCCATTG+TGG | - | chr1_2:30062526-30062545 | None:intergenic | 55.0% | |
| CAATGGCGAACTGGGCCTAA+TGG | + | chr1_2:30062526-30062545 | Msa0066430:CDS | 55.0% | |
| ! | GTCGGTAGTGTTGTTGTCGG+AGG | - | chr1_2:30061364-30061383 | None:intergenic | 55.0% |
| AGTTGCATGTGGCCGAGTCA+AGG | - | chr1_2:30061461-30061480 | None:intergenic | 55.0% | |
| ! | ATTGACGACGGTAACGGTGG+AGG | - | chr1_2:30061496-30061515 | None:intergenic | 55.0% |
| ! | GCTATTGACGACGGTAACGG+TGG | - | chr1_2:30061499-30061518 | None:intergenic | 55.0% |
| AACGACATTAGGGTCGCACC+CGG | - | chr1_2:30061541-30061560 | None:intergenic | 55.0% | |
| CACACAGGTCTCCGGAGAAA+TGG | - | chr1_2:30061596-30061615 | None:intergenic | 55.0% | |
| TACCGGAACACACAGGTCTC+CGG | - | chr1_2:30061604-30061623 | None:intergenic | 55.0% | |
| ! | GGAGGATGATTTAGCGGACC+TGG | + | chr1_2:30062102-30062121 | Msa0066430:intron | 55.0% |
| ! | GGGCATGAAGGTGCAAAACC+AGG | + | chr1_2:30062192-30062211 | Msa0066430:CDS | 55.0% |
| ACTCACGGGGTTCTTCATCC+TGG | - | chr1_2:30062213-30062232 | None:intergenic | 55.0% | |
| GTAAGGTGGGGGTGGGAATA+AGG | - | chr1_2:30062390-30062409 | None:intergenic | 55.0% | |
| !! | AGTGATGGTGGGTAAGGTGG+GGG | - | chr1_2:30062401-30062420 | None:intergenic | 55.0% |
| !! | CAGTGATGGTGGGTAAGGTG+GGG | - | chr1_2:30062402-30062421 | None:intergenic | 55.0% |
| GCAGTCTTTGCCTGCTTCCT+TGG | - | chr1_2:30062427-30062446 | None:intergenic | 55.0% | |
| AAGGACAGTGACAGAGGGTC+AGG | + | chr1_2:30062457-30062476 | Msa0066430:CDS | 55.0% | |
| AAGACGCCACAATGGCGAAC+TGG | + | chr1_2:30062517-30062536 | Msa0066430:CDS | 55.0% | |
| AGACGCCACAATGGCGAACT+GGG | + | chr1_2:30062518-30062537 | Msa0066430:CDS | 55.0% | |
| TTAGGCCCAGTTCGCCATTG+TGG | - | chr1_2:30062526-30062545 | None:intergenic | 55.0% | |
| CAATGGCGAACTGGGCCTAA+TGG | + | chr1_2:30062526-30062545 | Msa0066430:CDS | 55.0% | |
| GCATGTGGCCGAGTCAAGGT+TGG | - | chr1_2:30061457-30061476 | None:intergenic | 60.0% | |
| ! | GGAGGCGGTTGAGTTGCATG+TGG | - | chr1_2:30061472-30061491 | None:intergenic | 60.0% |
| CTCCGGAGACCTGTGTGTTC+CGG | + | chr1_2:30061599-30061618 | Msa0066430:CDS | 60.0% | |
| GTCTTGCTACGGGCCTTAGC+TGG | - | chr1_2:30062286-30062305 | None:intergenic | 60.0% | |
| CCCACGAGTCGTCTTGCTAC+GGG | - | chr1_2:30062296-30062315 | None:intergenic | 60.0% | |
| CCCGTAGCAAGACGACTCGT+GGG | + | chr1_2:30062293-30062312 | Msa0066430:CDS | 60.0% | |
| GCCCACGAGTCGTCTTGCTA+CGG | - | chr1_2:30062297-30062316 | None:intergenic | 60.0% | |
| !! | ATGGTGGGTAAGGTGGGGGT+GGG | - | chr1_2:30062397-30062416 | None:intergenic | 60.0% |
| GACAGTGACAGAGGGTCAGG+TGG | + | chr1_2:30062460-30062479 | Msa0066430:CDS | 60.0% | |
| GACAGAGGGTCAGGTGGAGA+TGG | + | chr1_2:30062466-30062485 | Msa0066430:CDS | 60.0% | |
| GGTCAGGTGGAGATGGTCAG+AGG | + | chr1_2:30062473-30062492 | Msa0066430:CDS | 60.0% | |
| GCATGTGGCCGAGTCAAGGT+TGG | - | chr1_2:30061457-30061476 | None:intergenic | 60.0% | |
| ! | GGAGGCGGTTGAGTTGCATG+TGG | - | chr1_2:30061472-30061491 | None:intergenic | 60.0% |
| CTCCGGAGACCTGTGTGTTC+CGG | + | chr1_2:30061599-30061618 | Msa0066430:CDS | 60.0% | |
| GTCTTGCTACGGGCCTTAGC+TGG | - | chr1_2:30062286-30062305 | None:intergenic | 60.0% | |
| CCCACGAGTCGTCTTGCTAC+GGG | - | chr1_2:30062296-30062315 | None:intergenic | 60.0% | |
| CCCGTAGCAAGACGACTCGT+GGG | + | chr1_2:30062293-30062312 | Msa0066430:CDS | 60.0% | |
| GCCCACGAGTCGTCTTGCTA+CGG | - | chr1_2:30062297-30062316 | None:intergenic | 60.0% | |
| !! | ATGGTGGGTAAGGTGGGGGT+GGG | - | chr1_2:30062397-30062416 | None:intergenic | 60.0% |
| GACAGTGACAGAGGGTCAGG+TGG | + | chr1_2:30062460-30062479 | Msa0066430:CDS | 60.0% | |
| GACAGAGGGTCAGGTGGAGA+TGG | + | chr1_2:30062466-30062485 | Msa0066430:CDS | 60.0% | |
| GGTCAGGTGGAGATGGTCAG+AGG | + | chr1_2:30062473-30062492 | Msa0066430:CDS | 60.0% | |
| ! | GGTAACGGTGGAGGAGGAGG+CGG | - | chr1_2:30061487-30061506 | None:intergenic | 65.0% |
| ! | GACGGTAACGGTGGAGGAGG+AGG | - | chr1_2:30061490-30061509 | None:intergenic | 65.0% |
| ! | GACGACGGTAACGGTGGAGG+AGG | - | chr1_2:30061493-30061512 | None:intergenic | 65.0% |
| GCCCGTAGCAAGACGACTCG+TGG | + | chr1_2:30062292-30062311 | Msa0066430:CDS | 65.0% | |
| ACGCGAGCTCCAGTCGCAAG+GGG | - | chr1_2:30062320-30062339 | None:intergenic | 65.0% | |
| GACGCGAGCTCCAGTCGCAA+GGG | - | chr1_2:30062321-30062340 | None:intergenic | 65.0% | |
| AGACGCGAGCTCCAGTCGCA+AGG | - | chr1_2:30062322-30062341 | None:intergenic | 65.0% | |
| !! | GATGGTGGGTAAGGTGGGGG+TGG | - | chr1_2:30062398-30062417 | None:intergenic | 65.0% |
| ! | GGTAACGGTGGAGGAGGAGG+CGG | - | chr1_2:30061487-30061506 | None:intergenic | 65.0% |
| ! | GACGGTAACGGTGGAGGAGG+AGG | - | chr1_2:30061490-30061509 | None:intergenic | 65.0% |
| ! | GACGACGGTAACGGTGGAGG+AGG | - | chr1_2:30061493-30061512 | None:intergenic | 65.0% |
| GCCCGTAGCAAGACGACTCG+TGG | + | chr1_2:30062292-30062311 | Msa0066430:CDS | 65.0% | |
| ACGCGAGCTCCAGTCGCAAG+GGG | - | chr1_2:30062320-30062339 | None:intergenic | 65.0% | |
| GACGCGAGCTCCAGTCGCAA+GGG | - | chr1_2:30062321-30062340 | None:intergenic | 65.0% | |
| AGACGCGAGCTCCAGTCGCA+AGG | - | chr1_2:30062322-30062341 | None:intergenic | 65.0% | |
| !! | GATGGTGGGTAAGGTGGGGG+TGG | - | chr1_2:30062398-30062417 | None:intergenic | 65.0% |
| CGCGAGCTCCAGTCGCAAGG+GGG | - | chr1_2:30062319-30062338 | None:intergenic | 70.0% | |
| CGCGAGCTCCAGTCGCAAGG+GGG | - | chr1_2:30062319-30062338 | None:intergenic | 70.0% | |
| CTCGTGGGCCCCCTTGCGAC+TGG | + | chr1_2:30062308-30062327 | Msa0066430:CDS | 75.0% | |
| CTCGTGGGCCCCCTTGCGAC+TGG | + | chr1_2:30062308-30062327 | Msa0066430:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 30061321 | 30062597 | 30061321 | ID=Msa0066430;Name=Msa0066430 |
| chr1_2 | mRNA | 30061321 | 30062597 | 30061321 | ID=Msa0066430-mRNA-1;Parent=Msa0066430;Name=Msa0066430-mRNA-1;_AED=0.18;_eAED=0.18;_QI=0|0|0|1|1|1|2|0|264 |
| chr1_2 | exon | 30061321 | 30061620 | 30061321 | ID=Msa0066430-mRNA-1:exon:10034;Parent=Msa0066430-mRNA-1 |
| chr1_2 | exon | 30062103 | 30062597 | 30062103 | ID=Msa0066430-mRNA-1:exon:10035;Parent=Msa0066430-mRNA-1 |
| chr1_2 | CDS | 30061321 | 30061620 | 30061321 | ID=Msa0066430-mRNA-1:cds;Parent=Msa0066430-mRNA-1 |
| chr1_2 | CDS | 30062103 | 30062597 | 30062103 | ID=Msa0066430-mRNA-1:cds;Parent=Msa0066430-mRNA-1 |
| Gene Sequence |
| Protein sequence |
